id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-324395-v5uiuhih	Lemmin, Thomas	Glycosylator: a Python framework for the rapid modeling of glycans	2019-10-22		.txt	text/plain	3573	230	52	RESULTS: Here, we present Glycosylator, a Python framework for the identification, modeling and modification of glycans in protein structure that can be used directly in a Python script through its application programming interface (API) or through its graphical user interface (GUI). The GUI provides a straightforward two-dimensional (2D) rendering of a glycoprotein that allows for a quick visual inspection of the glycosylation state of all the sequons on a protein structure. Finally, Glycan Reader recognizes most types of glycans and their chemical modifications found in the Protein Data Bank (PDB), which are all available in the CHARMM force field [22] . The Glycosylator framework is composed of 7 classes, several of which can be employed as standalone instances for other applications in molecular modeling (Additional file 1: Figure S1 in the Supporting Information (SI) section). A Molecule can be instantiated directly with a 3D structure (PDB) or using a MoleculeBuilder instance and the topology information provided for the CHARMM force field [22] .	./cache/cord-324395-v5uiuhih.txt	./txt/cord-324395-v5uiuhih.txt