id sid tid token lemma pos cord-339886-th1da1bb 1 1 key key NN cord-339886-th1da1bb 1 2 : : : cord-339886-th1da1bb 2 1 cord-339886-th1da1bb cord-339886-th1da1bb NNP cord-339886-th1da1bb 2 2 authors author NNS cord-339886-th1da1bb 2 3 : : : cord-339886-th1da1bb 2 4 Gardy Gardy NNP cord-339886-th1da1bb 2 5 , , , cord-339886-th1da1bb 2 6 Jennifer Jennifer NNP cord-339886-th1da1bb 2 7 L. L. NNP cord-339886-th1da1bb 2 8 ; ; : cord-339886-th1da1bb 2 9 Loman Loman NNP cord-339886-th1da1bb 2 10 , , , cord-339886-th1da1bb 2 11 Nicholas Nicholas NNP cord-339886-th1da1bb 2 12 J. J. NNP cord-339886-th1da1bb 2 13 title title NN cord-339886-th1da1bb 2 14 : : : cord-339886-th1da1bb 2 15 Towards towards IN cord-339886-th1da1bb 2 16 a a DT cord-339886-th1da1bb 2 17 genomics genomics NN cord-339886-th1da1bb 2 18 - - HYPH cord-339886-th1da1bb 2 19 informed inform VBN cord-339886-th1da1bb 2 20 , , , cord-339886-th1da1bb 2 21 real real JJ cord-339886-th1da1bb 2 22 - - HYPH cord-339886-th1da1bb 2 23 time time NN cord-339886-th1da1bb 2 24 , , , cord-339886-th1da1bb 2 25 global global JJ cord-339886-th1da1bb 2 26 pathogen pathogen NN cord-339886-th1da1bb 2 27 surveillance surveillance NN cord-339886-th1da1bb 2 28 system system NN cord-339886-th1da1bb 2 29 date date NN cord-339886-th1da1bb 2 30 : : : cord-339886-th1da1bb 2 31 2017 2017 CD cord-339886-th1da1bb 2 32 - - HYPH cord-339886-th1da1bb 2 33 11 11 CD cord-339886-th1da1bb 2 34 - - SYM cord-339886-th1da1bb 2 35 13 13 CD cord-339886-th1da1bb 2 36 journal journal NN cord-339886-th1da1bb 2 37 : : : cord-339886-th1da1bb 3 1 Nat Nat NNP cord-339886-th1da1bb 3 2 Rev Rev NNP cord-339886-th1da1bb 3 3 Genet Genet NNP cord-339886-th1da1bb 3 4 DOI DOI NNP cord-339886-th1da1bb 3 5 : : : cord-339886-th1da1bb 4 1 10.1038 10.1038 CD cord-339886-th1da1bb 4 2 / / SYM cord-339886-th1da1bb 4 3 nrg.2017.88 nrg.2017.88 CD cord-339886-th1da1bb 4 4 sha sha NN cord-339886-th1da1bb 4 5 : : : cord-339886-th1da1bb 4 6 297af3a9e45c96abf0191b085d895dc60a30019e 297af3a9e45c96abf0191b085d895dc60a30019e CD cord-339886-th1da1bb 4 7 doc_id doc_id CD cord-339886-th1da1bb 4 8 : : : cord-339886-th1da1bb 5 1 339886 339886 CD cord-339886-th1da1bb 5 2 cord_uid cord_uid NNS cord-339886-th1da1bb 5 3 : : : cord-339886-th1da1bb 6 1 th1da1bb th1da1bb . cord-339886-th1da1bb 7 1 The the DT cord-339886-th1da1bb 7 2 recent recent JJ cord-339886-th1da1bb 7 3 Ebola Ebola NNP cord-339886-th1da1bb 7 4 and and CC cord-339886-th1da1bb 7 5 Zika Zika NNP cord-339886-th1da1bb 7 6 epidemics epidemic NNS cord-339886-th1da1bb 7 7 demonstrate demonstrate VBP cord-339886-th1da1bb 7 8 the the DT cord-339886-th1da1bb 7 9 need need NN cord-339886-th1da1bb 7 10 for for IN cord-339886-th1da1bb 7 11 the the DT cord-339886-th1da1bb 7 12 continuous continuous JJ cord-339886-th1da1bb 7 13 surveillance surveillance NN cord-339886-th1da1bb 7 14 , , , cord-339886-th1da1bb 7 15 rapid rapid JJ cord-339886-th1da1bb 7 16 diagnosis diagnosis NN cord-339886-th1da1bb 7 17 and and CC cord-339886-th1da1bb 7 18 real real JJ cord-339886-th1da1bb 7 19 - - HYPH cord-339886-th1da1bb 7 20 time time NN cord-339886-th1da1bb 7 21 tracking tracking NN cord-339886-th1da1bb 7 22 of of IN cord-339886-th1da1bb 7 23 emerging emerge VBG cord-339886-th1da1bb 7 24 infectious infectious JJ cord-339886-th1da1bb 7 25 diseases disease NNS cord-339886-th1da1bb 7 26 . . . cord-339886-th1da1bb 8 1 Fast fast JJ cord-339886-th1da1bb 8 2 , , , cord-339886-th1da1bb 8 3 affordable affordable JJ cord-339886-th1da1bb 8 4 sequencing sequencing NN cord-339886-th1da1bb 8 5 of of IN cord-339886-th1da1bb 8 6 pathogen pathogen NN cord-339886-th1da1bb 8 7 genomes genome NNS cord-339886-th1da1bb 8 8 — — : cord-339886-th1da1bb 8 9 now now RB cord-339886-th1da1bb 8 10 a a DT cord-339886-th1da1bb 8 11 staple staple NN cord-339886-th1da1bb 8 12 of of IN cord-339886-th1da1bb 8 13 the the DT cord-339886-th1da1bb 8 14 public public JJ cord-339886-th1da1bb 8 15 health health NN cord-339886-th1da1bb 8 16 microbiology microbiology NN cord-339886-th1da1bb 8 17 laboratory laboratory NN cord-339886-th1da1bb 8 18 in in IN cord-339886-th1da1bb 8 19 well well RB cord-339886-th1da1bb 8 20 - - HYPH cord-339886-th1da1bb 8 21 resourced resource VBN cord-339886-th1da1bb 8 22 settings setting NNS cord-339886-th1da1bb 8 23 — — : cord-339886-th1da1bb 8 24 can can MD cord-339886-th1da1bb 8 25 affect affect VB cord-339886-th1da1bb 8 26 each each DT cord-339886-th1da1bb 8 27 of of IN cord-339886-th1da1bb 8 28 these these DT cord-339886-th1da1bb 8 29 areas area NNS cord-339886-th1da1bb 8 30 . . . cord-339886-th1da1bb 9 1 Coupling couple VBG cord-339886-th1da1bb 9 2 genomic genomic JJ cord-339886-th1da1bb 9 3 diagnostics diagnostic NNS cord-339886-th1da1bb 9 4 and and CC cord-339886-th1da1bb 9 5 epidemiology epidemiology NN cord-339886-th1da1bb 9 6 to to IN cord-339886-th1da1bb 9 7 innovative innovative JJ cord-339886-th1da1bb 9 8 digital digital JJ cord-339886-th1da1bb 9 9 disease disease NN cord-339886-th1da1bb 9 10 detection detection NN cord-339886-th1da1bb 9 11 platforms platform NNS cord-339886-th1da1bb 9 12 raises raise VBZ cord-339886-th1da1bb 9 13 the the DT cord-339886-th1da1bb 9 14 possibility possibility NN cord-339886-th1da1bb 9 15 of of IN cord-339886-th1da1bb 9 16 an an DT cord-339886-th1da1bb 9 17 open open JJ cord-339886-th1da1bb 9 18 , , , cord-339886-th1da1bb 9 19 global global JJ cord-339886-th1da1bb 9 20 , , , cord-339886-th1da1bb 9 21 digital digital JJ cord-339886-th1da1bb 9 22 pathogen pathogen NN cord-339886-th1da1bb 9 23 surveillance surveillance NN cord-339886-th1da1bb 9 24 system system NN cord-339886-th1da1bb 9 25 . . . cord-339886-th1da1bb 10 1 When when WRB cord-339886-th1da1bb 10 2 informed inform VBN cord-339886-th1da1bb 10 3 by by IN cord-339886-th1da1bb 10 4 a a DT cord-339886-th1da1bb 10 5 One one CD cord-339886-th1da1bb 10 6 Health Health NNP cord-339886-th1da1bb 10 7 approach approach NN cord-339886-th1da1bb 10 8 , , , cord-339886-th1da1bb 10 9 in in IN cord-339886-th1da1bb 10 10 which which WDT cord-339886-th1da1bb 10 11 human human NN cord-339886-th1da1bb 10 12 , , , cord-339886-th1da1bb 10 13 animal animal NN cord-339886-th1da1bb 10 14 and and CC cord-339886-th1da1bb 10 15 environmental environmental JJ cord-339886-th1da1bb 10 16 health health NN cord-339886-th1da1bb 10 17 are be VBP cord-339886-th1da1bb 10 18 considered consider VBN cord-339886-th1da1bb 10 19 together together RB cord-339886-th1da1bb 10 20 , , , cord-339886-th1da1bb 10 21 such such PDT cord-339886-th1da1bb 10 22 a a DT cord-339886-th1da1bb 10 23 genomics genomics NN cord-339886-th1da1bb 10 24 - - HYPH cord-339886-th1da1bb 10 25 based base VBN cord-339886-th1da1bb 10 26 system system NN cord-339886-th1da1bb 10 27 has have VBZ cord-339886-th1da1bb 10 28 profound profound JJ cord-339886-th1da1bb 10 29 potential potential NN cord-339886-th1da1bb 10 30 to to TO cord-339886-th1da1bb 10 31 improve improve VB cord-339886-th1da1bb 10 32 public public JJ cord-339886-th1da1bb 10 33 health health NN cord-339886-th1da1bb 10 34 in in IN cord-339886-th1da1bb 10 35 settings setting NNS cord-339886-th1da1bb 10 36 lacking lack VBG cord-339886-th1da1bb 10 37 robust robust JJ cord-339886-th1da1bb 10 38 laboratory laboratory NN cord-339886-th1da1bb 10 39 capacity capacity NN cord-339886-th1da1bb 10 40 . . . cord-339886-th1da1bb 11 1 SUPPLEMENTARY supplementary JJ cord-339886-th1da1bb 11 2 INFORMATION information NN cord-339886-th1da1bb 11 3 : : : cord-339886-th1da1bb 12 1 The the DT cord-339886-th1da1bb 12 2 online online JJ cord-339886-th1da1bb 12 3 version version NN cord-339886-th1da1bb 12 4 of of IN cord-339886-th1da1bb 12 5 this this DT cord-339886-th1da1bb 12 6 article article NN cord-339886-th1da1bb 12 7 ( ( -LRB- cord-339886-th1da1bb 12 8 doi:10.1038 doi:10.1038 NNP cord-339886-th1da1bb 12 9 / / SYM cord-339886-th1da1bb 12 10 nrg.2017.88 nrg.2017.88 CD cord-339886-th1da1bb 12 11 ) ) -RRB- cord-339886-th1da1bb 12 12 contains contain VBZ cord-339886-th1da1bb 12 13 supplementary supplementary JJ cord-339886-th1da1bb 12 14 material material NN cord-339886-th1da1bb 12 15 , , , cord-339886-th1da1bb 12 16 which which WDT cord-339886-th1da1bb 12 17 is be VBZ cord-339886-th1da1bb 12 18 available available JJ cord-339886-th1da1bb 12 19 to to IN cord-339886-th1da1bb 12 20 authorized authorize VBN cord-339886-th1da1bb 12 21 users user NNS cord-339886-th1da1bb 12 22 . . . cord-339886-th1da1bb 13 1 In in IN cord-339886-th1da1bb 13 2 late late JJ cord-339886-th1da1bb 13 3 2013 2013 CD cord-339886-th1da1bb 13 4 and and CC cord-339886-th1da1bb 13 5 early early JJ cord-339886-th1da1bb 13 6 2014 2014 CD cord-339886-th1da1bb 13 7 , , , cord-339886-th1da1bb 13 8 a a DT cord-339886-th1da1bb 13 9 lethal lethal JJ cord-339886-th1da1bb 13 10 haemorrhagic haemorrhagic JJ cord-339886-th1da1bb 13 11 fever fever NN cord-339886-th1da1bb 13 12 spread spread VBN cord-339886-th1da1bb 13 13 throughout throughout IN cord-339886-th1da1bb 13 14 forested forested JJ cord-339886-th1da1bb 13 15 Guinea Guinea NNP cord-339886-th1da1bb 13 16 ( ( -LRB- cord-339886-th1da1bb 13 17 Guinée Guinée NNP cord-339886-th1da1bb 13 18 forestière forestière NNP cord-339886-th1da1bb 13 19 ) ) -RRB- cord-339886-th1da1bb 13 20 , , , cord-339886-th1da1bb 13 21 undiagnosed undiagnose VBN cord-339886-th1da1bb 13 22 for for IN cord-339886-th1da1bb 13 23 months month NNS cord-339886-th1da1bb 13 24 . . . cord-339886-th1da1bb 14 1 By by IN cord-339886-th1da1bb 14 2 the the DT cord-339886-th1da1bb 14 3 time time NN cord-339886-th1da1bb 14 4 it -PRON- PRP cord-339886-th1da1bb 14 5 was be VBD cord-339886-th1da1bb 14 6 reported report VBN cord-339886-th1da1bb 14 7 to to TO cord-339886-th1da1bb 14 8 be be VB cord-339886-th1da1bb 14 9 Ebola Ebola NNP cord-339886-th1da1bb 14 10 , , , cord-339886-th1da1bb 14 11 the the DT cord-339886-th1da1bb 14 12 virus virus NN cord-339886-th1da1bb 14 13 had have VBD cord-339886-th1da1bb 14 14 spread spread VBN cord-339886-th1da1bb 14 15 to to IN cord-339886-th1da1bb 14 16 three three CD cord-339886-th1da1bb 14 17 countries country NNS cord-339886-th1da1bb 14 18 1 1 CD cord-339886-th1da1bb 14 19 and and CC cord-339886-th1da1bb 14 20 was be VBD cord-339886-th1da1bb 14 21 likely likely JJ cord-339886-th1da1bb 14 22 past past IN cord-339886-th1da1bb 14 23 the the DT cord-339886-th1da1bb 14 24 point point NN cord-339886-th1da1bb 14 25 at at IN cord-339886-th1da1bb 14 26 which which WDT cord-339886-th1da1bb 14 27 case case NN cord-339886-th1da1bb 14 28 - - HYPH cord-339886-th1da1bb 14 29 level level NN cord-339886-th1da1bb 14 30 control control NN cord-339886-th1da1bb 14 31 measures measure NNS cord-339886-th1da1bb 14 32 , , , cord-339886-th1da1bb 14 33 such such JJ cord-339886-th1da1bb 14 34 as as IN cord-339886-th1da1bb 14 35 isolation isolation NN cord-339886-th1da1bb 14 36 and and CC cord-339886-th1da1bb 14 37 infection infection NN cord-339886-th1da1bb 14 38 control control NN cord-339886-th1da1bb 14 39 , , , cord-339886-th1da1bb 14 40 could could MD cord-339886-th1da1bb 14 41 have have VB cord-339886-th1da1bb 14 42 contained contain VBN cord-339886-th1da1bb 14 43 the the DT cord-339886-th1da1bb 14 44 nascent nascent JJ cord-339886-th1da1bb 14 45 outbreak outbreak NN cord-339886-th1da1bb 14 46 . . . cord-339886-th1da1bb 15 1 In in IN cord-339886-th1da1bb 15 2 2015 2015 CD cord-339886-th1da1bb 15 3 , , , cord-339886-th1da1bb 15 4 a a DT cord-339886-th1da1bb 15 5 new new JJ cord-339886-th1da1bb 15 6 dengue dengue NN cord-339886-th1da1bb 15 7 - - HYPH cord-339886-th1da1bb 15 8 like like JJ cord-339886-th1da1bb 15 9 illness illness NN cord-339886-th1da1bb 15 10 was be VBD cord-339886-th1da1bb 15 11 implicated implicate VBN cord-339886-th1da1bb 15 12 in in IN cord-339886-th1da1bb 15 13 a a DT cord-339886-th1da1bb 15 14 dramatic dramatic JJ cord-339886-th1da1bb 15 15 increase increase NN cord-339886-th1da1bb 15 16 in in IN cord-339886-th1da1bb 15 17 Brazil Brazil NNP cord-339886-th1da1bb 15 18 's 's POS cord-339886-th1da1bb 15 19 microcephaly microcephaly NN cord-339886-th1da1bb 15 20 cases case NNS cord-339886-th1da1bb 15 21 ; ; : cord-339886-th1da1bb 15 22 one one CD cord-339886-th1da1bb 15 23 year year NN cord-339886-th1da1bb 15 24 later later RB cord-339886-th1da1bb 15 25 , , , cord-339886-th1da1bb 15 26 analyses analysis NNS cord-339886-th1da1bb 15 27 revealed reveal VBD cord-339886-th1da1bb 15 28 that that IN cord-339886-th1da1bb 15 29 the the DT cord-339886-th1da1bb 15 30 Zika Zika NNP cord-339886-th1da1bb 15 31 virus virus NN cord-339886-th1da1bb 15 32 had have VBD cord-339886-th1da1bb 15 33 been be VBN cord-339886-th1da1bb 15 34 sweeping sweep VBG cord-339886-th1da1bb 15 35 through through IN cord-339886-th1da1bb 15 36 the the DT cord-339886-th1da1bb 15 37 Americas Americas NNPS cord-339886-th1da1bb 15 38 , , , cord-339886-th1da1bb 15 39 unnoticed unnotice VBN cord-339886-th1da1bb 15 40 by by IN cord-339886-th1da1bb 15 41 existing exist VBG cord-339886-th1da1bb 15 42 surveillance surveillance NN cord-339886-th1da1bb 15 43 systems system NNS cord-339886-th1da1bb 15 44 , , , cord-339886-th1da1bb 15 45 since since IN cord-339886-th1da1bb 15 46 late late JJ cord-339886-th1da1bb 15 47 2013 2013 CD cord-339886-th1da1bb 15 48 . . . cord-339886-th1da1bb 16 1 Although although IN cord-339886-th1da1bb 16 2 public public JJ cord-339886-th1da1bb 16 3 health health NN cord-339886-th1da1bb 16 4 surveillance surveillance NN cord-339886-th1da1bb 16 5 systems system NNS cord-339886-th1da1bb 16 6 have have VBP cord-339886-th1da1bb 16 7 evolved evolve VBN cord-339886-th1da1bb 16 8 to to TO cord-339886-th1da1bb 16 9 meet meet VB cord-339886-th1da1bb 16 10 the the DT cord-339886-th1da1bb 16 11 changing change VBG cord-339886-th1da1bb 16 12 needs need NNS cord-339886-th1da1bb 16 13 of of IN cord-339886-th1da1bb 16 14 our -PRON- PRP$ cord-339886-th1da1bb 16 15 global global JJ cord-339886-th1da1bb 16 16 popu popu NN cord-339886-th1da1bb 16 17 lation lation NN cord-339886-th1da1bb 16 18 , , , cord-339886-th1da1bb 16 19 we -PRON- PRP cord-339886-th1da1bb 16 20 continue continue VBP cord-339886-th1da1bb 16 21 to to TO cord-339886-th1da1bb 16 22 dramatically dramatically RB cord-339886-th1da1bb 16 23 underestimate underestimate VB cord-339886-th1da1bb 16 24 our -PRON- PRP$ cord-339886-th1da1bb 16 25 vulnerability vulnerability NN cord-339886-th1da1bb 16 26 to to IN cord-339886-th1da1bb 16 27 pathogens pathogen NNS cord-339886-th1da1bb 16 28 , , , cord-339886-th1da1bb 16 29 both both CC cord-339886-th1da1bb 16 30 old old JJ cord-339886-th1da1bb 16 31 and and CC cord-339886-th1da1bb 16 32 new new JJ cord-339886-th1da1bb 16 33 5 5 CD cord-339886-th1da1bb 16 34 . . . cord-339886-th1da1bb 17 1 Indeed indeed RB cord-339886-th1da1bb 17 2 , , , cord-339886-th1da1bb 17 3 the the DT cord-339886-th1da1bb 17 4 recent recent JJ cord-339886-th1da1bb 17 5 events event NNS cord-339886-th1da1bb 17 6 in in IN cord-339886-th1da1bb 17 7 West West NNP cord-339886-th1da1bb 17 8 Africa Africa NNP cord-339886-th1da1bb 17 9 and and CC cord-339886-th1da1bb 17 10 Brazil Brazil NNP cord-339886-th1da1bb 17 11 highlight highlight VBP cord-339886-th1da1bb 17 12 the the DT cord-339886-th1da1bb 17 13 gaps gap NNS cord-339886-th1da1bb 17 14 in in IN cord-339886-th1da1bb 17 15 existing exist VBG cord-339886-th1da1bb 17 16 infectious infectious JJ cord-339886-th1da1bb 17 17 disease disease NN cord-339886-th1da1bb 17 18 surveillance surveillance NN cord-339886-th1da1bb 17 19 systems system NNS cord-339886-th1da1bb 17 20 , , , cord-339886-th1da1bb 17 21 particularly particularly RB cord-339886-th1da1bb 17 22 when when WRB cord-339886-th1da1bb 17 23 dealing deal VBG cord-339886-th1da1bb 17 24 with with IN cord-339886-th1da1bb 17 25 novel novel JJ cord-339886-th1da1bb 17 26 pathogens pathogen NNS cord-339886-th1da1bb 17 27 or or CC cord-339886-th1da1bb 17 28 pathogens pathogen NNS cord-339886-th1da1bb 17 29 whose whose WP$ cord-339886-th1da1bb 17 30 geographic geographic JJ cord-339886-th1da1bb 17 31 range range NN cord-339886-th1da1bb 17 32 has have VBZ cord-339886-th1da1bb 17 33 extended extend VBN cord-339886-th1da1bb 17 34 into into IN cord-339886-th1da1bb 17 35 a a DT cord-339886-th1da1bb 17 36 new new JJ cord-339886-th1da1bb 17 37 region region NN cord-339886-th1da1bb 17 38 . . . cord-339886-th1da1bb 18 1 Despite despite IN cord-339886-th1da1bb 18 2 the the DT cord-339886-th1da1bb 18 3 lessons lesson NNS cord-339886-th1da1bb 18 4 learned learn VBN cord-339886-th1da1bb 18 5 from from IN cord-339886-th1da1bb 18 6 previous previous JJ cord-339886-th1da1bb 18 7 outbreaks outbreak NNS cord-339886-th1da1bb 18 8 6 6 CD cord-339886-th1da1bb 18 9 , , , cord-339886-th1da1bb 18 10 such such JJ cord-339886-th1da1bb 18 11 as as IN cord-339886-th1da1bb 18 12 the the DT cord-339886-th1da1bb 18 13 severe severe JJ cord-339886-th1da1bb 18 14 acute acute JJ cord-339886-th1da1bb 18 15 respiratory respiratory JJ cord-339886-th1da1bb 18 16 syndrome syndrome NN cord-339886-th1da1bb 18 17 ( ( -LRB- cord-339886-th1da1bb 18 18 SARS SARS NNP cord-339886-th1da1bb 18 19 ) ) -RRB- cord-339886-th1da1bb 18 20 epidemic epidemic NN cord-339886-th1da1bb 18 21 in in IN cord-339886-th1da1bb 18 22 2002 2002 CD cord-339886-th1da1bb 18 23 - - SYM cord-339886-th1da1bb 18 24 2003 2003 CD cord-339886-th1da1bb 18 25 and and CC cord-339886-th1da1bb 18 26 the the DT cord-339886-th1da1bb 18 27 2009 2009 CD cord-339886-th1da1bb 18 28 influenza influenza NN cord-339886-th1da1bb 18 29 pandemic pandemic NN cord-339886-th1da1bb 19 1 -particularly -particularly . cord-339886-th1da1bb 20 1 the the DT cord-339886-th1da1bb 20 2 need need NN cord-339886-th1da1bb 20 3 for for IN cord-339886-th1da1bb 20 4 enhanced enhance VBN cord-339886-th1da1bb 20 5 national national JJ cord-339886-th1da1bb 20 6 surveillance surveillance NN cord-339886-th1da1bb 20 7 and and CC cord-339886-th1da1bb 20 8 diagnostic diagnostic JJ cord-339886-th1da1bb 20 9 capacity capacity NN cord-339886-th1da1bb 20 10 -infectious -infectious JJ cord-339886-th1da1bb 20 11 threats threat NNS cord-339886-th1da1bb 20 12 continue continue VBP cord-339886-th1da1bb 20 13 to to TO cord-339886-th1da1bb 20 14 surprise surprise VB cord-339886-th1da1bb 20 15 and and CC cord-339886-th1da1bb 20 16 sometimes sometimes RB cord-339886-th1da1bb 20 17 overwhelm overwhelm VB cord-339886-th1da1bb 20 18 the the DT cord-339886-th1da1bb 20 19 global global JJ cord-339886-th1da1bb 20 20 health health NN cord-339886-th1da1bb 20 21 response response NN cord-339886-th1da1bb 20 22 . . . cord-339886-th1da1bb 21 1 The the DT cord-339886-th1da1bb 21 2 cost cost NN cord-339886-th1da1bb 21 3 of of IN cord-339886-th1da1bb 21 4 these these DT cord-339886-th1da1bb 21 5 epidemics epidemic NNS cord-339886-th1da1bb 21 6 demands demand VBZ cord-339886-th1da1bb 21 7 that that IN cord-339886-th1da1bb 21 8 we -PRON- PRP cord-339886-th1da1bb 21 9 take take VBP cord-339886-th1da1bb 21 10 action action NN cord-339886-th1da1bb 21 11 : : : cord-339886-th1da1bb 22 1 with with IN cord-339886-th1da1bb 22 2 fewer few JJR cord-339886-th1da1bb 22 3 than than IN cord-339886-th1da1bb 22 4 30,000 30,000 CD cord-339886-th1da1bb 22 5 cases case NNS cord-339886-th1da1bb 22 6 , , , cord-339886-th1da1bb 22 7 the the DT cord-339886-th1da1bb 22 8 Ebola Ebola NNP cord-339886-th1da1bb 22 9 outbreak outbreak NN cord-339886-th1da1bb 22 10 ultimately ultimately RB cord-339886-th1da1bb 22 11 resulted result VBD cord-339886-th1da1bb 22 12 in in IN cord-339886-th1da1bb 22 13 over over IN cord-339886-th1da1bb 22 14 11,000 11,000 CD cord-339886-th1da1bb 22 15 deaths death NNS cord-339886-th1da1bb 22 16 , , , cord-339886-th1da1bb 22 17 left leave VBD cord-339886-th1da1bb 22 18 nearly nearly RB cord-339886-th1da1bb 22 19 10,000 10,000 CD cord-339886-th1da1bb 22 20 children child NNS cord-339886-th1da1bb 22 21 without without IN cord-339886-th1da1bb 22 22 parents parent NNS cord-339886-th1da1bb 22 23 7 7 CD cord-339886-th1da1bb 22 24 and and CC cord-339886-th1da1bb 22 25 caused cause VBD cord-339886-th1da1bb 22 26 cumulative cumulative JJ cord-339886-th1da1bb 22 27 gross gross JJ cord-339886-th1da1bb 22 28 domestic domestic JJ cord-339886-th1da1bb 22 29 product product NN cord-339886-th1da1bb 22 30 losses loss NNS cord-339886-th1da1bb 22 31 of of IN cord-339886-th1da1bb 22 32 more more JJR cord-339886-th1da1bb 22 33 than than IN cord-339886-th1da1bb 22 34 10 10 CD cord-339886-th1da1bb 22 35 % % NN cord-339886-th1da1bb 22 36 8 8 CD cord-339886-th1da1bb 22 37 . . . cord-339886-th1da1bb 23 1 As as IN cord-339886-th1da1bb 23 2 with with IN cord-339886-th1da1bb 23 3 prior prior JJ cord-339886-th1da1bb 23 4 crises crisis NNS cord-339886-th1da1bb 23 5 , , , cord-339886-th1da1bb 23 6 in in IN cord-339886-th1da1bb 23 7 the the DT cord-339886-th1da1bb 23 8 wake wake NN cord-339886-th1da1bb 23 9 of of IN cord-339886-th1da1bb 23 10 Ebola Ebola NNP cord-339886-th1da1bb 23 11 , , , cord-339886-th1da1bb 23 12 multiple multiple JJ cord-339886-th1da1bb 23 13 commissions commission NNS cord-339886-th1da1bb 23 14 have have VBP cord-339886-th1da1bb 23 15 offered offer VBN cord-339886-th1da1bb 23 16 suggestions suggestion NNS cord-339886-th1da1bb 23 17 for for IN cord-339886-th1da1bb 23 18 essential essential JJ cord-339886-th1da1bb 23 19 reforms reform NNS cord-339886-th1da1bb 23 20 8 8 CD cord-339886-th1da1bb 23 21 , , , cord-339886-th1da1bb 23 22 9 9 CD cord-339886-th1da1bb 23 23 . . . cord-339886-th1da1bb 24 1 Most Most JJS cord-339886-th1da1bb 24 2 focus focus VBP cord-339886-th1da1bb 24 3 on on IN cord-339886-th1da1bb 24 4 systems system NNS cord-339886-th1da1bb 24 5 - - HYPH cord-339886-th1da1bb 24 6 level level NN cord-339886-th1da1bb 24 7 change change NN cord-339886-th1da1bb 24 8 , , , cord-339886-th1da1bb 24 9 such such JJ cord-339886-th1da1bb 24 10 as as IN cord-339886-th1da1bb 24 11 funding funding NN cord-339886-th1da1bb 24 12 research research NN cord-339886-th1da1bb 24 13 and and CC cord-339886-th1da1bb 24 14 development development NN cord-339886-th1da1bb 24 15 or or CC cord-339886-th1da1bb 24 16 creating create VBG cord-339886-th1da1bb 24 17 a a DT cord-339886-th1da1bb 24 18 centralized centralized JJ cord-339886-th1da1bb 24 19 pandemic pandemic NN cord-339886-th1da1bb 24 20 preparedness preparedness NN cord-339886-th1da1bb 24 21 and and CC cord-339886-th1da1bb 24 22 response response NN cord-339886-th1da1bb 24 23 agency agency NN cord-339886-th1da1bb 24 24 . . . cord-339886-th1da1bb 25 1 However however RB cord-339886-th1da1bb 25 2 , , , cord-339886-th1da1bb 25 3 they -PRON- PRP cord-339886-th1da1bb 25 4 also also RB cord-339886-th1da1bb 25 5 call call VBP cord-339886-th1da1bb 25 6 for for IN cord-339886-th1da1bb 25 7 enhanced enhanced JJ cord-339886-th1da1bb 25 8 molecular molecular JJ cord-339886-th1da1bb 25 9 diagnostic diagnostic JJ cord-339886-th1da1bb 25 10 and and CC cord-339886-th1da1bb 25 11 surveillance surveillance NN cord-339886-th1da1bb 25 12 capacity capacity NN cord-339886-th1da1bb 25 13 coupled couple VBN cord-339886-th1da1bb 25 14 to to IN cord-339886-th1da1bb 25 15 data data NN cord-339886-th1da1bb 25 16 - - HYPH cord-339886-th1da1bb 25 17 sharing share VBG cord-339886-th1da1bb 25 18 frameworks framework NNS cord-339886-th1da1bb 25 19 . . . cord-339886-th1da1bb 26 1 This this DT cord-339886-th1da1bb 26 2 hints hint VBZ cord-339886-th1da1bb 26 3 at at IN cord-339886-th1da1bb 26 4 an an DT cord-339886-th1da1bb 26 5 emerging emerge VBG cord-339886-th1da1bb 26 6 paradigm paradigm NN cord-339886-th1da1bb 26 7 for for IN cord-339886-th1da1bb 26 8 rapid rapid JJ cord-339886-th1da1bb 26 9 outbreak outbreak NN cord-339886-th1da1bb 26 10 response response NN cord-339886-th1da1bb 26 11 , , , cord-339886-th1da1bb 26 12 one one CD cord-339886-th1da1bb 26 13 that that WDT cord-339886-th1da1bb 26 14 employs employ VBZ cord-339886-th1da1bb 26 15 new new JJ cord-339886-th1da1bb 26 16 tools tool NNS cord-339886-th1da1bb 26 17 for for IN cord-339886-th1da1bb 26 18 pathogen pathogen NN cord-339886-th1da1bb 26 19 genome genome NN cord-339886-th1da1bb 26 20 sequencing sequencing NN cord-339886-th1da1bb 26 21 and and CC cord-339886-th1da1bb 26 22 epidemiological epidemiological JJ cord-339886-th1da1bb 26 23 analysis analysis NN cord-339886-th1da1bb 26 24 ( ( -LRB- cord-339886-th1da1bb 26 25 FIG FIG NNP cord-339886-th1da1bb 26 26 . . . cord-339886-th1da1bb 26 27 1 1 CD cord-339886-th1da1bb 26 28 ) ) -RRB- cord-339886-th1da1bb 26 29 and and CC cord-339886-th1da1bb 26 30 that that DT cord-339886-th1da1bb 26 31 can can MD cord-339886-th1da1bb 26 32 be be VB cord-339886-th1da1bb 26 33 deployed deploy VBN cord-339886-th1da1bb 26 34 anywhere anywhere RB cord-339886-th1da1bb 26 35 . . . cord-339886-th1da1bb 27 1 In in IN cord-339886-th1da1bb 27 2 this this DT cord-339886-th1da1bb 27 3 model model NN cord-339886-th1da1bb 27 4 , , , cord-339886-th1da1bb 27 5 portable portable JJ cord-339886-th1da1bb 27 6 , , , cord-339886-th1da1bb 27 7 in in IN cord-339886-th1da1bb 27 8 - - HYPH cord-339886-th1da1bb 27 9 country country NN cord-339886-th1da1bb 27 10 genomic genomic JJ cord-339886-th1da1bb 27 11 diagnostics diagnostic NNS cord-339886-th1da1bb 27 12 are be VBP cord-339886-th1da1bb 27 13 targeted target VBN cord-339886-th1da1bb 27 14 to to IN cord-339886-th1da1bb 27 15 key key JJ cord-339886-th1da1bb 27 16 settings setting NNS cord-339886-th1da1bb 27 17 for for IN cord-339886-th1da1bb 27 18 routine routine JJ cord-339886-th1da1bb 27 19 human human JJ cord-339886-th1da1bb 27 20 , , , cord-339886-th1da1bb 27 21 animal animal NN cord-339886-th1da1bb 27 22 and and CC cord-339886-th1da1bb 27 23 environ environ NNP cord-339886-th1da1bb 27 24 mental mental JJ cord-339886-th1da1bb 27 25 surveillance surveillance NN cord-339886-th1da1bb 27 26 or or CC cord-339886-th1da1bb 27 27 rapidly rapidly RB cord-339886-th1da1bb 27 28 deployed deploy VBN cord-339886-th1da1bb 27 29 to to IN cord-339886-th1da1bb 27 30 a a DT cord-339886-th1da1bb 27 31 setting setting NN cord-339886-th1da1bb 27 32 with with IN cord-339886-th1da1bb 27 33 a a DT cord-339886-th1da1bb 27 34 nascent nascent JJ cord-339886-th1da1bb 27 35 outbreak outbreak NN cord-339886-th1da1bb 27 36 . . . cord-339886-th1da1bb 28 1 Within within IN cord-339886-th1da1bb 28 2 our -PRON- PRP$ cord-339886-th1da1bb 28 3 increasingly increasingly RB cord-339886-th1da1bb 28 4 digital digital JJ cord-339886-th1da1bb 28 5 landscape landscape NN cord-339886-th1da1bb 28 6 , , , cord-339886-th1da1bb 28 7 wherein wherein WRB cord-339886-th1da1bb 28 8 a a DT cord-339886-th1da1bb 28 9 clinical clinical JJ cord-339886-th1da1bb 28 10 sample sample NN cord-339886-th1da1bb 28 11 can can MD cord-339886-th1da1bb 28 12 be be VB cord-339886-th1da1bb 28 13 transformed transform VBN cord-339886-th1da1bb 28 14 into into IN cord-339886-th1da1bb 28 15 a a DT cord-339886-th1da1bb 28 16 stream stream NN cord-339886-th1da1bb 28 17 of of IN cord-339886-th1da1bb 28 18 data datum NNS cord-339886-th1da1bb 28 19 for for IN cord-339886-th1da1bb 28 20 rapid rapid JJ cord-339886-th1da1bb 28 21 analysis analysis NN cord-339886-th1da1bb 28 22 and and CC cord-339886-th1da1bb 28 23 dissemination dissemination NN cord-339886-th1da1bb 28 24 in in IN cord-339886-th1da1bb 28 25 a a DT cord-339886-th1da1bb 28 26 matter matter NN cord-339886-th1da1bb 28 27 of of IN cord-339886-th1da1bb 28 28 hours hour NNS cord-339886-th1da1bb 28 29 , , , cord-339886-th1da1bb 28 30 we -PRON- PRP cord-339886-th1da1bb 28 31 face face VBP cord-339886-th1da1bb 28 32 a a DT cord-339886-th1da1bb 28 33 tremendous tremendous JJ cord-339886-th1da1bb 28 34 opportunity opportunity NN cord-339886-th1da1bb 28 35 to to TO cord-339886-th1da1bb 28 36 more more RBR cord-339886-th1da1bb 28 37 proactively proactively RB cord-339886-th1da1bb 28 38 respond respond VB cord-339886-th1da1bb 28 39 to to IN cord-339886-th1da1bb 28 40 disease disease NN cord-339886-th1da1bb 28 41 events event NNS cord-339886-th1da1bb 28 42 . . . cord-339886-th1da1bb 29 1 However however RB cord-339886-th1da1bb 29 2 , , , cord-339886-th1da1bb 29 3 the the DT cord-339886-th1da1bb 29 4 potential potential JJ cord-339886-th1da1bb 29 5 benefits benefit NNS cord-339886-th1da1bb 29 6 of of IN cord-339886-th1da1bb 29 7 such such PDT cord-339886-th1da1bb 29 8 a a DT cord-339886-th1da1bb 29 9 system system NN cord-339886-th1da1bb 29 10 are be VBP cord-339886-th1da1bb 29 11 not not RB cord-339886-th1da1bb 29 12 guaranteed guarantee VBN cord-339886-th1da1bb 29 13 , , , cord-339886-th1da1bb 29 14 and and CC cord-339886-th1da1bb 29 15 many many JJ cord-339886-th1da1bb 29 16 obstacles obstacle NNS cord-339886-th1da1bb 29 17 remain remain VBP cord-339886-th1da1bb 29 18 . . . cord-339886-th1da1bb 30 1 Here here RB cord-339886-th1da1bb 30 2 , , , cord-339886-th1da1bb 30 3 we -PRON- PRP cord-339886-th1da1bb 30 4 review review VBP cord-339886-th1da1bb 30 5 recent recent JJ cord-339886-th1da1bb 30 6 advances advance NNS cord-339886-th1da1bb 30 7 in in IN cord-339886-th1da1bb 30 8 genomicsinformed genomicsinformed NNP cord-339886-th1da1bb 30 9 outbreak outbreak NN cord-339886-th1da1bb 30 10 response response NN cord-339886-th1da1bb 30 11 , , , cord-339886-th1da1bb 30 12 including include VBG cord-339886-th1da1bb 30 13 the the DT cord-339886-th1da1bb 30 14 role role NN cord-339886-th1da1bb 30 15 of of IN cord-339886-th1da1bb 30 16 real real JJ cord-339886-th1da1bb 30 17 - - HYPH cord-339886-th1da1bb 30 18 time time NN cord-339886-th1da1bb 30 19 sequencing sequencing NN cord-339886-th1da1bb 30 20 in in IN cord-339886-th1da1bb 30 21 both both DT cord-339886-th1da1bb 30 22 diagnostics diagnostic NNS cord-339886-th1da1bb 30 23 and and CC cord-339886-th1da1bb 30 24 epidemiology epidemiology NN cord-339886-th1da1bb 30 25 . . . cord-339886-th1da1bb 31 1 We -PRON- PRP cord-339886-th1da1bb 31 2 outline outline VBP cord-339886-th1da1bb 31 3 the the DT cord-339886-th1da1bb 31 4 opportunities opportunity NNS cord-339886-th1da1bb 31 5 for for IN cord-339886-th1da1bb 31 6 integrating integrate VBG cord-339886-th1da1bb 31 7 sequencing sequencing NN cord-339886-th1da1bb 31 8 with with IN cord-339886-th1da1bb 31 9 the the DT cord-339886-th1da1bb 31 10 One One NNP cord-339886-th1da1bb 31 11 Health Health NNP cord-339886-th1da1bb 31 12 and and CC cord-339886-th1da1bb 31 13 digital digital JJ cord-339886-th1da1bb 31 14 epidemiology epidemiology NN cord-339886-th1da1bb 31 15 fields field NNS cord-339886-th1da1bb 31 16 , , , cord-339886-th1da1bb 31 17 and and CC cord-339886-th1da1bb 31 18 we -PRON- PRP cord-339886-th1da1bb 31 19 examine examine VBP cord-339886-th1da1bb 31 20 the the DT cord-339886-th1da1bb 31 21 ethical ethical JJ cord-339886-th1da1bb 31 22 , , , cord-339886-th1da1bb 31 23 legal legal JJ cord-339886-th1da1bb 31 24 The the DT cord-339886-th1da1bb 31 25 systematic systematic JJ cord-339886-th1da1bb 31 26 collection collection NN cord-339886-th1da1bb 31 27 , , , cord-339886-th1da1bb 31 28 analysis analysis NN cord-339886-th1da1bb 31 29 and and CC cord-339886-th1da1bb 31 30 dissemination dissemination NN cord-339886-th1da1bb 31 31 of of IN cord-339886-th1da1bb 31 32 health health NN cord-339886-th1da1bb 31 33 - - HYPH cord-339886-th1da1bb 31 34 related relate VBN cord-339886-th1da1bb 31 35 data datum NNS cord-339886-th1da1bb 31 36 to to TO cord-339886-th1da1bb 31 37 support support VB cord-339886-th1da1bb 31 38 planning planning NN cord-339886-th1da1bb 31 39 , , , cord-339886-th1da1bb 31 40 implementation implementation NN cord-339886-th1da1bb 31 41 and and CC cord-339886-th1da1bb 31 42 evaluation evaluation NN cord-339886-th1da1bb 31 43 of of IN cord-339886-th1da1bb 31 44 public public JJ cord-339886-th1da1bb 31 45 health