Summary of your 'study carrel' ============================== This is a summary of your Distant Reader 'study carrel'. The Distant Reader harvested & cached your content into a collection/corpus. It then applied sets of natural language processing and text mining against the collection. The results of this process was reduced to a database file -- a 'study carrel'. The study carrel can then be queried, thus bringing light specific characteristics for your collection. These characteristics can help you summarize the collection as well as enumerate things you might want to investigate more closely. This report is a terse narrative report, and when processing is complete you will be linked to a more complete narrative report. Eric Lease Morgan Number of items in the collection; 'How big is my corpus?' ---------------------------------------------------------- 4 Average length of all items measured in words; "More or less, how big is each item?" ------------------------------------------------------------------------------------ 1916 Average readability score of all items (0 = difficult; 100 = easy) ------------------------------------------------------------------ 42 Top 50 statistically significant keywords; "What is my collection about?" ------------------------------------------------------------------------- 1 malaria 1 influenza 1 infection 1 fever 1 dna 1 RSV Top 50 lemmatized nouns; "What is discussed?" --------------------------------------------- 57 infection 56 disease 43 virus 39 influenza 31 fever 27 malaria 26 patient 26 % 23 illness 17 human 16 year 16 sequence 16 microbe 15 risk 15 child 15 cause 13 infant 13 film 13 day 13 blood 12 vaccine 12 treatment 12 figure 12 diagnosis 12 antibody 11 transmission 11 pneumonia 11 host 11 dna 10 vaccination 10 syndrome 10 individual 10 hospital 10 epidemic 10 drug 10 bite 10 age 9 tract 9 tissue 9 test 9 subtype 9 liver 9 feature 9 approach 9 adult 9 acid 8 symptom 8 serology 8 response 8 pathogen Top 50 proper nouns; "What are the names of persons or places?" -------------------------------------------------------------- 37 RSV 27 • 9 Africa 8 SARS 6 East 6 Asia 5 bacillary 5 angiomatosis 5 UK 5 South 5 Leucopenia 5 HIV 5 B. 4 PCR 4 Fever 4 C 3 sha 3 RNA 3 DOI 3 CoV 3 Bartonella 3 America 3 Abstract 3 A 2 sera 2 leucocytosis 2 henselae 2 haemagglutinin 2 granulomata 2 dysplasia 2 Worldwide 2 Whipple 2 Thrombocytopenia 2 TB 2 Plasmodium 2 P. 2 Neuraminidase 2 National 2 Middle 2 LRTIs 2 Kaposi 2 Figure 2 Eosinophilia 2 David 2 Central 2 B 2 16S 1 zanamivir 1 www.promedmail.org/ 1 whipplei Top 50 personal pronouns nouns; "To whom are things referred?" ------------------------------------------------------------- 11 it 7 they 3 we 2 them 1 you 1 us 1 she 1 he Top 50 lemmatized verbs; "What do things do?" --------------------------------------------- 260 be 43 have 23 use 20 cause 13 include 12 identify 11 suggest 11 associate 10 occur 8 know 8 infect 8 detect 8 base 7 return 7 require 7 exclude 7 develop 7 contain 6 present 6 neutralize 6 make 6 consider 6 circulate 5 think 5 prevent 5 arise 5 allow 4 suspect 4 see 4 lead 4 last 4 increase 4 import 4 find 4 do 4 cultivate 4 bear 4 affect 3 transmit 3 target 3 show 3 repeat 3 relate 3 reduce 3 raise 3 limit 3 improve 3 ensue 3 emerge 3 describe Top 50 lemmatized adjectives and adverbs; "How are things described?" --------------------------------------------------------------------- 37 respiratory 22 viral 21 severe 21 more 21 - 19 not 18 microbial 18 human 16 novel 16 high 16 clinical 16 acute 14 also 13 about 12 most 11 infectious 10 likely 9 usually 9 nucleic 9 many 9 early 8 only 8 later 8 bacterial 7 pre 7 particularly 7 immunocompromised 7 elderly 6 worldwide 6 unique 6 several 6 other 6 major 6 less 6 last 6 immune 6 domestic 6 different 6 characteristic 5 upper 5 syncytial 5 recently 5 persistent 5 often 5 negative 5 little 5 however 5 general 5 first 5 few Top 50 lemmatized superlative adjectives; "How are things described to the extreme?" ------------------------------------------------------------------------- 4 most 4 great 2 high 1 least 1 early 1 Most 1 -ch Top 50 lemmatized superlative adverbs; "How do things do to the extreme?" ------------------------------------------------------------------------ 8 most 2 least 1 well Top 50 Internet domains; "What Webbed places are alluded to in this corpus?" ---------------------------------------------------------------------------- Top 50 URLs; "What is hyperlinked from this corpus?" ---------------------------------------------------- Top 50 email addresses; "Who are you gonna call?" ------------------------------------------------- Top 50 positive assertions; "What sentences are in the shape of