id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-305054-4d84b2g6	Liu, Yuan	The selection of reference genome and the search for the origin of SARS-CoV-2	2020-08-11		.txt	text/plain	2166	140	60	The assembly obtained using RaTG13 as reference showed better statistics in total length and N50 than the assembly guided by SARS-CoV-2, indicating that RaTG13 maybe a better reference for assembling CoV in pangolin or other potential intermediate hosts. Zhang, Wu, and Zhang [13] re-analyzed the RNA-Seq reads from two pangolins carrying coronavirus using reference-guided de novo assembly method, with Wuhan-Hu-1 as the reference genome. They also performed RNA sequencing in five archived pangolins samples from Guangdong, and assembled the genomes using WIV04, another SARS-CoV-2 genome from human, as reference genome. Using de novo assembly method, they obtained viral genome that showed 90.32% and 90.24% of whole genome identify to Wuhan-Hu-1and Bat-CoV RaTG13, respectively. RaTG13, which is a bat CoV, had 1,287 reads mapped to it, and the resulting assembly has total length of 21,925 and N50 of 1,428.	./cache/cord-305054-4d84b2g6.txt	./txt/cord-305054-4d84b2g6.txt