health NN cord-339886-th1da1bb 31 46 practices practice NNS cord-339886-th1da1bb 31 47 and and CC cord-339886-th1da1bb 31 48 response response NN cord-339886-th1da1bb 31 49 . . . cord-339886-th1da1bb 32 1 Outbreaks outbreak NNS cord-339886-th1da1bb 32 2 and and CC cord-339886-th1da1bb 32 3 epidemics epidemic NNS cord-339886-th1da1bb 32 4 are be VBP cord-339886-th1da1bb 32 5 both both DT cord-339886-th1da1bb 32 6 defined define VBN cord-339886-th1da1bb 32 7 as as IN cord-339886-th1da1bb 32 8 increases increase NNS cord-339886-th1da1bb 32 9 in in IN cord-339886-th1da1bb 32 10 the the DT cord-339886-th1da1bb 32 11 number number NN cord-339886-th1da1bb 32 12 of of IN cord-339886-th1da1bb 32 13 cases case NNS cord-339886-th1da1bb 32 14 of of IN cord-339886-th1da1bb 32 15 a a DT cord-339886-th1da1bb 32 16 particular particular JJ cord-339886-th1da1bb 32 17 disease disease NN cord-339886-th1da1bb 32 18 beyond beyond IN cord-339886-th1da1bb 32 19 what what WP cord-339886-th1da1bb 32 20 is be VBZ cord-339886-th1da1bb 32 21 expected expect VBN cord-339886-th1da1bb 32 22 in in IN cord-339886-th1da1bb 32 23 a a DT cord-339886-th1da1bb 32 24 given give VBN cord-339886-th1da1bb 32 25 setting setting NN cord-339886-th1da1bb 32 26 . . . cord-339886-th1da1bb 33 1 In in IN cord-339886-th1da1bb 33 2 outbreaks outbreak NNS cord-339886-th1da1bb 33 3 , , , cord-339886-th1da1bb 33 4 the the DT cord-339886-th1da1bb 33 5 affected affect VBN cord-339886-th1da1bb 33 6 settings setting NNS cord-339886-th1da1bb 33 7 are be VBP cord-339886-th1da1bb 33 8 smaller small JJR cord-339886-th1da1bb 33 9 geographic geographic JJ cord-339886-th1da1bb 33 10 regions region NNS cord-339886-th1da1bb 33 11 ; ; : cord-339886-th1da1bb 33 12 epidemics epidemic NNS cord-339886-th1da1bb 33 13 can can MD cord-339886-th1da1bb 33 14 span span VB cord-339886-th1da1bb 33 15 larger large JJR cord-339886-th1da1bb 33 16 areas area NNS cord-339886-th1da1bb 33 17 . . . cord-339886-th1da1bb 34 1 Clinical clinical JJ cord-339886-th1da1bb 34 2 metagenomics metagenomic NNS cord-339886-th1da1bb 34 3 . . . cord-339886-th1da1bb 35 1 With with IN cord-339886-th1da1bb 35 2 its -PRON- PRP$ cord-339886-th1da1bb 35 3 untargeted untargeted JJ cord-339886-th1da1bb 35 4 approach approach NN cord-339886-th1da1bb 35 5 to to IN cord-339886-th1da1bb 35 6 sequencing sequencing NN cord-339886-th1da1bb 35 7 , , , cord-339886-th1da1bb 35 8 clinical clinical JJ cord-339886-th1da1bb 35 9 metagenomics metagenomic NNS cord-339886-th1da1bb 35 10 can can MD cord-339886-th1da1bb 35 11 cross cross VB cord-339886-th1da1bb 35 12 disciplines discipline NNS cord-339886-th1da1bb 35 13 in in IN cord-339886-th1da1bb 35 14 a a DT cord-339886-th1da1bb 35 15 way way NN cord-339886-th1da1bb 35 16 that that IN cord-339886-th1da1bb 35 17 clinical clinical JJ cord-339886-th1da1bb 35 18 microbiology microbiology NN cord-339886-th1da1bb 35 19 struggles struggle VBZ cord-339886-th1da1bb 35 20 to to IN cord-339886-th1da1bb 35 21 -identifying -identifye VBG cord-339886-th1da1bb 35 22 viral viral JJ cord-339886-th1da1bb 35 23 , , , cord-339886-th1da1bb 35 24 bacterial bacterial JJ cord-339886-th1da1bb 35 25 , , , cord-339886-th1da1bb 35 26 fungal fungal JJ cord-339886-th1da1bb 35 27 and and CC cord-339886-th1da1bb 35 28 other other JJ cord-339886-th1da1bb 35 29 eukaryotic eukaryotic JJ cord-339886-th1da1bb 35 30 pathogens pathogen NNS cord-339886-th1da1bb 35 31 in in IN cord-339886-th1da1bb 35 32 a a DT cord-339886-th1da1bb 35 33 single single JJ cord-339886-th1da1bb 35 34 assay assay NN cord-339886-th1da1bb 35 35 11 11 CD cord-339886-th1da1bb 35 36 and and CC cord-339886-th1da1bb 35 37 coupling couple VBG cord-339886-th1da1bb 35 38 pathogen pathogen NN cord-339886-th1da1bb 35 39 detection detection NN cord-339886-th1da1bb 35 40 to to IN cord-339886-th1da1bb 35 41 pathogen pathogen NN cord-339886-th1da1bb 35 42 discovery discovery NN cord-339886-th1da1bb 35 43 . . . cord-339886-th1da1bb 36 1 Given give VBN cord-339886-th1da1bb 36 2 the the DT cord-339886-th1da1bb 36 3 current current JJ cord-339886-th1da1bb 36 4 high high JJ cord-339886-th1da1bb 36 5 cost cost NN cord-339886-th1da1bb 36 6 of of IN cord-339886-th1da1bb 36 7 the the DT cord-339886-th1da1bb 36 8 technique technique NN cord-339886-th1da1bb 36 9 -conservatively -conservatively RB cord-339886-th1da1bb 36 10 estimated estimate VBN cord-339886-th1da1bb 36 11 at at IN cord-339886-th1da1bb 36 12 several several JJ cord-339886-th1da1bb 36 13 thousand thousand CD cord-339886-th1da1bb 36 14 dollars dollar NNS cord-339886-th1da1bb 36 15 -it -it : cord-339886-th1da1bb 36 16 is be VBZ cord-339886-th1da1bb 36 17 most most RBS cord-339886-th1da1bb 36 18 often often RB cord-339886-th1da1bb 36 19 used use VBN cord-339886-th1da1bb 36 20 when when WRB cord-339886-th1da1bb 36 21 dealing deal VBG cord-339886-th1da1bb 36 22 with with IN cord-339886-th1da1bb 36 23 potentially potentially RB cord-339886-th1da1bb 36 24 lethal lethal JJ cord-339886-th1da1bb 36 25 infections infection NNS cord-339886-th1da1bb 36 26 that that WDT cord-339886-th1da1bb 36 27 fail fail VBP cord-339886-th1da1bb 36 28 the the DT cord-339886-th1da1bb 36 29 conventional conventional JJ cord-339886-th1da1bb 36 30 diagnostic diagnostic JJ cord-339886-th1da1bb 36 31 paradigm paradigm NN cord-339886-th1da1bb 36 32 , , , cord-339886-th1da1bb 36 33 such such JJ cord-339886-th1da1bb 36 34 as as IN cord-339886-th1da1bb 36 35 the the DT cord-339886-th1da1bb 36 36 recent recent JJ cord-339886-th1da1bb 36 37 diagnosis diagnosis NN cord-339886-th1da1bb 36 38 of of IN cord-339886-th1da1bb 36 39 an an DT cord-339886-th1da1bb 36 40 unusual unusual JJ cord-339886-th1da1bb 36 41 case case NN cord-339886-th1da1bb 36 42 of of IN cord-339886-th1da1bb 36 43 meningoencephalitis meningoencephalitis NN cord-339886-th1da1bb 36 44 caused cause VBN cord-339886-th1da1bb 36 45 by by IN cord-339886-th1da1bb 36 46 the the DT cord-339886-th1da1bb 36 47 amoeboid amoeboid JJ cord-339886-th1da1bb 36 48 parasite parasite NN cord-339886-th1da1bb 36 49 Balamuthia Balamuthia NNP cord-339886-th1da1bb 36 50 man man NN cord-339886-th1da1bb 36 51 drillaris drillari VBD cord-339886-th1da1bb 36 52 12 12 CD cord-339886-th1da1bb 36 53 or or CC cord-339886-th1da1bb 36 54 the the DT cord-339886-th1da1bb 36 55 diagnosis diagnosis NN cord-339886-th1da1bb 36 56 and and CC cord-339886-th1da1bb 36 57 treatment treatment NN cord-339886-th1da1bb 36 58 of of IN cord-339886-th1da1bb 36 59 neuroleptospirosis neuroleptospirosis NN cord-339886-th1da1bb 36 60 in in IN cord-339886-th1da1bb 36 61 a a DT cord-339886-th1da1bb 36 62 critically critically RB cord-339886-th1da1bb 36 63 unwell unwell JJ cord-339886-th1da1bb 36 64 teenager teenager NN cord-339886-th1da1bb 36 65 13 13 CD cord-339886-th1da1bb 36 66 . . . cord-339886-th1da1bb 37 1 In in IN cord-339886-th1da1bb 37 2 the the DT cord-339886-th1da1bb 37 3 latter latter JJ cord-339886-th1da1bb 37 4 case case NN cord-339886-th1da1bb 37 5 , , , cord-339886-th1da1bb 37 6 despite despite IN cord-339886-th1da1bb 37 7 a a DT cord-339886-th1da1bb 37 8 high high JJ cord-339886-th1da1bb 37 9 index index NN cord-339886-th1da1bb 37 10 of of IN cord-339886-th1da1bb 37 11 suspicion suspicion NN cord-339886-th1da1bb 37 12 for for IN cord-339886-th1da1bb 37 13 infection infection NN cord-339886-th1da1bb 37 14 , , , cord-339886-th1da1bb 37 15 Leptospira Leptospira NNP cord-339886-th1da1bb 37 16 santa santa NNP cord-339886-th1da1bb 37 17 rosai rosai NNP cord-339886-th1da1bb 37 18 was be VBD cord-339886-th1da1bb 37 19 not not RB cord-339886-th1da1bb 37 20 detected detect VBN cord-339886-th1da1bb 37 21 by by IN cord-339886-th1da1bb 37 22 culture culture NN cord-339886-th1da1bb 37 23 or or CC cord-339886-th1da1bb 37 24 PCR PCR NNP cord-339886-th1da1bb 37 25 , , , cord-339886-th1da1bb 37 26 as as IN cord-339886-th1da1bb 37 27 the the DT cord-339886-th1da1bb 37 28 diagnostic diagnostic JJ cord-339886-th1da1bb 37 29 primer primer NN cord-339886-th1da1bb 37 30 sequences sequence NNS cord-339886-th1da1bb 37 31 were be VBD cord-339886-th1da1bb 37 32 eventually eventually RB cord-339886-th1da1bb 37 33 found find VBN cord-339886-th1da1bb 37 34 to to TO cord-339886-th1da1bb 37 35 be be VB cord-339886-th1da1bb 37 36 a a DT cord-339886-th1da1bb 37 37 poor poor JJ cord-339886-th1da1bb 37 38 match match NN cord-339886-th1da1bb 37 39 to to IN cord-339886-th1da1bb 37 40 the the DT cord-339886-th1da1bb 37 41 genome genome NN cord-339886-th1da1bb 37 42 of of IN cord-339886-th1da1bb 37 43 the the DT cord-339886-th1da1bb 37 44 pathogen pathogen NN cord-339886-th1da1bb 37 45 . . . cord-339886-th1da1bb 38 1 Intravenous intravenous JJ cord-339886-th1da1bb 38 2 antibiotic antibiotic JJ cord-339886-th1da1bb 38 3 therapy therapy NN cord-339886-th1da1bb 38 4 resulted result VBD cord-339886-th1da1bb 38 5 in in IN cord-339886-th1da1bb 38 6 rapid rapid JJ cord-339886-th1da1bb 38 7 recovery recovery NN cord-339886-th1da1bb 38 8 . . . cord-339886-th1da1bb 39 1 In in IN cord-339886-th1da1bb 39 2 such such PDT cord-339886-th1da1bb 39 3 an an DT cord-339886-th1da1bb 39 4 example example NN cord-339886-th1da1bb 39 5 , , , cord-339886-th1da1bb 39 6 the the DT cord-339886-th1da1bb 39 7 costs cost NNS cord-339886-th1da1bb 39 8 are be VBP cord-339886-th1da1bb 39 9 easily easily RB cord-339886-th1da1bb 39 10 justified justify VBN cord-339886-th1da1bb 39 11 , , , cord-339886-th1da1bb 39 12 particularly particularly RB cord-339886-th1da1bb 39 13 when when WRB cord-339886-th1da1bb 39 14 offset offset VBN cord-339886-th1da1bb 39 15 against against IN cord-339886-th1da1bb 39 16 the the DT cord-339886-th1da1bb 39 17 cost cost NN cord-339886-th1da1bb 39 18 of of IN cord-339886-th1da1bb 39 19 a a DT cord-339886-th1da1bb 39 20 stay stay NN cord-339886-th1da1bb 39 21 in in IN cord-339886-th1da1bb 39 22 an an DT cord-339886-th1da1bb 39 23 intensive intensive JJ cord-339886-th1da1bb 39 24 treatment treatment NN cord-339886-th1da1bb 39 25 unit unit NN cord-339886-th1da1bb 39 26 . . . cord-339886-th1da1bb 40 1 However however RB cord-339886-th1da1bb 40 2 , , , cord-339886-th1da1bb 40 3 routine routine JJ cord-339886-th1da1bb 40 4 diagnostic diagnostic JJ cord-339886-th1da1bb 40 5 metagenomics metagenomic NNS cord-339886-th1da1bb 40 6 is be VBZ cord-339886-th1da1bb 40 7 currently currently RB cord-339886-th1da1bb 40 8 limited limit VBN cord-339886-th1da1bb 40 9 to to IN cord-339886-th1da1bb 40 10 a a DT cord-339886-th1da1bb 40 11 handful handful NN cord-339886-th1da1bb 40 12 of of IN cord-339886-th1da1bb 40 13 clinical clinical JJ cord-339886-th1da1bb 40 14 research research NN cord-339886-th1da1bb 40 15 laboratories laboratory NNS cord-339886-th1da1bb 40 16 worldwide worldwide RB cord-339886-th1da1bb 40 17 ; ; : cord-339886-th1da1bb 40 18 it -PRON- PRP cord-339886-th1da1bb 40 19 is be VBZ cord-339886-th1da1bb 40 20 therefore therefore RB cord-339886-th1da1bb 40 21 regarded regard VBN cord-339886-th1da1bb 40 22 as as IN cord-339886-th1da1bb 40 23 a a DT cord-339886-th1da1bb 40 24 ' ' `` cord-339886-th1da1bb 40 25 test test NN cord-339886-th1da1bb 40 26 of of IN cord-339886-th1da1bb 40 27 last last JJ cord-339886-th1da1bb 40 28 resort resort NN cord-339886-th1da1bb 40 29 ' ' '' cord-339886-th1da1bb 40 30 and and CC cord-339886-th1da1bb 40 31 kept keep VBD cord-339886-th1da1bb 40 32 in in IN cord-339886-th1da1bb 40 33 reserve reserve NN cord-339886-th1da1bb 40 34 for for IN cord-339886-th1da1bb 40 35 vexing vex VBG cord-339886-th1da1bb 40 36 diagnostic diagnostic JJ cord-339886-th1da1bb 40 37 conundrums conundrum NNS cord-339886-th1da1bb 40 38 . . . cord-339886-th1da1bb 41 1 Substantial substantial JJ cord-339886-th1da1bb 41 2 practical practical JJ cord-339886-th1da1bb 41 3 challenges challenge NNS cord-339886-th1da1bb 41 4 hinder hinder VBP cord-339886-th1da1bb 41 5 the the DT cord-339886-th1da1bb 41 6 adoption adoption NN cord-339886-th1da1bb 41 7 of of IN cord-339886-th1da1bb 41 8 metagenomics metagenomic NNS cord-339886-th1da1bb 41 9 for for IN cord-339886-th1da1bb 41 10 diagnostics diagnostic NNS cord-339886-th1da1bb 41 11 ( ( -LRB- cord-339886-th1da1bb 41 12 FIG fig NN cord-339886-th1da1bb 41 13 . . . cord-339886-th1da1bb 41 14 2 2 CD cord-339886-th1da1bb 41 15 ) ) -RRB- cord-339886-th1da1bb 42 1 ( ( -LRB- cord-339886-th1da1bb 42 2 reviewed review VBN cord-339886-th1da1bb 42 3 in in IN cord-339886-th1da1bb 42 4 depth depth NN cord-339886-th1da1bb 42 5 in in IN cord-339886-th1da1bb 42 6 REF REF NNP cord-339886-th1da1bb 42 7 . . . cord-339886-th1da1bb 42 8 11 11 CD cord-339886-th1da1bb 42 9 ) ) -RRB- cord-339886-th1da1bb 42 10 . . . cord-339886-th1da1bb 43 1 Chief chief JJ cord-339886-th1da1bb 43 2 among among IN cord-339886-th1da1bb 43 3 these these DT cord-339886-th1da1bb 43 4 is be VBZ cord-339886-th1da1bb 43 5 analytic analytic JJ cord-339886-th1da1bb 43 6 sensitivity sensitivity NN cord-339886-th1da1bb 43 7 , , , cord-339886-th1da1bb 43 8 which which WDT cord-339886-th1da1bb 43 9 depends depend VBZ cord-339886-th1da1bb 43 10 on on IN cord-339886-th1da1bb 43 11 pathogen pathogen NN cord-339886-th1da1bb 43 12 factors factor NNS cord-339886-th1da1bb 43 13 ( ( -LRB- cord-339886-th1da1bb 43 14 for for IN cord-339886-th1da1bb 43 15 example example NN cord-339886-th1da1bb 43 16 , , , cord-339886-th1da1bb 43 17 genome genome NN cord-339886-th1da1bb 43 18 size size NN cord-339886-th1da1bb 43 19 , , , cord-339886-th1da1bb 43 20 ease ease NN cord-339886-th1da1bb 43 21 of of IN cord-339886-th1da1bb 43 22 lysis lysis NN cord-339886-th1da1bb 43 23 and and CC cord-339886-th1da1bb 43 24 life life NN cord-339886-th1da1bb 43 25 cycle cycle NN cord-339886-th1da1bb 43 26 ) ) -RRB- cord-339886-th1da1bb 43 27 ; ; , cord-339886-th1da1bb 43 28 analytic analytic JJ cord-339886-th1da1bb 43 29 factors factor NNS cord-339886-th1da1bb 43 30 ( ( -LRB- cord-339886-th1da1bb 43 31 for for IN cord-339886-th1da1bb 43 32 example example NN cord-339886-th1da1bb 43 33 , , , cord-339886-th1da1bb 43 34 the the DT cord-339886-th1da1bb 43 35 completeness completeness NN cord-339886-th1da1bb 43 36 of of IN cord-339886-th1da1bb 43 37 reference reference NN cord-339886-th1da1bb 43 38 databases database NNS cord-339886-th1da1bb 43 39 and and CC cord-339886-th1da1bb 43 40 the the DT cord-339886-th1da1bb 43 41 potential potential NN cord-339886-th1da1bb 43 42 to to TO cord-339886-th1da1bb 43 43 mistake mistake VB cord-339886-th1da1bb 43 44 a a DT cord-339886-th1da1bb 43 45 target target NN cord-339886-th1da1bb 43 46 for for IN cord-339886-th1da1bb 43 47 a a DT cord-339886-th1da1bb 43 48 close close JJ cord-339886-th1da1bb 43 49 genetic genetic JJ cord-339886-th1da1bb 43 50 relative relative NN cord-339886-th1da1bb 43 51 ) ) -RRB- cord-339886-th1da1bb 43 52 ; ; : cord-339886-th1da1bb 43 53 and and CC cord-339886-th1da1bb 43 54 sample sample NN cord-339886-th1da1bb 43 55 factors factor NNS cord-339886-th1da1bb 43 56 ( ( -LRB- cord-339886-th1da1bb 43 57 for for IN cord-339886-th1da1bb 43 58 example example NN cord-339886-th1da1bb 43 59 , , , cord-339886-th1da1bb 43 60 pathogen pathogen NN cord-339886-th1da1bb 43 61 abundance abundance NN cord-339886-th1da1bb 43 62 within within IN cord-339886-th1da1bb 43 63 a a DT cord-339886-th1da1bb 43 64 sample sample NN cord-339886-th1da1bb 43 65 and and CC cord-339886-th1da1bb 43 66 contaminating contaminate VBG cord-339886-th1da1bb 43 67 background background NN cord-339886-th1da1bb 43 68 DNA DNA NNP cord-339886-th1da1bb 43 69 ) ) -RRB- cord-339886-th1da1bb 43 70 . . . cord-339886-th1da1bb 44 1 As as IN cord-339886-th1da1bb 44 2 an an DT cord-339886-th1da1bb 44 3 example example NN cord-339886-th1da1bb 44 4 of of IN cord-339886-th1da1bb 44 5 a a DT cord-339886-th1da1bb 44 6 problematic problematic JJ cord-339886-th1da1bb 44 7 sample sample NN cord-339886-th1da1bb 44 8 , , , cord-339886-th1da1bb 44 9 during during IN cord-339886-th1da1bb 44 10 Zika Zika NNP cord-339886-th1da1bb 44 11 surveillance surveillance NN cord-339886-th1da1bb 44 12 , , , cord-339886-th1da1bb 44 13 attempts attempt VBZ cord-339886-th1da1bb 44 14 to to TO cord-339886-th1da1bb 44 15 perform perform VB cord-339886-th1da1bb 44 16 un un NNP cord-339886-th1da1bb 44 17 targeted target VBN cord-339886-th1da1bb 44 18 metagenomics metagenomics NN cord-339886-th1da1bb 44 19 sequencing sequence VBG cord-339886-th1da1bb 44 20 on on IN cord-339886-th1da1bb 44 21 blood blood NN cord-339886-th1da1bb 44 22 yielded yield VBD cord-339886-th1da1bb 44 23 few few JJ cord-339886-th1da1bb 44 24 , , , cord-339886-th1da1bb 44 25 or or CC cord-339886-th1da1bb 44 26 in in IN cord-339886-th1da1bb 44 27 some some DT cord-339886-th1da1bb 44 28 cases case NNS cord-339886-th1da1bb 44 29 zero zero CD cord-339886-th1da1bb 44 30 , , , cord-339886-th1da1bb 44 31 reads read VBZ cord-339886-th1da1bb 44 32 owing owe VBG cord-339886-th1da1bb 44 33 to to IN cord-339886-th1da1bb 44 34 low low JJ cord-339886-th1da1bb 44 35 viral viral JJ cord-339886-th1da1bb 44 36 titres titre NNS cord-339886-th1da1bb 44 37 14 14 CD cord-339886-th1da1bb 44 38 . . . cord-339886-th1da1bb 45 1 Targetenrichment Targetenrichment NNP cord-339886-th1da1bb 45 2 technologies technology NNS cord-339886-th1da1bb 45 3 ( ( -LRB- cord-339886-th1da1bb 45 4 reviewed review VBN cord-339886-th1da1bb 45 5 in in IN cord-339886-th1da1bb 45 6 REF REF NNP cord-339886-th1da1bb 45 7 . . . cord-339886-th1da1bb 45 8 15 15 CD cord-339886-th1da1bb 45 9 ) ) -RRB- cord-339886-th1da1bb 45 10 such such JJ cord-339886-th1da1bb 45 11 as as IN cord-339886-th1da1bb 45 12 bait bait NN cord-339886-th1da1bb 45 13 probes probe NNS cord-339886-th1da1bb 45 14 can can MD cord-339886-th1da1bb 45 15 be be VB cord-339886-th1da1bb 45 16 employed employ VBN cord-339886-th1da1bb 45 17 , , , cord-339886-th1da1bb 45 18 but but CC cord-339886-th1da1bb 45 19 even even RB cord-339886-th1da1bb 45 20 these these DT cord-339886-th1da1bb 45 21 were be VBD cord-339886-th1da1bb 45 22 unsuccessful unsuccessful JJ cord-339886-th1da1bb 45 23 at at IN cord-339886-th1da1bb 45 24 recovering recover VBG cord-339886-th1da1bb 45 25 whole whole JJ cord-339886-th1da1bb 45 26 Zika Zika NNP cord-339886-th1da1bb 45 27 genomes genome NNS cord-339886-th1da1bb 45 28 , , , cord-339886-th1da1bb 45 29 necessitating necessitate VBG cord-339886-th1da1bb 45 30 PCR PCR NNP cord-339886-th1da1bb 45 31 enrichment enrichment NN cord-339886-th1da1bb 45 32 14 14 CD cord-339886-th1da1bb 45 33 . . . cord-339886-th1da1bb 46 1 In in IN cord-339886-th1da1bb 46 2 addition addition NN cord-339886-th1da1bb 46 3 to to IN cord-339886-th1da1bb 46 4 sensitivity sensitivity NN cord-339886-th1da1bb 46 5 , , , cord-339886-th1da1bb 46 6 universal universal JJ cord-339886-th1da1bb 46 7 pathogen pathogen NN cord-339886-th1da1bb 46 8 detection detection NN cord-339886-th1da1bb 46 9 through through IN cord-339886-th1da1bb 46 10 clinical clinical JJ cord-339886-th1da1bb 46 11 metagenomics metagenomic NNS cord-339886-th1da1bb 46 12 is be VBZ cord-339886-th1da1bb 46 13 complicated complicate VBN cord-339886-th1da1bb 46 14 by by IN cord-339886-th1da1bb 46 15 specificity specificity NN cord-339886-th1da1bb 46 16 issues issue NNS cord-339886-th1da1bb 46 17 arising arise VBG cord-339886-th1da1bb 46 18 from from IN cord-339886-th1da1bb 46 19 misclassification misclassification NN cord-339886-th1da1bb 46 20 or or CC cord-339886-th1da1bb 46 21 contaminated contaminated JJ cord-339886-th1da1bb 46 22 reagents reagent NNS cord-339886-th1da1bb 46 23 , , , cord-339886-th1da1bb 46 24 the the DT cord-339886-th1da1bb 46 25 challenge challenge NN cord-339886-th1da1bb 46 26 of of IN cord-339886-th1da1bb 46 27 reproducing reproduce VBG cord-339886-th1da1bb 46 28 results result NNS cord-339886-th1da1bb 46 29 from from IN cord-339886-th1da1bb 46 30 a a DT cord-339886-th1da1bb 46 31 complex complex JJ cord-339886-th1da1bb 46 32 clinical clinical JJ cord-339886-th1da1bb 46 33 workflow workflow NN cord-339886-th1da1bb 46 34 , , , cord-339886-th1da1bb 46 35 nucleic nucleic JJ cord-339886-th1da1bb 46 36 acid acid NN cord-339886-th1da1bb 46 37 stability stability NN cord-339886-th1da1bb 46 38 under under IN cord-339886-th1da1bb 46 39 varying vary VBG cord-339886-th1da1bb 46 40 assay assay NN cord-339886-th1da1bb 46 41 conditions condition NNS cord-339886-th1da1bb 46 42 , , , cord-339886-th1da1bb 46 43 ever ever RB cord-339886-th1da1bb 46 44 - - HYPH cord-339886-th1da1bb 46 45 changing change VBG cord-339886-th1da1bb 46 46 bioinformatics bioinformatics NN cord-339886-th1da1bb 46 47 workflows workflow NNS cord-339886-th1da1bb 46 48 and and CC cord-339886-th1da1bb 46 49 cost cost NN cord-339886-th1da1bb 46 50 . . . cord-339886-th1da1bb 47 1 Given give VBN cord-339886-th1da1bb 47 2 these these DT cord-339886-th1da1bb 47 3 issues issue NNS cord-339886-th1da1bb 47 4 , , , cord-339886-th1da1bb 47 5 could could MD cord-339886-th1da1bb 47 6 metagenomics metagenomic NNS cord-339886-th1da1bb 47 7 replace replace VB cord-339886-th1da1bb 47 8 conventional conventional JJ cord-339886-th1da1bb 47 9 microbiological microbiological JJ cord-339886-th1da1bb 47 10 and and CC cord-339886-th1da1bb 47 11 molecular molecular JJ cord-339886-th1da1bb 47 12 tests test NNS cord-339886-th1da1bb 47 13 for for IN cord-339886-th1da1bb 47 14 infection infection NN cord-339886-th1da1bb 47 15 ? ? . cord-339886-th1da1bb 48 1 Recent recent JJ cord-339886-th1da1bb 48 2 studies study NNS cord-339886-th1da1bb 48 3 have have VBP cord-339886-th1da1bb 48 4 used use VBN cord-339886-th1da1bb 48 5 metagenomics metagenomic NNS cord-339886-th1da1bb 48 6 in in IN cord-339886-th1da1bb 48 7 common common JJ cord-339886-th1da1bb 48 8 presentations presentation NNS cord-339886-th1da1bb 48 9 , , , cord-339886-th1da1bb 48 10 including include VBG cord-339886-th1da1bb 48 11 sepsis sepsis NN cord-339886-th1da1bb 48 12 16 16 CD cord-339886-th1da1bb 48 13 , , , cord-339886-th1da1bb 48 14 pneumonia pneumonia NN cord-339886-th1da1bb 48 15 17 17 CD cord-339886-th1da1bb 48 16 , , , cord-339886-th1da1bb 48 17 urinary urinary JJ cord-339886-th1da1bb 48 18 tract tract NN cord-339886-th1da1bb 48 19 infections infection NNS cord-339886-th1da1bb 48 20 18 18 CD cord-339886-th1da1bb 48 21 and and CC cord-339886-th1da1bb 48 22 eye eye NN cord-339886-th1da1bb 48 23 infections infection NNS cord-339886-th1da1bb 48 24 19 19 CD cord-339886-th1da1bb 48 25 . . . cord-339886-th1da1bb 49 1 These these DT cord-339886-th1da1bb 49 2 have have VBP cord-339886-th1da1bb 49 3 generally generally RB cord-339886-th1da1bb 49 4 yielded yield VBN cord-339886-th1da1bb 49 5 promising promising JJ cord-339886-th1da1bb 49 6 results result NNS cord-339886-th1da1bb 49 7 , , , cord-339886-th1da1bb 49 8 albeit albeit IN cord-339886-th1da1bb 49 9 typically typically RB cord-339886-th1da1bb 49 10 at at IN cord-339886-th1da1bb 49 11 a a DT cord-339886-th1da1bb 49 12 lower low JJR cord-339886-th1da1bb 49 13 sensitivity sensitivity NN cord-339886-th1da1bb 49 14 than than IN cord-339886-th1da1bb 49 15 conventional conventional JJ cord-339886-th1da1bb 49 16 tests test NNS cord-339886-th1da1bb 49 17 and and CC cord-339886-th1da1bb 49 18 at at IN cord-339886-th1da1bb 49 19 a a DT cord-339886-th1da1bb 49 20 much much RB cord-339886-th1da1bb 49 21 greater great JJR cord-339886-th1da1bb 49 22 cost cost NN cord-339886-th1da1bb 49 23 . . . cord-339886-th1da1bb 50 1 Despite despite IN cord-339886-th1da1bb 50 2 these these DT cord-339886-th1da1bb 50 3 problems problem NNS cord-339886-th1da1bb 50 4 , , , cord-339886-th1da1bb 50 5 two two CD cord-339886-th1da1bb 50 6 factors factor NNS cord-339886-th1da1bb 50 7 will will MD cord-339886-th1da1bb 50 8 drive drive VB cord-339886-th1da1bb 50 9 sequencing sequence VBG cord-339886-th1da1bb 50 10 to to TO cord-339886-th1da1bb 50 11 eventually eventually RB cord-339886-th1da1bb 50 12 become become VB cord-339886-th1da1bb 50 13 routine routine JJ cord-339886-th1da1bb 50 14 clinical clinical JJ cord-339886-th1da1bb 50 15 practice practice NN cord-339886-th1da1bb 50 16 . . . cord-339886-th1da1bb 51 1 First first RB cord-339886-th1da1bb 51 2 , , , cord-339886-th1da1bb 51 3 the the DT cord-339886-th1da1bb 51 4 ever ever RB cord-339886-th1da1bb 51 5 - - HYPH cord-339886-th1da1bb 51 6 decreasing decrease VBG cord-339886-th1da1bb 51 7 cost cost NN cord-339886-th1da1bb 51 8 of of IN cord-339886-th1da1bb 51 9 sequencing sequencing NN cord-339886-th1da1bb 51 10 coupled couple VBN cord-339886-th1da1bb 51 11 with with IN cord-339886-th1da1bb 51 12 the the DT cord-339886-th1da1bb 51 13 potential potential NN cord-339886-th1da1bb 51 14 for for IN cord-339886-th1da1bb 51 15 cost cost NN cord-339886-th1da1bb 51 16 savings saving NNS cord-339886-th1da1bb 51 17 achieved achieve VBN cord-339886-th1da1bb 51 18 by by IN cord-339886-th1da1bb 51 19 using use VBG cord-339886-th1da1bb 51 20 a a DT cord-339886-th1da1bb 51 21 single single JJ cord-339886-th1da1bb 51 22 diagnostic diagnostic JJ cord-339886-th1da1bb 51 23 modality modality NN cord-339886-th1da1bb 51 24 versus versus IN cord-339886-th1da1bb 51 25 tens ten NNS cord-339886-th1da1bb 51 26 or or CC cord-339886-th1da1bb 51 27 hundreds hundred NNS cord-339886-th1da1bb 51 28 of of IN cord-339886-th1da1bb 51 29 different different JJ cord-339886-th1da1bb 51 30 diagnostic diagnostic JJ cord-339886-th1da1bb 51 31 assays assay NNS cord-339886-th1da1bb 51 32 -each -each : cord-339886-th1da1bb 51 33 potentially potentially RB cord-339886-th1da1bb 51 34 requiring require VBG cord-339886-th1da1bb 51 35 specific specific JJ cord-339886-th1da1bb 51 36 instrumentation instrumentation NN cord-339886-th1da1bb 51 37 , , , cord-339886-th1da1bb 51 38 reagents reagent NNS cord-339886-th1da1bb 51 39 , , , cord-339886-th1da1bb 51 40 validation validation NN cord-339886-th1da1bb 51 41 and and CC cord-339886-th1da1bb 51 42 labour labour NN cord-339886-th1da1bb 51 43 -is -is : cord-339886-th1da1bb 51 44 attractive attractive JJ cord-339886-th1da1bb 51 45 from from IN cord-339886-th1da1bb 51 46 a a DT cord-339886-th1da1bb 51 47 laboratory laboratory NN cord-339886-th1da1bb 51 48 operations operation NNS cord-339886-th1da1bb 51 49 perspective perspective NN cord-339886-th1da1bb 51 50 . . . cord-339886-th1da1bb 52 1 Second second JJ cord-339886-th1da1bb 52 2 , , , cord-339886-th1da1bb 52 3 and and CC cord-339886-th1da1bb 52 4 perhaps perhaps RB cord-339886-th1da1bb 52 5 most most RBS cord-339886-th1da1bb 52 6 compelling compelling JJ cord-339886-th1da1bb 52 7 , , , cord-339886-th1da1bb 52 8 is be VBZ cord-339886-th1da1bb 52 9 the the DT cord-339886-th1da1bb 52 10 additional additional JJ cord-339886-th1da1bb 52 11 information information NN cord-339886-th1da1bb 52 12 afforded afford VBN cord-339886-th1da1bb 52 13 by by IN cord-339886-th1da1bb 52 14 genomics genomic NNS cord-339886-th1da1bb 52 15 , , , cord-339886-th1da1bb 52 16 including include VBG cord-339886-th1da1bb 52 17 the the DT cord-339886-th1da1bb 52 18 ability ability NN cord-339886-th1da1bb 52 19 to to TO cord-339886-th1da1bb 52 20 predict predict VB cord-339886-th1da1bb 52 21 virulence virulence NN cord-339886-th1da1bb 52 22 or or CC cord-339886-th1da1bb 52 23 drug drug NN cord-339886-th1da1bb 52 24 resistance resistance NN cord-339886-th1da1bb 52 25 phenotypes phenotype NNS cord-339886-th1da1bb 52 26 , , , cord-339886-th1da1bb 52 27 the the DT cord-339886-th1da1bb 52 28 ability ability NN cord-339886-th1da1bb 52 29 to to TO cord-339886-th1da1bb 52 30 detect detect VB cord-339886-th1da1bb 52 31 polymicrobial polymicrobial JJ cord-339886-th1da1bb 52 32 infections infection NNS cord-339886-th1da1bb 52 33 and and CC cord-339886-th1da1bb 52 34 phylogenetic phylogenetic JJ cord-339886-th1da1bb 52 35 reconstruction reconstruction NN cord-339886-th1da1bb 52 36 for for IN cord-339886-th1da1bb 52 37 outbreak outbreak NN cord-339886-th1da1bb 52 38 analysis analysis NN cord-339886-th1da1bb 52 39 . . . cord-339886-th1da1bb 53 1 Novel novel JJ cord-339886-th1da1bb 53 2 technologies technology NNS cord-339886-th1da1bb 53 3 : : : cord-339886-th1da1bb 53 4 portable portable JJ cord-339886-th1da1bb 53 5 sequencing sequencing NN cord-339886-th1da1bb 53 6 . . . cord-339886-th1da1bb 54 1 Given give VBN cord-339886-th1da1bb 54 2 that that IN cord-339886-th1da1bb 54 3 outbreaks outbreak NNS cord-339886-th1da1bb 54 4 of of IN cord-339886-th1da1bb 54 5 emerging emerge VBG cord-339886-th1da1bb 54 6 infectious infectious JJ cord-339886-th1da1bb 54 7 diseases disease NNS cord-339886-th1da1bb 54 8 ( ( -LRB- cord-339886-th1da1bb 54 9 EIDs eid NNS cord-339886-th1da1bb 54 10 ) ) -RRB- cord-339886-th1da1bb 54 11 most most RBS cord-339886-th1da1bb 54 12 often often RB cord-339886-th1da1bb 54 13 occur occur VBP cord-339886-th1da1bb 54 14 in in IN cord-339886-th1da1bb 54 15 settings setting NNS cord-339886-th1da1bb 54 16 with with IN cord-339886-th1da1bb 54 17 minimal minimal JJ cord-339886-th1da1bb 54 18 laboratory laboratory NN cord-339886-th1da1bb 54 19 capacity capacity NN cord-339886-th1da1bb 54 20 , , , cord-339886-th1da1bb 54 21 where where WRB cord-339886-th1da1bb 54 22 routine routine JJ cord-339886-th1da1bb 54 23 culture culture NN cord-339886-th1da1bb 54 24 and and CC cord-339886-th1da1bb 54 25 bench bench NN cord-339886-th1da1bb 54 26 - - HYPH cord-339886-th1da1bb 54 27 top top NN cord-339886-th1da1bb 54 28 sequencing sequencing NN cord-339886-th1da1bb 54 29 are be VBP cord-339886-th1da1bb 54 30 simply simply RB cord-339886-th1da1bb 54 31 not not RB cord-339886-th1da1bb 54 32 feasible feasible JJ cord-339886-th1da1bb 54 33 , , , cord-339886-th1da1bb 54 34 the the DT cord-339886-th1da1bb 54 35 need need NN cord-339886-th1da1bb 54 36 for for IN cord-339886-th1da1bb 54 37 a a DT cord-339886-th1da1bb 54 38 portable portable JJ cord-339886-th1da1bb 54 39 diagnostic diagnostic JJ cord-339886-th1da1bb 54 40 platform platform NN cord-339886-th1da1bb 54 41 capable capable JJ cord-339886-th1da1bb 54 42 of of IN cord-339886-th1da1bb 54 43 in in IN cord-339886-th1da1bb 54 44 situ situ JJ cord-339886-th1da1bb 54 45 clinical clinical JJ cord-339886-th1da1bb 54 46 metagenomics metagenomic NNS cord-339886-th1da1bb 54 47 and and CC cord-339886-th1da1bb 54 48 outbreak outbreak NN cord-339886-th1da1bb 54 49 surveillance surveillance NN cord-339886-th1da1bb 54 50 is be VBZ cord-339886-th1da1bb 54 51 evident evident JJ cord-339886-th1da1bb 54 52 . . . cord-339886-th1da1bb 55 1 A a DT cord-339886-th1da1bb 55 2 trend trend NN cord-339886-th1da1bb 55 3 towards towards IN cord-339886-th1da1bb 55 4 smaller small JJR cord-339886-th1da1bb 55 5 and and CC cord-339886-th1da1bb 55 6 less less RBR cord-339886-th1da1bb 55 7 expensive expensive JJ cord-339886-th1da1bb 55 8 bench bench NN cord-339886-th1da1bb 55 9 - - HYPH cord-339886-th1da1bb 55 10 top top NN cord-339886-th1da1bb 55 11 sequencing sequencing NN cord-339886-th1da1bb 55 12 instruments instrument NNS cord-339886-th1da1bb 55 13 was be VBD cord-339886-th1da1bb 55 14 seen see VBN cord-339886-th1da1bb 55 15 with with IN cord-339886-th1da1bb 55 16 the the DT cord-339886-th1da1bb 55 17 454 454 CD cord-339886-th1da1bb 55 18 Genome Genome NNP cord-339886-th1da1bb 55 19 Sequencer Sequencer NNP cord-339886-th1da1bb 55 20 Junior Junior NNP cord-339886-th1da1bb 55 21 system system NN cord-339886-th1da1bb 55 22 ( ( -LRB- cord-339886-th1da1bb 55 23 which which WDT cord-339886-th1da1bb 55 24 has have VBZ cord-339886-th1da1bb 55 25 since since IN cord-339886-th1da1bb 55 26 been be VBN cord-339886-th1da1bb 55 27 discontinued discontinue VBN cord-339886-th1da1bb 55 28 ) ) -RRB- cord-339886-th1da1bb 55 29 , , , cord-339886-th1da1bb 55 30 the the DT cord-339886-th1da1bb 55 31 Ion Ion NNP cord-339886-th1da1bb 55 32 Torrent Torrent NNP