How About Machine Learning Enhancing Theses?


    
      
      
        
          
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            How About Machine Learning Enhancing Theses?
          
          

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    Theses most similar to Computational regulatory genomics : motifs, networks, and dynamics (Kheradpour, Pouya; 2012) read it

  

  
  
    
      
        
          
            
              Predicting genetic interactions in Caenorhabditis elegans using machine learning

              
              
                Missiuro, Patrycja Vasilyev, 1976-
               (2010)
              

            

            
              	
                  Advisors: 
                    Hui Ge; 
                  
                    Jaakkola, Tommi S. (Tommi Sakari)
                  
                
	
                  
                    Department of Electrical Engineering and Computer Science
                  
                


            

            
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              Leveraging high-throughput datasets for studies of gene regulation

              
              
                Yen, Angela
               (2011)
              

            

            
              	
                  Advisor: 
                    Manolis Kellis
                  
                
	
                  
                    Department of Electrical Engineering and Computer Science
                  
                


            

            
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              RNA : algorithms, evolution and design

              
              
                Schnall-Levin, Michael (Michael Benjamin)
               (2011)
              

            

            
              	
                  Advisor: 
                    Bonnie Berger
                  
                
	
                  
                    Department of Mathematics
                  
                


            

            
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              Computational methods for high-throughput pooled genetic experiments

              
              
                Edwards, Matthew Douglas
               (2011)
              

            

            
              	
                  Advisor: 
                    David K. Gifford
                  
                
	
                  
                    Department of Electrical Engineering and Computer Science
                  
                


            

            
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              Identifying protein-coding genes and synonymous constraint elements using phylogenetic codon models

              
              
                Lin, Michael F. (Michael Fong-Jay)
               (2012)
              

            

            
              	
                  Advisor: 
                    Manolis Kellis
                  
                
	
                  
                    Department of Electrical Engineering and Computer Science
                  
                


            

            
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              Simultaneous computational discovery of DNA regulatory motifs and transcription factor binding constraints at high spatial resolution

              
              
                Guo, Yuchun
               (2012)
              

            

            
              	
                  Advisor: 
                    David K. Gifford
                  
                
	
                  
                    Computational and Systems Biology Program
                  
                


            

            
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              Uncovering the variability, regulatory roles and mutation rates of short tandem repeats

              
              
                Willems, Thomas F. (Thomas Frederick)
               (2016)
              

            

            
              	
                  Advisors: 
                    Manolis Kellis; 
                  
                    Yaniv Erlic
                  
                
	
                  
                    Computational and Systems Biology Program
                  
                


            

            
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              Information-sharing models for computational genetics

              
              
                Edwards, Matthew Douglas
               (2016)
              

            

            
              	
                  Advisor: 
                    David K. Gifford
                  
                
	
                  
                    Department of Electrical Engineering and Computer Science
                  
                


            

            
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              Deciphering genetic associations using genome-wide epigenomics approaches

              
              
                Wang, Xinche
               (2017)
              

            

            
              	
                  Advisors: 
                    Laurie A. Boyer; 
                  
                    Manolis Kellis
                  
                
	
                  
                    Department of Biology
                  
                


            

            
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              Convergence of regulatory mutations into oncogenic pathways across multiple tumor types

              
              
                Murugadoss, Karthik
               (2017)
              

            

            
              	
                  Advisor: 
                    Manolis Kellis
                  
                
	
                  
                    Computation for Design and Optimization Program
                  
                


            

            
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