id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-342921-lpn6cqz3	Leguia, Mariana	Full Genomic Characterization of a Saffold Virus Isolated in Peru	2015-11-20		.txt	text/plain	2158	117	48	Here, we provide complete genomic characterization of a SAFV-3 isolate collected from a two-year-old female from the Amazonian area of Maynas, in Loreto, Peru. To maintain sampling diversity as large as possible, trees were constructed using publicly available reference sequences that represent the totality of the diversity of SAFV strains in terms of genotype, year of isolation, and geographical origin ( Table 1 ). Phylogenetic analyses of both full genome and complete VP1 sequences confirm that the Peruvian SAFV strain collected in 2012 belongs to genotype 3 and is most closely related to Asian strains ( Figure 2 ). To cover as many genotypes, years, and geographical regions as possible, we considered 34 complete genomes (at least 6888 nt covering all 2296 aa of representative SAFV1-11 isolates, including the Peruvian isolate), 17 complete VP1 sequences (810 nt covering all 270 aa), and seven additional partial VP1 sequences (at least 312 nt) specifically from the Americas.	./cache/cord-342921-lpn6cqz3.txt	./txt/cord-342921-lpn6cqz3.txt