cord-339886-th1da1bb 55 33 Personal Personal NNP cord-339886-th1da1bb 55 34 Genome Genome NNP cord-339886-th1da1bb 55 35 Machine Machine NNP cord-339886-th1da1bb 55 36 ( ( -LRB- cord-339886-th1da1bb 55 37 PGM PGM NNP cord-339886-th1da1bb 55 38 ) ) -RRB- cord-339886-th1da1bb 55 39 system system NN cord-339886-th1da1bb 55 40 and and CC cord-339886-th1da1bb 55 41 the the DT cord-339886-th1da1bb 55 42 Illumina Illumina NNP cord-339886-th1da1bb 55 43 MiSeq MiSeq NNP cord-339886-th1da1bb 55 44 system system NN cord-339886-th1da1bb 55 45 , , , cord-339886-th1da1bb 55 46 which which WDT cord-339886-th1da1bb 55 47 were be VBD cord-339886-th1da1bb 55 48 released release VBN cord-339886-th1da1bb 55 49 in in IN cord-339886-th1da1bb 55 50 close close JJ cord-339886-th1da1bb 55 51 succession succession NN cord-339886-th1da1bb 55 52 20 20 CD cord-339886-th1da1bb 55 53 . . . cord-339886-th1da1bb 56 1 Each each DT cord-339886-th1da1bb 56 2 of of IN cord-339886-th1da1bb 56 3 these these DT cord-339886-th1da1bb 56 4 instruments instrument NNS cord-339886-th1da1bb 56 5 costs cost VBZ cord-339886-th1da1bb 56 6 < < XX cord-339886-th1da1bb 56 7 $ $ $ cord-339886-th1da1bb 56 8 150,000 150,000 CD cord-339886-th1da1bb 56 9 and and CC cord-339886-th1da1bb 56 10 puts put VBZ cord-339886-th1da1bb 56 11 NGS NGS NNP cord-339886-th1da1bb 56 12 capability capability NN cord-339886-th1da1bb 56 13 into into IN cord-339886-th1da1bb 56 14 the the DT cord-339886-th1da1bb 56 15 hands hand NNS cord-339886-th1da1bb 56 16 of of IN cord-339886-th1da1bb 56 17 smaller small JJR cord-339886-th1da1bb 56 18 laboratories laboratory NNS cord-339886-th1da1bb 56 19 , , , cord-339886-th1da1bb 56 20 including include VBG cord-339886-th1da1bb 56 21 clinical clinical JJ cord-339886-th1da1bb 56 22 settings setting NNS cord-339886-th1da1bb 56 23 . . . cord-339886-th1da1bb 57 1 In in IN cord-339886-th1da1bb 57 2 2014 2014 CD cord-339886-th1da1bb 57 3 , , , cord-339886-th1da1bb 57 4 the the DT cord-339886-th1da1bb 57 5 MinION minion NN cord-339886-th1da1bb 57 6 from from IN cord-339886-th1da1bb 57 7 Oxford Oxford NNP cord-339886-th1da1bb 57 8 Nanopore Nanopore NNP cord-339886-th1da1bb 57 9 Technologies Technologies NNP cord-339886-th1da1bb 57 10 was be VBD cord-339886-th1da1bb 57 11 released release VBN cord-339886-th1da1bb 57 12 to to IN cord-339886-th1da1bb 57 13 early early JJ cord-339886-th1da1bb 57 14 access access NN cord-339886-th1da1bb 57 15 users user NNS cord-339886-th1da1bb 57 16 21 21 CD cord-339886-th1da1bb 57 17 , , , cord-339886-th1da1bb 57 18 heralding herald VBG cord-339886-th1da1bb 57 19 the the DT cord-339886-th1da1bb 57 20 potential potential JJ cord-339886-th1da1bb 57 21 Nature Nature NNP cord-339886-th1da1bb 57 22 Reviews Reviews NNPS cord-339886-th1da1bb 57 23 | | SYM cord-339886-th1da1bb 57 24 Genetics Genetics NNP cord-339886-th1da1bb 57 25 Outbreak Outbreak NNP cord-339886-th1da1bb 57 26 Response Response NNP cord-339886-th1da1bb 57 27 Portable Portable NNP cord-339886-th1da1bb 57 28 genome genome NN cord-339886-th1da1bb 57 29 sequencing sequence VBG cord-339886-th1da1bb 57 30 Digital Digital NNP cord-339886-th1da1bb 57 31 epidemiology epidemiology NN cord-339886-th1da1bb 58 1 One one CD cord-339886-th1da1bb 58 2 Health Health NNP cord-339886-th1da1bb 58 3 Figure Figure NNP cord-339886-th1da1bb 58 4 1 1 CD cord-339886-th1da1bb 58 5 | | NNP cord-339886-th1da1bb 58 6 A a DT cord-339886-th1da1bb 58 7 genomics genomics NN cord-339886-th1da1bb 58 8 - - HYPH cord-339886-th1da1bb 58 9 informed inform VBN cord-339886-th1da1bb 58 10 surveillance surveillance NN cord-339886-th1da1bb 58 11 and and CC cord-339886-th1da1bb 58 12 outbreak outbreak NN cord-339886-th1da1bb 58 13 response response NN cord-339886-th1da1bb 58 14 model model NN cord-339886-th1da1bb 58 15 . . . cord-339886-th1da1bb 59 1 Portable portable JJ cord-339886-th1da1bb 59 2 genome genome NN cord-339886-th1da1bb 59 3 sequencing sequencing NN cord-339886-th1da1bb 59 4 technology technology NN cord-339886-th1da1bb 59 5 and and CC cord-339886-th1da1bb 59 6 digital digital JJ cord-339886-th1da1bb 59 7 epidemiology epidemiology NN cord-339886-th1da1bb 59 8 platforms platform NNS cord-339886-th1da1bb 59 9 form form VBP cord-339886-th1da1bb 59 10 the the DT cord-339886-th1da1bb 59 11 foundation foundation NN cord-339886-th1da1bb 59 12 for for IN cord-339886-th1da1bb 59 13 both both DT cord-339886-th1da1bb 59 14 real real JJ cord-339886-th1da1bb 59 15 - - HYPH cord-339886-th1da1bb 59 16 time time NN cord-339886-th1da1bb 59 17 pathogen pathogen NN cord-339886-th1da1bb 59 18 and and CC cord-339886-th1da1bb 59 19 disease disease NN cord-339886-th1da1bb 59 20 surveillance surveillance NN cord-339886-th1da1bb 59 21 systems system NNS cord-339886-th1da1bb 59 22 and and CC cord-339886-th1da1bb 59 23 outbreak outbreak NN cord-339886-th1da1bb 59 24 response response NN cord-339886-th1da1bb 59 25 efforts effort NNS cord-339886-th1da1bb 59 26 , , , cord-339886-th1da1bb 59 27 all all DT cord-339886-th1da1bb 59 28 of of IN cord-339886-th1da1bb 59 29 which which WDT cord-339886-th1da1bb 59 30 exist exist VBP cord-339886-th1da1bb 59 31 within within IN cord-339886-th1da1bb 59 32 the the DT cord-339886-th1da1bb 59 33 One One NNP cord-339886-th1da1bb 59 34 Health Health NNP cord-339886-th1da1bb 59 35 context context NN cord-339886-th1da1bb 59 36 , , , cord-339886-th1da1bb 59 37 in in IN cord-339886-th1da1bb 59 38 which which WDT cord-339886-th1da1bb 59 39 surveillance surveillance NN cord-339886-th1da1bb 59 40 , , , cord-339886-th1da1bb 59 41 outbreak outbreak NN cord-339886-th1da1bb 59 42 detection detection NN cord-339886-th1da1bb 59 43 and and CC cord-339886-th1da1bb 59 44 response response NN cord-339886-th1da1bb 59 45 span span VBP cord-339886-th1da1bb 59 46 the the DT cord-339886-th1da1bb 59 47 human human NN cord-339886-th1da1bb 59 48 , , , cord-339886-th1da1bb 59 49 animal animal NN cord-339886-th1da1bb 59 50 and and CC cord-339886-th1da1bb 59 51 environmental environmental JJ cord-339886-th1da1bb 59 52 health health NN cord-339886-th1da1bb 59 53 domains domain NNS cord-339886-th1da1bb 59 54 . . . cord-339886-th1da1bb 60 1 The the DT cord-339886-th1da1bb 60 2 event event NN cord-339886-th1da1bb 60 3 through through IN cord-339886-th1da1bb 60 4 which which WDT cord-339886-th1da1bb 60 5 a a DT cord-339886-th1da1bb 60 6 pathogen pathogen NN cord-339886-th1da1bb 60 7 is be VBZ cord-339886-th1da1bb 60 8 transferred transfer VBN cord-339886-th1da1bb 60 9 from from IN cord-339886-th1da1bb 60 10 one one CD cord-339886-th1da1bb 60 11 entity entity NN cord-339886-th1da1bb 60 12 to to IN cord-339886-th1da1bb 60 13 another another DT cord-339886-th1da1bb 60 14 . . . cord-339886-th1da1bb 61 1 Transmission transmission NN cord-339886-th1da1bb 61 2 can can MD cord-339886-th1da1bb 61 3 be be VB cord-339886-th1da1bb 61 4 person person NN cord-339886-th1da1bb 61 5 - - HYPH cord-339886-th1da1bb 61 6 to to IN cord-339886-th1da1bb 61 7 - - HYPH cord-339886-th1da1bb 61 8 person person NN cord-339886-th1da1bb 61 9 , , , cord-339886-th1da1bb 61 10 as as IN cord-339886-th1da1bb 61 11 in in IN cord-339886-th1da1bb 61 12 the the DT cord-339886-th1da1bb 61 13 case case NN cord-339886-th1da1bb 61 14 of of IN cord-339886-th1da1bb 61 15 Ebola Ebola NNP cord-339886-th1da1bb 61 16 , , , cord-339886-th1da1bb 61 17 vector vector NN cord-339886-th1da1bb 61 18 - - HYPH cord-339886-th1da1bb 61 19 to to IN cord-339886-th1da1bb 61 20 - - HYPH cord-339886-th1da1bb 61 21 person person NN cord-339886-th1da1bb 61 22 , , , cord-339886-th1da1bb 61 23 as as IN cord-339886-th1da1bb 61 24 with with IN cord-339886-th1da1bb 61 25 Zika Zika NNP cord-339886-th1da1bb 61 26 , , , cord-339886-th1da1bb 61 27 or or CC cord-339886-th1da1bb 61 28 environment environment NN cord-339886-th1da1bb 61 29 - - HYPH cord-339886-th1da1bb 61 30 to to IN cord-339886-th1da1bb 61 31 - - HYPH cord-339886-th1da1bb 61 32 person person NN cord-339886-th1da1bb 61 33 via via IN cord-339886-th1da1bb 61 34 routes route NNS cord-339886-th1da1bb 61 35 including include VBG cord-339886-th1da1bb 61 36 food food NN cord-339886-th1da1bb 61 37 , , , cord-339886-th1da1bb 61 38 water water NN cord-339886-th1da1bb 61 39 and and CC cord-339886-th1da1bb 61 40 contact contact NN cord-339886-th1da1bb 61 41 with with IN cord-339886-th1da1bb 61 42 a a DT cord-339886-th1da1bb 61 43 contaminated contaminate VBN cord-339886-th1da1bb 61 44 object object NN cord-339886-th1da1bb 61 45 or or CC cord-339886-th1da1bb 61 46 surface surface NN cord-339886-th1da1bb 61 47 . . . cord-339886-th1da1bb 62 1 The the DT cord-339886-th1da1bb 62 2 use use NN cord-339886-th1da1bb 62 3 of of IN cord-339886-th1da1bb 62 4 genome genome NN cord-339886-th1da1bb 62 5 sequencing sequencing NN cord-339886-th1da1bb 62 6 to to TO cord-339886-th1da1bb 62 7 understand understand VB cord-339886-th1da1bb 62 8 infectious infectious JJ cord-339886-th1da1bb 62 9 disease disease NN cord-339886-th1da1bb 62 10 transmission transmission NN cord-339886-th1da1bb 62 11 and and CC cord-339886-th1da1bb 62 12 epidemiology epidemiology NN cord-339886-th1da1bb 62 13 . . . cord-339886-th1da1bb 63 1 See see VB cord-339886-th1da1bb 63 2 FIG fig NN cord-339886-th1da1bb 63 3 . . . cord-339886-th1da1bb 64 1 3 3 LS cord-339886-th1da1bb 64 2 . . . cord-339886-th1da1bb 65 1 for for IN cord-339886-th1da1bb 65 2 highly highly RB cord-339886-th1da1bb 65 3 portable portable JJ cord-339886-th1da1bb 65 4 ' ' '' cord-339886-th1da1bb 65 5 lab lab NN cord-339886-th1da1bb 65 6 - - HYPH cord-339886-th1da1bb 65 7 in in IN cord-339886-th1da1bb 65 8 - - HYPH cord-339886-th1da1bb 65 9 a a DT cord-339886-th1da1bb 65 10 - - HYPH cord-339886-th1da1bb 65 11 suitcase suitcase NN cord-339886-th1da1bb 65 12 ' ' '' cord-339886-th1da1bb 65 13 sequencing sequencing NN cord-339886-th1da1bb 65 14 . . . cord-339886-th1da1bb 66 1 The the DT cord-339886-th1da1bb 66 2 MinION minion NN cord-339886-th1da1bb 66 3 is be VBZ cord-339886-th1da1bb 66 4 pocket pocket NN cord-339886-th1da1bb 66 5 - - HYPH cord-339886-th1da1bb 66 6 sized sized JJ cord-339886-th1da1bb 66 7 and and CC cord-339886-th1da1bb 66 8 is be VBZ cord-339886-th1da1bb 66 9 controlled control VBN cord-339886-th1da1bb 66 10 and and CC cord-339886-th1da1bb 66 11 powered power VBN cord-339886-th1da1bb 66 12 through through IN cord-339886-th1da1bb 66 13 a a DT cord-339886-th1da1bb 66 14 laptop laptop NN cord-339886-th1da1bb 66 15 USB usb NN cord-339886-th1da1bb 66 16 connection connection NN cord-339886-th1da1bb 66 17 . . . cord-339886-th1da1bb 67 1 It -PRON- PRP cord-339886-th1da1bb 67 2 is be VBZ cord-339886-th1da1bb 67 3 provided provide VBN cord-339886-th1da1bb 67 4 under under IN cord-339886-th1da1bb 67 5 a a DT cord-339886-th1da1bb 67 6 model model NN cord-339886-th1da1bb 67 7 whereby whereby WRB cord-339886-th1da1bb 67 8 the the DT cord-339886-th1da1bb 67 9 hardware hardware NN cord-339886-th1da1bb 67 10 is be VBZ cord-339886-th1da1bb 67 11 free free JJ cord-339886-th1da1bb 67 12 but but CC cord-339886-th1da1bb 67 13 the the DT cord-339886-th1da1bb 67 14 consumer consumer NN cord-339886-th1da1bb 67 15 pays pay VBZ cord-339886-th1da1bb 67 16 a a DT cord-339886-th1da1bb 67 17 premium premium NN cord-339886-th1da1bb 67 18 for for IN cord-339886-th1da1bb 67 19 the the DT cord-339886-th1da1bb 67 20 reagent reagent NN cord-339886-th1da1bb 67 21 and and CC cord-339886-th1da1bb 67 22 flow flow NN cord-339886-th1da1bb 67 23 cell cell NN cord-339886-th1da1bb 67 24 consumables consumable NNS cord-339886-th1da1bb 67 25 . . . cord-339886-th1da1bb 68 1 Compared compare VBN cord-339886-th1da1bb 68 2 with with IN cord-339886-th1da1bb 68 3 bench bench NN cord-339886-th1da1bb 68 4 - - HYPH cord-339886-th1da1bb 68 5 top top NN cord-339886-th1da1bb 68 6 instruments instrument NNS cord-339886-th1da1bb 68 7 , , , cord-339886-th1da1bb 68 8 the the DT cord-339886-th1da1bb 68 9 absence absence NN cord-339886-th1da1bb 68 10 of of IN cord-339886-th1da1bb 68 11 a a DT cord-339886-th1da1bb 68 12 rolling rolling JJ cord-339886-th1da1bb 68 13 service service NN cord-339886-th1da1bb 68 14 contract contract NN cord-339886-th1da1bb 68 15 or or CC cord-339886-th1da1bb 68 16 regular regular JJ cord-339886-th1da1bb 68 17 engineer engineer NN cord-339886-th1da1bb 68 18 visits visit NNS cord-339886-th1da1bb 68 19 makes make VBZ cord-339886-th1da1bb 68 20 it -PRON- PRP cord-339886-th1da1bb 68 21 theoretically theoretically RB cord-339886-th1da1bb 68 22 possible possible JJ cord-339886-th1da1bb 68 23 to to TO cord-339886-th1da1bb 68 24 scale scale VB cord-339886-th1da1bb 68 25 this this DT cord-339886-th1da1bb 68 26 platform platform NN cord-339886-th1da1bb 68 27 out out RP cord-339886-th1da1bb 68 28 to to IN cord-339886-th1da1bb 68 29 potentially potentially RB cord-339886-th1da1bb 68 30 unlimited unlimited JJ cord-339886-th1da1bb 68 31 numbers number NNS cord-339886-th1da1bb 68 32 of of IN cord-339886-th1da1bb 68 33 labora labora NNP cord-339886-th1da1bb 68 34 tories tory NNS cord-339886-th1da1bb 68 35 . . . cord-339886-th1da1bb 69 1 Importantly importantly RB cord-339886-th1da1bb 69 2 , , , cord-339886-th1da1bb 69 3 the the DT cord-339886-th1da1bb 69 4 MinION minion NN cord-339886-th1da1bb 69 5 has have VBZ cord-339886-th1da1bb 69 6 been be VBN cord-339886-th1da1bb 69 7 used use VBN cord-339886-th1da1bb 69 8 in in IN cord-339886-th1da1bb 69 9 field field NN cord-339886-th1da1bb 69 10 situations situation NNS cord-339886-th1da1bb 69 11 , , , cord-339886-th1da1bb 69 12 including include VBG cord-339886-th1da1bb 69 13 in in IN cord-339886-th1da1bb 69 14 diagnostic diagnostic JJ cord-339886-th1da1bb 69 15 tent tent NN cord-339886-th1da1bb 69 16 labora labora NNP cord-339886-th1da1bb 69 17 tories tory NNS cord-339886-th1da1bb 69 18 during during IN cord-339886-th1da1bb 69 19 the the DT cord-339886-th1da1bb 69 20 Ebola Ebola NNP cord-339886-th1da1bb 69 21 epidemic epidemic NN cord-339886-th1da1bb 69 22 22 22 CD cord-339886-th1da1bb 69 23 , , , cord-339886-th1da1bb 69 24 23 23 CD cord-339886-th1da1bb 69 25 and and CC cord-339886-th1da1bb 69 26 in in IN cord-339886-th1da1bb 69 27 a a DT cord-339886-th1da1bb 69 28 roving rove VBG cord-339886-th1da1bb 69 29 busbased busbased JJ cord-339886-th1da1bb 69 30 mobile mobile JJ cord-339886-th1da1bb 69 31 laboratory laboratory NN cord-339886-th1da1bb 69 32 in in IN cord-339886-th1da1bb 69 33 Brazil Brazil NNP cord-339886-th1da1bb 69 34 as as IN cord-339886-th1da1bb 69 35 part part NN cord-339886-th1da1bb 69 36 of of IN cord-339886-th1da1bb 69 37 the the DT cord-339886-th1da1bb 69 38 ZiBRA ZiBRA NNP cord-339886-th1da1bb 69 39 project project NN cord-339886-th1da1bb 69 40 3 3 CD cord-339886-th1da1bb 69 41 , , , cord-339886-th1da1bb 69 42 24 24 CD cord-339886-th1da1bb 69 43 . . . cord-339886-th1da1bb 70 1 Others other NNS cord-339886-th1da1bb 70 2 have have VBP cord-339886-th1da1bb 70 3 taken take VBN cord-339886-th1da1bb 70 4 the the DT cord-339886-th1da1bb 70 5 MinION minion NN cord-339886-th1da1bb 70 6 to to IN cord-339886-th1da1bb 70 7 more more RBR cord-339886-th1da1bb 70 8 extreme extreme JJ cord-339886-th1da1bb 70 9 environments environment NNS cord-339886-th1da1bb 70 10 where where WRB cord-339886-th1da1bb 70 11 even even RB cord-339886-th1da1bb 70 12 the the DT cord-339886-th1da1bb 70 13 smallest small JJS cord-339886-th1da1bb 70 14 traditional traditional JJ cord-339886-th1da1bb 70 15 bench bench NN cord-339886-th1da1bb 70 16 - - HYPH cord-339886-th1da1bb 70 17 top top NN cord-339886-th1da1bb 70 18 sequencer sequencer NN cord-339886-th1da1bb 70 19 could could MD cord-339886-th1da1bb 70 20 not not RB cord-339886-th1da1bb 70 21 go go VB cord-339886-th1da1bb 70 22 , , , cord-339886-th1da1bb 70 23 including include VBG cord-339886-th1da1bb 70 24 the the DT cord-339886-th1da1bb 70 25 Arctic Arctic NNP cord-339886-th1da1bb 70 26 25 25 CD cord-339886-th1da1bb 70 27 and and CC cord-339886-th1da1bb 70 28 Antarctic Antarctic NNP cord-339886-th1da1bb 70 29 26 26 CD cord-339886-th1da1bb 70 30 , , , cord-339886-th1da1bb 70 31 a a DT cord-339886-th1da1bb 70 32 deep deep JJ cord-339886-th1da1bb 70 33 mine mine NN cord-339886-th1da1bb 70 34 27 27 CD cord-339886-th1da1bb 70 35 and and CC cord-339886-th1da1bb 70 36 zero zero CD cord-339886-th1da1bb 70 37 gravity gravity NN cord-339886-th1da1bb 70 38 aboard aboard IN cord-339886-th1da1bb 70 39 the the DT cord-339886-th1da1bb 70 40 reduced reduce VBN cord-339886-th1da1bb 70 41 - - HYPH cord-339886-th1da1bb 70 42 gravity gravity NN cord-339886-th1da1bb 70 43 aircraft aircraft NN cord-339886-th1da1bb 70 44 ( ( -LRB- cord-339886-th1da1bb 70 45 nicknamed nickname VBN cord-339886-th1da1bb 70 46 the the DT cord-339886-th1da1bb 70 47 ' ' `` cord-339886-th1da1bb 70 48 Vomit Vomit NNP cord-339886-th1da1bb 70 49 Comet Comet NNP cord-339886-th1da1bb 70 50 ' ' '' cord-339886-th1da1bb 70 51 ) ) -RRB- cord-339886-th1da1bb 71 1 28 28 CD cord-339886-th1da1bb 71 2 and and CC cord-339886-th1da1bb 71 3 the the DT cord-339886-th1da1bb 71 4 International International NNP cord-339886-th1da1bb 71 5 Space Space NNP cord-339886-th1da1bb 71 6 Station Station NNP cord-339886-th1da1bb 71 7 29 29 CD cord-339886-th1da1bb 71 8 . . . cord-339886-th1da1bb 72 1 However however RB cord-339886-th1da1bb 72 2 , , , cord-339886-th1da1bb 72 3 this this DT cord-339886-th1da1bb 72 4 technology technology NN cord-339886-th1da1bb 72 5 is be VBZ cord-339886-th1da1bb 72 6 not not RB cord-339886-th1da1bb 72 7 yet yet RB cord-339886-th1da1bb 72 8 a a DT cord-339886-th1da1bb 72 9 panacea panacea NN cord-339886-th1da1bb 72 10 ; ; , cord-339886-th1da1bb 72 11 remaining remain VBG cord-339886-th1da1bb 72 12 challenges challenge NNS cord-339886-th1da1bb 72 13 include include VBP cord-339886-th1da1bb 72 14 high high JJ cord-339886-th1da1bb 72 15 DNA dna NN cord-339886-th1da1bb 72 16 or or CC cord-339886-th1da1bb 72 17 RNA RNA NNP cord-339886-th1da1bb 72 18 input input NN cord-339886-th1da1bb 72 19 requirements requirement NNS cord-339886-th1da1bb 72 20 ( ( -LRB- cord-339886-th1da1bb 72 21 currently currently RB cord-339886-th1da1bb 72 22 hundreds hundred NNS cord-339886-th1da1bb 72 23 of of IN cord-339886-th1da1bb 72 24 nanograms nanogram NNS cord-339886-th1da1bb 72 25 ) ) -RRB- cord-339886-th1da1bb 72 26 , , , cord-339886-th1da1bb 72 27 which which WDT cord-339886-th1da1bb 72 28 often often RB cord-339886-th1da1bb 72 29 necessitate necessitate VBP cord-339886-th1da1bb 72 30 PCR pcr NN cord-339886-th1da1bb 72 31 - - HYPH cord-339886-th1da1bb 72 32 based base VBN cord-339886-th1da1bb 72 33 amplification amplification NN cord-339886-th1da1bb 72 34 approaches approach VBZ cord-339886-th1da1bb 72 35 ; ; : cord-339886-th1da1bb 72 36 a a DT cord-339886-th1da1bb 72 37 flow flow NN cord-339886-th1da1bb 72 38 cell cell NN cord-339886-th1da1bb 72 39 cost cost NN cord-339886-th1da1bb 72 40 of of IN cord-339886-th1da1bb 72 41 $ $ $ cord-339886-th1da1bb 72 42 500 500 CD cord-339886-th1da1bb 72 43 , , , cord-339886-th1da1bb 72 44 keeping keep VBG cord-339886-th1da1bb 72 45 the the DT cord-339886-th1da1bb 72 46 cost cost NN cord-339886-th1da1bb 72 47 per per IN cord-339886-th1da1bb 72 48 sample sample NN cord-339886-th1da1bb 72 49 high high JJ cord-339886-th1da1bb 72 50 despite despite IN cord-339886-th1da1bb 72 51 multiplexing multiplexe VBG cord-339886-th1da1bb 72 52 approaches approach NNS cord-339886-th1da1bb 72 53 ; ; : cord-339886-th1da1bb 72 54 and and CC cord-339886-th1da1bb 72 55 high high JJ cord-339886-th1da1bb 72 56 error error NN cord-339886-th1da1bb 72 57 rates rate NNS cord-339886-th1da1bb 72 58 , , , cord-339886-th1da1bb 72 59 which which WDT cord-339886-th1da1bb 72 60 require require VBP cord-339886-th1da1bb 72 61 that that IN cord-339886-th1da1bb 72 62 genomes genome NNS cord-339886-th1da1bb 72 63 are be VBP cord-339886-th1da1bb 72 64 sequenced sequence VBN cord-339886-th1da1bb 72 65 to to IN cord-339886-th1da1bb 72 66 high high JJ cord-339886-th1da1bb 72 67 coverage coverage NN cord-339886-th1da1bb 72 68 for for IN cord-339886-th1da1bb 72 69 single single JJ cord-339886-th1da1bb 72 70 nucleotide nucleotide JJ cord-339886-th1da1bb 72 71 polymorphism polymorphism NN cord-339886-th1da1bb 72 72 - - HYPH cord-339886-th1da1bb 72 73 based base VBN cord-339886-th1da1bb 72 74 analysis analysis NN cord-339886-th1da1bb 72 75 and and CC cord-339886-th1da1bb 72 76 analysed analyse VBD cord-339886-th1da1bb 72 77 at at IN cord-339886-th1da1bb 72 78 the the DT cord-339886-th1da1bb 72 79 signal signal JJ cord-339886-th1da1bb 72 80 level level NN cord-339886-th1da1bb 72 81 . . . cord-339886-th1da1bb 73 1 Moreover moreover RB cord-339886-th1da1bb 73 2 , , , cord-339886-th1da1bb 73 3 although although IN cord-339886-th1da1bb 73 4 the the DT cord-339886-th1da1bb 73 5 long long JJ cord-339886-th1da1bb 73 6 reads read NNS cord-339886-th1da1bb 73 7 produced produce VBN cord-339886-th1da1bb 73 8 by by IN cord-339886-th1da1bb 73 9 the the DT cord-339886-th1da1bb 73 10 MinION minion NN cord-339886-th1da1bb 73 11 overcome overcome VBP cord-339886-th1da1bb 73 12 a a DT cord-339886-th1da1bb 73 13 number number NN cord-339886-th1da1bb 73 14 of of IN cord-339886-th1da1bb 73 15 challenges challenge NNS cord-339886-th1da1bb 73 16 in in IN cord-339886-th1da1bb 73 17 assembling assemble VBG cord-339886-th1da1bb 73 18 eukaryotic eukaryotic JJ cord-339886-th1da1bb 73 19 microbial microbial JJ cord-339886-th1da1bb 73 20 pathogen pathogen NN cord-339886-th1da1bb 73 21 genomes genome NNS cord-339886-th1da1bb 73 22 , , , cord-339886-th1da1bb 73 23 such such JJ cord-339886-th1da1bb 73 24 as as IN cord-339886-th1da1bb 73 25 the the DT cord-339886-th1da1bb 73 26 presence presence NN cord-339886-th1da1bb 73 27 of of IN cord-339886-th1da1bb 73 28 discrete discrete JJ cord-339886-th1da1bb 73 29 chromosomes chromosome NNS cord-339886-th1da1bb 73 30 or or CC cord-339886-th1da1bb 73 31 long long JJ cord-339886-th1da1bb 73 32 repetitive repetitive JJ cord-339886-th1da1bb 73 33 regions region NNS cord-339886-th1da1bb 73 34 , , , cord-339886-th1da1bb 73 35 the the DT cord-339886-th1da1bb 73 36 upstream upstream JJ cord-339886-th1da1bb 73 37 nucleic nucleic JJ cord-339886-th1da1bb 73 38 acid acid NN cord-339886-th1da1bb 73 39 extraction extraction NN cord-339886-th1da1bb 73 40 steps step NNS cord-339886-th1da1bb 73 41 required require VBN cord-339886-th1da1bb 73 42 to to TO cord-339886-th1da1bb 73 43 obtain obtain VB cord-339886-th1da1bb 73 44 genomic genomic JJ cord-339886-th1da1bb 73 45 DNA dna NN cord-339886-th1da1bb 73 46 vary vary VBP cord-339886-th1da1bb 73 47 across across IN cord-339886-th1da1bb 73 48 microbial microbial JJ cord-339886-th1da1bb 73 49 domains domain NNS cord-339886-th1da1bb 73 50 and and CC cord-339886-th1da1bb 73 51 might may MD cord-339886-th1da1bb 73 52 necessitate necessitate VB cord-339886-th1da1bb 73 53 reagents reagent NNS cord-339886-th1da1bb 73 54 and and CC cord-339886-th1da1bb 73 55 equipment equipment NN cord-339886-th1da1bb 73 56 far far RB cord-339886-th1da1bb 73 57 less less RBR cord-339886-th1da1bb 73 58 portable portable JJ cord-339886-th1da1bb 73 59 than than IN cord-339886-th1da1bb 73 60 the the DT cord-339886-th1da1bb 73 61 MinION minion NN cord-339886-th1da1bb 73 62 . . . cord-339886-th1da1bb 74 1 From from IN cord-339886-th1da1bb 74 2 transmission transmission NN cord-339886-th1da1bb 74 3 to to IN cord-339886-th1da1bb 74 4 epidemic epidemic NN cord-339886-th1da1bb 74 5 dynamics dynamic NNS cord-339886-th1da1bb 74 6 . . . cord-339886-th1da1bb 75 1 Genomics genomic NNS cord-339886-th1da1bb 75 2 is be VBZ cord-339886-th1da1bb 75 3 capable capable JJ cord-339886-th1da1bb 75 4 of of IN cord-339886-th1da1bb 75 5 informing inform VBG cord-339886-th1da1bb 75 6 not not RB cord-339886-th1da1bb 75 7 just just RB cord-339886-th1da1bb 75 8 pathogen pathogen NN cord-339886-th1da1bb 75 9 diagnostics diagnostic NNS cord-339886-th1da1bb 75 10 but but CC cord-339886-th1da1bb 75 11 also also RB cord-339886-th1da1bb 75 12 epidemiology epidemiology NN cord-339886-th1da1bb 75 13 . . . cord-339886-th1da1bb 76 1 Pathogen pathogen NN cord-339886-th1da1bb 76 2 sequencing sequencing NN cord-339886-th1da1bb 76 3 has have VBZ cord-339886-th1da1bb 76 4 been be VBN cord-339886-th1da1bb 76 5 used use VBN cord-339886-th1da1bb 76 6 for for IN cord-339886-th1da1bb 76 7 decades decade NNS cord-339886-th1da1bb 76 8 to to TO cord-339886-th1da1bb 76 9 understand understand VB cord-339886-th1da1bb 76 10 transmission transmission NN cord-339886-th1da1bb 76 11 in in IN cord-339886-th1da1bb 76 12 viral viral JJ cord-339886-th1da1bb 76 13 outbreaks outbreak NNS cord-339886-th1da1bb 76 14 , , , cord-339886-th1da1bb 76 15 from from IN cord-339886-th1da1bb 76 16 early early JJ cord-339886-th1da1bb 76 17 studies study NNS cord-339886-th1da1bb 76 18 of of IN cord-339886-th1da1bb 76 19 hantavirus hantavirus NN cord-339886-th1da1bb 76 20 in in IN cord-339886-th1da1bb 76 21 the the DT cord-339886-th1da1bb 76 22 United United NNP cord-339886-th1da1bb 76 23 States States NNP cord-339886-th1da1bb 76 24 of of IN cord-339886-th1da1bb 76 25 America America NNP cord-339886-th1da1bb 76 26 30 30 CD cord-339886-th1da1bb 76 27 to to IN cord-339886-th1da1bb 76 28 human human JJ cord-339886-th1da1bb 76 29 immunodeficiency immunodeficiency NN cord-339886-th1da1bb 76 30 virus virus NN cord-339886-th1da1bb 76 31 ( ( -LRB- cord-339886-th1da1bb 76 32 HIV HIV NNP cord-339886-th1da1bb 76 33 ) ) -RRB- cord-339886-th1da1bb 76 34 in in IN cord-339886-th1da1bb 76 35 the the DT cord-339886-th1da1bb 76 36 United United NNP cord-339886-th1da1bb 76 37 Kingdom Kingdom NNP cord-339886-th1da1bb 76 38 31 31 CD cord-339886-th1da1bb 76 39 ; ; : cord-339886-th1da1bb 76 40 more more RBR cord-339886-th1da1bb 76 41 recently recently RB cord-339886-th1da1bb 76 42 , , , cord-339886-th1da1bb 76 43 the the DT cord-339886-th1da1bb 76 44 approach approach NN cord-339886-th1da1bb 76 45 has have VBZ cord-339886-th1da1bb 76 46 been be VBN cord-339886-th1da1bb 76 47 successfully successfully RB cord-339886-th1da1bb 76 48 extended extend VBN cord-339886-th1da1bb 76 49 to to TO cord-339886-th1da1bb 76 50 include include VB cord-339886-th1da1bb 76 51 bacterial bacterial JJ cord-339886-th1da1bb 76 52 pathogens pathogen NNS cord-339886-th1da1bb 76 53 ( ( -LRB- cord-339886-th1da1bb 76 54 reviewed review VBN cord-339886-th1da1bb 76 55 in in IN cord-339886-th1da1bb 76 56 REF REF NNP cord-339886-th1da1bb 76 57 . . . cord-339886-th1da1bb 76 58 32 32 CD cord-339886-th1da1bb 76 59 ) ) -RRB- cord-339886-th1da1bb 76 60 and and CC cord-339886-th1da1bb 76 61 has have VBZ cord-339886-th1da1bb 76 62 come come VBN cord-339886-th1da1bb 76 63 to to TO cord-339886-th1da1bb 76 64 be be VB cord-339886-th1da1bb 76 65 known know VBN cord-339886-th1da1bb 76 66 as as IN cord-339886-th1da1bb 76 67 genomic genomic JJ cord-339886-th1da1bb 76 68 epidemiology epidemiology NN cord-339886-th1da1bb 76 69 , , , cord-339886-th1da1bb 76 70 a a DT cord-339886-th1da1bb 76 71 term term NN cord-339886-th1da1bb 76 72 encompassing encompass VBG cord-339886-th1da1bb 76 73 everything everything NN cord-339886-th1da1bb 76 74 from from IN cord-339886-th1da1bb 76 75 population population NN cord-339886-th1da1bb 76 76 dynamics dynamic NNS cord-339886-th1da1bb 76 77 to to IN cord-339886-th1da1bb 76 78 the the DT cord-339886-th1da1bb 76 79 reconstruction reconstruction NN cord-339886-th1da1bb 76 80 of of IN cord-339886-th1da1bb 76 81 individual individual JJ cord-339886-th1da1bb 76 82 transmission transmission NN cord-339886-th1da1bb 76 83 events event NNS cord-339886-th1da1bb 76 84 within within IN cord-339886-th1da1bb 76 85 outbreaks outbreak NNS cord-339886-th1da1bb 76 86 32 32 CD cord-339886-th1da1bb 76 87 . . . cord-339886-th1da1bb 77 1 Most Most JJS cord-339886-th1da1bb 77 2 transmission transmission NN cord-339886-th1da1bb 77 3 - - HYPH cord-339886-th1da1bb 77 4 focused focus VBN cord-339886-th1da1bb 77 5 investigations investigation NNS cord-339886-th1da1bb 77 6 to to IN cord-339886-th1da1bb 77 7 date date NN cord-339886-th1da1bb 77 8 have have VBP cord-339886-th1da1bb 77 9 been be VBN cord-339886-th1da1bb 77 10 retrospective retrospective JJ cord-339886-th1da1bb 77 11 , , , cord-339886-th1da1bb 77 12 with with IN cord-339886-th1da1bb 77 13 only only RB cord-339886-th1da1bb 77 14 a a DT cord-339886-th1da1bb 77 15 subset subset JJ cord-339886-th1da1bb 77 16 unfolding unfolding NN cord-339886-th1da1bb 77 17 in in IN cord-339886-th1da1bb 77 18 real real JJ cord-339886-th1da1bb 77 19 time time NN cord-339886-th1da1bb 77 20 , , , cord-339886-th1da1bb 77 21 as as IN cord-339886-th1da1bb 77 22 cases case NNS cord-339886-th1da1bb 77 23 are be VBP cord-339886-th1da1bb 77 24 diagnosed diagnose VBN cord-339886-th1da1bb 77 25 [ [ -LRB- cord-339886-th1da1bb 77 26 33 33 CD cord-339886-th1da1bb 77 27 ] ] -RRB- cord-339886-th1da1bb 78 1 [ [ -LRB- cord-339886-th1da1bb 78 2 34 34 CD cord-339886-th1da1bb 78 3 ] ] -RRB- cord-339886-th1da1bb 78 4 [ [ -LRB- cord-339886-th1da1bb 78 5 35 35 CD cord-339886-th1da1bb 78 6 ] ] -RRB- cord-339886-th1da1bb 78 7 [ [ -LRB- cord-339886-th1da1bb 78 8 36 36 CD cord-339886-th1da1bb 78 9 ] ] -RRB- cord-339886-th1da1bb 78 10 [ [ -LRB- cord-339886-th1da1bb 78 11 37 37 CD cord-339886-th1da1bb 78 12 ] ] -RRB- cord-339886-th1da1bb 78 13 . . . cord-339886-th1da1bb 79 1 In in IN cord-339886-th1da1bb 79 2 transmission transmission NN cord-339886-th1da1bb 79 3 - - HYPH cord-339886-th1da1bb 79 4 focused focus VBN cord-339886-th1da1bb 79 5 investigations investigation NNS cord-339886-th1da1bb 79 6 , , , cord-339886-th1da1bb 79 7 genetic genetic JJ cord-339886-th1da1bb 79 8 variants variant NNS cord-339886-th1da1bb 79 9 are be VBP cord-339886-th1da1bb 79 10 used use VBN cord-339886-th1da1bb 79 11 to to TO cord-339886-th1da1bb 79 12 identify identify VB cord-339886-th1da1bb 79 13 person person NN cord-339886-th1da1bb 79 14 - - HYPH cord-339886-th1da1bb 79 15 to to IN cord-339886-th1da1bb 79 16 - - HYPH cord-339886-th1da1bb 79 17 person person NN cord-339886-th1da1bb 79 18 transmission transmission NN cord-339886-th1da1bb 79 19 Figure figure NN cord-339886-th1da1bb 79 20 2 2 CD cord-339886-th1da1bb 79 21 | | NFP cord-339886-th1da1bb 79 22 Challenges challenge NNS cord-339886-th1da1bb 79 23 to to IN cord-339886-th1da1bb 79 24 in in IN cord-339886-th1da1bb 79 25 - - HYPH cord-339886-th1da1bb 79 26 field field NN cord-339886-th1da1bb 79 27 clinical clinical JJ cord-339886-th1da1bb 79 28 metagenomics metagenomic NNS cord-339886-th1da1bb 79 29 for for IN cord-339886-th1da1bb 79 30 rapid rapid JJ cord-339886-th1da1bb 79 31 diagnosis diagnosis NN cord-339886-th1da1bb 79 32 and and CC cord-339886-th1da1bb 79 33 outbreak outbreak NN cord-339886-th1da1bb 79 34 response response NN cord-339886-th1da1bb 79 35 . . . cord-339886-th1da1bb 80 1 A a DT cord-339886-th1da1bb 80 2 mobile mobile JJ cord-339886-th1da1bb 80 3 medical medical JJ cord-339886-th1da1bb 80 4 unit unit NN cord-339886-th1da1bb 80 5 deploying deploy VBG cord-339886-th1da1bb 80 6 a a DT cord-339886-th1da1bb 80 7 portable portable JJ cord-339886-th1da1bb 80 8 clinical clinical JJ cord-339886-th1da1bb 80 9 metagenomics metagenomic NNS cord-339886-th1da1bb 80 10 platform platform NN cord-339886-th1da1bb 80 11 has have VBZ cord-339886-th1da1bb 80 12 been be VBN cord-339886-th1da1bb 80 13 established establish VBN cord-339886-th1da1bb 80 14 at at IN cord-339886-th1da1bb 80 15 the the DT cord-339886-th1da1bb 80 16 epicentre epicentre NN cord-339886-th1da1bb 80 17 of of IN cord-339886-th1da1bb 80 18 an an DT cord-339886-th1da1bb 80 19 infectious infectious JJ cord-339886-th1da1bb 80 20 disease disease NN cord-339886-th1da1bb 80 21 outbreak outbreak NN cord-339886-th1da1bb 