noun-verb-noun?" ------------------------------------------------------------------------------- 2 disease requires more 1 % develop pneumonia 1 antibodies are now 1 causes are usually 1 disease occur less 1 disease was not 1 fever are seldom 1 fever is often 1 film is negative 1 films are less 1 illness including laryngotracheitis 1 illness is seldom 1 infants are more 1 infection are not 1 infection has very 1 infection is often 1 infections including severe 1 influenza have only 1 malaria are essential 1 malaria developing more 1 malaria is possible 1 risk is important 1 rsv is beneficial 1 rsv is complex 1 rsv is primarily 1 transmission was respiratory 1 vaccines used worldwide 1 virus has not 1 viruses are small 1 viruses occur naturally Top 50 negative assertions; "What sentences are in the shape of noun-verb-no|not-noun?" --------------------------------------------------------------------------------------- 1 infection are not necessarily A rudimentary bibliography -------------------------- id = cord-252266-8o4kte9i author = Beeching, Nick title = Fever in the returning traveller date = 2005-07-01 keywords = fever; malaria summary = The quality of pre-travel advice and vaccinations, adherence to chemoprophylaxis against malaria, avoidance of insect bites and general behaviour abroad (including sexual history) are also important. Initial investigations should include adequate malaria films (supplemented by quick antigen detection tests in many laboratories) and blood count, repeated as necessary, blood, urine and faecal cultures, serum biochemistry, chest radiography and other imaging (e.g. liver ultrasonography) as indicated. Worldwide, but mainly tropics Persistent fever, right upper Neutrophil leucocytosis, abdominal pain and tenderness, ultrasonography of liver, serology signs at right lung base African trypanosomiasis Visitors to African game parks, Chancre at bite site, tachycardia, Hypoglycaemia, thrombocytopenia, tsetse fly lymphadenopathy, splenomegaly, thick blood films, serology, consider transient oedema, variable rashes CSF examination only after obtaining expert advice Falciparum malaria must be excluded, and is the diagnosis in 65-75% of patients hospitalized after visiting Sub-Saharan Africa, compared with 15-25% of those returning from Asia, who are more likely to have dengue fever. doi = 10.1383/medc.2005.33.7.3 id = cord-298183-cisrvghj author = Fredricks, David N title = The infectious aetiology of disease: the search for new agents date = 2005-03-01 keywords = dna summary = The hypothesis that a disease has an infectious cause is supported by: clinical features (similar to those of known infectious diseases, e.g. fever, leucocytosis), epidemiology (case clustering in time or location), histology (inflammation of affected tissues, e.g. granulomata) or characteristic microbial structures, treatment (clinical response to antimicrobial treatment), and prevention of disease by vaccines targeting microbial antigens. Many of the recently discovered microbial pathogens were identified by detecting their unique nucleic acid sequences in tissues. A unique 16S rDNA sequence was detected in the tissues of three patients with bacillary angiomatosis but not in control tissues, identifying a bacterium in the Bartonella genus as a cause of a the disease. Several sequence-based approaches to pathogen discovery have yielded novel microbes that cause human disease. Future attempts to identify novel microbes associated with human disease may use other sequence-based approaches. Future attempts to identify novel microbes associated with human disease may use other sequence-based approaches. doi = 10.1383/medc.33.3.37.61122 id = cord-324301-bzrh2fni author = Zambon, Maria title = Influenza, respiratory syncytial virus and SARS date = 2005-05-01 keywords = RSV; infection; influenza summary = The recent emergence of the SARS coronavirus in the human population in 2003, with an ensuing global epidemic affecting more than 8000 individuals with a case fatality of about 10%, underlines the fact that respiratory viral infections of humans may originate in animals, and that many different influenza A viruses also occur naturally in animal reservoirs, representing a constant threat of zoonotic infections of humans and ensuing global pandemics. About 30-50% of acute LRTIs are viral in origin; of these, influenza and respiratory syncytial virus (RSV) are associated with the greatest disease burden in humans. About 30-50% of acute LRTIs are viral in origin; of these, influenza and respiratory syncytial virus (RSV) are associated with the greatest disease burden in humans. Seasonal illness, epidemics and pandemics -influenza viruses circulating in humans (A H1N1, H3N2, B and C) cause respiratory tract disease. doi = 10.1383/medc.33.5.130.64960