80 22 , , , cord-339886-th1da1bb 80 23 but but CC cord-339886-th1da1bb 80 24 the the DT cord-339886-th1da1bb 80 25 team team NN cord-339886-th1da1bb 80 26 faces face VBZ cord-339886-th1da1bb 80 27 challenges challenge NNS cord-339886-th1da1bb 80 28 throughout throughout IN cord-339886-th1da1bb 80 29 the the DT cord-339886-th1da1bb 80 30 diagnostic diagnostic JJ cord-339886-th1da1bb 80 31 process process NN cord-339886-th1da1bb 80 32 and and CC cord-339886-th1da1bb 80 33 epidemiological epidemiological JJ cord-339886-th1da1bb 80 34 response response NN cord-339886-th1da1bb 80 35 . . . cord-339886-th1da1bb 81 1 For for IN cord-339886-th1da1bb 81 2 example example NN cord-339886-th1da1bb 81 3 , , , cord-339886-th1da1bb 81 4 in in IN cord-339886-th1da1bb 81 5 the the DT cord-339886-th1da1bb 81 6 case case NN cord-339886-th1da1bb 81 7 of of IN cord-339886-th1da1bb 81 8 Zika Zika NNP cord-339886-th1da1bb 81 9 virus virus NN cord-339886-th1da1bb 81 10 , , , cord-339886-th1da1bb 81 11 samples sample NNS cord-339886-th1da1bb 81 12 , , , cord-339886-th1da1bb 81 13 such such JJ cord-339886-th1da1bb 81 14 as as IN cord-339886-th1da1bb 81 15 blood blood NN cord-339886-th1da1bb 81 16 , , , cord-339886-th1da1bb 81 17 with with IN cord-339886-th1da1bb 81 18 low low JJ cord-339886-th1da1bb 81 19 viral viral JJ cord-339886-th1da1bb 81 20 titres titre NNS cord-339886-th1da1bb 81 21 , , , cord-339886-th1da1bb 81 22 a a DT cord-339886-th1da1bb 81 23 small small JJ cord-339886-th1da1bb 81 24 genome genome NN cord-339886-th1da1bb 81 25 of of IN cord-339886-th1da1bb 81 26 < < NNP cord-339886-th1da1bb 81 27 11 11 CD cord-339886-th1da1bb 81 28 kb kb NNP cord-339886-th1da1bb 81 29 and and CC cord-339886-th1da1bb 81 30 transient transient JJ cord-339886-th1da1bb 81 31 viraemia viraemia NN cord-339886-th1da1bb 81 32 120 120 CD cord-339886-th1da1bb 81 33 combine combine VBP cord-339886-th1da1bb 81 34 to to TO cord-339886-th1da1bb 81 35 complicate complicate VB cord-339886-th1da1bb 81 36 detection detection NN cord-339886-th1da1bb 81 37 of of IN cord-339886-th1da1bb 81 38 viral viral JJ cord-339886-th1da1bb 81 39 nucleic nucleic JJ cord-339886-th1da1bb 81 40 acid acid NN cord-339886-th1da1bb 81 41 by by IN cord-339886-th1da1bb 81 42 use use NN cord-339886-th1da1bb 81 43 of of IN cord-339886-th1da1bb 81 44 a a DT cord-339886-th1da1bb 81 45 strictly strictly RB cord-339886-th1da1bb 81 46 metagenomic metagenomic JJ cord-339886-th1da1bb 81 47 approach approach NN cord-339886-th1da1bb 81 48 . . . cord-339886-th1da1bb 82 1 Furthermore furthermore RB cord-339886-th1da1bb 82 2 , , , cord-339886-th1da1bb 82 3 obtaining obtain VBG cord-339886-th1da1bb 82 4 a a DT cord-339886-th1da1bb 82 5 sufficient sufficient JJ cord-339886-th1da1bb 82 6 amount amount NN cord-339886-th1da1bb 82 7 of of IN cord-339886-th1da1bb 82 8 viral viral JJ cord-339886-th1da1bb 82 9 nucleic nucleic JJ cord-339886-th1da1bb 82 10 acids acid NNS cord-339886-th1da1bb 82 11 for for IN cord-339886-th1da1bb 82 12 genome genome NN cord-339886-th1da1bb 82 13 sequencing sequencing NN cord-339886-th1da1bb 82 14 beyond beyond IN cord-339886-th1da1bb 82 15 simple simple JJ cord-339886-th1da1bb 82 16 diagnostics diagnostic NNS cord-339886-th1da1bb 82 17 requires require VBZ cord-339886-th1da1bb 82 18 a a DT cord-339886-th1da1bb 82 19 tiling tiling NN cord-339886-th1da1bb 82 20 PCR pcr NN cord-339886-th1da1bb 82 21 and and CC cord-339886-th1da1bb 82 22 amplicon amplicon NN cord-339886-th1da1bb 82 23 sequencing sequencing NN cord-339886-th1da1bb 82 24 approach approach NN cord-339886-th1da1bb 82 25 14 14 CD cord-339886-th1da1bb 82 26 . . . cord-339886-th1da1bb 83 1 Other other JJ cord-339886-th1da1bb 83 2 challenges challenge NNS cord-339886-th1da1bb 83 3 include include VBP cord-339886-th1da1bb 83 4 , , , cord-339886-th1da1bb 83 5 for for IN cord-339886-th1da1bb 83 6 example example NN cord-339886-th1da1bb 83 7 , , , cord-339886-th1da1bb 83 8 access access NN cord-339886-th1da1bb 83 9 to to IN cord-339886-th1da1bb 83 10 a a DT cord-339886-th1da1bb 83 11 reliable reliable JJ cord-339886-th1da1bb 83 12 Internet internet NN cord-339886-th1da1bb 83 13 connection connection NN cord-339886-th1da1bb 83 14 , , , cord-339886-th1da1bb 83 15 the the DT cord-339886-th1da1bb 83 16 ability ability NN cord-339886-th1da1bb 83 17 to to TO cord-339886-th1da1bb 83 18 collect collect VB cord-339886-th1da1bb 83 19 sample sample NN cord-339886-th1da1bb 83 20 metadata metadata NN cord-339886-th1da1bb 83 21 and and CC cord-339886-th1da1bb 83 22 translating translate VBG cord-339886-th1da1bb 83 23 genomic genomic JJ cord-339886-th1da1bb 83 24 findings finding NNS cord-339886-th1da1bb 83 25 into into IN cord-339886-th1da1bb 83 26 real real JJ cord-339886-th1da1bb 83 27 - - HYPH cord-339886-th1da1bb 83 28 time time NN cord-339886-th1da1bb 83 29 , , , cord-339886-th1da1bb 83 30 actionable actionable JJ cord-339886-th1da1bb 83 31 recommendations recommendation NNS cord-339886-th1da1bb 83 32 . . . cord-339886-th1da1bb 84 1 The the DT cord-339886-th1da1bb 84 2 average average JJ cord-339886-th1da1bb 84 3 number number NN cord-339886-th1da1bb 84 4 of of IN cord-339886-th1da1bb 84 5 secondary secondary JJ cord-339886-th1da1bb 84 6 cases case NNS cord-339886-th1da1bb 84 7 of of IN cord-339886-th1da1bb 84 8 an an DT cord-339886-th1da1bb 84 9 infectious infectious JJ cord-339886-th1da1bb 84 10 disease disease NN cord-339886-th1da1bb 84 11 produced produce VBN cord-339886-th1da1bb 84 12 by by IN cord-339886-th1da1bb 84 13 a a DT cord-339886-th1da1bb 84 14 single single JJ cord-339886-th1da1bb 84 15 infectious infectious JJ cord-339886-th1da1bb 84 16 case case NN cord-339886-th1da1bb 84 17 , , , cord-339886-th1da1bb 84 18 given give VBN cord-339886-th1da1bb 84 19 a a DT cord-339886-th1da1bb 84 20 completely completely RB cord-339886-th1da1bb 84 21 susceptible susceptible JJ cord-339886-th1da1bb 84 22 population population NN cord-339886-th1da1bb 84 23 . . . cord-339886-th1da1bb 85 1 A a DT cord-339886-th1da1bb 85 2 term term NN cord-339886-th1da1bb 85 3 describing describe VBG cord-339886-th1da1bb 85 4 infectious infectious JJ cord-339886-th1da1bb 85 5 diseases disease NNS cord-339886-th1da1bb 85 6 that that WDT cord-339886-th1da1bb 85 7 typically typically RB cord-339886-th1da1bb 85 8 exist exist VBP cord-339886-th1da1bb 85 9 in in IN cord-339886-th1da1bb 85 10 an an DT cord-339886-th1da1bb 85 11 animal animal NN cord-339886-th1da1bb 85 12 reservoir reservoir NN cord-339886-th1da1bb 86 1 but but CC cord-339886-th1da1bb 86 2 that that DT cord-339886-th1da1bb 86 3 can can MD cord-339886-th1da1bb 86 4 be be VB cord-339886-th1da1bb 86 5 transmitted transmit VBN cord-339886-th1da1bb 86 6 to to IN cord-339886-th1da1bb 86 7 humans human NNS cord-339886-th1da1bb 86 8 . . . cord-339886-th1da1bb 87 1 The the DT cord-339886-th1da1bb 87 2 transmission transmission NN cord-339886-th1da1bb 87 3 of of IN cord-339886-th1da1bb 87 4 an an DT cord-339886-th1da1bb 87 5 infectious infectious JJ cord-339886-th1da1bb 87 6 disease disease NN cord-339886-th1da1bb 87 7 , , , cord-339886-th1da1bb 87 8 such such JJ cord-339886-th1da1bb 87 9 as as IN cord-339886-th1da1bb 87 10 Ebola Ebola NNP cord-339886-th1da1bb 87 11 , , , cord-339886-th1da1bb 87 12 from from IN cord-339886-th1da1bb 87 13 a a DT cord-339886-th1da1bb 87 14 survivor survivor NN cord-339886-th1da1bb 87 15 of of IN cord-339886-th1da1bb 87 16 that that DT cord-339886-th1da1bb 87 17 disease disease NN cord-339886-th1da1bb 87 18 who who WP cord-339886-th1da1bb 87 19 has have VBZ cord-339886-th1da1bb 87 20 recovered recover VBN cord-339886-th1da1bb 87 21 from from IN cord-339886-th1da1bb 87 22 their -PRON- PRP$ cord-339886-th1da1bb 87 23 symptoms symptom NNS cord-339886-th1da1bb 87 24 . . . cord-339886-th1da1bb 88 1 A a DT cord-339886-th1da1bb 88 2 term term NN cord-339886-th1da1bb 88 3 describing describe VBG cord-339886-th1da1bb 88 4 infectious infectious JJ cord-339886-th1da1bb 88 5 diseases disease NNS cord-339886-th1da1bb 88 6 that that WDT cord-339886-th1da1bb 88 7 are be VBP cord-339886-th1da1bb 88 8 transmitted transmit VBN cord-339886-th1da1bb 88 9 to to IN cord-339886-th1da1bb 88 10 humans human NNS cord-339886-th1da1bb 88 11 through through IN cord-339886-th1da1bb 88 12 contact contact NN cord-339886-th1da1bb 88 13 with with IN cord-339886-th1da1bb 88 14 a a DT cord-339886-th1da1bb 88 15 non non JJ cord-339886-th1da1bb 88 16 - - JJ cord-339886-th1da1bb 88 17 human human JJ cord-339886-th1da1bb 88 18 species specie NNS cord-339886-th1da1bb 88 19 , , , cord-339886-th1da1bb 88 20 particularly particularly RB cord-339886-th1da1bb 88 21 those those DT cord-339886-th1da1bb 88 22 diseases disease NNS cord-339886-th1da1bb 88 23 spread spread VBP cord-339886-th1da1bb 88 24 through through IN cord-339886-th1da1bb 88 25 insect insect NN cord-339886-th1da1bb 88 26 bites bite NNS cord-339886-th1da1bb 88 27 . . . cord-339886-th1da1bb 89 1 An an DT cord-339886-th1da1bb 89 2 example example NN cord-339886-th1da1bb 89 3 is be VBZ cord-339886-th1da1bb 89 4 the the DT cord-339886-th1da1bb 89 5 Zika Zika NNP cord-339886-th1da1bb 89 6 virus virus NN cord-339886-th1da1bb 89 7 , , , cord-339886-th1da1bb 89 8 which which WDT cord-339886-th1da1bb 89 9 is be VBZ cord-339886-th1da1bb 89 10 carried carry VBN cord-339886-th1da1bb 89 11 by by IN cord-339886-th1da1bb 89 12 mosquitos mosquito NNS cord-339886-th1da1bb 89 13 . . . cord-339886-th1da1bb 90 1 Geographical geographical JJ cord-339886-th1da1bb 90 2 settings setting NNS cord-339886-th1da1bb 90 3 where where WRB cord-339886-th1da1bb 90 4 a a DT cord-339886-th1da1bb 90 5 variety variety NN cord-339886-th1da1bb 90 6 of of IN cord-339886-th1da1bb 90 7 factors factor NNS cord-339886-th1da1bb 90 8 converge converge VBP cord-339886-th1da1bb 90 9 to to TO cord-339886-th1da1bb 90 10 create create VB cord-339886-th1da1bb 90 11 the the DT cord-339886-th1da1bb 90 12 social social JJ cord-339886-th1da1bb 90 13 and and CC cord-339886-th1da1bb 90 14 environmental environmental JJ cord-339886-th1da1bb 90 15 conditions condition NNS cord-339886-th1da1bb 90 16 that that WDT cord-339886-th1da1bb 90 17 promote promote VBP cord-339886-th1da1bb 90 18 disease disease NN cord-339886-th1da1bb 90 19 transmission transmission NN cord-339886-th1da1bb 90 20 . . . cord-339886-th1da1bb 91 1 The the DT cord-339886-th1da1bb 91 2 process process NN cord-339886-th1da1bb 91 3 by by IN cord-339886-th1da1bb 91 4 which which WDT cord-339886-th1da1bb 91 5 an an DT cord-339886-th1da1bb 91 6 infectious infectious JJ cord-339886-th1da1bb 91 7 disease disease NN cord-339886-th1da1bb 91 8 changes change NNS cord-339886-th1da1bb 91 9 from from IN cord-339886-th1da1bb 91 10 existing exist VBG cord-339886-th1da1bb 91 11 exclusively exclusively RB cord-339886-th1da1bb 91 12 in in IN cord-339886-th1da1bb 91 13 animals animal NNS cord-339886-th1da1bb 91 14 to to IN cord-339886-th1da1bb 91 15 being be VBG cord-339886-th1da1bb 91 16 able able JJ cord-339886-th1da1bb 91 17 to to TO cord-339886-th1da1bb 91 18 infect infect VB cord-339886-th1da1bb 91 19 , , , cord-339886-th1da1bb 91 20 then then RB cord-339886-th1da1bb 91 21 transmit transmit VB cord-339886-th1da1bb 91 22 between between IN cord-339886-th1da1bb 91 23 , , , cord-339886-th1da1bb 91 24 humans human NNS cord-339886-th1da1bb 91 25 . . . cord-339886-th1da1bb 92 1 See see VB cord-339886-th1da1bb 92 2 FIG fig NN cord-339886-th1da1bb 92 3 . . . cord-339886-th1da1bb 93 1 4 4 LS cord-339886-th1da1bb 93 2 . . . cord-339886-th1da1bb 93 3 events event NNS cord-339886-th1da1bb 93 4 ( ( -LRB- cord-339886-th1da1bb 93 5 FIG fig NN cord-339886-th1da1bb 93 6 . . . cord-339886-th1da1bb 93 7 3 3 CD cord-339886-th1da1bb 93 8 ) ) -RRB- cord-339886-th1da1bb 93 9 , , , cord-339886-th1da1bb 93 10 either either CC cord-339886-th1da1bb 93 11 through through IN cord-339886-th1da1bb 93 12 manual manual JJ cord-339886-th1da1bb 93 13 interpretation interpretation NN cord-339886-th1da1bb 93 14 of of IN cord-339886-th1da1bb 93 15 the the DT cord-339886-th1da1bb 93 16 variants variant NNS cord-339886-th1da1bb 93 17 shared share VBN cord-339886-th1da1bb 93 18 between between IN cord-339886-th1da1bb 93 19 outbreak outbreak NN cord-339886-th1da1bb 93 20 cases case NNS cord-339886-th1da1bb 93 21 38 38 CD cord-339886-th1da1bb 93 22 or or CC cord-339886-th1da1bb 93 23 via via IN cord-339886-th1da1bb 93 24 modelbased modelbased JJ cord-339886-th1da1bb 93 25 approaches approach NNS cord-339886-th1da1bb 93 26 39 39 CD cord-339886-th1da1bb 93 27 , , , cord-339886-th1da1bb 93 28 with with IN cord-339886-th1da1bb 93 29 the the DT cord-339886-th1da1bb 93 30 result result NN cord-339886-th1da1bb 93 31 being be VBG cord-339886-th1da1bb 93 32 a a DT cord-339886-th1da1bb 93 33 transmission transmission NN cord-339886-th1da1bb 93 34 network network NN cord-339886-th1da1bb 93 35 . . . cord-339886-th1da1bb 94 1 Epidemic epidemic NN cord-339886-th1da1bb 94 2 investigations investigation NNS cord-339886-th1da1bb 94 3 are be VBP cord-339886-th1da1bb 94 4 very very RB cord-339886-th1da1bb 94 5 different different JJ cord-339886-th1da1bb 94 6 -only -only . cord-339886-th1da1bb 95 1 a a DT cord-339886-th1da1bb 95 2 subset subset NN cord-339886-th1da1bb 95 3 of of IN cord-339886-th1da1bb 95 4 the the DT cord-339886-th1da1bb 95 5 epidemic epidemic NN cord-339886-th1da1bb 95 6 cases case NNS cord-339886-th1da1bb 95 7 are be VBP cord-339886-th1da1bb 95 8 sequenced sequence VBN cord-339886-th1da1bb 95 9 . . . cord-339886-th1da1bb 96 1 Thus thus RB cord-339886-th1da1bb 96 2 , , , cord-339886-th1da1bb 96 3 the the DT cord-339886-th1da1bb 96 4 goal goal NN cord-339886-th1da1bb 96 5 is be VBZ cord-339886-th1da1bb 96 6 to to TO cord-339886-th1da1bb 96 7 use use VB cord-339886-th1da1bb 96 8 the the DT cord-339886-th1da1bb 96 9 population population NN cord-339886-th1da1bb 96 10 structure structure NN cord-339886-th1da1bb 96 11 of of IN cord-339886-th1da1bb 96 12 the the DT cord-339886-th1da1bb 96 13 pathogen pathogen NN cord-339886-th1da1bb 96 14 to to TO cord-339886-th1da1bb 96 15 understand understand VB cord-339886-th1da1bb 96 16 the the DT cord-339886-th1da1bb 96 17 overall overall JJ cord-339886-th1da1bb 96 18 dynamics dynamic NNS cord-339886-th1da1bb 96 19 of of IN cord-339886-th1da1bb 96 20 the the DT cord-339886-th1da1bb 96 21 epidemic epidemic NN cord-339886-th1da1bb 96 22 . . . cord-339886-th1da1bb 97 1 Here here RB cord-339886-th1da1bb 97 2 , , , cord-339886-th1da1bb 97 3 phylodynamic phylodynamic JJ cord-339886-th1da1bb 97 4 approaches approach NNS cord-339886-th1da1bb 97 5 are be VBP cord-339886-th1da1bb 97 6 used use VBN cord-339886-th1da1bb 97 7 to to TO cord-339886-th1da1bb 97 8 infer infer VB cord-339886-th1da1bb 97 9 epidemiological epidemiological JJ cord-339886-th1da1bb 97 10 parameters parameter NNS cord-339886-th1da1bb 97 11 of of IN cord-339886-th1da1bb 97 12 interest interest NN cord-339886-th1da1bb 97 13 . . . cord-339886-th1da1bb 98 1 First first RB cord-339886-th1da1bb 98 2 conceptualized conceptualize VBN cord-339886-th1da1bb 98 3 in in IN cord-339886-th1da1bb 98 4 2004 2004 CD cord-339886-th1da1bb 98 5 by by IN cord-339886-th1da1bb 98 6 Grenfell Grenfell NNP cord-339886-th1da1bb 98 7 et et FW cord-339886-th1da1bb 98 8 al al NNP cord-339886-th1da1bb 98 9 . . . cord-339886-th1da1bb 99 1 as as IN cord-339886-th1da1bb 99 2 a a DT cord-339886-th1da1bb 99 3 union union NN cord-339886-th1da1bb 99 4 of of IN cord-339886-th1da1bb 99 5 " " `` cord-339886-th1da1bb 99 6 immunodynamics immunodynamic NNS cord-339886-th1da1bb 99 7 , , , cord-339886-th1da1bb 99 8 epidemiology epidemiology NN cord-339886-th1da1bb 99 9 , , , cord-339886-th1da1bb 99 10 and and CC cord-339886-th1da1bb 99 11 evolutionary evolutionary JJ cord-339886-th1da1bb 99 12 biology biology NN cord-339886-th1da1bb 99 13 " " '' cord-339886-th1da1bb 99 14 ( ( -LRB- cord-339886-th1da1bb 99 15 REF ref NN cord-339886-th1da1bb 99 16 . . . cord-339886-th1da1bb 99 17 40 40 CD cord-339886-th1da1bb 99 18 ) ) -RRB- cord-339886-th1da1bb 99 19 , , , cord-339886-th1da1bb 99 20 phylodynamics phylodynamic NNS cord-339886-th1da1bb 99 21 captures capture VBZ cord-339886-th1da1bb 99 22 both both DT cord-339886-th1da1bb 99 23 epidemiological epidemiological JJ cord-339886-th1da1bb 99 24 and and CC cord-339886-th1da1bb 99 25 evolutionary evolutionary JJ cord-339886-th1da1bb 99 26 information information NN cord-339886-th1da1bb 99 27 from from IN cord-339886-th1da1bb 99 28 measurably measurably RB cord-339886-th1da1bb 99 29 evolving evolve VBG cord-339886-th1da1bb 99 30 pathogens pathogen NNS cord-339886-th1da1bb 100 1 -those -those . cord-339886-th1da1bb 101 1 viruses virus NNS cord-339886-th1da1bb 101 2 and and CC cord-339886-th1da1bb 101 3 bacteria bacteria NNS cord-339886-th1da1bb 101 4 for for IN cord-339886-th1da1bb 101 5 which which WDT cord-339886-th1da1bb 101 6 high high JJ cord-339886-th1da1bb 101 7 mutation mutation NN cord-339886-th1da1bb 101 8 rates rate NNS cord-339886-th1da1bb 101 9 and/or and/or CC cord-339886-th1da1bb 101 10 a a DT cord-339886-th1da1bb 101 11 range range NN cord-339886-th1da1bb 101 12 of of IN cord-339886-th1da1bb 101 13 sampling sampling NN cord-339886-th1da1bb 101 14 dates date NNS cord-339886-th1da1bb 101 15 contribute contribute VBP cord-339886-th1da1bb 101 16 to to IN cord-339886-th1da1bb 101 17 a a DT cord-339886-th1da1bb 101 18 meaningful meaningful JJ cord-339886-th1da1bb 101 19 amount amount NN cord-339886-th1da1bb 101 20 of of IN cord-339886-th1da1bb 101 21 genetic genetic JJ cord-339886-th1da1bb 101 22 variation variation NN cord-339886-th1da1bb 101 23 between between IN cord-339886-th1da1bb 101 24 sequences sequence NNS cord-339886-th1da1bb 101 25 41,42 41,42 CD cord-339886-th1da1bb 101 26 -in -in : cord-339886-th1da1bb 101 27 other other JJ cord-339886-th1da1bb 101 28 words word NNS cord-339886-th1da1bb 101 29 , , , cord-339886-th1da1bb 101 30 enough enough JJ cord-339886-th1da1bb 101 31 genetic genetic JJ cord-339886-th1da1bb 101 32 diversity diversity NN cord-339886-th1da1bb 101 33 to to TO cord-339886-th1da1bb 101 34 be be VB cord-339886-th1da1bb 101 35 able able JJ cord-339886-th1da1bb 101 36 to to TO cord-339886-th1da1bb 101 37 infer infer VB cord-339886-th1da1bb 101 38 an an DT cord-339886-th1da1bb 101 39 evolutionary evolutionary JJ cord-339886-th1da1bb 101 40 history history NN cord-339886-th1da1bb 101 41 for for IN cord-339886-th1da1bb 101 42 a a DT cord-339886-th1da1bb 101 43 pathogen pathogen NN cord-339886-th1da1bb 101 44 of of IN cord-339886-th1da1bb 101 45 interest interest NN cord-339886-th1da1bb 101 46 , , , cord-339886-th1da1bb 101 47 even even RB cord-339886-th1da1bb 101 48 if if IN cord-339886-th1da1bb 101 49 that that DT cord-339886-th1da1bb 101 50 history history NN cord-339886-th1da1bb 101 51 is be VBZ cord-339886-th1da1bb 101 52 only only RB cord-339886-th1da1bb 101 53 over over IN cord-339886-th1da1bb 101 54 the the DT cord-339886-th1da1bb 101 55 short short JJ cord-339886-th1da1bb 101 56 time time NN cord-339886-th1da1bb 101 57 frame frame NN cord-339886-th1da1bb 101 58 of of IN cord-339886-th1da1bb 101 59 an an DT cord-339886-th1da1bb 101 60 outbreak outbreak NN cord-339886-th1da1bb 101 61 or or CC cord-339886-th1da1bb 101 62 epidemic epidemic NN cord-339886-th1da1bb 101 63 . . . cord-339886-th1da1bb 102 1 This this DT cord-339886-th1da1bb 102 2 is be VBZ cord-339886-th1da1bb 102 3 possible possible JJ cord-339886-th1da1bb 102 4 for for IN cord-339886-th1da1bb 102 5 most most JJS cord-339886-th1da1bb 102 6 pathogens pathogen NNS cord-339886-th1da1bb 102 7 , , , cord-339886-th1da1bb 102 8 particularly particularly RB cord-339886-th1da1bb 102 9 single single RB cord-339886-th1da1bb 102 10 - - HYPH cord-339886-th1da1bb 102 11 stranded strand VBN cord-339886-th1da1bb 102 12 DNA dna NN cord-339886-th1da1bb 102 13 viruses virus NNS cord-339886-th1da1bb 102 14 , , , cord-339886-th1da1bb 102 15 RNA RNA NNP cord-339886-th1da1bb 102 16 viruses virus NNS cord-339886-th1da1bb 102 17 and and CC cord-339886-th1da1bb 102 18 many many JJ cord-339886-th1da1bb 102 19 bacterial bacterial JJ cord-339886-th1da1bb 102 20 species specie NNS cord-339886-th1da1bb 102 21 42 42 CD cord-339886-th1da1bb 102 22 , , , cord-339886-th1da1bb 102 23 43 43 CD cord-339886-th1da1bb 102 24 , , , cord-339886-th1da1bb 102 25 but but CC cord-339886-th1da1bb 102 26 there there EX cord-339886-th1da1bb 102 27 are be VBP cord-339886-th1da1bb 102 28 certain certain JJ cord-339886-th1da1bb 102 29 species specie NNS cord-339886-th1da1bb 102 30 for for IN cord-339886-th1da1bb 102 31 which which WDT cord-339886-th1da1bb 102 32 the the DT cord-339886-th1da1bb 102 33 lack lack NN cord-339886-th1da1bb 102 34 of of IN cord-339886-th1da1bb 102 35 a a DT cord-339886-th1da1bb 102 36 strict strict JJ cord-339886-th1da1bb 102 37 molecular molecular JJ cord-339886-th1da1bb 102 38 clock clock NN cord-339886-th1da1bb 102 39 and/or and/or CC cord-339886-th1da1bb 102 40 frequent frequent JJ cord-339886-th1da1bb 102 41 recombination recombination NN cord-339886-th1da1bb 102 42 complicate complicate VBP cord-339886-th1da1bb 102 43 both both DT cord-339886-th1da1bb 102 44 phylodynamics phylodynamic NNS cord-339886-th1da1bb 102 45 studies study NNS cord-339886-th1da1bb 102 46 and and CC cord-339886-th1da1bb 102 47 attempts attempt VBZ cord-339886-th1da1bb 102 48 to to TO cord-339886-th1da1bb 102 49 infer infer VB cord-339886-th1da1bb 102 50 transmission transmission NN cord-339886-th1da1bb 102 51 events event NNS cord-339886-th1da1bb 102 52 42 42 CD cord-339886-th1da1bb 102 53 . . . cord-339886-th1da1bb 103 1 Phylodynamics Phylodynamics NNP cord-339886-th1da1bb 103 2 relies rely VBZ cord-339886-th1da1bb 103 3 on on IN cord-339886-th1da1bb 103 4 tools tool NNS cord-339886-th1da1bb 103 5 such such JJ cord-339886-th1da1bb 103 6 as as IN cord-339886-th1da1bb 103 7 Bayesian bayesian JJ cord-339886-th1da1bb 103 8 evolutionary evolutionary JJ cord-339886-th1da1bb 103 9 analysis analysis NN cord-339886-th1da1bb 103 10 sampling sampling NN cord-339886-th1da1bb 103 11 trees tree NNS cord-339886-th1da1bb 103 12 ( ( -LRB- cord-339886-th1da1bb 103 13 BEAST BEAST NNP cord-339886-th1da1bb 103 14 ) ) -RRB- cord-339886-th1da1bb 103 15 44 44 CD cord-339886-th1da1bb 103 16 , , , cord-339886-th1da1bb 103 17 in in IN cord-339886-th1da1bb 103 18 which which WDT cord-339886-th1da1bb 103 19 sequence sequence NN cord-339886-th1da1bb 103 20 data datum NNS cord-339886-th1da1bb 103 21 are be VBP cord-339886-th1da1bb 103 22 used use VBN cord-339886-th1da1bb 103 23 to to TO cord-339886-th1da1bb 103 24 build build VB cord-339886-th1da1bb 103 25 a a DT cord-339886-th1da1bb 103 26 time time NN cord-339886-th1da1bb 103 27 - - HYPH cord-339886-th1da1bb 103 28 labelled label VBN cord-339886-th1da1bb 103 29 phylogenetic phylogenetic JJ cord-339886-th1da1bb 103 30 tree tree NN cord-339886-th1da1bb 103 31 using use VBG cord-339886-th1da1bb 103 32 a a DT cord-339886-th1da1bb 103 33 specific specific JJ cord-339886-th1da1bb 103 34 evolutionary evolutionary JJ cord-339886-th1da1bb 103 35 process process NN cord-339886-th1da1bb 103 36 as as IN cord-339886-th1da1bb 103 37 a a DT cord-339886-th1da1bb 103 38 guide guide NN cord-339886-th1da1bb 103 39 -often -often NN cord-339886-th1da1bb 103 40 variations variation NNS cord-339886-th1da1bb 103 41 on on IN cord-339886-th1da1bb 103 42 a a DT cord-339886-th1da1bb 103 43 theme theme NN cord-339886-th1da1bb 103 44 of of IN cord-339886-th1da1bb 103 45 coalescent coalescent JJ cord-339886-th1da1bb 103 46 theory theory NN cord-339886-th1da1bb 103 47 45 45 CD cord-339886-th1da1bb 103 48 . . . cord-339886-th1da1bb 104 1 From from IN cord-339886-th1da1bb 104 2 the the DT cord-339886-th1da1bb 104 3 tree tree NN cord-339886-th1da1bb 104 4 , , , cord-339886-th1da1bb 104 5 one one PRP cord-339886-th1da1bb 104 6 can can MD cord-339886-th1da1bb 104 7 infer infer VB cord-339886-th1da1bb 104 8 epidemiological epidemiological JJ cord-339886-th1da1bb 104 9 parameters parameter NNS cord-339886-th1da1bb 104 10 , , , cord-339886-th1da1bb 104 11 including include VBG cord-339886-th1da1bb 104 12 the the DT cord-339886-th1da1bb 104 13 basic basic JJ cord-339886-th1da1bb 104 14 reproductive reproductive JJ cord-339886-th1da1bb 104 15 number number NN cord-339886-th1da1bb 104 16 R r NN cord-339886-th1da1bb 104 17 0 0 CD cord-339886-th1da1bb 104 18 ( ( -LRB- cord-339886-th1da1bb 104 19 REF ref NN cord-339886-th1da1bb 104 20 . . . cord-339886-th1da1bb 104 21 46 46 CD cord-339886-th1da1bb 104 22 ) ) -RRB- cord-339886-th1da1bb 104 23 . . . cord-339886-th1da1bb 105 1 While while IN cord-339886-th1da1bb 105 2 the the DT cord-339886-th1da1bb 105 3 insights insight NNS cord-339886-th1da1bb 105 4 that that WDT cord-339886-th1da1bb 105 5 can can MD cord-339886-th1da1bb 105 6 be be VB cord-339886-th1da1bb 105 7 gained gain VBN cord-339886-th1da1bb 105 8 from from IN cord-339886-th1da1bb 105 9 genomic genomic JJ cord-339886-th1da1bb 105 10 data datum NNS cord-339886-th1da1bb 105 11 alone alone RB cord-339886-th1da1bb 105 12 are be VBP cord-339886-th1da1bb 105 13 exciting exciting JJ cord-339886-th1da1bb 105 14 , , , cord-339886-th1da1bb 105 15 the the DT cord-339886-th1da1bb 105 16 utility utility NN cord-339886-th1da1bb 105 17 of of IN cord-339886-th1da1bb 105 18 phylodynamic phylodynamic JJ cord-339886-th1da1bb 105 19 approaches approach NNS cord-339886-th1da1bb 105 20 is be VBZ cord-339886-th1da1bb 105 21 greatly greatly RB cord-339886-th1da1bb 105 22 extended extend VBN cord-339886-th1da1bb 105 23 when when WRB cord-339886-th1da1bb 105 24 additional additional JJ cord-339886-th1da1bb 105 25 data datum NNS cord-339886-th1da1bb 105 26 are be VBP cord-339886-th1da1bb 105 27 integrated integrate VBN cord-339886-th1da1bb 105 28 into into IN cord-339886-th1da1bb 105 29 the the DT cord-339886-th1da1bb 105 30 models model NNS cord-339886-th1da1bb 105 31 ( ( -LRB- cord-339886-th1da1bb 105 32 reviewed review VBN cord-339886-th1da1bb 105 33 in in IN cord-339886-th1da1bb 105 34 REF REF NNP cord-339886-th1da1bb 105 35 . . . cord-339886-th1da1bb 106 1 47 47 LS cord-339886-th1da1bb 106 2 ) ) -RRB- cord-339886-th1da1bb 106 3 . . . cord-339886-th1da1bb 107 1 Genomic genomic JJ cord-339886-th1da1bb 107 2 epidemiology epidemiology NN cord-339886-th1da1bb 107 3 in in IN cord-339886-th1da1bb 107 4 action action NN cord-339886-th1da1bb 107 5 : : : cord-339886-th1da1bb 107 6 Ebola Ebola NNP cord-339886-th1da1bb 107 7 . . . cord-339886-th1da1bb 108 1 The the DT cord-339886-th1da1bb 108 2 many many JJ cord-339886-th1da1bb 108 3 genomic genomic JJ cord-339886-th1da1bb 108 4 epidemiology epidemiology NN cord-339886-th1da1bb 108 5 studies study NNS cord-339886-th1da1bb 108 6 from from IN cord-339886-th1da1bb 108 7 the the DT cord-339886-th1da1bb 108 8 Ebola Ebola NNP cord-339886-th1da1bb 108 9 outbreak outbreak NN cord-339886-th1da1bb 108 10 ( ( -LRB- cord-339886-th1da1bb 108 11 reviewed review VBN cord-339886-th1da1bb 108 12 in in IN cord-339886-th1da1bb 108 13 REF REF NNP cord-339886-th1da1bb 108 14 . . . cord-339886-th1da1bb 109 1 48 48 LS cord-339886-th1da1bb 109 2 ) ) -RRB- cord-339886-th1da1bb 109 3 used use VBN cord-339886-th1da1bb 109 4 bench bench NN cord-339886-th1da1bb 109 5 - - HYPH cord-339886-th1da1bb 109 6 top top NN cord-339886-th1da1bb 109 7 and and CC cord-339886-th1da1bb 109 8 portable portable JJ cord-339886-th1da1bb 109 9 sequencing sequencing NN cord-339886-th1da1bb 109 10 platforms platform NNS cord-339886-th1da1bb 109 11 to to TO cord-339886-th1da1bb 109 12 reveal reveal VB cord-339886-th1da1bb 109 13 outbreak outbreak NN cord-339886-th1da1bb 109 14 - - HYPH cord-339886-th1da1bb 109 15 level level NN cord-339886-th1da1bb 109 16 events event NNS cord-339886-th1da1bb 109 17 and and CC cord-339886-th1da1bb 109 18 epidemic epidemic NN cord-339886-th1da1bb 109 19 - - HYPH cord-339886-th1da1bb 109 20 level level NN cord-339886-th1da1bb 109 21 trends trend NNS cord-339886-th1da1bb 109 22 . . . cord-339886-th1da1bb 110 1 Real real JJ cord-339886-th1da1bb 110 2 - - HYPH cord-339886-th1da1bb 110 3 time time NN cord-339886-th1da1bb 110 4 analyses analysis NNS cord-339886-th1da1bb 110 5 published publish VBN cord-339886-th1da1bb 110 6 around around IN cord-339886-th1da1bb 110 7 the the DT cord-339886-th1da1bb 110 8 peak peak NN cord-339886-th1da1bb 110 9 of of IN cord-339886-th1da1bb 110 10 the the DT cord-339886-th1da1bb 110 11 epidemic epidemic NN cord-339886-th1da1bb 110 12 suggested suggest VBD cord-339886-th1da1bb 110 13 the the DT cord-339886-th1da1bb 110 14 following follow VBG cord-339886-th1da1bb 110 15 : : : cord-339886-th1da1bb 110 16 the the DT cord-339886-th1da1bb 110 17 outbreak outbreak NN cord-339886-th1da1bb 110 18 probably probably RB cord-339886-th1da1bb 110 19 arose arise VBD cord-339886-th1da1bb 110 20 from from IN cord-339886-th1da1bb 110 21 a a DT cord-339886-th1da1bb 110 22 single single JJ cord-339886-th1da1bb 110 23 introduction introduction NN cord-339886-th1da1bb 110 24 into into IN cord-339886-th1da1bb 110 25 humans human NNS cord-339886-th1da1bb 110 26 and and CC cord-339886-th1da1bb 110 27 not not RB cord-339886-th1da1bb 110 28 repeated repeat VBN cord-339886-th1da1bb 110 29 zoonotic zoonotic JJ cord-339886-th1da1bb 110 30 introductions introduction NNS cord-339886-th1da1bb 110 31 49 49 CD cord-339886-th1da1bb 110 32 , , , cord-339886-th1da1bb 110 33 50 50 CD cord-339886-th1da1bb 110 34 ; ; , cord-339886-th1da1bb 110 35 sexual sexual JJ cord-339886-th1da1bb 110 36 transmission transmission NN cord-339886-th1da1bb 110 37 had have VBD cord-339886-th1da1bb 110 38 a a DT cord-339886-th1da1bb 110 39 previously previously RB cord-339886-th1da1bb 110 40 unrecognized unrecognized JJ cord-339886-th1da1bb 110 41 role role NN cord-339886-th1da1bb 110 42 in in IN cord-339886-th1da1bb 110 43 maintaining maintain VBG cord-339886-th1da1bb 110 44 transmission transmission NN cord-339886-th1da1bb 110 45 chains chain NNS cord-339886-th1da1bb 110 46 51 51 CD cord-339886-th1da1bb 110 47 ; ; : cord-339886-th1da1bb 110 48 and and CC cord-339886-th1da1bb 110 49 survivor survivor NN cord-339886-th1da1bb 110 50 transmission transmission NN cord-339886-th1da1bb 110 51 -another -another WDT cord-339886-th1da1bb 110 52 un un NNP cord-339886-th1da1bb 110 53 recognized recognize VBD cord-339886-th1da1bb 110 54 phenomenon phenomenon NN cord-339886-th1da1bb 110 55 -contributed -contribute VBN cord-339886-th1da1bb 110 56 to to IN cord-339886-th1da1bb 110 57 disease disease NN cord-339886-th1da1bb 110 58 flare flare NN cord-339886-th1da1bb 110 59 - - HYPH cord-339886-th1da1bb 110 60 ups up NNS cord-339886-th1da1bb 110 61 later later RB cord-339886-th1da1bb 110 62 in in IN cord-339886-th1da1bb 110 63 the the DT cord-339886-th1da1bb 110 64 outbreak outbreak NN cord-339886-th1da1bb 110 65 52 52 CD cord-339886-th1da1bb 110 66 . . . cord-339886-th1da1bb 111 1 The the DT cord-339886-th1da1bb 111 2 first first JJ cord-339886-th1da1bb 111 3 sequencing sequencing NN cord-339886-th1da1bb 111 4 efforts effort NNS cord-339886-th1da1bb 111 5 , , , cord-339886-th1da1bb 111 6 all all DT cord-339886-th1da1bb 111 7 of of IN cord-339886-th1da1bb 111 8 which which WDT cord-339886-th1da1bb 111 9 had have VBD cord-339886-th1da1bb 111 10 an an DT cord-339886-th1da1bb 111 11 effect effect NN cord-339886-th1da1bb 111 12 on on IN cord-339886-th1da1bb 111 13 the the DT cord-339886-th1da1bb 111 14 epidemiological epidemiological JJ cord-339886-th1da1bb 111 15 response response NN cord-339886-th1da1bb 111 16 in in IN cord-339886-th1da1bb 111 17 real real JJ cord-339886-th1da1bb 111 18 time time NN cord-339886-th1da1bb 111 19 , , , cord-339886-th1da1bb 111 20 unfolded unfold VBD cord-339886-th1da1bb 111 21 months month NNS cord-339886-th1da1bb 111 22 into into IN cord-339886-th1da1bb 111 23 the the DT cord-339886-th1da1bb 111 24 epidemic epidemic NN cord-339886-th1da1bb 111 25 . . . cord-339886-th1da1bb 112 1 Had have VBD cord-339886-th1da1bb 112 2 they -PRON- PRP cord-339886-th1da1bb 112 3 been be VBN cord-339886-th1da1bb 112 4 deployed deploy VBN cord-339886-th1da1bb 112 5 earlier early RBR cord-339886-th1da1bb 112 6 , , , cord-339886-th1da1bb 112 7 we -PRON- PRP cord-339886-th1da1bb 112 8 can can MD cord-339886-th1da1bb 112 9 only only RB cord-339886-th1da1bb 112 10 speculate speculate VB cord-339886-th1da1bb 112 11 as as IN cord-339886-th1da1bb 112 12 to to IN cord-339886-th1da1bb 112 13 their -PRON- PRP$ cord-339886-th1da1bb 112 14 potential potential JJ cord-339886-th1da1bb 112 15 impact impact NN cord-339886-th1da1bb 112 16 . . . cord-339886-th1da1bb 113 1 Arguably arguably RB cord-339886-th1da1bb 113 2 , , , cord-339886-th1da1bb 113 3 the the DT cord-339886-th1da1bb 113 4 most most RBS cord-339886-th1da1bb 113 5 compelling compelling JJ cord-339886-th1da1bb 113 6 use use NN cord-339886-th1da1bb 113 7 of of IN cord-339886-th1da1bb 113 8 early early JJ cord-339886-th1da1bb 113 9 sequencing sequencing NN cord-339886-th1da1bb 113 10 would would MD cord-339886-th1da1bb 113 11 have have VB cord-339886-th1da1bb 113 12 been be VBN cord-339886-th1da1bb 113 13 to to TO cord-339886-th1da1bb 113 14 provide provide VB cord-339886-th1da1bb 113 15 a a DT cord-339886-th1da1bb 113 16 definitive definitive JJ cord-339886-th1da1bb 113 17 Ebola Ebola NNP cord-339886-th1da1bb 113 18 diagnosis diagnosis NN cord-339886-th1da1bb 113 19 in in IN cord-339886-th1da1bb 113 20 this this DT cord-339886-th1da1bb 113 21 previously previously RB cord-339886-th1da1bb 113 22 unaffected unaffected JJ cord-339886-th1da1bb 113 23 region region NN cord-339886-th1da1bb 113 24 of of IN cord-339886-th1da1bb 113 25 West West NNP cord-339886-th1da1bb 113 26 Africa Africa NNP cord-339886-th1da1bb 113 27 . . . cord-339886-th1da1bb 114 1 However however RB cord-339886-th1da1bb 114 2 , , , cord-339886-th1da1bb 114 3 even even RB cord-339886-th1da1bb 114 4 after after IN cord-339886-th1da1bb 114 5 the the DT cord-339886-th1da1bb 114 6 outbreak outbreak NN cord-339886-th1da1bb 114 7 was be VBD cord-339886-th1da1bb 114 8 underway underway JJ cord-339886-th1da1bb 114 9 , , , cord-339886-th1da1bb 114 10 sequencing sequencing NN cord-339886-th1da1bb 114 11 could could MD cord-339886-th1da1bb 114 12 have have VB cord-339886-th1da1bb 114 13 benefited benefit VBN cord-339886-th1da1bb 114 14 the the DT cord-339886-th1da1bb 114 15 public public JJ cord-339886-th1da1bb 114 16 health health NN cord-339886-th1da1bb 114 17 response response NN cord-339886-th1da1bb 114 18 . . . cord-339886-th1da1bb 115 1 For for IN cord-339886-th1da1bb 115 2 example example NN cord-339886-th1da1bb 115 3 , , , cord-339886-th1da1bb 115 4 ruling rule VBG cord-339886-th1da1bb 115 5 out out RP cord-339886-th1da1bb 115 6 bush bush NNP cord-339886-th1da1bb 115 7 meat meat NN cord-339886-th1da1bb 115 8 as as IN cord-339886-th1da1bb 115 9 a a DT cord-339886-th1da1bb 115 10 source source NN cord-339886-th1da1bb 115 11 of of IN cord-339886-th1da1bb 115 12 repeated repeat VBN cord-339886-th1da1bb 115 13 viral viral JJ cord-339886-th1da1bb 115 14 introductions introduction NNS cord-339886-th1da1bb 115 15 could could MD cord-339886-th1da1bb 115 16 have have VB cord-339886-th1da1bb 115 17 changed change VBN cord-339886-th1da1bb 115 18 public public JJ cord-339886-th1da1bb 115 19 health health NN cord-339886-th1da1bb 115 20 messaging messaging NN cord-339886-th1da1bb 115 21 campaigns campaign NNS cord-339886-th1da1bb 115 22 from from IN cord-339886-th1da1bb 115 23 avoiding avoid VBG cord-339886-th1da1bb 115 24 bush bush NNP cord-339886-th1da1bb 115 25 meat meat NN cord-339886-th1da1bb 115 26 to to IN cord-339886-th1da1bb 115 27 the the DT cord-339886-th1da1bb 115 28 importance importance NN cord-339886-th1da1bb 115 29 of of IN cord-339886-th1da1bb 115 30 hygiene hygiene NN cord-339886-th1da1bb 115 31 and and CC cord-339886-th1da1bb 115 32 safe safe JJ cord-339886-th1da1bb 115 33 funeral funeral NN cord-339886-th1da1bb 115 34 practices practice NNS cord-339886-th1da1bb 115 35 53 53 CD cord-339886-th1da1bb 115 36 , , , cord-339886-th1da1bb 115 37 potentially potentially RB cord-339886-th1da1bb 115 38 averting avert VBG cord-339886-th1da1bb 115 39 some some DT cord-339886-th1da1bb 115 40 cases case NNS cord-339886-th1da1bb 115 41 . . . cord-339886-th1da1bb 116 1 Portable portable JJ cord-339886-th1da1bb 116 2 sequencing sequencing NN cord-339886-th1da1bb 116 3 and and CC cord-339886-th1da1bb 116 4 phylodynamic phylodynamic JJ cord-339886-th1da1bb 116 5 approaches approach NNS cord-339886-th1da1bb 116 6 are be VBP cord-339886-th1da1bb 116 7 currently currently RB cord-339886-th1da1bb 116 8 being be VBG cord-339886-th1da1bb 116 9 deployed deploy VBN cord-339886-th1da1bb 116 10 in in IN cord-339886-th1da1bb 116 11 the the DT cord-339886-th1da1bb 116 12 ongoing ongoing JJ cord-339886-th1da1bb 116 13 Zika Zika NNP cord-339886-th1da1bb 116 14 epidemic epidemic NN cord-339886-th1da1bb 116 15 ; ; : cord-339886-th1da1bb 116 16 whether whether IN cord-339886-th1da1bb 116 17 the the DT cord-339886-th1da1bb 116 18 real real JJ cord-339886-th1da1bb 116 19 - - HYPH cord-339886-th1da1bb 116 20 time time NN cord-339886-th1da1bb 116 21 reporting reporting NN cord-339886-th1da1bb 116 22 of of IN cord-339886-th1da1bb 116 23 genomic genomic JJ cord-339886-th1da1bb 116 24 findings finding NNS cord-339886-th1da1bb 116 25 is be VBZ cord-339886-th1da1bb 116 26 able able JJ cord-339886-th1da1bb 116 27 to to TO cord-339886-th1da1bb 116 28 alter alter VB cord-339886-th1da1bb 116 29 the the DT cord-339886-th1da1bb 116 30 course course NN cord-339886-th1da1bb 116 31 of of IN cord-339886-th1da1bb 116 32 a a DT cord-339886-th1da1bb 116 33 vector vector NN cord-339886-th1da1bb 116 34 - - HYPH cord-339886-th1da1bb 116 35 borne bear VBN cord-339886-th1da1bb 116 36 epidemic epidemic NN cord-339886-th1da1bb 116 37 remains remain VBZ cord-339886-th1da1bb 116 38 to to TO cord-339886-th1da1bb 116 39 be be VB cord-339886-th1da1bb 116 40 seen see VBN cord-339886-th1da1bb 116 41 . . . cord-339886-th1da1bb 117 1 Retrospective retrospective JJ cord-339886-th1da1bb 117 2 phylodynamic phylodynamic JJ cord-339886-th1da1bb 117 3 investigations investigation NNS cord-339886-th1da1bb 117 4 are be VBP cord-339886-th1da1bb 117 5 also also RB cord-339886-th1da1bb 117 6 useful useful JJ cord-339886-th1da1bb 117 7 for for IN cord-339886-th1da1bb 117 8 pandemic pandemic NN cord-339886-th1da1bb 117 9 preparedness preparedness NN cord-339886-th1da1bb 117 10 planning planning NN cord-339886-th1da1bb 117 11 . . . cord-339886-th1da1bb 118 1 A a DT cord-339886-th1da1bb 118 2 recent recent JJ cord-339886-th1da1bb 118 3 analysis analysis NN cord-339886-th1da1bb 118 4 of of IN cord-339886-th1da1bb 118 5 1,610 1,610 CD cord-339886-th1da1bb 118 6 Ebola Ebola NNP cord-339886-th1da1bb 118 7 virus virus NN cord-339886-th1da1bb 118 8 genomes genome NNS cord-339886-th1da1bb 118 9 -approximately -approximately RB cord-339886-th1da1bb 118 10 5 5 CD cord-339886-th1da1bb 118 11 % % NN cord-339886-th1da1bb 118 12 of of IN cord-339886-th1da1bb 118 13 all all DT cord-339886-th1da1bb 118 14 cases case NNS cord-339886-th1da1bb 119 1 -reconstructs -reconstructs . cord-339886-th1da1bb 120 1 the the DT cord-339886-th1da1bb 120 2 movement movement NN cord-339886-th1da1bb 120 3 of of IN cord-339886-th1da1bb 120 4 the the DT cord-339886-th1da1bb 120 5 virus virus NN cord-339886-th1da1bb 120 6 across across IN cord-339886-th1da1bb 120 7 West West NNP cord-339886-th1da1bb 120 8 Africa Africa NNP cord-339886-th1da1bb 120 9 and and CC cord-339886-th1da1bb 120 10 reveals reveal VBZ cord-339886-th1da1bb 120 11 drivers driver NNS cord-339886-th1da1bb 120 12 for for IN cord-339886-th1da1bb 120 13 its -PRON- PRP$ cord-339886-th1da1bb 120 14 spread spread NN cord-339886-th1da1bb 120 15 1 1 CD cord-339886-th1da1bb 120 16 . . . cord-339886-th1da1bb 121 1 The the DT cord-339886-th1da1bb 121 2 authors author NNS cord-339886-th1da1bb 121 3 deduce deduce VBP cord-339886-th1da1bb 121 4 that that IN cord-339886-th1da1bb 121 5 Ebola Ebola NNP cord-339886-th1da1bb 121 6 importation importation NN cord-339886-th1da1bb 121 7 was be VBD cord-339886-th1da1bb 121 8 more more RBR cord-339886-th1da1bb 121 9 likely likely JJ cord-339886-th1da1bb 121 10 to to TO cord-339886-th1da1bb 121 11 occur occur VB cord-339886-th1da1bb 121 12 between between IN cord-339886-th1da1bb 121 13 regions region NNS cord-339886-th1da1bb 121 14 of of IN cord-339886-th1da1bb 121 15 a a DT cord-339886-th1da1bb 121 16 country country NN cord-339886-th1da1bb 121 17 than than IN cord-339886-th1da1bb 121 18 across across IN cord-339886-th1da1bb 121 19 international international JJ cord-339886-th1da1bb 121 20 borders border NNS cord-339886-th1da1bb 121 21 and and CC cord-339886-th1da1bb 121 22 that that IN cord-339886-th1da1bb 121 23 both both DT cord-339886-th1da1bb 121 24 population population NN cord-339886-th1da1bb 121 25 size size NN cord-339886-th1da1bb 121 26 and and CC cord-339886-th1da1bb 121 27 distance distance NN cord-339886-th1da1bb 121 28 to to IN cord-339886-th1da1bb 121 29 a a DT cord-339886-th1da1bb 121 30 nearby nearby JJ cord-339886-th1da1bb 121 31 large large JJ cord-339886-th1da1bb 121 32 urban urban JJ cord-339886-th1da1bb 121 33 centre centre NN cord-339886-th1da1bb 121 34 were be VBD cord-339886-th1da1bb 121 35 associated associate VBN cord-339886-th1da1bb 121 36 with with IN cord-339886-th1da1bb 121 37 local local JJ cord-339886-th1da1bb 121 38 expansion expansion NN cord-339886-th1da1bb 121 39 of of IN cord-339886-th1da1bb 121 40 the the DT cord-339886-th1da1bb 121 41 virus virus NN cord-339886-th1da1bb 121 42 . . . cord-339886-th1da1bb 122 1 These these DT cord-339886-th1da1bb 122 2 findings finding NNS cord-339886-th1da1bb 122 3 may may MD cord-339886-th1da1bb 122 4 affect affect VB cord-339886-th1da1bb 122 5 decision decision NN cord-339886-th1da1bb 122 6 - - HYPH cord-339886-th1da1bb 122 7 making make VBG cord-339886-th1da1bb 122 8 around around IN cord-339886-th1da1bb 122 9 border border NN cord-339886-th1da1bb 122 10 closures closure NNS cord-339886-th1da1bb 122 11 in in IN cord-339886-th1da1bb 122 12 future future JJ cord-339886-th1da1bb 122 13 Ebola Ebola NNP cord-339886-th1da1bb 122 14 outbreaks outbreak NNS cord-339886-th1da1bb 122 15 and and CC cord-339886-th1da1bb 122 16 point point NN cord-339886-th1da1bb 122 17 to to IN cord-339886-th1da1bb 122 18 the the DT cord-339886-th1da1bb 122 19 need need NN cord-339886-th1da1bb 122 20 to to TO cord-339886-th1da1bb 122 21 develop develop VB cord-339886-th1da1bb 122 22 surveillance surveillance NN cord-339886-th1da1bb 122 23 , , , cord-339886-th1da1bb 122 24 diagnostic diagnostic JJ cord-339886-th1da1bb 122 25 and and CC cord-339886-th1da1bb 122 26 treatment treatment NN cord-339886-th1da1bb 122 27 capacity capacity NN cord-339886-th1da1bb 122 28 in in IN cord-339886-th1da1bb 122 29 urban urban JJ cord-339886-th1da1bb 122 30 centres centre NNS cord-339886-th1da1bb 122 31 . . . cord-339886-th1da1bb 123 1 The the DT cord-339886-th1da1bb 123 2 role role NN cord-339886-th1da1bb 123 3 of of IN cord-339886-th1da1bb 123 4 the the DT cord-339886-th1da1bb 123 5 environment environment NN cord-339886-th1da1bb 123 6 In in IN cord-339886-th1da1bb 123 7 deploying deploy VBG cord-339886-th1da1bb 123 8 genomics genomic NNS cord-339886-th1da1bb 123 9 for for IN cord-339886-th1da1bb 123 10 surveillance surveillance NN cord-339886-th1da1bb 123 11 , , , cord-339886-th1da1bb 123 12 diagnostics diagnostic NNS cord-339886-th1da1bb 123 13 and and CC cord-339886-th1da1bb 123 14 epidemiological epidemiological JJ cord-339886-th1da1bb 123 15 investigation investigation NN cord-339886-th1da1bb 123 16 , , , cord-339886-th1da1bb 123 17 a a DT cord-339886-th1da1bb 123 18 key key JJ cord-339886-th1da1bb 123 19 question question NN cord-339886-th1da1bb 123 20 remains remain VBZ cord-339886-th1da1bb 123 21 : : : cord-339886-th1da1bb 124 1 where where WRB cord-339886-th1da1bb 124 2 ? ? . cord-339886-th1da1bb 125 1 Many many JJ cord-339886-th1da1bb 125 2 regions region NNS cord-339886-th1da1bb 125 3 lack lack VBP cord-339886-th1da1bb 125 4 the the DT cord-339886-th1da1bb 125 5 diagnostic diagnostic JJ cord-339886-th1da1bb 125 6 laboratory laboratory NN cord-339886-th1da1bb 125 7 capacity capacity NN cord-339886-th1da1bb 125 8 to to TO cord-339886-th1da1bb 125 9 carry carry VB cord-339886-th1da1bb 125 10 out out RP cord-339886-th1da1bb 125 11 basic basic JJ cord-339886-th1da1bb 125 12 surveillance surveillance NN cord-339886-th1da1bb 125 13 , , , cord-339886-th1da1bb 125 14 but but CC cord-339886-th1da1bb 125 15 continuous continuous JJ cord-339886-th1da1bb 125 16 genomic genomic JJ cord-339886-th1da1bb 125 17 surveillance surveillance NN cord-339886-th1da1bb 125 18 in in IN cord-339886-th1da1bb 125 19 all all DT cord-339886-th1da1bb 125 20 of of IN cord-339886-th1da1bb 125 21 these these DT cord-339886-th1da1bb 125 22 settings setting NNS cord-339886-th1da1bb 125 23 would would MD cord-339886-th1da1bb 125 24 be be VB cord-339886-th1da1bb 125 25 impossible impossible JJ cord-339886-th1da1bb 125 26 . . . cord-339886-th1da1bb 126 1 Numerous numerous JJ cord-339886-th1da1bb 126 2 projects project NNS cord-339886-th1da1bb 126 3 have have VBP cord-339886-th1da1bb 126 4 attempted attempt VBN cord-339886-th1da1bb 126 5 to to TO cord-339886-th1da1bb 126 6 describe describe VB cord-339886-th1da1bb 126 7 the the DT cord-339886-th1da1bb 126 8 pool pool NN cord-339886-th1da1bb 126 9 of of IN cord-339886-th1da1bb 126 10 geographic geographic JJ cord-339886-th1da1bb 126 11 hot hot JJ cord-339886-th1da1bb 126 12 spots spot NNS cord-339886-th1da1bb 126 13 and and CC cord-339886-th1da1bb 126 14 candidate candidate NN cord-339886-th1da1bb 126 15 pathogens pathogen NNS cord-339886-th1da1bb 126 16 from from IN cord-339886-th1da1bb 126 17 which which WDT cord-339886-th1da1bb 126 18 the the DT cord-339886-th1da1bb 126 19 next next JJ cord-339886-th1da1bb 126 20 epidemic epidemic NN cord-339886-th1da1bb 126 21 or or CC cord-339886-th1da1bb 126 22 pandemic pandemic NN cord-339886-th1da1bb 126 23 will will MD cord-339886-th1da1bb 126 24 arise arise VB cord-339886-th1da1bb 126 25 . . . cord-339886-th1da1bb 127 1 Determining determine VBG cord-339886-th1da1bb 127 2 these these DT cord-339886-th1da1bb 127 3 factors factor NNS cord-339886-th1da1bb 127 4 is be VBZ cord-339886-th1da1bb 127 5 key key JJ cord-339886-th1da1bb 127 6 to to IN cord-339886-th1da1bb 127 7 predicting predict VBG cord-339886-th1da1bb 127 8 and and CC cord-339886-th1da1bb 127 9 preventing prevent VBG cord-339886-th1da1bb 127 10 spillover spillover NN cord-339886-th1da1bb 127 11 events event NNS cord-339886-th1da1bb 127 12 ( ( -LRB- cord-339886-th1da1bb 127 13 FIG fig NN cord-339886-th1da1bb 127 14 . . . cord-339886-th1da1bb 127 15 4 4 LS cord-339886-th1da1bb 127 16 ) ) -RRB- cord-339886-th1da1bb 127 17 55 55 CD cord-339886-th1da1bb 127 18 ) ) -RRB- cord-339886-th1da1bb 127 19 . . . cord-339886-th1da1bb 128 1 They -PRON- PRP cord-339886-th1da1bb 128 2 report report VBP cord-339886-th1da1bb 128 3 an an DT cord-339886-th1da1bb 128 4 increasing increase VBG cord-339886-th1da1bb 128 5 number number NN cord-339886-th1da1bb 128 6 of of IN cord-339886-th1da1bb 128 7 events event NNS cord-339886-th1da1bb 128 8 each each DT cord-339886-th1da1bb 128 9 decade decade NN cord-339886-th1da1bb 128 10 , , , cord-339886-th1da1bb 128 11 generally generally RB cord-339886-th1da1bb 128 12 located locate VBN cord-339886-th1da1bb 128 13 in in IN cord-339886-th1da1bb 128 14 hot hot JJ cord-339886-th1da1bb 128 15 spots spot NNS cord-339886-th1da1bb 128 16 defined define VBN cord-339886-th1da1bb 128 17 by by IN cord-339886-th1da1bb 128 18 specific specific JJ cord-339886-th1da1bb 128 19 environmental environmental JJ cord-339886-th1da1bb 128 20 , , , cord-339886-th1da1bb 128 21 ecological ecological JJ cord-339886-th1da1bb 128 22 and and CC cord-339886-th1da1bb 128 23 socio socio JJ cord-339886-th1da1bb 128 24 - - HYPH cord-339886-th1da1bb 128 25 economic economic JJ cord-339886-th1da1bb 128 26 characteristics characteristic NNS cord-339886-th1da1bb 128 27 . . . cord-339886-th1da1bb 129 1 Most Most JJS cord-339886-th1da1bb 129 2 EIDs eid NNS cord-339886-th1da1bb 129 3 are be VBP cord-339886-th1da1bb 129 4 zoonotic zoonotic JJ cord-339886-th1da1bb 129 5 in in IN cord-339886-th1da1bb 129 6 origin origin NN cord-339886-th1da1bb 129 7 , , , cord-339886-th1da1bb 129 8 with with IN cord-339886-th1da1bb 129 9 the the DT cord-339886-th1da1bb 129 10 highest high JJS cord-339886-th1da1bb 129 11 risk risk NN cord-339886-th1da1bb 129 12 of of IN cord-339886-th1da1bb 129 13 spillover spillover NN cord-339886-th1da1bb 129 14 in in IN cord-339886-th1da1bb 129 15 regions region NNS cord-339886-th1da1bb 129 16 with with IN cord-339886-th1da1bb 129 17 high high JJ cord-339886-th1da1bb 129 18 wildlife wildlife NN cord-339886-th1da1bb 129 19 diversity diversity NN cord-339886-th1da1bb 129 20 that that WDT cord-339886-th1da1bb 129 21 have have VBP cord-339886-th1da1bb 129 22 experienced experience VBN cord-339886-th1da1bb 129 23 recent recent JJ cord-339886-th1da1bb 129 24 demographic demographic JJ cord-339886-th1da1bb 129 25 change change NN cord-339886-th1da1bb 129 26 and/or and/or CC cord-339886-th1da1bb 130 1 recent recent JJ cord-339886-th1da1bb 130 2 increases increase NNS cord-339886-th1da1bb 130 3 in in IN cord-339886-th1da1bb 130 4 farming farming NN cord-339886-th1da1bb 130 5 activity activity NN cord-339886-th1da1bb 130 6 55 55 CD cord-339886-th1da1bb 130 7 . . . cord-339886-th1da1bb 131 1 A a DT cord-339886-th1da1bb 131 2 global global JJ cord-339886-th1da1bb 131 3 biogeographic biogeographic JJ cord-339886-th1da1bb 131 4 analysis analysis NN cord-339886-th1da1bb 131 5 of of IN cord-339886-th1da1bb 131 6 human human JJ cord-339886-th1da1bb 131 7 infectious infectious JJ cord-339886-th1da1bb 131 8 disease disease NN cord-339886-th1da1bb 131 9 further far RBR cord-339886-th1da1bb 131 10 supports support VBZ cord-339886-th1da1bb 131 11 the the DT cord-339886-th1da1bb 131 12 use use NN cord-339886-th1da1bb 131 13 of of IN cord-339886-th1da1bb 131 14 biodiversity biodiversity NN cord-339886-th1da1bb 131 15 as as IN cord-339886-th1da1bb 131 16 a a DT cord-339886-th1da1bb 131 17 proxy proxy NN cord-339886-th1da1bb 131 18 for for IN cord-339886-th1da1bb 131 19 EID EID NNP cord-339886-th1da1bb 131 20 hot hot JJ cord-339886-th1da1bb 131 21 spots spot NNS cord-339886-th1da1bb 131 22 56 56 CD cord-339886-th1da1bb 131 23 , , , cord-339886-th1da1bb 131 24 and and CC cord-339886-th1da1bb 131 25 reviews review NNS cord-339886-th1da1bb 131 26 focused focus VBD cord-339886-th1da1bb 131 27 on on IN cord-339886-th1da1bb 131 28 systems system NNS cord-339886-th1da1bb 131 29 - - HYPH cord-339886-th1da1bb 131 30 level level NN cord-339886-th1da1bb 131 31 , , , cord-339886-th1da1bb 131 32 rather rather RB cord-339886-th1da1bb 131 33 than than IN cord-339886-th1da1bb 131 34 ecological ecological JJ cord-339886-th1da1bb 131 35 , , , cord-339886-th1da1bb 131 36 factors factor NNS cord-339886-th1da1bb 131 37 identify identify VBP cord-339886-th1da1bb 131 38 the the DT cord-339886-th1da1bb 131 39 breakdown breakdown NN cord-339886-th1da1bb 131 40 of of IN cord-339886-th1da1bb 131 41 local local JJ cord-339886-th1da1bb 131 42 public public JJ cord-339886-th1da1bb 131 43 health health NN cord-339886-th1da1bb 131 44 systems system NNS cord-339886-th1da1bb 131 45 as as IN cord-339886-th1da1bb 131 46 drivers driver NNS cord-339886-th1da1bb 131 47 of of IN cord-339886-th1da1bb 131 48 outbreaks outbreak NNS cord-339886-th1da1bb 131 49 , , , cord-339886-th1da1bb 131 50 suggesting suggest VBG cord-339886-th1da1bb 131 51 that that IN cord-339886-th1da1bb 131 52 surveillance surveillance NN cord-339886-th1da1bb 131 53 ought ought MD cord-339886-th1da1bb 131 54 to to TO cord-339886-th1da1bb 131 55 be be VB cord-339886-th1da1bb 131 56 targeted target VBN cord-339886-th1da1bb 131 57 to to IN cord-339886-th1da1bb 131 58 settings setting NNS cord-339886-th1da1bb 131 59 where where WRB cord-339886-th1da1bb 131 60 bio bio NN cord-339886-th1da1bb 131 61 diversity diversity NN cord-339886-th1da1bb 131 62 and and CC cord-339886-th1da1bb 131 63 changing change VBG cord-339886-th1da1bb 131 64 demographics demographic NNS cord-339886-th1da1bb 131 65 meet meet VBP cord-339886-th1da1bb 131 66 inadequate inadequate JJ cord-339886-th1da1bb 131 67 sanitation sanitation NN cord-339886-th1da1bb 131 68 and and CC cord-339886-th1da1bb 131 69 hygiene hygiene NN cord-339886-th1da1bb 131 70 , , , cord-339886-th1da1bb 131 71 lack lack NN cord-339886-th1da1bb 131 72 of of IN cord-339886-th1da1bb 131 73 a a DT cord-339886-th1da1bb 131 74 public public JJ cord-339886-th1da1bb 131 75 health health NN cord-339886-th1da1bb 131 76 infra infra NN cord-339886-th1da1bb 131 77 structure structure NN cord-339886-th1da1bb 131 78 for for IN cord-339886-th1da1bb 131 79 deliver deliver VB cord-339886-th1da1bb 131 80 ing ing DT cord-339886-th1da1bb 131 81 interventions intervention NNS cord-339886-th1da1bb 131 82 and and CC cord-339886-th1da1bb 131 83 no no NN cord-339886-th1da1bb 131 84 or or CC cord-339886-th1da1bb 131 85 limited limited JJ cord-339886-th1da1bb 131 86 resources resource NNS cord-339886-th1da1bb 131 87 for for IN cord-339886-th1da1bb 131 88 control control NN cord-339886-th1da1bb 131 89 of of IN cord-339886-th1da1bb 131 90 zoonoses zoonosis NNS cord-339886-th1da1bb 131 91 and and CC cord-339886-th1da1bb 131 92 vector vector NN cord-339886-th1da1bb 131 93 - - HYPH cord-339886-th1da1bb 131 94 borne bear VBN cord-339886-th1da1bb 131 95 diseases disease NNS cord-339886-th1da1bb 131 96 57 57 CD cord-339886-th1da1bb 131 97 . . . cord-339886-th1da1bb 132 1 These these DT cord-339886-th1da1bb 132 2 analyses analysis NNS cord-339886-th1da1bb 132 3 provide provide VBP cord-339886-th1da1bb 132 4 a a DT cord-339886-th1da1bb 132 5 shortlist shortlist NN cord-339886-th1da1bb 132 6 of of IN cord-339886-th1da1bb 132 7 regions region NNS cord-339886-th1da1bb 132 8 , , , cord-339886-th1da1bb 132 9 including include VBG cord-339886-th1da1bb 132 10 parts part NNS cord-339886-th1da1bb 132 11 of of IN cord-339886-th1da1bb 132 12 eastern eastern JJ cord-339886-th1da1bb 132 13 and and CC cord-339886-th1da1bb 132 14 southeastern southeastern JJ cord-339886-th1da1bb 132 15 Asia Asia NNP cord-339886-th1da1bb 132 16 , , , cord-339886-th1da1bb 132 17 India India NNP cord-339886-th1da1bb 132 18 and and CC cord-339886-th1da1bb 132 19 equatorial equatorial JJ cord-339886-th1da1bb 132 20 Africa Africa NNP cord-339886-th1da1bb 132 21 , , , cord-339886-th1da1bb 132 22 on on IN cord-339886-th1da1bb 132 23 which which WDT cord-339886-th1da1bb 132 24 genomic genomic JJ cord-339886-th1da1bb 132 25 and and CC cord-339886-th1da1bb 132 26 other other JJ cord-339886-th1da1bb 132 27 surveillance surveillance NN cord-339886-th1da1bb 132 28 activities activity NNS cord-339886-th1da1bb 132 29 should should MD cord-339886-th1da1bb 132 30 be be VB cord-339886-th1da1bb 132 31 focused focus VBN cord-339886-th1da1bb 132 32 55 55 CD cord-339886-th1da1bb 132 33 , , , cord-339886-th1da1bb 132 34 58 58 CD cord-339886-th1da1bb 132 35 . . . cord-339886-th1da1bb 133 1 Within within IN cord-339886-th1da1bb 133 2 these these DT cord-339886-th1da1bb 133 3 regions region NNS cord-339886-th1da1bb 133 4 , , , cord-339886-th1da1bb 133 5 sewer sewer NN cord-339886-th1da1bb 133 6 systems system NNS cord-339886-th1da1bb 133 7 and and CC cord-339886-th1da1bb 133 8 wastewater wastewater NN cord-339886-th1da1bb 133 9 treatment treatment NN cord-339886-th1da1bb 133 10 plants plant NNS cord-339886-th1da1bb 133 11 could could MD cord-339886-th1da1bb 133 12 be be VB cord-339886-th1da1bb 133 13 important important JJ cord-339886-th1da1bb 133 14 foci foci NN cord-339886-th1da1bb 133 15 for for IN cord-339886-th1da1bb 133 16 sample sample NN cord-339886-th1da1bb 133 17 collection collection NN cord-339886-th1da1bb 133 18 , , , cord-339886-th1da1bb 133 19 providing provide VBG cord-339886-th1da1bb 133 20 a a DT cord-339886-th1da1bb 133 21 single single JJ cord-339886-th1da1bb 133 22 point point NN cord-339886-th1da1bb 133 23 of of IN cord-339886-th1da1bb 133 24 entry entry NN cord-339886-th1da1bb 133 25 to to IN cord-339886-th1da1bb 133 26 biological biological JJ cord-339886-th1da1bb 133 27 readouts readout NNS cord-339886-th1da1bb 133 28 from from IN cord-339886-th1da1bb 133 29 an an DT cord-339886-th1da1bb 133 30 entire entire JJ cord-339886-th1da1bb 133 31 community community NN cord-339886-th1da1bb 133 32 . . . cord-339886-th1da1bb 134 1 Indeed indeed RB cord-339886-th1da1bb 134 2 , , , cord-339886-th1da1bb 134 3 proof proof NN cord-339886-th1da1bb 134 4 - - HYPH cord-339886-th1da1bb 134 5 of of IN cord-339886-th1da1bb 134 6 - - HYPH cord-339886-th1da1bb 134 7 concept concept NN cord-339886-th1da1bb 134 8 metagenomics metagenomic NNS cord-339886-th1da1bb 134 9 studies study NNS cord-339886-th1da1bb 134 10 have have VBP cord-339886-th1da1bb 134 11 revealed reveal VBN cord-339886-th1da1bb 134 12 the the DT cord-339886-th1da1bb 134 13 presence presence NN cord-339886-th1da1bb 134 14 of of IN cord-339886-th1da1bb 134 15 antibiotic antibiotic JJ cord-339886-th1da1bb 134 16 resistance resistance NN cord-339886-th1da1bb 134 17 genes gene NNS cord-339886-th1da1bb 134 18 59 59 CD cord-339886-th1da1bb 134 19 , , , cord-339886-th1da1bb 134 20 human human JJ cord-339886-th1da1bb 134 21 - - HYPH cord-339886-th1da1bb 134 22 specific specific JJ cord-339886-th1da1bb 134 23 viruses virus NNS cord-339886-th1da1bb 134 24 60 60 CD cord-339886-th1da1bb 134 25 61 61 CD cord-339886-th1da1bb 134 26 . . . cord-339886-th1da1bb 135 1 Most Most JJS cord-339886-th1da1bb 135 2 were be VBD cord-339886-th1da1bb 135 3 zoonotic zoonotic JJ cord-339886-th1da1bb 135 4 in in IN cord-339886-th1da1bb 135 5 origin origin NN cord-339886-th1da1bb 135 6 , , , cord-339886-th1da1bb 135 7 and and CC cord-339886-th1da1bb 135 8 over over IN cord-339886-th1da1bb 135 9 one one CD cord-339886-th1da1bb 135 10 - - HYPH cord-339886-th1da1bb 135 11 quarter quarter NN cord-339886-th1da1bb 135 12 had have VBD cord-339886-th1da1bb 135 13 been be VBN cord-339886-th1da1bb 135 14 detected detect VBN cord-339886-th1da1bb 135 15 in in IN cord-339886-th1da1bb 135 16 non non JJ cord-339886-th1da1bb 135 17 - - JJ cord-339886-th1da1bb 135 18 human human JJ cord-339886-th1da1bb 135 19 species specie NNS cord-339886-th1da1bb 135 20 many many JJ cord-339886-th1da1bb 135 21 years year NNS cord-339886-th1da1bb 135 22 before before IN cord-339886-th1da1bb 135 23 being be VBG cord-339886-th1da1bb 135 24 identified identify VBN cord-339886-th1da1bb 135 25 as as IN cord-339886-th1da1bb 135 26 human human JJ cord-339886-th1da1bb 135 27 pathogens pathogen NNS cord-339886-th1da1bb 135 28 . . . cord-339886-th1da1bb 136 1 A a DT cord-339886-th1da1bb 136 2 later later JJ cord-339886-th1da1bb 136 3 review review NN cord-339886-th1da1bb 136 4 reiterates reiterate VBZ cord-339886-th1da1bb 136 5 this this DT cord-339886-th1da1bb 136 6 observation observation NN cord-339886-th1da1bb 136 7 , , , cord-339886-th1da1bb 136 8 noting note VBG cord-339886-th1da1bb 136 9 that that IN cord-339886-th1da1bb 136 10 recent recent JJ cord-339886-th1da1bb 136 11 agents agent NNS cord-339886-th1da1bb 136 12 of of IN cord-339886-th1da1bb 136 13 concern concern NN cord-339886-th1da1bb 136 14 -Ebola -ebola NN cord-339886-th1da1bb 136 15 , , , cord-339886-th1da1bb 136 16 Zika Zika NNP cord-339886-th1da1bb 136 17 and and CC cord-339886-th1da1bb 136 18 chikungunya chikungunya NN cord-339886-th1da1bb 136 19 -had -had : cord-339886-th1da1bb 136 20 been be VBN cord-339886-th1da1bb 136 21 identified identify VBN cord-339886-th1da1bb 136 22 decades decade NNS cord-339886-th1da1bb 136 23 before before IN cord-339886-th1da1bb 136 24 they -PRON- PRP cord-339886-th1da1bb 136 25 achieved achieve VBD cord-339886-th1da1bb 136 26 pandemic pandemic JJ cord-339886-th1da1bb 136 27 magnitude magnitude NN cord-339886-th1da1bb 136 28 62 62 CD cord-339886-th1da1bb 136 29 . . . cord-339886-th1da1bb 137 1 As as IN cord-339886-th1da1bb 137 2 a a DT cord-339886-th1da1bb 137 3 result result NN cord-339886-th1da1bb 137 4 of of IN cord-339886-th1da1bb 137 5 NGS NGS NNP cord-339886-th1da1bb 137 6 technology technology NN cord-339886-th1da1bb 137 7 , , , cord-339886-th1da1bb 137 8 the the DT cord-339886-th1da1bb 137 9 pace pace NN cord-339886-th1da1bb 137 10 of of IN cord-339886-th1da1bb 137 11 novel novel JJ cord-339886-th1da1bb 137 12 virus virus NN cord-339886-th1da1bb 137 13 discovery discovery NN cord-339886-th1da1bb 137 14 is be VBZ cord-339886-th1da1bb 137 15 accelerating accelerate VBG cord-339886-th1da1bb 137 16 , , , cord-339886-th1da1bb 137 17 with with IN cord-339886-th1da1bb 137 18 recent recent JJ cord-339886-th1da1bb 137 19 large large JJ cord-339886-th1da1bb 137 20 - - HYPH cord-339886-th1da1bb 137 21 scale scale NN cord-339886-th1da1bb 137 22 studies study NNS cord-339886-th1da1bb 137 23 revealing reveal VBG cord-339886-th1da1bb 137 24 184 184 CD cord-339886-th1da1bb 137 25 new new JJ cord-339886-th1da1bb 137 26 viruses virus NNS cord-339886-th1da1bb 137 27 sampled sample VBN cord-339886-th1da1bb 137 28 from from IN cord-339886-th1da1bb 137 29 macaque macaque NN cord-339886-th1da1bb 137 30 faeces faece NNS cord-339886-th1da1bb 137 31 in in IN cord-339886-th1da1bb 137 32 a a DT cord-339886-th1da1bb 137 33 single single JJ cord-339886-th1da1bb 137 34 geographic geographic JJ cord-339886-th1da1bb 137 35 location location NN cord-339886-th1da1bb 137 36 63 63 CD cord-339886-th1da1bb 137 37 and and CC cord-339886-th1da1bb 137 38 1,445 1,445 CD cord-339886-th1da1bb 137 39 new new JJ cord-339886-th1da1bb 137 40 viruses virus NNS cord-339886-th1da1bb 137 41 discovered discover VBN cord-339886-th1da1bb 137 42 from from IN cord-339886-th1da1bb 137 43 RNA RNA NNP cord-339886-th1da1bb 137 44 transcriptomic transcriptomic JJ cord-339886-th1da1bb 137 45 analyses analysis NNS cord-339886-th1da1bb 137 46 of of IN cord-339886-th1da1bb 137 47 multiple multiple JJ cord-339886-th1da1bb 137 48 invertebrate invertebrate JJ cord-339886-th1da1bb 137 49 species specie NNS cord-339886-th1da1bb 137 50 64 64 CD cord-339886-th1da1bb 137 51 . . . cord-339886-th1da1bb 138 1 However however RB cord-339886-th1da1bb 138 2 , , , cord-339886-th1da1bb 138 3 understanding understanding NN cord-339886-th1da1bb 138 4 which which WDT cord-339886-th1da1bb 138 5 of of IN cord-339886-th1da1bb 138 6 these these DT cord-339886-th1da1bb 138 7 new new JJ cord-339886-th1da1bb 138 8 entities entity NNS cord-339886-th1da1bb 138 9 might may MD cord-339886-th1da1bb 138 10 pose pose VB cord-339886-th1da1bb 138 11 a a DT cord-339886-th1da1bb 138 12 threat threat NN cord-339886-th1da1bb 138 13 requires require VBZ cord-339886-th1da1bb 138 14 a a DT cord-339886-th1da1bb 138 15 new new JJ cord-339886-th1da1bb 138 16 approach approach NN cord-339886-th1da1bb 138 17 . . . cord-339886-th1da1bb 139 1 One one CD cord-339886-th1da1bb 139 2 Health Health NNP cord-339886-th1da1bb 139 3 . . . cord-339886-th1da1bb 140 1 The the DT cord-339886-th1da1bb 140 2 emergence emergence NN cord-339886-th1da1bb 140 3 of of IN cord-339886-th1da1bb 140 4 a a DT cord-339886-th1da1bb 140 5 zoonotic zoonotic JJ cord-339886-th1da1bb 140 6 pathogen pathogen NN cord-339886-th1da1bb 140 7 proceeds proceed NNS cord-339886-th1da1bb 140 8 in in IN cord-339886-th1da1bb 140 9 stages stage NNS cord-339886-th1da1bb 140 10 65 65 CD cord-339886-th1da1bb 141 1 ( ( -LRB- cord-339886-th1da1bb 141 2 FIG FIG NNP cord-339886-th1da1bb 141 3 . . . cord-339886-th1da1bb 141 4 4 4 LS cord-339886-th1da1bb 141 5 ) ) -RRB- cord-339886-th1da1bb 141 6 ; ; : cord-339886-th1da1bb 141 7 in in IN cord-339886-th1da1bb 141 8 an an DT cord-339886-th1da1bb 141 9 effort effort NN cord-339886-th1da1bb 141 10 to to TO cord-339886-th1da1bb 141 11 better well RBR cord-339886-th1da1bb 141 12 anticipate anticipate VB cord-339886-th1da1bb 141 13 these these DT cord-339886-th1da1bb 141 14 transitions transition NNS cord-339886-th1da1bb 141 15 and and CC cord-339886-th1da1bb 141 16 more more RBR cord-339886-th1da1bb 141 17 proactively proactively RB cord-339886-th1da1bb 141 18 respond respond VB cord-339886-th1da1bb 141 19 to to IN cord-339886-th1da1bb 141 20 emerging emerge VBG cord-339886-th1da1bb 141 21 threats threat NNS cord-339886-th1da1bb 141 22 , , , cord-339886-th1da1bb 141 23 the the DT cord-339886-th1da1bb 141 24 One One NNP cord-339886-th1da1bb 141 25 Health Health NNP cord-339886-th1da1bb 141 26 movement movement NN cord-339886-th1da1bb 141 27 was be VBD cord-339886-th1da1bb 141 28 launched launch VBN cord-339886-th1da1bb 141 29 in in IN cord-339886-th1da1bb 141 30 2004 2004 CD cord-339886-th1da1bb 141 31 . . . cord-339886-th1da1bb 142 1 Recognizing recognize VBG cord-339886-th1da1bb 142 2 that that DT cord-339886-th1da1bb 142 3 human human JJ cord-339886-th1da1bb 142 4 , , , cord-339886-th1da1bb 142 5 domestic domestic JJ cord-339886-th1da1bb 142 6 animal animal NN cord-339886-th1da1bb 142 7 and and CC cord-339886-th1da1bb 142 8 wildlife wildlife NN cord-339886-th1da1bb 142 9 health health NN cord-339886-th1da1bb 142 10 and and CC cord-339886-th1da1bb 142 11 disease disease NN cord-339886-th1da1bb 142 12 are be VBP cord-339886-th1da1bb 142 13 linked link VBN cord-339886-th1da1bb 142 14 to to IN cord-339886-th1da1bb 142 15 each each DT cord-339886-th1da1bb 142 16 other other JJ cord-339886-th1da1bb 142 17 and and CC cord-339886-th1da1bb 142 18 that that IN cord-339886-th1da1bb 142 19 changing change VBG cord-339886-th1da1bb 142 20 land land NN cord-339886-th1da1bb 142 21 - - HYPH cord-339886-th1da1bb 142 22 use use NN cord-339886-th1da1bb 142 23 patterns pattern NNS cord-339886-th1da1bb 142 24 contribute contribute VBP cord-339886-th1da1bb 142 25 to to IN cord-339886-th1da1bb 142 26 disease disease NN cord-339886-th1da1bb 142 27 spread spread VB cord-339886-th1da1bb 142 28 , , , cord-339886-th1da1bb 142 29 One one CD cord-339886-th1da1bb 142 30 Health Health NNP cord-339886-th1da1bb 142 31 aims aim VBZ cord-339886-th1da1bb 142 32 to to TO cord-339886-th1da1bb 142 33 develop develop VB cord-339886-th1da1bb 142 34 systems system NNS cord-339886-th1da1bb 142 35 - - HYPH cord-339886-th1da1bb 142 36 minded minded JJ cord-339886-th1da1bb 142 37 , , , cord-339886-th1da1bb 142 38 forward forward RB cord-339886-th1da1bb 142 39 - - HYPH cord-339886-th1da1bb 142 40 thinking think VBG cord-339886-th1da1bb 142 41 approaches approach NNS cord-339886-th1da1bb 142 42 to to IN cord-339886-th1da1bb 142 43 disease disease NN cord-339886-th1da1bb 142 44 surveillance surveillance NN cord-339886-th1da1bb 142 45 , , , cord-339886-th1da1bb 142 46 control control NN cord-339886-th1da1bb 142 47 and and CC cord-339886-th1da1bb 142 48 prevention prevention NN cord-339886-th1da1bb 142 49 66 66 CD cord-339886-th1da1bb 142 50 . . . cord-339886-th1da1bb 143 1 By by IN cord-339886-th1da1bb 143 2 investing invest VBG cord-339886-th1da1bb 143 3 in in IN cord-339886-th1da1bb 143 4 infrastructure infrastructure NN cord-339886-th1da1bb 143 5 for for IN cord-339886-th1da1bb 143 6 human human JJ cord-339886-th1da1bb 143 7 and and CC cord-339886-th1da1bb 143 8 animal animal NN cord-339886-th1da1bb 143 9 health health NN cord-339886-th1da1bb 143 10 surveillance surveillance NN cord-339886-th1da1bb 143 11 , , , cord-339886-th1da1bb 143 12 committing commit VBG cord-339886-th1da1bb 143 13 to to IN cord-339886-th1da1bb 143 14 timely timely JJ cord-339886-th1da1bb 143 15 information information NN cord-339886-th1da1bb 143 16 sharing sharing NN cord-339886-th1da1bb 143 17 and and CC cord-339886-th1da1bb 143 18 establishing establish VBG cord-339886-th1da1bb 143 19 collaborations collaboration NNS cord-339886-th1da1bb 143 20 across across IN cord-339886-th1da1bb 143 21 multiple multiple JJ cord-339886-th1da1bb 143 22 sectors sector NNS cord-339886-th1da1bb 143 23 and and CC cord-339886-th1da1bb 143 24 disciplines discipline NNS cord-339886-th1da1bb 143 25 , , , cord-339886-th1da1bb 143 26 the the DT cord-339886-th1da1bb 143 27 goal goal NN cord-339886-th1da1bb 143 28 of of IN cord-339886-th1da1bb 143 29 the the DT cord-339886-th1da1bb 143 30 One One NNP cord-339886-th1da1bb 143 31 Health Health NNP cord-339886-th1da1bb 143 32 community community NN cord-339886-th1da1bb 143 33 is be VBZ cord-339886-th1da1bb 143 34 an an DT cord-339886-th1da1bb 143 35 integrated integrated JJ cord-339886-th1da1bb 143 36 system system NN cord-339886-th1da1bb 143 37 incorporating incorporate VBG cord-339886-th1da1bb 143 38 human human JJ cord-339886-th1da1bb 143 39 , , , cord-339886-th1da1bb 143 40 animal animal NN cord-339886-th1da1bb 143 41 and and CC cord-339886-th1da1bb 143 42 environmental environmental JJ cord-339886-th1da1bb 143 43 surveillance surveillance NN cord-339886-th1da1bb 143 44 -a -a HYPH cord-339886-th1da1bb 143 45 goal goal NN cord-339886-th1da1bb 143 46 in in IN cord-339886-th1da1bb 143 47 which which WDT cord-339886-th1da1bb 143 48 genomics genomic NNS cord-339886-th1da1bb 143 49 can can MD cord-339886-th1da1bb 143 50 have have VB cord-339886-th1da1bb 143 51 an an DT cord-339886-th1da1bb 143 52 important important JJ cord-339886-th1da1bb 143 53 role role NN cord-339886-th1da1bb 143 54 . . . cord-339886-th1da1bb 144 1 The the DT cord-339886-th1da1bb 144 2 One One NNP cord-339886-th1da1bb 144 3 Health Health NNP cord-339886-th1da1bb 144 4 approach approach NN cord-339886-th1da1bb 144 5 has have VBZ cord-339886-th1da1bb 144 6 been be VBN cord-339886-th1da1bb 144 7 implemented implement VBN cord-339886-th1da1bb 144 8 through through IN cord-339886-th1da1bb 144 9 the the DT cord-339886-th1da1bb 144 10 PREDICT PREDICT NNP cord-339886-th1da1bb 144 11 project project NN cord-339886-th1da1bb 144 12 , , , cord-339886-th1da1bb 144 13 which which WDT cord-339886-th1da1bb 144 14 is be VBZ cord-339886-th1da1bb 144 15 part part NN cord-339886-th1da1bb 144 16 of of IN cord-339886-th1da1bb 144 17 the the DT cord-339886-th1da1bb 144 18 Emerging Emerging NNP cord-339886-th1da1bb 144 19 Pandemic Pandemic NNP cord-339886-th1da1bb 144 20 Threats Threats NNPS cord-339886-th1da1bb 144 21 ( ( -LRB- cord-339886-th1da1bb 144 22 EPT EPT NNP cord-339886-th1da1bb 144 23 ) ) -RRB- cord-339886-th1da1bb 144 24 programme programme NN cord-339886-th1da1bb 144 25 of of IN cord-339886-th1da1bb 144 26 the the DT cord-339886-th1da1bb 144 27 US US NNP cord-339886-th1da1bb 144 28 Agency Agency NNP cord-339886-th1da1bb 144 29 for for IN cord-339886-th1da1bb 144 30 International International NNP cord-339886-th1da1bb 144 31 Development Development NNP cord-339886-th1da1bb 144 32 ( ( -LRB- cord-339886-th1da1bb 144 33 USAID USAID NNP cord-339886-th1da1bb 144 34 ) ) -RRB- cord-339886-th1da1bb 144 35 . . . cord-339886-th1da1bb 145 1 PREDICT predict VB cord-339886-th1da1bb 145 2 explores explore VBZ cord-339886-th1da1bb 145 3 the the DT cord-339886-th1da1bb 145 4 spillover spillover NN cord-339886-th1da1bb 145 5 of of IN cord-339886-th1da1bb 145 6 selected select VBN cord-339886-th1da1bb 145 7 viral viral JJ cord-339886-th1da1bb 145 8 zoonoses zoonosis NNS cord-339886-th1da1bb 145 9 from from IN cord-339886-th1da1bb 145 10 particular particular JJ cord-339886-th1da1bb 145 11 wildlife wildlife NN cord-339886-th1da1bb 145 12 taxa taxon NNS cord-339886-th1da1bb 145 13 67 67 CD cord-339886-th1da1bb 145 14 , , , cord-339886-th1da1bb 145 15 and and CC cord-339886-th1da1bb 145 16 early early JJ cord-339886-th1da1bb 145 17 efforts effort NNS cord-339886-th1da1bb 145 18 have have VBP cord-339886-th1da1bb 145 19 focused focus VBN cord-339886-th1da1bb 145 20 on on IN cord-339886-th1da1bb 145 21 developing develop VBG cord-339886-th1da1bb 145 22 non non JJ cord-339886-th1da1bb 145 23 - - JJ cord-339886-th1da1bb 145 24 invasive invasive JJ cord-339886-th1da1bb 145 25 sampling sampling NN cord-339886-th1da1bb 145 26 techniques technique NNS cord-339886-th1da1bb 145 27 for for IN cord-339886-th1da1bb 145 28 wildlife wildlife NN cord-339886-th1da1bb 145 29 68 68 CD cord-339886-th1da1bb 145 30 , , , cord-339886-th1da1bb 145 31 estimating estimate VBG cord-339886-th1da1bb 145 32 the the DT cord-339886-th1da1bb 145 33 breadth breadth NN cord-339886-th1da1bb 145 34 of of IN cord-339886-th1da1bb 145 35 mammalian mammalian JJ cord-339886-th1da1bb 145 36 viral viral JJ cord-339886-th1da1bb 145 37 diversity diversity NN cord-339886-th1da1bb 145 38 across across IN cord-339886-th1da1bb 145 39 nine nine CD cord-339886-th1da1bb 145 40 viral viral JJ cord-339886-th1da1bb 145 41 families family NNS cord-339886-th1da1bb 145 42 and and CC cord-339886-th1da1bb 145 43 at at IN cord-339886-th1da1bb 145 44 least least JJS cord-339886-th1da1bb 145 45 320,000 320,000 CD cord-339886-th1da1bb 145 46 undiscovered undiscovered JJ cord-339886-th1da1bb 145 47 species specie NNS cord-339886-th1da1bb 145 48 69 69 CD cord-339886-th1da1bb 145 49 and and CC cord-339886-th1da1bb 145 50 demonstrating demonstrate VBG cord-339886-th1da1bb 145 51 that that IN cord-339886-th1da1bb 145 52 viral viral JJ cord-339886-th1da1bb 145 53 community community NN cord-339886-th1da1bb 145 54 diversity diversity NN cord-339886-th1da1bb 145 55 is be VBZ cord-339886-th1da1bb 145 56 at at IN cord-339886-th1da1bb 145 57 least least JJS cord-339886-th1da1bb 145 58 a a DT cord-339886-th1da1bb 145 59 partially partially RB cord-339886-th1da1bb 145 60 deterministic deterministic JJ cord-339886-th1da1bb 145 61 process process NN cord-339886-th1da1bb 145 62 , , , cord-339886-th1da1bb 145 63 suggesting suggest VBG cord-339886-th1da1bb 145 64 that that IN cord-339886-th1da1bb 145 65 forecasting forecast VBG cord-339886-th1da1bb 145 66 community community NN cord-339886-th1da1bb 145 67 changes change NNS cord-339886-th1da1bb 145 68 , , , cord-339886-th1da1bb 145 69 which which WDT cord-339886-th1da1bb 145 70 potentially potentially RB cord-339886-th1da1bb 145 71 signal signal VBP cord-339886-th1da1bb 145 72 spillover spillover NN cord-339886-th1da1bb 145 73 , , , cord-339886-th1da1bb 145 74 is be VBZ cord-339886-th1da1bb 145 75 a a DT cord-339886-th1da1bb 145 76 possibility possibility NN cord-339886-th1da1bb 145 77 63 63 CD cord-339886-th1da1bb 145 78 . . . cord-339886-th1da1bb 146 1 Although although IN cord-339886-th1da1bb 146 2 the the DT cord-339886-th1da1bb 146 3 goal goal NN cord-339886-th1da1bb 146 4 of of IN cord-339886-th1da1bb 146 5 using use VBG cord-339886-th1da1bb 146 6 integrated integrated JJ cord-339886-th1da1bb 146 7 surveillance surveillance NN cord-339886-th1da1bb 146 8 information information NN cord-339886-th1da1bb 146 9 to to TO cord-339886-th1da1bb 146 10 predict predict VB cord-339886-th1da1bb 146 11 an an DT cord-339886-th1da1bb 146 12 outbreak outbreak NN cord-339886-th1da1bb 146 13 is be VBZ cord-339886-th1da1bb 146 14 still still RB cord-339886-th1da1bb 146 15 many many JJ cord-339886-th1da1bb 146 16 years year NNS cord-339886-th1da1bb 146 17 away away RB cord-339886-th1da1bb 146 18 , , , cord-339886-th1da1bb 146 19 One one CD cord-339886-th1da1bb 146 20 Health Health NNP cord-339886-th1da1bb 146 21 studies study NNS cord-339886-th1da1bb 146 22 are be VBP cord-339886-th1da1bb 146 23 already already RB cord-339886-th1da1bb 146 24 leveraging leverage VBG cord-339886-th1da1bb 146 25 the the DT cord-339886-th1da1bb 146 26 tools tool NNS cord-339886-th1da1bb 146 27 and and CC cord-339886-th1da1bb 146 28 techniques technique NNS cord-339886-th1da1bb 146 29 of of IN cord-339886-th1da1bb 146 30 genomic genomic JJ cord-339886-th1da1bb 146 31 epidemiology epidemiology NN cord-339886-th1da1bb 146 32 to to TO cord-339886-th1da1bb 146 33 understand understand VB cord-339886-th1da1bb 146 34 current current JJ cord-339886-th1da1bb 146 35 outbreaks outbreak NNS cord-339886-th1da1bb 146 36 . . . cord-339886-th1da1bb 147 1 Combining combine VBG cord-339886-th1da1bb 147 2 genomic genomic JJ cord-339886-th1da1bb 147 3 data datum NNS cord-339886-th1da1bb 147 4 with with IN cord-339886-th1da1bb 147 5 data datum NNS cord-339886-th1da1bb 147 6 streams stream NNS cord-339886-th1da1bb 147 7 from from IN cord-339886-th1da1bb 147 8 enhanced enhance VBN cord-339886-th1da1bb 147 9 One one CD cord-339886-th1da1bb 147 10 Health Health NNP cord-339886-th1da1bb 147 11 surveillance surveillance NN cord-339886-th1da1bb 147 12 platforms platform NNS cord-339886-th1da1bb 147 13 presents present VBZ cord-339886-th1da1bb 147 14 an an DT cord-339886-th1da1bb 147 15 opportunity opportunity NN cord-339886-th1da1bb 147 16 to to TO cord-339886-th1da1bb 147 17 detect detect VB cord-339886-th1da1bb 147 18 the the DT cord-339886-th1da1bb 147 19 population population NN cord-339886-th1da1bb 147 20 expansions expansion NNS cord-339886-th1da1bb 147 21 Nature Nature NNP cord-339886-th1da1bb 147 22 Reviews Reviews NNPS cord-339886-th1da1bb 147 23 | | NNP cord-339886-th1da1bb 147 24 Genetics Genetics NNP cord-339886-th1da1bb 147 25 Figure Figure NNP cord-339886-th1da1bb 147 26 3 3 CD cord-339886-th1da1bb 147 27 | | NNS cord-339886-th1da1bb 148 1 Inferring infer VBG cord-339886-th1da1bb 148 2 transmission transmission NN cord-339886-th1da1bb 148 3 events event NNS cord-339886-th1da1bb 148 4 from from IN cord-339886-th1da1bb 148 5 genomic genomic JJ cord-339886-th1da1bb 148 6 data datum NNS cord-339886-th1da1bb 148 7 . . . cord-339886-th1da1bb 149 1 Genomic genomic JJ cord-339886-th1da1bb 149 2 approaches approach NNS cord-339886-th1da1bb 149 3 to to IN cord-339886-th1da1bb 149 4 identifying identify VBG cord-339886-th1da1bb 149 5 transmission transmission NN cord-339886-th1da1bb 149 6 events event NNS cord-339886-th1da1bb 149 7 typically typically RB cord-339886-th1da1bb 149 8 involve involve VBP cord-339886-th1da1bb 149 9 four four CD cord-339886-th1da1bb 149 10 steps step NNS cord-339886-th1da1bb 149 11 . . . cord-339886-th1da1bb 150 1 In in IN cord-339886-th1da1bb 150 2 the the DT cord-339886-th1da1bb 150 3 first first JJ cord-339886-th1da1bb 150 4 step step NN cord-339886-th1da1bb 150 5 , , , cord-339886-th1da1bb 150 6 outbreak outbreak NN cord-339886-th1da1bb 150 7 isolates isolate NNS cord-339886-th1da1bb 150 8 , , , cord-339886-th1da1bb 150 9 and and CC cord-339886-th1da1bb 150 10 often often RB cord-339886-th1da1bb 150 11 non non JJ cord-339886-th1da1bb 150 12 - - JJ cord-339886-th1da1bb 150 13 outbreak outbreak JJ cord-339886-th1da1bb 150 14 control control NN cord-339886-th1da1bb 150 15 isolates isolate NNS cord-339886-th1da1bb 150 16 , , , cord-339886-th1da1bb 150 17 are be VBP cord-339886-th1da1bb 150 18 sequenced sequence VBN cord-339886-th1da1bb 150 19 and and CC cord-339886-th1da1bb 150 20 their -PRON- PRP$ cord-339886-th1da1bb 150 21 genomes genome NNS cord-339886-th1da1bb 150 22 either either CC cord-339886-th1da1bb 150 23 assembled assemble VBN cord-339886-th1da1bb 150 24 de de FW cord-339886-th1da1bb 150 25 novo novo NNP cord-339886-th1da1bb 150 26 or or CC cord-339886-th1da1bb 150 27 mapped map VBN cord-339886-th1da1bb 150 28 against against IN cord-339886-th1da1bb 150 29 a a DT cord-339886-th1da1bb 150 30 reference reference NN cord-339886-th1da1bb 150 31 genome genome NN cord-339886-th1da1bb 150 32 . . . cord-339886-th1da1bb 151 1 Next next RB cord-339886-th1da1bb 151 2 , , , cord-339886-th1da1bb 151 3 the the DT cord-339886-th1da1bb 151 4 genomic genomic JJ cord-339886-th1da1bb 151 5 differences difference NNS cord-339886-th1da1bb 151 6 between between IN cord-339886-th1da1bb 151 7 the the DT cord-339886-th1da1bb 151 8 sequences sequence NNS cord-339886-th1da1bb 151 9 are be VBP cord-339886-th1da1bb 151 10 identified identify VBN cord-339886-th1da1bb 151 11 -depending -depende VBG cord-339886-th1da1bb 151 12 on on IN cord-339886-th1da1bb 151 13 the the DT cord-339886-th1da1bb 151 14 pathogen pathogen NN cord-339886-th1da1bb 151 15 and and CC cord-339886-th1da1bb 151 16 the the DT cord-339886-th1da1bb 151 17 scale scale NN cord-339886-th1da1bb 151 18 of of IN cord-339886-th1da1bb 151 19 the the DT cord-339886-th1da1bb 151 20 outbreak outbreak NN cord-339886-th1da1bb 151 21 , , , cord-339886-th1da1bb 151 22 these these DT cord-339886-th1da1bb 151 23 may may MD cord-339886-th1da1bb 151 24 include include VB cord-339886-th1da1bb 151 25 features feature NNS cord-339886-th1da1bb 151 26 such such JJ cord-339886-th1da1bb 151 27 as as IN cord-339886-th1da1bb 151 28 genetic genetic JJ cord-339886-th1da1bb 151 29 variants variant NNS cord-339886-th1da1bb 151 30 , , , cord-339886-th1da1bb 151 31 insertions insertion NNS cord-339886-th1da1bb 151 32 and and CC cord-339886-th1da1bb 151 33 deletions deletion NNS cord-339886-th1da1bb 151 34 or or CC cord-339886-th1da1bb 151 35 the the DT cord-339886-th1da1bb 151 36 presence presence NN cord-339886-th1da1bb 151 37 or or CC cord-339886-th1da1bb 151 38 absence absence NN cord-339886-th1da1bb 151 39 of of IN cord-339886-th1da1bb 151 40 specific specific JJ cord-339886-th1da1bb 151 41 genes gene NNS cord-339886-th1da1bb 151 42 or or CC cord-339886-th1da1bb 151 43 mobile mobile JJ cord-339886-th1da1bb 151 44 genetic genetic JJ cord-339886-th1da1bb 151 45 elements element NNS cord-339886-th1da1bb 151 46 . . . cord-339886-th1da1bb 152 1 In in IN cord-339886-th1da1bb 152 2 the the DT cord-339886-th1da1bb 152 3 third third JJ cord-339886-th1da1bb 152 4 step step NN cord-339886-th1da1bb 152 5 , , , cord-339886-th1da1bb 152 6 these these DT cord-339886-th1da1bb 152 7 features feature NNS cord-339886-th1da1bb 152 8 are be VBP cord-339886-th1da1bb 152 9 examined examine VBN cord-339886-th1da1bb 152 10 to to TO cord-339886-th1da1bb 152 11 infer infer VB cord-339886-th1da1bb 152 12 the the DT cord-339886-th1da1bb 152 13 relationships relationship NNS cord-339886-th1da1bb 152 14 between between IN cord-339886-th1da1bb 152 15 the the DT cord-339886-th1da1bb 152 16 isolates isolate NNS cord-339886-th1da1bb 152 17 from from IN cord-339886-th1da1bb 152 18 whence whence IN cord-339886-th1da1bb 152 19 they -PRON- PRP cord-339886-th1da1bb 152 20 came come VBD cord-339886-th1da1bb 152 21 -a -a . cord-339886-th1da1bb 153 1 variant variant JJ cord-339886-th1da1bb 153 2 common common JJ cord-339886-th1da1bb 153 3 to to IN cord-339886-th1da1bb 153 4 a a DT cord-339886-th1da1bb 153 5 subset subset NN cord-339886-th1da1bb 153 6 of of IN cord-339886-th1da1bb 153 7 isolates isolate NNS cord-339886-th1da1bb 153 8 , , , cord-339886-th1da1bb 153 9 for for IN cord-339886-th1da1bb 153 10 example example NN cord-339886-th1da1bb 153 11 , , , cord-339886-th1da1bb 153 12 suggests suggest VBZ cord-339886-th1da1bb 153 13 that that IN cord-339886-th1da1bb 153 14 those those DT cord-339886-th1da1bb 153 15 cases case NNS cord-339886-th1da1bb 153 16 are be VBP cord-339886-th1da1bb 153 17 epidemiologically epidemiologically RB cord-339886-th1da1bb 153 18 linked link VBN cord-339886-th1da1bb 153 19 . . . cord-339886-th1da1bb 154 1 Finally finally RB cord-339886-th1da1bb 154 2 , , , cord-339886-th1da1bb 154 3 the the DT cord-339886-th1da1bb 154 4 genomic genomic JJ cord-339886-th1da1bb 154 5 evidence evidence NN cord-339886-th1da1bb 154 6 for for IN cord-339886-th1da1bb 154 7 epidemiological epidemiological JJ cord-339886-th1da1bb 154 8 linkages linkage NNS cord-339886-th1da1bb 154 9 is be VBZ cord-339886-th1da1bb 154 10 reviewed review VBN cord-339886-th1da1bb 154 11 in in IN cord-339886-th1da1bb 154 12 the the DT cord-339886-th1da1bb 154 13 context context NN cord-339886-th1da1bb 154 14 of of IN cord-339886-th1da1bb 154 15 known know VBN cord-339886-th1da1bb 154 16 epidemiological epidemiological JJ cord-339886-th1da1bb 154 17 information information NN cord-339886-th1da1bb 154 18 , , , cord-339886-th1da1bb 154 19 such such JJ cord-339886-th1da1bb 154 20 as as IN cord-339886-th1da1bb 154 21 social social JJ cord-339886-th1da1bb 154 22 contact contact NN cord-339886-th1da1bb 154 23 between between IN cord-339886-th1da1bb 154 24 two two CD cord-339886-th1da1bb 154 25 cases case NNS cord-339886-th1da1bb 154 26 or or CC cord-339886-th1da1bb 154 27 a a DT cord-339886-th1da1bb 154 28 common common JJ cord-339886-th1da1bb 154 29 location location NN cord-339886-th1da1bb 154 30 or or CC cord-339886-th1da1bb 154 31 other other JJ cord-339886-th1da1bb 154 32 exposure exposure NN cord-339886-th1da1bb 154 33 . . . cord-339886-th1da1bb 155 1 Recently recently RB cord-339886-th1da1bb 155 2 , , , cord-339886-th1da1bb 155 3 automated automate VBN cord-339886-th1da1bb 155 4 methods method NNS cord-339886-th1da1bb 155 5 for for IN cord-339886-th1da1bb 155 6 inferring infer VBG cord-339886-th1da1bb 155 7 potential potential JJ cord-339886-th1da1bb 155 8 epidemiological epidemiological JJ cord-339886-th1da1bb 155 9 linkages linkage NNS cord-339886-th1da1bb 155 10 from from IN cord-339886-th1da1bb 155 11 genomic genomic JJ cord-339886-th1da1bb 155 12 data datum NNS cord-339886-th1da1bb 155 13 alone alone RB cord-339886-th1da1bb 155 14 have have VBP cord-339886-th1da1bb 155 15 been be VBN cord-339886-th1da1bb 155 16 developed develop VBN cord-339886-th1da1bb 155 17 , , , cord-339886-th1da1bb 155 18 greatly greatly RB cord-339886-th1da1bb 155 19 facilitating facilitate VBG cord-339886-th1da1bb 155 20 large large JJ cord-339886-th1da1bb 155 21 - - HYPH cord-339886-th1da1bb 155 22 scale scale NN cord-339886-th1da1bb 155 23 genomic genomic JJ cord-339886-th1da1bb 155 24 epidemiological epidemiological JJ cord-339886-th1da1bb 155 25 investigations investigation NNS cord-339886-th1da1bb 155 26 121 121 CD cord-339886-th1da1bb 155 27 . . . cord-339886-th1da1bb 156 1 and/or and/or CC cord-339886-th1da1bb 156 2 cross cross JJ cord-339886-th1da1bb 156 3 - - JJ cord-339886-th1da1bb 156 4 species species JJ cord-339886-th1da1bb 156 5 transmissions transmission NNS cord-339886-th1da1bb 156 6 that that WDT cord-339886-th1da1bb 156 7 may may MD cord-339886-th1da1bb 156 8 precede precede VB cord-339886-th1da1bb 156 9 a a DT cord-339886-th1da1bb 156 10 human human JJ cord-339886-th1da1bb 156 11 health health NN cord-339886-th1da1bb 156 12 event event NN cord-339886-th1da1bb 156 13 . . . cord-339886-th1da1bb 157 1 For for IN cord-339886-th1da1bb 157 2 example example NN cord-339886-th1da1bb 157 3 , , , cord-339886-th1da1bb 157 4 genome genome NN cord-339886-th1da1bb 157 5 sequences sequence NNS cord-339886-th1da1bb 157 6 from from IN cord-339886-th1da1bb 157 7 a a DT cord-339886-th1da1bb 157 8 raccoon raccoon NN cord-339886-th1da1bb 157 9 - - HYPH cord-339886-th1da1bb 157 10 associated associate VBN cord-339886-th1da1bb 157 11 variant variant NN cord-339886-th1da1bb 157 12 of of IN cord-339886-th1da1bb 157 13 rabies rabies NN cord-339886-th1da1bb 157 14 virus virus NN cord-339886-th1da1bb 157 15 ( ( -LRB- cord-339886-th1da1bb 157 16 RRV RRV NNP cord-339886-th1da1bb 157 17 ) ) -RRB- cord-339886-th1da1bb 157 18 , , , cord-339886-th1da1bb 157 19 when when WRB cord-339886-th1da1bb 157 20 paired pair VBN cord-339886-th1da1bb 157 21 with with IN cord-339886-th1da1bb 157 22 fine fine JJ cord-339886-th1da1bb 157 23 - - HYPH cord-339886-th1da1bb 157 24 scale scale NN cord-339886-th1da1bb 157 25 geographic geographic JJ cord-339886-th1da1bb 157 26 information information NN cord-339886-th1da1bb 157 27 and and CC cord-339886-th1da1bb 157 28 data datum NNS cord-339886-th1da1bb 157 29 from from IN cord-339886-th1da1bb 157 30 Canadian Canadian NNP cord-339886-th1da1bb 157 31 and and CC cord-339886-th1da1bb 157 32 US US NNP cord-339886-th1da1bb 157 33 wildlife wildlife NN cord-339886-th1da1bb 157 34 rabies rabies NN cord-339886-th1da1bb 157 35 vaccination vaccination NN cord-339886-th1da1bb 157 36 programmes programme NNS cord-339886-th1da1bb 157 37 , , , cord-339886-th1da1bb 157 38 demonstrated demonstrate VBD cord-339886-th1da1bb 157 39 that that IN cord-339886-th1da1bb 157 40 multiple multiple JJ cord-339886-th1da1bb 157 41 cross cross JJ cord-339886-th1da1bb 157 42 - - JJ cord-339886-th1da1bb 157 43 border border JJ cord-339886-th1da1bb 157 44 incursions incursion NNS cord-339886-th1da1bb 157 45 were be VBD cord-339886-th1da1bb 157 46 responsible responsible JJ cord-339886-th1da1bb 157 47 for for IN cord-339886-th1da1bb 157 48 the the DT cord-339886-th1da1bb 157 49 expansion expansion NN cord-339886-th1da1bb 157 50 of of IN cord-339886-th1da1bb 157 51 RRV RRV NNP cord-339886-th1da1bb 157 52 into into IN cord-339886-th1da1bb 157 53 Canada Canada NNP cord-339886-th1da1bb 157 54 and and CC cord-339886-th1da1bb 157 55 sustained sustain VBN cord-339886-th1da1bb 157 56 outbreaks outbreak NNS cord-339886-th1da1bb 157 57 in in IN cord-339886-th1da1bb 157 58 several several JJ cord-339886-th1da1bb 157 59 provinces province NNS cord-339886-th1da1bb 157 60 70 70 CD cord-339886-th1da1bb 157 61 ; ; : cord-339886-th1da1bb 157 62 this this DT cord-339886-th1da1bb 157 63 finding finding NN cord-339886-th1da1bb 157 64 led lead VBD cord-339886-th1da1bb 157 65 to to IN cord-339886-th1da1bb 157 66 renewed renew VBN cord-339886-th1da1bb 157 67 concern concern NN cord-339886-th1da1bb 157 68 about about IN cord-339886-th1da1bb 157 69 and and CC cord-339886-th1da1bb 157 70 action action NN cord-339886-th1da1bb 157 71 against against IN cord-339886-th1da1bb 157 72 rabies rabie NNS cord-339886-th1da1bb 157 73 on on IN cord-339886-th1da1bb 157 74 the the DT cord-339886-th1da1bb 157 75 part part NN cord-339886-th1da1bb 157 76 of of IN cord-339886-th1da1bb 157 77 public public JJ cord-339886-th1da1bb 157 78 health health NN cord-339886-th1da1bb 157 79 authorities authority NNS cord-339886-th1da1bb 157 80 71 71 CD cord-339886-th1da1bb 157 81 . . . cord-339886-th1da1bb 158 1 One one CD cord-339886-th1da1bb 158 2 of of IN cord-339886-th1da1bb 158 3 the the DT cord-339886-th1da1bb 158 4 first first JJ cord-339886-th1da1bb 158 5 studies study NNS cord-339886-th1da1bb 158 6 coupling couple VBG cord-339886-th1da1bb 158 7 detailed detail VBN cord-339886-th1da1bb 158 8 wildlife wildlife NN cord-339886-th1da1bb 158 9 and and CC cord-339886-th1da1bb 158 10 livestock livestock NN cord-339886-th1da1bb 158 11 movement movement NN cord-339886-th1da1bb 158 12 data datum NNS cord-339886-th1da1bb 158 13 with with IN cord-339886-th1da1bb 158 14 phylodynamic phylodynamic NNP cord-339886-th1da1bb 158 15 analysis analysis NN cord-339886-th1da1bb 158 16 of of IN cord-339886-th1da1bb 158 17 a a DT cord-339886-th1da1bb 158 18 bacterial bacterial JJ cord-339886-th1da1bb 158 19 pathogen pathogen NN cord-339886-th1da1bb 158 20 revealed reveal VBD cord-339886-th1da1bb 158 21 that that IN cord-339886-th1da1bb 158 22 crossspecies crossspecies NNP cord-339886-th1da1bb 158 23 jumps jump VBZ cord-339886-th1da1bb 158 24 from from IN cord-339886-th1da1bb 158 25 an an DT cord-339886-th1da1bb 158 26 elk elk NN cord-339886-th1da1bb 158 27 reservoir reservoir NN cord-339886-th1da1bb 158 28 were be VBD cord-339886-th1da1bb 158 29 the the DT cord-339886-th1da1bb 158 30 source source NN cord-339886-th1da1bb 158 31 of of IN cord-339886-th1da1bb 158 32 increasing increase VBG cord-339886-th1da1bb 158 33 rates rate NNS cord-339886-th1da1bb 158 34 of of IN cord-339886-th1da1bb 158 35 Brucella Brucella NNP cord-339886-th1da1bb 158 36 abortus abortus NN cord-339886-th1da1bb 158 37 infections infection NNS cord-339886-th1da1bb 158 38 in in IN cord-339886-th1da1bb 158 39 nearby nearby JJ cord-339886-th1da1bb 158 40 livestock livestock NN cord-339886-th1da1bb 158 41 72 72 CD cord-339886-th1da1bb 158 42 ; ; : cord-339886-th1da1bb 158 43 as as IN cord-339886-th1da1bb 158 44 the the DT cord-339886-th1da1bb 158 45 most most RBS cord-339886-th1da1bb 158 46 common common JJ cord-339886-th1da1bb 158 47 zoonosis zoonosis NN cord-339886-th1da1bb 158 48 of of IN cord-339886-th1da1bb 158 49 humans human NNS cord-339886-th1da1bb 158 50 , , , cord-339886-th1da1bb 158 51 brucellosis brucellosis NN cord-339886-th1da1bb 158 52 control control NN cord-339886-th1da1bb 158 53 programmes programme NNS cord-339886-th1da1bb 158 54 will will MD cord-339886-th1da1bb 158 55 benefit benefit VB cord-339886-th1da1bb 158 56 substantially substantially RB cord-339886-th1da1bb 158 57 from from IN cord-339886-th1da1bb 158 58 this this DT cord-339886-th1da1bb 158 59 sort sort NN cord-339886-th1da1bb 158 60 of of IN cord-339886-th1da1bb 158 61 One One NNP cord-339886-th1da1bb 158 62 Health Health NNP cord-339886-th1da1bb 158 63 approach approach NN cord-339886-th1da1bb 158 64 73 73 CD cord-339886-th1da1bb 158 65 . . . cord-339886-th1da1bb 159 1 This this DT cord-339886-th1da1bb 159 2 model model NN cord-339886-th1da1bb 159 3 , , , cord-339886-th1da1bb 159 4 in in IN cord-339886-th1da1bb 159 5 which which WDT cord-339886-th1da1bb 159 6 diagnostic diagnostic JJ cord-339886-th1da1bb 159 7 testing testing NN cord-339886-th1da1bb 159 8 in in IN cord-339886-th1da1bb 159 9 reference reference NN cord-339886-th1da1bb 159 10 laboratories laboratory NNS cord-339886-th1da1bb 159 11 triggers trigger VBZ cord-339886-th1da1bb 159 12 genomic genomic JJ cord-339886-th1da1bb 159 13 follow follow NN cord-339886-th1da1bb 159 14 - - HYPH cord-339886-th1da1bb 159 15 up up NN cord-339886-th1da1bb 159 16 , , , cord-339886-th1da1bb 159 17 represents represent VBZ cord-339886-th1da1bb 159 18 an an DT cord-339886-th1da1bb 159 19 effective effective JJ cord-339886-th1da1bb 159 20 near near JJ cord-339886-th1da1bb 159 21 - - HYPH cord-339886-th1da1bb 159 22 term term NN cord-339886-th1da1bb 159 23 solution solution NN cord-339886-th1da1bb 159 24 for for IN cord-339886-th1da1bb 159 25 integrating integrate VBG cord-339886-th1da1bb 159 26 genomics genomic NNS cord-339886-th1da1bb 159 27 into into IN cord-339886-th1da1bb 159 28 One one CD cord-339886-th1da1bb 159 29 Health Health NNP cord-339886-th1da1bb 159 30 surveillance surveillance NN cord-339886-th1da1bb 159 31 efforts effort NNS cord-339886-th1da1bb 159 32 as as IN cord-339886-th1da1bb 159 33 the the DT cord-339886-th1da1bb 159 34 community community NN cord-339886-th1da1bb 159 35 explores explore VBZ cord-339886-th1da1bb 159 36 solutions solution NNS cord-339886-th1da1bb 159 37 to to IN cord-339886-th1da1bb 159 38 the the DT cord-339886-th1da1bb 159 39 many many JJ cord-339886-th1da1bb 159 40 challenges challenge NNS cord-339886-th1da1bb 159 41 facing face VBG cord-339886-th1da1bb 159 42 in in IN cord-339886-th1da1bb 159 43 situ situ JJ cord-339886-th1da1bb 159 44 clinical clinical JJ cord-339886-th1da1bb 159 45 metagenomics metagenomic NNS cord-339886-th1da1bb 159 46 surveillance surveillance NN cord-339886-th1da1bb 159 47 of of IN cord-339886-th1da1bb 159 48 animal animal NN cord-339886-th1da1bb 159 49 populations population NNS cord-339886-th1da1bb 159 50 ( ( -LRB- cord-339886-th1da1bb 159 51 reviewed review VBN cord-339886-th1da1bb 159 52 in in IN cord-339886-th1da1bb 159 53 REF REF NNP cord-339886-th1da1bb 159 54 . . . cord-339886-th1da1bb 159 55 74 74 CD cord-339886-th1da1bb 159 56 ) ) -RRB- cord-339886-th1da1bb 159 57 . . . cord-339886-th1da1bb 160 1 Initial initial JJ cord-339886-th1da1bb 160 2 forays foray NNS cord-339886-th1da1bb 160 3 into into IN cord-339886-th1da1bb 160 4 this this DT cord-339886-th1da1bb 160 5 area area NN cord-339886-th1da1bb 160 6 have have VBP cord-339886-th1da1bb 160 7 been be VBN cord-339886-th1da1bb 160 8 successful successful JJ cord-339886-th1da1bb 160 9 ; ; : cord-339886-th1da1bb 160 10 for for IN cord-339886-th1da1bb 160 11 example example NN cord-339886-th1da1bb 160 12 , , , cord-339886-th1da1bb 160 13 metagenomics metagenomic NNS cord-339886-th1da1bb 160 14 analysis analysis NN cord-339886-th1da1bb 160 15 of of IN cord-339886-th1da1bb 160 16 human human JJ cord-339886-th1da1bb 160 17 diarrhoeal diarrhoeal NN cord-339886-th1da1bb 160 18 specimens specimen NNS cord-339886-th1da1bb 160 19 and and CC cord-339886-th1da1bb 160 20 stools stool NNS cord-339886-th1da1bb 160 21 from from IN cord-339886-th1da1bb 160 22 nearby nearby JJ cord-339886-th1da1bb 160 23 pigs pig NNS cord-339886-th1da1bb 160 24 revealed reveal VBD cord-339886-th1da1bb 160 25 potential potential JJ cord-339886-th1da1bb 160 26 zoonotic zoonotic JJ cord-339886-th1da1bb 160 27 transmission transmission NN cord-339886-th1da1bb 160 28 of of IN cord-339886-th1da1bb 160 29 rotavirus rotavirus NN cord-339886-th1da1bb 160 30 75 75 CD cord-339886-th1da1bb 160 31 . . . cord-339886-th1da1bb 161 1 However however RB cord-339886-th1da1bb 161 2 , , , cord-339886-th1da1bb 161 3 metagenomic metagenomic NN cord-339886-th1da1bb 161 4 sequencing sequencing NN cord-339886-th1da1bb 161 5 across across IN cord-339886-th1da1bb 161 6 a a DT cord-339886-th1da1bb 161 7 range range NN cord-339886-th1da1bb 161 8 of of IN cord-339886-th1da1bb 161 9 animal animal NN cord-339886-th1da1bb 161 10 species specie NNS cord-339886-th1da1bb 161 11 and and CC cord-339886-th1da1bb 161 12 environments environment NNS cord-339886-th1da1bb 161 13 yields yield NNS cord-339886-th1da1bb 161 14 more more JJR cord-339886-th1da1bb 161 15 questions question NNS cord-339886-th1da1bb 161 16 than than IN cord-339886-th1da1bb 161 17 answers answer NNS cord-339886-th1da1bb 161 18 . . . cord-339886-th1da1bb 162 1 What what WP cord-339886-th1da1bb 162 2 is be VBZ cord-339886-th1da1bb 162 3 an an DT cord-339886-th1da1bb 162 4 early early JJ cord-339886-th1da1bb 162 5 signal signal NN cord-339886-th1da1bb 162 6 of of IN cord-339886-th1da1bb 162 7 patho patho FW cord-339886-th1da1bb 162 8 gen gen NN cord-339886-th1da1bb 162 9 emergence emergence NN cord-339886-th1da1bb 162 10 versus versus IN cord-339886-th1da1bb 162 11 background background NN cord-339886-th1da1bb 162 12 microbial microbial JJ cord-339886-th1da1bb 162 13 noise noise NN cord-339886-th1da1bb 162 14 65 65 CD cord-339886-th1da1bb 162 15 ? ? . cord-339886-th1da1bb 163 1 Which which WDT cord-339886-th1da1bb 163 2 emerging emerge VBG cord-339886-th1da1bb 163 3 agents agent NNS cord-339886-th1da1bb 163 4 are be VBP cord-339886-th1da1bb 163 5 capable capable JJ cord-339886-th1da1bb 163 6 of of IN cord-339886-th1da1bb 163 7 crossing cross VBG cord-339886-th1da1bb 163 8 the the DT cord-339886-th1da1bb 163 9 species specie NNS cord-339886-th1da1bb 163 10 barrier barrier NN cord-339886-th1da1bb 163 11 and and CC cord-339886-th1da1bb 163 12 causing cause VBG cord-339886-th1da1bb 163 13 human human JJ cord-339886-th1da1bb 163 14 disease disease NN cord-339886-th1da1bb 163 15 74 74 CD cord-339886-th1da1bb 163 16 ? ? . cord-339886-th1da1bb 164 1 What what WDT cord-339886-th1da1bb 164 2 degree degree NN cord-339886-th1da1bb 164 3 of of IN cord-339886-th1da1bb 164 4 sampling sampling NN cord-339886-th1da1bb 164 5 is be VBZ cord-339886-th1da1bb 164 6 required require VBN cord-339886-th1da1bb 164 7 to to TO cord-339886-th1da1bb 164 8 capture capture VB cord-339886-th1da1bb 164 9 potential potential JJ cord-339886-th1da1bb 164 10 spillovers spillover NNS cord-339886-th1da1bb 164 11 67 67 CD cord-339886-th1da1bb 164 12 ? ? . cord-339886-th1da1bb 165 1 Ultimately ultimately RB cord-339886-th1da1bb 165 2 , , , cord-339886-th1da1bb 165 3 a a DT cord-339886-th1da1bb 165 4 more more RBR cord-339886-th1da1bb 165 5 efficient efficient JJ cord-339886-th1da1bb 165 6 use use NN cord-339886-th1da1bb 165 7 of of IN cord-339886-th1da1bb 165 8 metagenomics metagenomic NNS cord-339886-th1da1bb 165 9 in in IN cord-339886-th1da1bb 165 10 a a DT cord-339886-th1da1bb 165 11 One one CD cord-339886-th1da1bb 165 12 Health Health NNP cord-339886-th1da1bb 165 13 surveillance surveillance NN cord-339886-th1da1bb 165 14 strategy strategy NN cord-339886-th1da1bb 165 15 might may MD cord-339886-th1da1bb 165 16 be be VB cord-339886-th1da1bb 165 17 scanning scan VBG cord-339886-th1da1bb 165 18 for for IN cord-339886-th1da1bb 165 19 zoonotic zoonotic NNP cord-339886-th1da1bb 165 20 ' ' `` cord-339886-th1da1bb 165 21 jumps jump NNS cord-339886-th1da1bb 165 22 ' ' '' cord-339886-th1da1bb 165 23 in in IN cord-339886-th1da1bb 165 24 selected select VBN cord-339886-th1da1bb 165 25 sentinel sentinel JJ cord-339886-th1da1bb 165 26 human human JJ cord-339886-th1da1bb 165 27 populations population NNS cord-339886-th1da1bb 165 28 rather rather RB cord-339886-th1da1bb 165 29 than than IN cord-339886-th1da1bb 165 30 a a DT cord-339886-th1da1bb 165 31 sweeping sweeping JJ cord-339886-th1da1bb 165 32 animal animal NN cord-339886-th1da1bb 165 33 surveillance surveillance NN cord-339886-th1da1bb 165 34 strategy strategy NN cord-339886-th1da1bb 165 35 62 62 CD cord-339886-th1da1bb 165 36 , , , cord-339886-th1da1bb 165 37 with with IN cord-339886-th1da1bb 165 38 sentinels sentinel NNS cord-339886-th1da1bb 165 39 chosen choose VBN cord-339886-th1da1bb 165 40 according accord VBG cord-339886-th1da1bb 165 41 to to IN cord-339886-th1da1bb 165 42 EID EID NNP cord-339886-th1da1bb 165 43 hotspot hotspot NN cord-339886-th1da1bb 165 44 maps map NNS cord-339886-th1da1bb 165 45 and and CC cord-339886-th1da1bb 165 46 other other JJ cord-339886-th1da1bb 165 47 factors factor NNS cord-339886-th1da1bb 165 48 65 65 CD cord-339886-th1da1bb 165 49 and and CC cord-339886-th1da1bb 165 50 interesting interesting JJ cord-339886-th1da1bb 165 51 genomic genomic JJ cord-339886-th1da1bb 165 52 signals signal NNS cord-339886-th1da1bb 165 53 triggering trigger VBG cord-339886-th1da1bb 165 54 follow follow VB cord-339886-th1da1bb 165 55 - - HYPH cord-339886-th1da1bb 165 56 up up NN cord-339886-th1da1bb 165 57 sequencing sequencing NN cord-339886-th1da1bb 165 58 in in IN cord-339886-th1da1bb 165 59 the the DT cord-339886-th1da1bb 165 60 relevant relevant JJ cord-339886-th1da1bb 165 61 animal animal NN cord-339886-th1da1bb 165 62 reser reser NNP cord-339886-th1da1bb 165 63 voirs voirs NNP cord-339886-th1da1bb 165 64 . . . cord-339886-th1da1bb 166 1 By by IN cord-339886-th1da1bb 166 2 combining combine VBG cord-339886-th1da1bb 166 3 genomic genomic JJ cord-339886-th1da1bb 166 4 data datum NNS cord-339886-th1da1bb 166 5 generated generate VBN cord-339886-th1da1bb 166 6 through through IN cord-339886-th1da1bb 166 7 these these DT cord-339886-th1da1bb 166 8 targeted target VBN cord-339886-th1da1bb 166 9 surveillance surveillance NN cord-339886-th1da1bb 166 10 efforts effort NNS cord-339886-th1da1bb 166 11 with with IN cord-339886-th1da1bb 166 12 phylodynamic phylodynamic JJ cord-339886-th1da1bb 166 13 approaches approach NNS cord-339886-th1da1bb 166 14 , , , cord-339886-th1da1bb 166 15 it -PRON- PRP cord-339886-th1da1bb 166 16 will will MD cord-339886-th1da1bb 166 17 be be VB cord-339886-th1da1bb 166 18 possible possible JJ cord-339886-th1da1bb 166 19 to to TO cord-339886-th1da1bb 166 20 take take VB cord-339886-th1da1bb 166 21 simple simple JJ cord-339886-th1da1bb 166 22 presence presence NN cord-339886-th1da1bb 166 23 or or CC cord-339886-th1da1bb 166 24 absence absence NN cord-339886-th1da1bb 166 25 signals signal NNS cord-339886-th1da1bb 166 26 and and CC cord-339886-th1da1bb 166 27 derive derive VB cord-339886-th1da1bb 166 28 useful useful JJ cord-339886-th1da1bb 166 29 epidemiological epidemiological JJ cord-339886-th1da1bb 166 30 insights insight NNS cord-339886-th1da1bb 166 31 : : : cord-339886-th1da1bb 166 32 signals signal NNS cord-339886-th1da1bb 166 33 of of IN cord-339886-th1da1bb 166 34 population population NN cord-339886-th1da1bb 166 35 expansion expansion NN cord-339886-th1da1bb 166 36 ; ; : cord-339886-th1da1bb 166 37 evidence evidence NN cord-339886-th1da1bb 166 38 of of IN cord-339886-th1da1bb 166 39 transmission transmission NN cord-339886-th1da1bb 166 40 within within IN cord-339886-th1da1bb 166 41 and and CC cord-339886-th1da1bb 166 42 between between IN cord-339886-th1da1bb 166 43 animal animal NN cord-339886-th1da1bb 166 44 reservoirs reservoir NNS cord-339886-th1da1bb 166 45 and and CC cord-339886-th1da1bb 166 46 humans human NNS cord-339886-th1da1bb 166 47 ; ; : cord-339886-th1da1bb 166 48 and and CC cord-339886-th1da1bb 166 49 epidemiological epidemiological JJ cord-339886-th1da1bb 166 50 analysis analysis NN cord-339886-th1da1bb 166 51 of of IN cord-339886-th1da1bb 166 52 a a DT cord-339886-th1da1bb 166 53 pathogen pathogen NN cord-339886-th1da1bb 166 54 's 's POS cord-339886-th1da1bb 166 55 early early JJ cord-339886-th1da1bb 166 56 expansion expansion NN cord-339886-th1da1bb 166 57 . . . cord-339886-th1da1bb 167 1 Most Most JJS cord-339886-th1da1bb 167 2 modern modern JJ cord-339886-th1da1bb 167 3 surveillance surveillance NN cord-339886-th1da1bb 167 4 systems system NNS cord-339886-th1da1bb 167 5 use use VBP cord-339886-th1da1bb 167 6 human human JJ cord-339886-th1da1bb 167 7 , , , cord-339886-th1da1bb 167 8 animal animal NN cord-339886-th1da1bb 167 9 , , , cord-339886-th1da1bb 167 10 environmental environmental JJ cord-339886-th1da1bb 167 11 and and CC cord-339886-th1da1bb 167 12 other other JJ cord-339886-th1da1bb 167 13 data datum NNS cord-339886-th1da1bb 167 14 76 76 CD cord-339886-th1da1bb 167 15 to to TO cord-339886-th1da1bb 167 16 carry carry VB cord-339886-th1da1bb 167 17 out out RP cord-339886-th1da1bb 167 18 disease disease NN cord-339886-th1da1bb 167 19 - - HYPH cord-339886-th1da1bb 167 20 specific specific JJ cord-339886-th1da1bb 167 21 surveillance surveillance NN cord-339886-th1da1bb 167 22 , , , cord-339886-th1da1bb 167 23 in in IN cord-339886-th1da1bb 167 24 which which WDT cord-339886-th1da1bb 167 25 a a DT cord-339886-th1da1bb 167 26 single single JJ cord-339886-th1da1bb 167 27 disease disease NN cord-339886-th1da1bb 167 28 is be VBZ cord-339886-th1da1bb 167 29 monitored monitor VBN cord-339886-th1da1bb 167 30 through through IN cord-339886-th1da1bb 167 31 one one CD cord-339886-th1da1bb 167 32 or or CC cord-339886-th1da1bb 167 33 more more JJR cord-339886-th1da1bb 167 34 data data NN cord-339886-th1da1bb 167 35 streams stream NNS cord-339886-th1da1bb 167 36 , , , cord-339886-th1da1bb 167 37 such such JJ cord-339886-th1da1bb 167 38 as as IN cord-339886-th1da1bb 167 39 positive positive JJ cord-339886-th1da1bb 167 40 laboratory laboratory NN cord-339886-th1da1bb 167 41 test test NN cord-339886-th1da1bb 167 42 results result NNS cord-339886-th1da1bb 167 43 or or CC cord-339886-th1da1bb 167 44 reportable reportable JJ cord-339886-th1da1bb 167 45 communicable communicable JJ cord-339886-th1da1bb 167 46 disease disease NN cord-339886-th1da1bb 167 47 notifications notification NNS cord-339886-th1da1bb 167 48 . . . cord-339886-th1da1bb 168 1 Despite despite IN cord-339886-th1da1bb 168 2 marked marked JJ cord-339886-th1da1bb 168 3 advances advance NNS cord-339886-th1da1bb 168 4 over over IN cord-339886-th1da1bb 168 5 the the DT cord-339886-th1da1bb 168 6 preceding precede VBG cord-339886-th1da1bb 168 7 decades decade NNS cord-339886-th1da1bb 168 8 , , , cord-339886-th1da1bb 168 9 testimony testimony NN cord-339886-th1da1bb 168 10 from from IN cord-339886-th1da1bb 168 11 multiple multiple JJ cord-339886-th1da1bb 168 12 expert expert NN cord-339886-th1da1bb 168 13 groups group NNS cord-339886-th1da1bb 168 14 has have VBZ cord-339886-th1da1bb 168 15 repeatedly repeatedly RB cord-339886-th1da1bb 168 16 emphasized emphasize VBN cord-339886-th1da1bb 168 17 the the DT cord-339886-th1da1bb 168 18 need need NN cord-339886-th1da1bb 168 19 for for IN cord-339886-th1da1bb 168 20 improved improved JJ cord-339886-th1da1bb 168 21 surveillance surveillance NN cord-339886-th1da1bb 168 22 capacity capacity NN cord-339886-th1da1bb 168 23 8 8 CD cord-339886-th1da1bb 168 24 , , , cord-339886-th1da1bb 168 25 77 77 CD cord-339886-th1da1bb 168 26 , , , cord-339886-th1da1bb 168 27 including include VBG cord-339886-th1da1bb 168 28 the the DT cord-339886-th1da1bb 168 29 use use NN cord-339886-th1da1bb 168 30 of of IN cord-339886-th1da1bb 168 31 syndromic syndromic JJ cord-339886-th1da1bb 168 32 surveillance surveillance NN cord-339886-th1da1bb 168 33 , , , cord-339886-th1da1bb 168 34 a a DT cord-339886-th1da1bb 168 35 more more JJR cord-339886-th1da1bb 168 36 pathogen pathogen NN cord-339886-th1da1bb 168 37 - - HYPH cord-339886-th1da1bb 168 38 agnostic agnostic JJ cord-339886-th1da1bb 168 39 approach approach NN cord-339886-th1da1bb 168 40 aimed aim VBN cord-339886-th1da1bb 168 41 at at IN cord-339886-th1da1bb 168 42 early early JJ cord-339886-th1da1bb 168 43 detection detection NN cord-339886-th1da1bb 168 44 of of IN cord-339886-th1da1bb 168 45 emerging emerge VBG cord-339886-th1da1bb 168 46 disease disease NN cord-339886-th1da1bb 168 47 78 78 CD cord-339886-th1da1bb 168 48 , , , cord-339886-th1da1bb 168 49 79 79 CD cord-339886-th1da1bb 168 50 . . . cord-339886-th1da1bb 169 1 Syndromic syndromic JJ cord-339886-th1da1bb 169 2 surveillance surveillance NN cord-339886-th1da1bb 169 3 systems system NNS cord-339886-th1da1bb 169 4 might may MD cord-339886-th1da1bb 169 5 leverage leverage VB cord-339886-th1da1bb 169 6 unique unique JJ cord-339886-th1da1bb 169 7 data data NN cord-339886-th1da1bb 169 8 streams stream NNS cord-339886-th1da1bb 169 9 such such JJ cord-339886-th1da1bb 169 10 as as IN cord-339886-th1da1bb 169 11 school school NN cord-339886-th1da1bb 169 12 or or CC cord-339886-th1da1bb 169 13 employee employee NN cord-339886-th1da1bb 169 14 absenteeism absenteeism NN cord-339886-th1da1bb 169 15 , , , cord-339886-th1da1bb 169 16 grocery grocery NN cord-339886-th1da1bb 169 17 store store NN cord-339886-th1da1bb 169 18 or or CC cord-339886-th1da1bb 169 19 pharmacy pharmacy NN cord-339886-th1da1bb 169 20 purchases purchase NNS cord-339886-th1da1bb 169 21 of of IN cord-339886-th1da1bb 169 22 specific specific JJ cord-339886-th1da1bb 169 23 items item NNS cord-339886-th1da1bb 169 24 or or CC cord-339886-th1da1bb 169 25 calls call VBZ cord-339886-th1da1bb 169 26 to to IN cord-339886-th1da1bb 169 27 a a DT cord-339886-th1da1bb 169 28 nursing nursing NN cord-339886-th1da1bb 169 29 hotline hotline NN cord-339886-th1da1bb 169 30 as as IN cord-339886-th1da1bb 169 31 signals signal NNS cord-339886-th1da1bb 169 32 of of IN cord-339886-th1da1bb 169 33 illness illness NN cord-339886-th1da1bb 169 34 in in IN cord-339886-th1da1bb 169 35 a a DT cord-339886-th1da1bb 169 36 population population NN cord-339886-th1da1bb 169 37 . . . cord-339886-th1da1bb 170 1 Increasingly increasingly RB cord-339886-th1da1bb 170 2 , , , cord-339886-th1da1bb 170 3 digital digital JJ cord-339886-th1da1bb 170 4 streams stream NNS cord-339886-th1da1bb 170 5 are be VBP cord-339886-th1da1bb 170 6 being be VBG cord-339886-th1da1bb 170 7 used use VBN cord-339886-th1da1bb 170 8 as as IN cord-339886-th1da1bb 170 9 an an DT cord-339886-th1da1bb 170 10 input input NN cord-339886-th1da1bb 170 11 to to IN cord-339886-th1da1bb 170 12 these these DT cord-339886-th1da1bb 170 13 systems system NNS cord-339886-th1da1bb 170 14 , , , cord-339886-th1da1bb 170 15 be be VB cord-339886-th1da1bb 170 16 they -PRON- PRP cord-339886-th1da1bb 170 17 participatory participatory JJ cord-339886-th1da1bb 170 18 epidemiology epidemiology NN cord-339886-th1da1bb 170 19 projects project NNS cord-339886-th1da1bb 170 20 such such JJ cord-339886-th1da1bb 170 21 as as IN cord-339886-th1da1bb 170 22 Flu Flu NNP cord-339886-th1da1bb 170 23 Near near IN cord-339886-th1da1bb 170 24 You -PRON- PRP cord-339886-th1da1bb 170 25 80 80 CD cord-339886-th1da1bb 170 26 , , , cord-339886-th1da1bb 170 27 the the DT cord-339886-th1da1bb 170 28 automated automate VBN cord-339886-th1da1bb 170 29 analysis analysis NN cord-339886-th1da1bb 170 30 of of IN cord-339886-th1da1bb 170 31 trending trend VBG cord-339886-th1da1bb 170 32 words word NNS cord-339886-th1da1bb 170 33 or or CC cord-339886-th1da1bb 170 34 phrases phrase NNS cord-339886-th1da1bb 170 35 on on IN cord-339886-th1da1bb 170 36 social social JJ cord-339886-th1da1bb 170 37 media medium NNS cord-339886-th1da1bb 170 38 sites site NNS cord-339886-th1da1bb 170 39 , , , cord-339886-th1da1bb 170 40 such such JJ cord-339886-th1da1bb 170 41 as as IN cord-339886-th1da1bb 170 42 Twitter Twitter NNP cord-339886-th1da1bb 170 43 81,82 81,82 CD cord-339886-th1da1bb 170 44 , , , cord-339886-th1da1bb 170 45 or or CC cord-339886-th1da1bb 170 46 Internet internet NN cord-339886-th1da1bb 170 47 search search NN cord-339886-th1da1bb 170 48 queries query NNS cord-339886-th1da1bb 170 49 [ [ -LRB- cord-339886-th1da1bb 170 50 83 83 CD cord-339886-th1da1bb 170 51 ] ] -RRB- cord-339886-th1da1bb 170 52 [ [ -LRB- cord-339886-th1da1bb 170 53 84 84 CD cord-339886-th1da1bb 170 54 ] ] -RRB- cord-339886-th1da1bb 170 55 [ [ -LRB- cord-339886-th1da1bb 170 56 85 85 CD cord-339886-th1da1bb 170 57 ] ] -RRB- cord-339886-th1da1bb 170 58 . . . cord-339886-th1da1bb 171 1 This this DT cord-339886-th1da1bb 171 2 new new JJ cord-339886-th1da1bb 171 3 approach approach NN cord-339886-th1da1bb 171 4 to to IN cord-339886-th1da1bb 171 5 surveillance surveillance NN cord-339886-th1da1bb 171 6 is be VBZ cord-339886-th1da1bb 171 7 known know VBN cord-339886-th1da1bb 171 8 as as IN cord-339886-th1da1bb 171 9 digital digital JJ cord-339886-th1da1bb 171 10 epidemiology epidemiology NN cord-339886-th1da1bb 171 11 and and CC cord-339886-th1da1bb 171 12 is be VBZ cord-339886-th1da1bb 171 13 also also RB cord-339886-th1da1bb 171 14 referred refer VBN cord-339886-th1da1bb 171 15 to to IN cord-339886-th1da1bb 171 16 as as IN cord-339886-th1da1bb 171 17 digital digital JJ cord-339886-th1da1bb 171 18 disease disease NN cord-339886-th1da1bb 171 19 detection detection NN cord-339886-th1da1bb 171 20 86 86 CD cord-339886-th1da1bb 171 21 . . . cord-339886-th1da1bb 172 1 In in IN cord-339886-th1da1bb 172 2 digital digital JJ cord-339886-th1da1bb 172 3 epidemiology epidemiology NN cord-339886-th1da1bb 172 4 , , , cord-339886-th1da1bb 172 5 information information NN cord-339886-th1da1bb 172 6 is be VBZ cord-339886-th1da1bb 172 7 first first RB cord-339886-th1da1bb 172 8 retrieved retrieve VBN cord-339886-th1da1bb 172 9 from from IN cord-339886-th1da1bb 172 10 a a DT cord-339886-th1da1bb 172 11 range range NN cord-339886-th1da1bb 172 12 of of IN cord-339886-th1da1bb 172 13 sources source NNS cord-339886-th1da1bb 172 14 , , , cord-339886-th1da1bb 172 15 including include VBG cord-339886-th1da1bb 172 16 digital digital JJ cord-339886-th1da1bb 172 17 media medium NNS cord-339886-th1da1bb 172 18 , , , cord-339886-th1da1bb 172 19 newswires newswire NNS cord-339886-th1da1bb 172 20 , , , cord-339886-th1da1bb 172 21 official official JJ cord-339886-th1da1bb 172 22 reports report NNS cord-339886-th1da1bb 172 23 and and CC cord-339886-th1da1bb 172 24 crowd crowd NN cord-339886-th1da1bb 172 25 sourcing sourcing NN cord-339886-th1da1bb 172 26 ; ; : cord-339886-th1da1bb 172 27 second second RB cord-339886-th1da1bb 172 28 , , , cord-339886-th1da1bb 172 29 translated translate VBN cord-339886-th1da1bb 172 30 and and CC cord-339886-th1da1bb 172 31 processed process VBN cord-339886-th1da1bb 172 32 , , , cord-339886-th1da1bb 172 33 which which WDT cord-339886-th1da1bb 172 34 includes include VBZ cord-339886-th1da1bb 172 35 extracting extract VBG cord-339886-th1da1bb 172 36 disease disease NN cord-339886-th1da1bb 172 37 events event NNS cord-339886-th1da1bb 172 38 and and CC cord-339886-th1da1bb 172 39 ensuring ensure VBG cord-339886-th1da1bb 172 40 reports report NNS cord-339886-th1da1bb 172 41 are be VBP cord-339886-th1da1bb 172 42 not not RB cord-339886-th1da1bb 172 43 duplicated duplicate VBN cord-339886-th1da1bb 172 44 ; ; : cord-339886-th1da1bb 172 45 third third RB cord-339886-th1da1bb 172 46 , , , cord-339886-th1da1bb 172 47 analysed analyse VBN cord-339886-th1da1bb 172 48 for for IN cord-339886-th1da1bb 172 49 trends trend NNS cord-339886-th1da1bb 172 50 ; ; : cord-339886-th1da1bb 172 51 and and CC cord-339886-th1da1bb 172 52 fourth fourth RB cord-339886-th1da1bb 172 53 , , , cord-339886-th1da1bb 172 54 disseminated disseminate VBN cord-339886-th1da1bb 172 55 to to IN cord-339886-th1da1bb 172 56 the the DT cord-339886-th1da1bb 172 57 community community NN cord-339886-th1da1bb 172 58 through through IN cord-339886-th1da1bb 172 59 media medium NNS cord-339886-th1da1bb 172 60 , , , cord-339886-th1da1bb 172 61 including include VBG cord-339886-th1da1bb 172 62 websites website NNS cord-339886-th1da1bb 172 63 , , , cord-339886-th1da1bb 172 64 email email NN cord-339886-th1da1bb 172 65 lists list NNS cord-339886-th1da1bb 172 66 and and CC cord-339886-th1da1bb 172 67 mobile mobile NN cord-339886-th1da1bb 172 68 alerts alert NNS cord-339886-th1da1bb 172 69 87 87 CD cord-339886-th1da1bb 173 1 In in IN cord-339886-th1da1bb 173 2 spillover spillover NN cord-339886-th1da1bb 173 3 , , , cord-339886-th1da1bb 173 4 a a DT cord-339886-th1da1bb 173 5 pathogen pathogen NN cord-339886-th1da1bb 173 6 previously previously RB cord-339886-th1da1bb 173 7 restricted restrict VBN cord-339886-th1da1bb 173 8 to to IN cord-339886-th1da1bb 173 9 animals animal NNS cord-339886-th1da1bb 173 10 gradually gradually RB cord-339886-th1da1bb 173 11 begins begin VBZ cord-339886-th1da1bb 173 12 to to TO cord-339886-th1da1bb 173 13 move move VB cord-339886-th1da1bb 173 14 into into IN cord-339886-th1da1bb 173 15 the the DT cord-339886-th1da1bb 173 16 human human JJ cord-339886-th1da1bb 173 17 population population NN cord-339886-th1da1bb 173 18 . . . cord-339886-th1da1bb 174 1 During during IN cord-339886-th1da1bb 174 2 stage stage NN cord-339886-th1da1bb 174 3 one one CD cord-339886-th1da1bb 174 4 ( ( -LRB- cord-339886-th1da1bb 174 5 pre pre NN cord-339886-th1da1bb 174 6 - - NN cord-339886-th1da1bb 174 7 emergence emergence JJ cord-339886-th1da1bb 174 8 ) ) -RRB- cord-339886-th1da1bb 174 9 , , , cord-339886-th1da1bb 174 10 as as IN cord-339886-th1da1bb 174 11 a a DT cord-339886-th1da1bb 174 12 result result NN cord-339886-th1da1bb 174 13 of of IN cord-339886-th1da1bb 174 14 changing change VBG cord-339886-th1da1bb 174 15 demographics demographic NNS cord-339886-th1da1bb 174 16 and/or and/or CC cord-339886-th1da1bb 174 17 land land NN cord-339886-th1da1bb 174 18 use use NN cord-339886-th1da1bb 174 19 , , , cord-339886-th1da1bb 174 20 a a DT cord-339886-th1da1bb 174 21 pathogen pathogen NN cord-339886-th1da1bb 174 22 undergoes undergo VBZ cord-339886-th1da1bb 174 23 a a DT cord-339886-th1da1bb 174 24 population population NN cord-339886-th1da1bb 174 25 expansion expansion NN cord-339886-th1da1bb 174 26 , , , cord-339886-th1da1bb 174 27 extends extend VBZ cord-339886-th1da1bb 174 28 its -PRON- PRP$ cord-339886-th1da1bb 174 29 host host NN cord-339886-th1da1bb 174 30 range range NN cord-339886-th1da1bb 174 31 or or CC cord-339886-th1da1bb 174 32 moves move NNS cord-339886-th1da1bb 174 33 into into IN cord-339886-th1da1bb 174 34 a a DT cord-339886-th1da1bb 174 35 new new JJ cord-339886-th1da1bb 174 36 geographic geographic JJ cord-339886-th1da1bb 174 37 region region NN cord-339886-th1da1bb 174 38 . . . cord-339886-th1da1bb 175 1 During during IN cord-339886-th1da1bb 175 2 stage stage NN cord-339886-th1da1bb 175 3 two two CD cord-339886-th1da1bb 175 4 ( ( -LRB- cord-339886-th1da1bb 175 5 localized localize VBN cord-339886-th1da1bb 175 6 emergence emergence NN cord-339886-th1da1bb 175 7 ) ) -RRB- cord-339886-th1da1bb 175 8 , , , cord-339886-th1da1bb 175 9 contact contact NN cord-339886-th1da1bb 175 10 with with IN cord-339886-th1da1bb 175 11 animals animal NNS cord-339886-th1da1bb 175 12 or or CC cord-339886-th1da1bb 175 13 animal animal NN cord-339886-th1da1bb 175 14 products product NNS cord-339886-th1da1bb 175 15 results result NNS cord-339886-th1da1bb 175 16 in in IN cord-339886-th1da1bb 175 17 spillover spillover NN cord-339886-th1da1bb 175 18 of of IN cord-339886-th1da1bb 175 19 the the DT cord-339886-th1da1bb 175 20 pathogen pathogen NN cord-339886-th1da1bb 175 21 from from IN cord-339886-th1da1bb 175 22 its -PRON- PRP$ cord-339886-th1da1bb 175 23 natural natural JJ cord-339886-th1da1bb 175 24 reservoir(s reservoir(s NNP cord-339886-th1da1bb 175 25 ) ) -RRB- cord-339886-th1da1bb 175 26 into into IN cord-339886-th1da1bb 175 27 humans human NNS cord-339886-th1da1bb 175 28 but but CC cord-339886-th1da1bb 175 29 with with IN cord-339886-th1da1bb 175 30 little little JJ cord-339886-th1da1bb 175 31 to to IN cord-339886-th1da1bb 175 32 no no DT cord-339886-th1da1bb 175 33 onward onward JJ cord-339886-th1da1bb 175 34 person person NN cord-339886-th1da1bb 175 35 - - HYPH cord-339886-th1da1bb 175 36 to to IN cord-339886-th1da1bb 175 37 - - HYPH cord-339886-th1da1bb 175 38 person person NN cord-339886-th1da1bb 175 39 transmission transmission NN cord-339886-th1da1bb 175 40 . . . cord-339886-th1da1bb 176 1 During during IN cord-339886-th1da1bb 176 2 stage stage NN cord-339886-th1da1bb 176 3 three three CD cord-339886-th1da1bb 176 4 ( ( -LRB- cord-339886-th1da1bb 176 5 pandemic pandemic JJ cord-339886-th1da1bb 176 6 emergence emergence NN cord-339886-th1da1bb 176 7 ) ) -RRB- cord-339886-th1da1bb 176 8 , , , cord-339886-th1da1bb 176 9 the the DT cord-339886-th1da1bb 176 10 pathogen pathogen NN cord-339886-th1da1bb 176 11 is be VBZ cord-339886-th1da1bb 176 12 able able JJ cord-339886-th1da1bb 176 13 to to TO cord-339886-th1da1bb 176 14 sustain sustain VB cord-339886-th1da1bb 176 15 long long JJ cord-339886-th1da1bb 176 16 transmission transmission NN cord-339886-th1da1bb 176 17 chains chain NNS cord-339886-th1da1bb 176 18 , , , cord-339886-th1da1bb 176 19 that that RB cord-339886-th1da1bb 176 20 is is RB cord-339886-th1da1bb 176 21 , , , cord-339886-th1da1bb 176 22 a a DT cord-339886-th1da1bb 176 23 series series NN cord-339886-th1da1bb 176 24 of of IN cord-339886-th1da1bb 176 25 disease disease NN cord-339886-th1da1bb 176 26 transmission transmission NN cord-339886-th1da1bb 176 27 events event NNS cord-339886-th1da1bb 176 28 , , , cord-339886-th1da1bb 176 29 such such JJ cord-339886-th1da1bb 176 30 as as IN cord-339886-th1da1bb 176 31 a a DT cord-339886-th1da1bb 176 32 sequential sequential JJ cord-339886-th1da1bb 176 33 series series NN cord-339886-th1da1bb 176 34 of of IN cord-339886-th1da1bb 176 35 person person NN cord-339886-th1da1bb 176 36 - - HYPH cord-339886-th1da1bb 176 37 to to IN cord-339886-th1da1bb 176 38 - - HYPH cord-339886-th1da1bb 176 39 person person NN cord-339886-th1da1bb 176 40 transmissions transmission NNS cord-339886-th1da1bb 176 41 , , , cord-339886-th1da1bb 176 42 and and CC cord-339886-th1da1bb 176 43 its -PRON- PRP$ cord-339886-th1da1bb 176 44 movement movement NN cord-339886-th1da1bb 176 45 across across IN cord-339886-th1da1bb 176 46 borders border NNS cord-339886-th1da1bb 176 47 is be VBZ cord-339886-th1da1bb 176 48 facilitated facilitate VBN cord-339886-th1da1bb 176 49 by by IN cord-339886-th1da1bb 176 50 human human JJ cord-339886-th1da1bb 176 51 travel travel NN cord-339886-th1da1bb 176 52 patterns pattern NNS cord-339886-th1da1bb 176 53 65 65 CD cord-339886-th1da1bb 176 54 . . . cord-339886-th1da1bb 177 1 epidemiology epidemiology NN cord-339886-th1da1bb 177 2 platforms platform NNS cord-339886-th1da1bb 177 3 are be VBP cord-339886-th1da1bb 177 4 currently currently RB cord-339886-th1da1bb 177 5 operating operate VBG cord-339886-th1da1bb 177 6 88 88 CD cord-339886-th1da1bb 177 7 , , , cord-339886-th1da1bb 177 8 and and CC cord-339886-th1da1bb 177 9 their -PRON- PRP$ cord-339886-th1da1bb 177 10 flexible flexible JJ cord-339886-th1da1bb 177 11 nature nature NN cord-339886-th1da1bb 177 12 and and CC cord-339886-th1da1bb 177 13 cost cost NN cord-339886-th1da1bb 177 14 - - HYPH cord-339886-th1da1bb 177 15 effective effective JJ cord-339886-th1da1bb 177 16 , , , cord-339886-th1da1bb 177 17 real real JJ cord-339886-th1da1bb 177 18 - - HYPH cord-339886-th1da1bb 177 19 time time NN cord-339886-th1da1bb 177 20 reporting reporting NN cord-339886-th1da1bb 177 21 make make VBP cord-339886-th1da1bb 177 22 them -PRON- PRP cord-339886-th1da1bb 177 23 effective effective JJ cord-339886-th1da1bb 177 24 tools tool NNS cord-339886-th1da1bb 177 25 for for IN cord-339886-th1da1bb 177 26 gathering gather VBG cord-339886-th1da1bb 177 27 epidemic epidemic NN cord-339886-th1da1bb 177 28 intelligence intelligence NN cord-339886-th1da1bb 177 29 , , , cord-339886-th1da1bb 177 30 particularly particularly RB cord-339886-th1da1bb 177 31 in in IN cord-339886-th1da1bb 177 32 settings setting NNS cord-339886-th1da1bb 177 33 lacking lack VBG cord-339886-th1da1bb 177 34 traditional traditional JJ cord-339886-th1da1bb 177 35 disease disease NN cord-339886-th1da1bb 177 36 surveillance surveillance NN cord-339886-th1da1bb 177 37 systems system NNS cord-339886-th1da1bb 177 38 . . . cord-339886-th1da1bb 178 1 The the DT cord-339886-th1da1bb 178 2 fields field NNS cord-339886-th1da1bb 178 3 of of IN cord-339886-th1da1bb 178 4 One one CD cord-339886-th1da1bb 178 5 Health Health NNP cord-339886-th1da1bb 178 6 and and CC cord-339886-th1da1bb 178 7 digital digital JJ cord-339886-th1da1bb 178 8 epidemiology epidemiology NN cord-339886-th1da1bb 178 9 are be VBP cord-339886-th1da1bb 178 10 increasingly increasingly RB cord-339886-th1da1bb 178 11 overlapping overlap VBG cord-339886-th1da1bb 178 12 . . . cord-339886-th1da1bb 179 1 In in IN cord-339886-th1da1bb 179 2 the the DT cord-339886-th1da1bb 179 3 PREDICT PREDICT NNP cord-339886-th1da1bb 179 4 consortium consortium NN cord-339886-th1da1bb 179 5 , , , cord-339886-th1da1bb 179 6 the the DT cord-339886-th1da1bb 179 7 HealthMap HealthMap NNP cord-339886-th1da1bb 179 8 system system NN cord-339886-th1da1bb 179 9 89 89 CD cord-339886-th1da1bb 179 10 and and CC cord-339886-th1da1bb 179 11 local local JJ cord-339886-th1da1bb 179 12 media medium NNS cord-339886-th1da1bb 179 13 surveillance surveillance NN cord-339886-th1da1bb 179 14 were be VBD cord-339886-th1da1bb 179 15 combined combine VBN cord-339886-th1da1bb 179 16 to to TO cord-339886-th1da1bb 179 17 identify identify VB cord-339886-th1da1bb 179 18 307 307 CD cord-339886-th1da1bb 179 19 health health NN cord-339886-th1da1bb 179 20 events event NNS cord-339886-th1da1bb 179 21 in in IN cord-339886-th1da1bb 179 22 five five CD cord-339886-th1da1bb 179 23 countries country NNS cord-339886-th1da1bb 179 24 over over IN cord-339886-th1da1bb 179 25 a a DT cord-339886-th1da1bb 179 26 16-week 16-week JJ cord-339886-th1da1bb 179 27 period period NN cord-339886-th1da1bb 179 28 90 90 CD cord-339886-th1da1bb 179 29 . . . cord-339886-th1da1bb 180 1 PREDICT predict VB cord-339886-th1da1bb 180 2 also also RB cord-339886-th1da1bb 180 3 suggested suggest VBD cord-339886-th1da1bb 180 4 a a DT cord-339886-th1da1bb 180 5 role role NN cord-339886-th1da1bb 180 6 for for IN cord-339886-th1da1bb 180 7 digital digital JJ cord-339886-th1da1bb 180 8 epidemiology epidemiology NN cord-339886-th1da1bb 180 9 in in IN cord-339886-th1da1bb 180 10 not not RB cord-339886-th1da1bb 180 11 just just RB cord-339886-th1da1bb 180 12 event event NN cord-339886-th1da1bb 180 13 detection detection NN cord-339886-th1da1bb 180 14 but but CC cord-339886-th1da1bb 180 15 also also RB cord-339886-th1da1bb 180 16 the the DT cord-339886-th1da1bb 180 17 identification identification NN cord-339886-th1da1bb 180 18 of of IN cord-339886-th1da1bb 180 19 changing change VBG cord-339886-th1da1bb 180 20 EID EID NNP cord-339886-th1da1bb 180 21 drivers driver NNS cord-339886-th1da1bb 180 22 . . . cord-339886-th1da1bb 181 1 EIDs eid NNS cord-339886-th1da1bb 181 2 are be VBP cord-339886-th1da1bb 181 3 driven drive VBN cord-339886-th1da1bb 181 4 by by IN cord-339886-th1da1bb 181 5 multiple multiple JJ cord-339886-th1da1bb 181 6 factors factor NNS cord-339886-th1da1bb 181 7 , , , cord-339886-th1da1bb 181 8 many many JJ cord-339886-th1da1bb 181 9 of of IN cord-339886-th1da1bb 181 10 which which WDT cord-339886-th1da1bb 181 11 have have VBP cord-339886-th1da1bb 181 12 digital digital JJ cord-339886-th1da1bb 181 13 outputs output NNS cord-339886-th1da1bb 181 14 and and CC cord-339886-th1da1bb 181 15 represent represent VBP cord-339886-th1da1bb 181 16 novel novel JJ cord-339886-th1da1bb 181 17 sources source NNS cord-339886-th1da1bb 181 18 of of IN cord-339886-th1da1bb 181 19 surveillance surveillance NN cord-339886-th1da1bb 181 20 data datum NNS cord-339886-th1da1bb 181 21 91 91 CD cord-339886-th1da1bb 181 22 . . . cord-339886-th1da1bb 182 1 For for IN cord-339886-th1da1bb 182 2 example example NN cord-339886-th1da1bb 182 3 , , , cord-339886-th1da1bb 182 4 human human JJ cord-339886-th1da1bb 182 5 movement movement NN cord-339886-th1da1bb 182 6 can can MD cord-339886-th1da1bb 182 7 be be VB cord-339886-th1da1bb 182 8 revealed reveal VBN cord-339886-th1da1bb 182 9 by by IN cord-339886-th1da1bb 182 10 mobile mobile JJ cord-339886-th1da1bb 182 11 phone phone NN cord-339886-th1da1bb 182 12 data datum NNS cord-339886-th1da1bb 182 13 or or CC cord-339886-th1da1bb 182 14 by by IN cord-339886-th1da1bb 182 15 the the DT cord-339886-th1da1bb 182 16 patterns pattern NNS cord-339886-th1da1bb 182 17 of of IN cord-339886-th1da1bb 182 18 lighted light VBN cord-339886-th1da1bb 182 19 cities city NNS cord-339886-th1da1bb 182 20 at at IN cord-339886-th1da1bb 182 21 night night NN cord-339886-th1da1bb 182 22 , , , cord-339886-th1da1bb 182 23 hunting hunt VBG cord-339886-th1da1bb 182 24 data datum NNS cord-339886-th1da1bb 182 25 collected collect VBN cord-339886-th1da1bb 182 26 by by IN cord-339886-th1da1bb 182 27 states state NNS cord-339886-th1da1bb 182 28 can can MD cord-339886-th1da1bb 182 29 reveal reveal VB cord-339886-th1da1bb 182 30 interactions interaction NNS cord-339886-th1da1bb 182 31 between between IN cord-339886-th1da1bb 182 32 humans human NNS cord-339886-th1da1bb 182 33 and and CC cord-339886-th1da1bb 182 34 wildlife wildlife NN cord-339886-th1da1bb 182 35 , , , cord-339886-th1da1bb 182 36 and and CC cord-339886-th1da1bb 182 37 social social JJ cord-339886-th1da1bb 182 38 media medium NNS cord-339886-th1da1bb 182 39 and and CC cord-339886-th1da1bb 182 40 digital digital JJ cord-339886-th1da1bb 182 41 news news NN cord-339886-th1da1bb 182 42 sources source NNS cord-339886-th1da1bb 182 43 can can MD cord-339886-th1da1bb 182 44 reveal reveal VB cord-339886-th1da1bb 182 45 early early JJ cord-339886-th1da1bb 182 46 signals signal NNS cord-339886-th1da1bb 182 47 of of IN cord-339886-th1da1bb 182 48 famine famine NN cord-339886-th1da1bb 182 49 , , , cord-339886-th1da1bb 182 50 war war NN cord-339886-th1da1bb 182 51 and and CC cord-339886-th1da1bb 182 52 other other JJ cord-339886-th1da1bb 182 53 social social JJ cord-339886-th1da1bb 182 54 unrest unrest NN cord-339886-th1da1bb 182 55 . . . cord-339886-th1da1bb 183 1 A a DT cord-339886-th1da1bb 183 2 major major JJ cord-339886-th1da1bb 183 3 challenge challenge NN cord-339886-th1da1bb 183 4 is be VBZ cord-339886-th1da1bb 183 5 that that IN cord-339886-th1da1bb 183 6 the the DT cord-339886-th1da1bb 183 7 number number NN cord-339886-th1da1bb 183 8 of of IN cord-339886-th1da1bb 183 9 digital digital JJ cord-339886-th1da1bb 183 10 data data NN cord-339886-th1da1bb 183 11 sets set NNS cord-339886-th1da1bb 183 12 available available JJ cord-339886-th1da1bb 183 13 for for IN cord-339886-th1da1bb 183 14 each each DT cord-339886-th1da1bb 183 15 driver driver NN cord-339886-th1da1bb 183 16 varies vary VBZ cord-339886-th1da1bb 183 17 substantially substantially RB cord-339886-th1da1bb 183 18 , , , cord-339886-th1da1bb 183 19 from from IN cord-339886-th1da1bb 183 20 hundreds hundred NNS cord-339886-th1da1bb 183 21 for for IN cord-339886-th1da1bb 183 22 surveying survey VBG cord-339886-th1da1bb 183 23 land land NN cord-339886-th1da1bb 183 24 use use NN cord-339886-th1da1bb 183 25 changes change NNS cord-339886-th1da1bb 183 26 -many -many VBD cord-339886-th1da1bb 183 27 based base VBN cord-339886-th1da1bb 183 28 on on IN cord-339886-th1da1bb 183 29 remote remote JJ cord-339886-th1da1bb 183 30 sensing sensing NN cord-339886-th1da1bb 183 31 data datum NNS cord-339886-th1da1bb 183 32 92 92 CD cord-339886-th1da1bb 183 33 -to -to ADD cord-339886-th1da1bb 184 1 mere mere JJ cord-339886-th1da1bb 184 2 handfuls handful NNS cord-339886-th1da1bb 184 3 around around IN cord-339886-th1da1bb 184 4 social social JJ cord-339886-th1da1bb 184 5 inequalities inequality NNS cord-339886-th1da1bb 184 6 and and CC cord-339886-th1da1bb 184 7 human human JJ cord-339886-th1da1bb 184 8 susceptibility susceptibility NN cord-339886-th1da1bb 184 9 to to IN cord-339886-th1da1bb 184 10 infection infection NN cord-339886-th1da1bb 184 11 , , , cord-339886-th1da1bb 184 12 with with IN cord-339886-th1da1bb 184 13 most most JJS cord-339886-th1da1bb 184 14 data datum NNS cord-339886-th1da1bb 184 15 biased bias VBN cord-339886-th1da1bb 184 16 towards towards IN cord-339886-th1da1bb 184 17 North North NNP cord-339886-th1da1bb 184 18 America America NNP cord-339886-th1da1bb 184 19 and and CC cord-339886-th1da1bb 184 20 Europe Europe NNP cord-339886-th1da1bb 184 21 . . . cord-339886-th1da1bb 185 1 The the DT cord-339886-th1da1bb 185 2 digital digital JJ cord-339886-th1da1bb 185 3 and and CC cord-339886-th1da1bb 185 4 genomic genomic JJ cord-339886-th1da1bb 185 5 epidemiology epidemiology NN cord-339886-th1da1bb 185 6 domains domain NNS cord-339886-th1da1bb 185 7 are be VBP cord-339886-th1da1bb 185 8 also also RB cord-339886-th1da1bb 185 9 starting start VBG cord-339886-th1da1bb 185 10 to to TO cord-339886-th1da1bb 185 11 overlap overlap VB cord-339886-th1da1bb 185 12 . . . cord-339886-th1da1bb 186 1 In in IN cord-339886-th1da1bb 186 2 the the DT cord-339886-th1da1bb 186 3 Ebola Ebola NNP cord-339886-th1da1bb 186 4 outbreak outbreak NN cord-339886-th1da1bb 186 5 , , , cord-339886-th1da1bb 186 6 digital digital JJ cord-339886-th1da1bb 186 7 epidemiology epidemiology NN cord-339886-th1da1bb 186 8 revealed reveal VBD cord-339886-th1da1bb 186 9 that that IN cord-339886-th1da1bb 186 10 drivers driver NNS cord-339886-th1da1bb 186 11 of of IN cord-339886-th1da1bb 186 12 infection infection NN cord-339886-th1da1bb 186 13 risk risk NN cord-339886-th1da1bb 186 14 included include VBD cord-339886-th1da1bb 186 15 settings setting NNS cord-339886-th1da1bb 186 16 where where WRB cord-339886-th1da1bb 186 17 households household NNS cord-339886-th1da1bb 186 18 lacked lack VBD cord-339886-th1da1bb 186 19 a a DT cord-339886-th1da1bb 186 20 radio radio NN cord-339886-th1da1bb 186 21 , , , cord-339886-th1da1bb 186 22 with with IN cord-339886-th1da1bb 186 23 high high JJ cord-339886-th1da1bb 186 24 rainfall rainfall NN cord-339886-th1da1bb 186 25 and and CC cord-339886-th1da1bb 186 26 with with IN cord-339886-th1da1bb 186 27 urban urban JJ cord-339886-th1da1bb 186 28 land land NN cord-339886-th1da1bb 186 29 cover cover NN cord-339886-th1da1bb 186 30 93 93 CD cord-339886-th1da1bb 186 31 , , , cord-339886-th1da1bb 186 32 echoing echo VBG cord-339886-th1da1bb 186 33 the the DT cord-339886-th1da1bb 186 34 evidence evidence NN cord-339886-th1da1bb 186 35 from from IN cord-339886-th1da1bb 186 36 a a DT cord-339886-th1da1bb 186 37 genomic genomic JJ cord-339886-th1da1bb 186 38 study study NN cord-339886-th1da1bb 186 39 suggesting suggest VBG cord-339886-th1da1bb 186 40 that that IN cord-339886-th1da1bb 186 41 sites site NNS cord-339886-th1da1bb 186 42 at at IN cord-339886-th1da1bb 186 43 which which WDT cord-339886-th1da1bb 186 44 urban urban JJ cord-339886-th1da1bb 186 45 and and CC cord-339886-th1da1bb 186 46 rural rural JJ cord-339886-th1da1bb 186 47 populations population NNS cord-339886-th1da1bb 186 48 mix mix VBP cord-339886-th1da1bb 186 49 contribute contribute VB cord-339886-th1da1bb 186 50 to to IN cord-339886-th1da1bb 186 51 disease disease NN cord-339886-th1da1bb 186 52 1 1 CD cord-339886-th1da1bb 186 53 . . . cord-339886-th1da1bb 187 1 During during IN cord-339886-th1da1bb 187 2 the the DT cord-339886-th1da1bb 187 3 Zika Zika NNP cord-339886-th1da1bb 187 4 epidemic epidemic NN cord-339886-th1da1bb 187 5 , , , cord-339886-th1da1bb 187 6 Majumder Majumder NNP cord-339886-th1da1bb 187 7 et et NNP cord-339886-th1da1bb 187 8 al al NNP cord-339886-th1da1bb 187 9 . . NNP cord-339886-th1da1bb 187 10 used use VBD cord-339886-th1da1bb 187 11 HealthMap HealthMap NNP cord-339886-th1da1bb 187 12 and and CC cord-339886-th1da1bb 187 13 Google Google NNP cord-339886-th1da1bb 187 14 Trends Trends NNPS cord-339886-th1da1bb 187 15 to to TO cord-339886-th1da1bb 187 16 estimate estimate VB cord-339886-th1da1bb 187 17 the the DT cord-339886-th1da1bb 187 18 basic basic JJ cord-339886-th1da1bb 187 19 reproductive reproductive JJ cord-339886-th1da1bb 187 20 number number NN cord-339886-th1da1bb 187 21 R r NN cord-339886-th1da1bb 187 22 0 0 CD cord-339886-th1da1bb 187 23 to to TO cord-339886-th1da1bb 187 24 be be VB cord-339886-th1da1bb 187 25 1.42 1.42 CD cord-339886-th1da1bb 187 26 - - SYM cord-339886-th1da1bb 187 27 3.83 3.83 CD cord-339886-th1da1bb 187 28 94 94 CD cord-339886-th1da1bb 187 29 ; ; : cord-339886-th1da1bb 187 30 phylo phylo JJ cord-339886-th1da1bb 187 31 dynamic dynamic JJ cord-339886-th1da1bb 187 32 estimates estimate NNS cord-339886-th1da1bb 187 33 from from IN cord-339886-th1da1bb 187 34 Brazilian brazilian JJ cord-339886-th1da1bb 187 35 genomic genomic JJ cord-339886-th1da1bb 187 36 data datum NNS cord-339886-th1da1bb 187 37 gave give VBD cord-339886-th1da1bb 187 38 similar similar JJ cord-339886-th1da1bb 187 39 ranges range NNS cord-339886-th1da1bb 187 40 ( ( -LRB- cord-339886-th1da1bb 187 41 1.29 1.29 CD cord-339886-th1da1bb 187 42 - - SYM cord-339886-th1da1bb 187 43 3.85 3.85 CD cord-339886-th1da1bb 187 44 ) ) -RRB- cord-339886-th1da1bb 187 45 3 3 CD cord-339886-th1da1bb 187 46 , , , cord-339886-th1da1bb 187 47 indicating indicate VBG cord-339886-th1da1bb 187 48 that that IN cord-339886-th1da1bb 187 49 both both DT cord-339886-th1da1bb 187 50 types type NNS cord-339886-th1da1bb 187 51 of of IN cord-339886-th1da1bb 187 52 data datum NNS cord-339886-th1da1bb 187 53 streams stream NNS cord-339886-th1da1bb 187 54 can can MD cord-339886-th1da1bb 187 55 be be VB cord-339886-th1da1bb 187 56 leveraged leverage VBN cord-339886-th1da1bb 187 57 in in IN cord-339886-th1da1bb 187 58 calculating calculate VBG cord-339886-th1da1bb 187 59 epi epi NNP cord-339886-th1da1bb 187 60 demiological demiological JJ cord-339886-th1da1bb 187 61 parameters parameter NNS cord-339886-th1da1bb 187 62 that that WDT cord-339886-th1da1bb 187 63 help help VBP cord-339886-th1da1bb 187 64 shape shape VB cord-339886-th1da1bb 187 65 the the DT cord-339886-th1da1bb 187 66 public public JJ cord-339886-th1da1bb 187 67 health health NN cord-339886-th1da1bb 187 68 response response NN cord-339886-th1da1bb 187 69 . . . cord-339886-th1da1bb 188 1 A a DT cord-339886-th1da1bb 188 2 digital digital JJ cord-339886-th1da1bb 188 3 pathogen pathogen NN cord-339886-th1da1bb 188 4 surveillance surveillance NN cord-339886-th1da1bb 188 5 era era NN cord-339886-th1da1bb 189 1 Recent recent JJ cord-339886-th1da1bb 189 2 reports report NNS cord-339886-th1da1bb 189 3 have have VBP cord-339886-th1da1bb 189 4 called call VBN cord-339886-th1da1bb 189 5 for for IN cord-339886-th1da1bb 189 6 the the DT cord-339886-th1da1bb 189 7 integration integration NN cord-339886-th1da1bb 189 8 of of IN cord-339886-th1da1bb 189 9 genomic genomic JJ cord-339886-th1da1bb 189 10 data datum NNS cord-339886-th1da1bb 189 11 with with IN cord-339886-th1da1bb 189 12 digital digital JJ cord-339886-th1da1bb 189 13 epidemiology epidemiology NN cord-339886-th1da1bb 189 14 streams stream VBZ cord-339886-th1da1bb 189 15 92 92 CD cord-339886-th1da1bb 189 16 , , , cord-339886-th1da1bb 189 17 95 95 CD cord-339886-th1da1bb 189 18 . . . cord-339886-th1da1bb 190 1 When when WRB cord-339886-th1da1bb 190 2 informed inform VBN cord-339886-th1da1bb 190 3 by by IN cord-339886-th1da1bb 190 4 a a DT cord-339886-th1da1bb 190 5 One one CD cord-339886-th1da1bb 190 6 Health Health NNP cord-339886-th1da1bb 190 7 approach approach NN cord-339886-th1da1bb 190 8 , , , cord-339886-th1da1bb 190 9 the the DT cord-339886-th1da1bb 190 10 epidemiological epidemiological JJ cord-339886-th1da1bb 190 11 potential potential NN cord-339886-th1da1bb 190 12 of of IN cord-339886-th1da1bb 190 13 this this DT cord-339886-th1da1bb 190 14 digital digital JJ cord-339886-th1da1bb 190 15 pathogen pathogen NN cord-339886-th1da1bb 190 16 surveillance surveillance NN cord-339886-th1da1bb 190 17 system system NN cord-339886-th1da1bb 190 18 is be VBZ cord-339886-th1da1bb 190 19 profound profound JJ cord-339886-th1da1bb 190 20 . . . cord-339886-th1da1bb 191 1 Imagine imagine VB cord-339886-th1da1bb 191 2 parallel parallel JJ cord-339886-th1da1bb 191 3 networks network NNS cord-339886-th1da1bb 191 4 of of IN cord-339886-th1da1bb 191 5 portable portable JJ cord-339886-th1da1bb 191 6 patho patho FW cord-339886-th1da1bb 191 7 gen gen NN cord-339886-th1da1bb 191 8 sequencers sequencer NNS cord-339886-th1da1bb 191 9 deployed deploy VBN cord-339886-th1da1bb 191 10 to to IN cord-339886-th1da1bb 191 11 laboratories laboratory NNS cord-339886-th1da1bb 191 12 and and CC cord-339886-th1da1bb 191 13 communities community NNS cord-339886-th1da1bb 191 14 in in IN cord-339886-th1da1bb 191 15 EID eid NN cord-339886-th1da1bb 191 16 hot hot JJ cord-339886-th1da1bb 191 17 spots spot NNS cord-339886-th1da1bb 192 1 -regions -region NNS cord-339886-th1da1bb 192 2 that that WDT cord-339886-th1da1bb 192 3 are be VBP cord-339886-th1da1bb 192 4 traditionally traditionally RB cord-339886-th1da1bb 192 5 underserved underserved JJ cord-339886-th1da1bb 192 6 with with IN cord-339886-th1da1bb 192 7 respect respect NN cord-339886-th1da1bb 192 8 to to IN cord-339886-th1da1bb 192 9 laboratory laboratory NN cord-339886-th1da1bb 192 10 and and CC cord-339886-th1da1bb 192 11 surveillance surveillance NN cord-339886-th1da1bb 192 12 capacity capacity NN cord-339886-th1da1bb 192 13 -and -and HYPH cord-339886-th1da1bb 192 14 processing processing NN cord-339886-th1da1bb 192 15 samples sample NNS cord-339886-th1da1bb 192 16 collected collect VBN cord-339886-th1da1bb 192 17 from from IN cord-339886-th1da1bb 192 18 targeted target VBN cord-339886-th1da1bb 192 19 sentinel sentinel JJ cord-339886-th1da1bb 192 20 wildlife wildlife NN cord-339886-th1da1bb 192 21 species specie NNS cord-339886-th1da1bb 192 22 , , , cord-339886-th1da1bb 192 23 insect insect NN cord-339886-th1da1bb 192 24 vectors vector NNS cord-339886-th1da1bb 192 25 and and CC cord-339886-th1da1bb 192 26 humans human NNS cord-339886-th1da1bb 192 27 ( ( -LRB- cord-339886-th1da1bb 192 28 FIG FIG NNP cord-339886-th1da1bb 192 29 . . . cord-339886-th1da1bb 192 30 5 5 CD cord-339886-th1da1bb 192 31 ) ) -RRB- cord-339886-th1da1bb 192 32 . . . cord-339886-th1da1bb 193 1 Samples sample NNS cord-339886-th1da1bb 193 2 would would MD cord-339886-th1da1bb 193 3 be be VB cord-339886-th1da1bb 193 4 pooled pool VBN cord-339886-th1da1bb 193 5 for for IN cord-339886-th1da1bb 193 6 routine routine JJ cord-339886-th1da1bb 193 7 surveillance surveillance NN cord-339886-th1da1bb 193 8 -either -either IN cord-339886-th1da1bb 193 9 through through IN cord-339886-th1da1bb 193 10 targeted target VBN cord-339886-th1da1bb 193 11 diagnostics diagnostic NNS cord-339886-th1da1bb 193 12 or or CC cord-339886-th1da1bb 193 13 , , , cord-339886-th1da1bb 193 14 if if IN cord-339886-th1da1bb 193 15 the the DT cord-339886-th1da1bb 193 16 issue issue NN cord-339886-th1da1bb 193 17 of of IN cord-339886-th1da1bb 193 18 analytical analytical JJ cord-339886-th1da1bb 193 19 sensitivity sensitivity NN cord-339886-th1da1bb 193 20 can can MD cord-339886-th1da1bb 193 21 be be VB cord-339886-th1da1bb 193 22 overcome overcome VBN cord-339886-th1da1bb 193 23 , , , cord-339886-th1da1bb 193 24 through through IN cord-339886-th1da1bb 193 25 metagenomics metagenomic NNS cord-339886-th1da1bb 193 26 -with -with . cord-339886-th1da1bb 194 1 a a DT cord-339886-th1da1bb 194 2 full full JJ cord-339886-th1da1bb 194 3 genomic genomic JJ cord-339886-th1da1bb 194 4 work work NN cord-339886-th1da1bb 194 5 - - HYPH cord-339886-th1da1bb 194 6 up up NN cord-339886-th1da1bb 194 7 of of IN cord-339886-th1da1bb 194 8 individual individual JJ cord-339886-th1da1bb 194 9 samples sample NNS cord-339886-th1da1bb 194 10 should should MD cord-339886-th1da1bb 194 11 a a DT cord-339886-th1da1bb 194 12 pathogenic pathogenic JJ cord-339886-th1da1bb 194 13 signal signal NN cord-339886-th1da1bb 194 14 be be VB cord-339886-th1da1bb 194 15 detected detect VBN cord-339886-th1da1bb 194 16 . . . cord-339886-th1da1bb 195 1 At at IN cord-339886-th1da1bb 195 2 the the DT cord-339886-th1da1bb 195 3 same same JJ cord-339886-th1da1bb 195 4 time time NN cord-339886-th1da1bb 195 5 , , , cord-339886-th1da1bb 195 6 existing exist VBG cord-339886-th1da1bb 195 7 Internet internet NN cord-339886-th1da1bb 195 8 - - HYPH cord-339886-th1da1bb 195 9 based base VBN cord-339886-th1da1bb 195 10 platforms platform NNS cord-339886-th1da1bb 195 11 such such JJ cord-339886-th1da1bb 195 12 as as IN cord-339886-th1da1bb 195 13 HealthMap HealthMap NNP cord-339886-th1da1bb 195 14 and and CC cord-339886-th1da1bb 195 15 new new JJ cord-339886-th1da1bb 195 16 local local JJ cord-339886-th1da1bb 195 17 participatory participatory JJ cord-339886-th1da1bb 195 18 epidemiology epidemiology NN cord-339886-th1da1bb 195 19 efforts effort NNS cord-339886-th1da1bb 195 20 would would MD cord-339886-th1da1bb 195 21 be be VB cord-339886-th1da1bb 195 22 collecting collect VBG cord-339886-th1da1bb 195 23 data datum NNS cord-339886-th1da1bb 195 24 to to IN cord-339886-th1da1bb 195 25 both both DT cord-339886-th1da1bb 195 26 identify identify VB cord-339886-th1da1bb 195 27 potential potential JJ cord-339886-th1da1bb 195 28 hotspot hotspot NN cord-339886-th1da1bb 195 29 regions region NNS cord-339886-th1da1bb 195 30 and and CC cord-339886-th1da1bb 195 31 detect detect VB cord-339886-th1da1bb 195 32 EID eid NN cord-339886-th1da1bb 195 33 events event NNS cord-339886-th1da1bb 195 34 , , , cord-339886-th1da1bb 195 35 enabling enable VBG cord-339886-th1da1bb 195 36 both both DT cord-339886-th1da1bb 195 37 prospective prospective JJ cord-339886-th1da1bb 195 38 and and CC cord-339886-th1da1bb 195 39 rapid rapid JJ cord-339886-th1da1bb 195 40 - - HYPH cord-339886-th1da1bb 195 41 response response NN cord-339886-th1da1bb 195 42 deployment deployment NN cord-339886-th1da1bb 195 43 of of IN cord-339886-th1da1bb 195 44 additional additional JJ cord-339886-th1da1bb 195 45 sequencers sequencer NNS cord-339886-th1da1bb 195 46 . . . cord-339886-th1da1bb 196 1 Genome genome NN cord-339886-th1da1bb 196 2 sequencing sequencing NN cord-339886-th1da1bb 196 3 data datum NNS cord-339886-th1da1bb 196 4 coupled couple VBN cord-339886-th1da1bb 196 5 with with IN cord-339886-th1da1bb 196 6 rich rich JJ cord-339886-th1da1bb 196 7 metadata metadata NN cord-339886-th1da1bb 196 8 would would MD cord-339886-th1da1bb 196 9 then then RB cord-339886-th1da1bb 196 10 be be VB cord-339886-th1da1bb 196 11 released release VBN cord-339886-th1da1bb 196 12 in in IN cord-339886-th1da1bb 196 13 real real JJ cord-339886-th1da1bb 196 14 time time NN cord-339886-th1da1bb 196 15 to to IN cord-339886-th1da1bb 196 16 web web NN cord-339886-th1da1bb 196 17 - - HYPH cord-339886-th1da1bb 196 18 based base VBN cord-339886-th1da1bb 196 19 platforms platform NNS cord-339886-th1da1bb 196 20 , , , cord-339886-th1da1bb 196 21 such such JJ cord-339886-th1da1bb 196 22 as as IN cord-339886-th1da1bb 196 23 Virological Virological NNP cord-339886-th1da1bb 196 24 for for IN cord-339886-th1da1bb 196 25 colla colla NNP cord-339886-th1da1bb 196 26 borative borative NNP cord-339886-th1da1bb 196 27 analysis analysis NN cord-339886-th1da1bb 196 28 and and CC cord-339886-th1da1bb 196 29 Nextstrain Nextstrain NNP cord-339886-th1da1bb 196 30 for for IN cord-339886-th1da1bb 196 31 analysis analysis NN cord-339886-th1da1bb 196 32 and and CC cord-339886-th1da1bb 196 33 visualization visualization NN cord-339886-th1da1bb 196 34 96 96 CD cord-339886-th1da1bb 196 35 . . . cord-339886-th1da1bb 197 1 These these DT cord-339886-th1da1bb 197 2 sites site NNS cord-339886-th1da1bb 197 3 -already -already RB cord-339886-th1da1bb 197 4 used use VBN cord-339886-th1da1bb 197 5 in in IN cord-339886-th1da1bb 197 6 the the DT cord-339886-th1da1bb 197 7 Ebola Ebola NNP cord-339886-th1da1bb 197 8 and and CC cord-339886-th1da1bb 197 9 Zika Zika NNP cord-339886-th1da1bb 197 10 responses response NNS cord-339886-th1da1bb 197 11 -would -would WDT cord-339886-th1da1bb 197 12 act act NN cord-339886-th1da1bb 197 13 as as IN cord-339886-th1da1bb 197 14 the the DT cord-339886-th1da1bb 197 15 nexus nexus NN cord-339886-th1da1bb 197 16 for for IN cord-339886-th1da1bb 197 17 a a DT cord-339886-th1da1bb 197 18 global global JJ cord-339886-th1da1bb 197 19 network network NN cord-339886-th1da1bb 197 20 of of IN cord-339886-th1da1bb 197 21 interested interested JJ cord-339886-th1da1bb 197 22 parties party NNS cord-339886-th1da1bb 197 23 contributing contribute VBG cord-339886-th1da1bb 197 24 to to IN cord-339886-th1da1bb 197 25 real real JJ cord-339886-th1da1bb 197 26 - - HYPH cord-339886-th1da1bb 197 27 time time NN cord-339886-th1da1bb 197 28 phylo phylo NN cord-339886-th1da1bb 197 29 dynamic dynamic JJ cord-339886-th1da1bb 197 30 and and CC cord-339886-th1da1bb 197 31 epidemiological epidemiological JJ cord-339886-th1da1bb 197 32 analyses analysis NNS cord-339886-th1da1bb 197 33 and and CC cord-339886-th1da1bb 197 34 looking look VBG cord-339886-th1da1bb 197 35 for for IN cord-339886-th1da1bb 197 36 signals signal NNS cord-339886-th1da1bb 197 37 of of IN cord-339886-th1da1bb 197 38 spillover spillover NN cord-339886-th1da1bb 197 39 , , , cord-339886-th1da1bb 197 40 pathogen pathogen NN cord-339886-th1da1bb 197 41 population population NN cord-339886-th1da1bb 197 42 expansion expansion NN cord-339886-th1da1bb 197 43 and and CC cord-339886-th1da1bb 197 44 sustained sustained JJ cord-339886-th1da1bb 197 45 human human NN cord-339886-th1da1bb 197 46 - - HYPH cord-339886-th1da1bb 197 47 to to IN cord-339886-th1da1bb 197 48 - - HYPH cord-339886-th1da1bb 197 49 human human JJ cord-339886-th1da1bb 197 50 transmission transmission NN cord-339886-th1da1bb 197 51 . . . cord-339886-th1da1bb 198 1 Results result NNS cord-339886-th1da1bb 198 2 would would MD cord-339886-th1da1bb 198 3 be be VB cord-339886-th1da1bb 198 4 immediately immediately RB cord-339886-th1da1bb 198 5 shared share VBN cord-339886-th1da1bb 198 6 with with IN cord-339886-th1da1bb 198 7 the the DT cord-339886-th1da1bb 198 8 One One NNP cord-339886-th1da1bb 198 9 Health Health NNP cord-339886-th1da1bb 198 10 frontlineepidemiologists frontlineepidemiologist NNS cord-339886-th1da1bb 198 11 , , , cord-339886-th1da1bb 198 12 veterinarians veterinarian NNS cord-339886-th1da1bb 198 13 and and CC cord-339886-th1da1bb 198 14 community community NN cord-339886-th1da1bb 198 15 health health NN cord-339886-th1da1bb 198 16 workers worker NNS cord-339886-th1da1bb 198 17 -who -who : cord-339886-th1da1bb 198 18 would would MD cord-339886-th1da1bb 198 19 then then RB cord-339886-th1da1bb 198 20 implement implement VB cord-339886-th1da1bb 198 21 evidence evidence NN cord-339886-th1da1bb 198 22 - - HYPH cord-339886-th1da1bb 198 23 based base VBN cord-339886-th1da1bb 198 24 interventions intervention NNS cord-339886-th1da1bb 198 25 to to TO cord-339886-th1da1bb 198 26 mitigate mitigate VB cord-339886-th1da1bb 198 27 further further JJ cord-339886-th1da1bb 198 28 spread spread NN cord-339886-th1da1bb 198 29 . . . cord-339886-th1da1bb 199 1 The the DT cord-339886-th1da1bb 199 2 pathway pathway NN cord-339886-th1da1bb 199 3 to to IN cord-339886-th1da1bb 199 4 such such PDT cord-339886-th1da1bb 199 5 a a DT cord-339886-th1da1bb 199 6 reality reality NN cord-339886-th1da1bb 199 7 is be VBZ cord-339886-th1da1bb 199 8 not not RB cord-339886-th1da1bb 199 9 without without IN cord-339886-th1da1bb 199 10 its -PRON- PRP$ cord-339886-th1da1bb 199 11 roadblocks roadblock NNS cord-339886-th1da1bb 199 12 . . . cord-339886-th1da1bb 200 1 Apart apart RB cord-339886-th1da1bb 200 2 from from IN cord-339886-th1da1bb 200 3 technical technical JJ cord-339886-th1da1bb 200 4 and and CC cord-339886-th1da1bb 200 5 implementation implementation NN cord-339886-th1da1bb 200 6 challenges challenge NNS cord-339886-th1da1bb 200 7 , , , cord-339886-th1da1bb 200 8 a a DT cord-339886-th1da1bb 200 9 series series NN cord-339886-th1da1bb 200 10 of of IN cord-339886-th1da1bb 200 11 larger large JJR cord-339886-th1da1bb 200 12 concerns concern NNS cord-339886-th1da1bb 200 13 surrounds surround VBZ cord-339886-th1da1bb 200 14 the the DT cord-339886-th1da1bb 200 15 rollout rollout NN cord-339886-th1da1bb 200 16 of of IN cord-339886-th1da1bb 200 17 genomics genomic NNS cord-339886-th1da1bb 200 18 - - HYPH cord-339886-th1da1bb 200 19 based base VBN cord-339886-th1da1bb 200 20 rapid rapid JJ cord-339886-th1da1bb 200 21 outbreak outbreak NN cord-339886-th1da1bb 200 22 response response NN cord-339886-th1da1bb 200 23 , , , cord-339886-th1da1bb 200 24 ranging range VBG cord-339886-th1da1bb 200 25 from from IN cord-339886-th1da1bb 200 26 the the DT cord-339886-th1da1bb 200 27 uptake uptake NN cord-339886-th1da1bb 200 28 of of IN cord-339886-th1da1bb 200 29 a a DT cord-339886-th1da1bb 200 30 new new JJ cord-339886-th1da1bb 200 31 , , , cord-339886-th1da1bb 200 32 disruptive disruptive JJ cord-339886-th1da1bb 200 33 technology technology NN cord-339886-th1da1bb 200 34 to to IN cord-339886-th1da1bb 200 35 effecting effect VBG cord-339886-th1da1bb 200 36 systems system NNS cord-339886-th1da1bb 200 37 - - HYPH cord-339886-th1da1bb 200 38 level level NN cord-339886-th1da1bb 200 39 change change NN cord-339886-th1da1bb 200 40 on on IN cord-339886-th1da1bb 200 41 a a DT cord-339886-th1da1bb 200 42 global global JJ cord-339886-th1da1bb 200 43 scale scale NN cord-339886-th1da1bb 200 44 . . . cord-339886-th1da1bb 201 1 Sequencing sequencing NN cord-339886-th1da1bb 201 2 - - HYPH cord-339886-th1da1bb 201 3 based base VBN cord-339886-th1da1bb 201 4 diagnostics diagnostic NNS cord-339886-th1da1bb 201 5 , , , cord-339886-th1da1bb 201 6 particularly particularly RB cord-339886-th1da1bb 201 7 clinical clinical JJ cord-339886-th1da1bb 201 8 metagenomics metagenomic NNS cord-339886-th1da1bb 201 9 approaches approach NNS cord-339886-th1da1bb 201 10 , , , cord-339886-th1da1bb 201 11 are be VBP cord-339886-th1da1bb 201 12 still still RB cord-339886-th1da1bb 201 13 straddling straddle VBG cord-339886-th1da1bb 201 14 the the DT cord-339886-th1da1bb 201 15 boundary boundary NN cord-339886-th1da1bb 201 16 between between IN cord-339886-th1da1bb 201 17 research research NN cord-339886-th1da1bb 201 18 and and CC cord-339886-th1da1bb 201 19 clinical clinical JJ cord-339886-th1da1bb 201 20 use use NN cord-339886-th1da1bb 201 21 . . . cord-339886-th1da1bb 202 1 In in IN cord-339886-th1da1bb 202 2 this this DT cord-339886-th1da1bb 202 3 realm realm NN cord-339886-th1da1bb 202 4 , , , cord-339886-th1da1bb 202 5 uncertainty uncertainty NN cord-339886-th1da1bb 202 6 is be VBZ cord-339886-th1da1bb 202 7 a a DT cord-339886-th1da1bb 202 8 certainty certainty NN cord-339886-th1da1bb 202 9 , , , cord-339886-th1da1bb 202 10 be be VB cord-339886-th1da1bb 202 11 it -PRON- PRP cord-339886-th1da1bb 202 12 uncertainty uncertainty NN cord-339886-th1da1bb 202 13 inherent inherent JJ cord-339886-th1da1bb 202 14 to to IN cord-339886-th1da1bb 202 15 the the DT cord-339886-th1da1bb 202 16 technology technology NN cord-339886-th1da1bb 202 17 itself -PRON- PRP cord-339886-th1da1bb 202 18 or or CC cord-339886-th1da1bb 202 19 informational informational JJ cord-339886-th1da1bb 202 20 uncertainty uncertainty NN cord-339886-th1da1bb 202 21 , , , cord-339886-th1da1bb 202 22 such such JJ cord-339886-th1da1bb 202 23 as as IN cord-339886-th1da1bb 202 24 how how WRB cord-339886-th1da1bb 202 25 accurate accurate JJ cord-339886-th1da1bb 202 26 , , , cord-339886-th1da1bb 202 27 complete complete JJ cord-339886-th1da1bb 202 28 and and CC cord-339886-th1da1bb 202 29 reliable reliable JJ cord-339886-th1da1bb 202 30 results result NNS cord-339886-th1da1bb 202 31 actually actually RB cord-339886-th1da1bb 202 32 are be VBP cord-339886-th1da1bb 202 33 97 97 CD cord-339886-th1da1bb 202 34 . . . cord-339886-th1da1bb 203 1 Early early JJ cord-339886-th1da1bb 203 2 adopters adopter NNS cord-339886-th1da1bb 203 3 of of IN cord-339886-th1da1bb 203 4 genomics genomic NNS cord-339886-th1da1bb 203 5 in in IN cord-339886-th1da1bb 203 6 the the DT cord-339886-th1da1bb 203 7 academic academic JJ cord-339886-th1da1bb 203 8 domain domain NN cord-339886-th1da1bb 203 9 are be VBP cord-339886-th1da1bb 203 10 used use VBN cord-339886-th1da1bb 203 11 to to IN cord-339886-th1da1bb 203 12 uncertainty uncertainty NN cord-339886-th1da1bb 203 13 , , , cord-339886-th1da1bb 203 14 often often RB cord-339886-th1da1bb 203 15 acknowledging acknowledge VBG cord-339886-th1da1bb 203 16 and and CC cord-339886-th1da1bb 203 17 appraising appraise VBG cord-339886-th1da1bb 203 18 it -PRON- PRP cord-339886-th1da1bb 203 19 , , , cord-339886-th1da1bb 203 20 but but CC cord-339886-th1da1bb 203 21 routine routine JJ cord-339886-th1da1bb 203 22 clinical clinical JJ cord-339886-th1da1bb 203 23 use use NN cord-339886-th1da1bb 203 24 requires require VBZ cord-339886-th1da1bb 203 25 meeting meet VBG cord-339886-th1da1bb 203 26 the the DT cord-339886-th1da1bb 203 27 evidentiary evidentiary JJ cord-339886-th1da1bb 203 28 thresholds threshold NNS cord-339886-th1da1bb 203 29 mandated mandate VBN cord-339886-th1da1bb 203 30 by by IN cord-339886-th1da1bb 203 31 a a DT cord-339886-th1da1bb 203 32 range range NN cord-339886-th1da1bb 203 33 of of IN cord-339886-th1da1bb 203 34 stakeholders stakeholder NNS cord-339886-th1da1bb 203 35 , , , cord-339886-th1da1bb 203 36 from from IN cord-339886-th1da1bb 203 37 regulators regulator NNS cord-339886-th1da1bb 203 38 to to IN cord-339886-th1da1bb 203 39 the the DT cord-339886-th1da1bb 203 40 laboratories laboratory NNS cord-339886-th1da1bb 203 41 implementing implement VBG cord-339886-th1da1bb 203 42 new new JJ cord-339886-th1da1bb 203 43 sequencing sequencing NN cord-339886-th1da1bb 203 44 - - HYPH cord-339886-th1da1bb 203 45 based base VBN cord-339886-th1da1bb 203 46 tests test NNS cord-339886-th1da1bb 203 47 . . . cord-339886-th1da1bb 204 1 Decision decision NN cord-339886-th1da1bb 204 2 criteria criterion NNS cord-339886-th1da1bb 204 3 that that WDT cord-339886-th1da1bb 204 4 influence influence VBP cord-339886-th1da1bb 204 5 whether whether IN cord-339886-th1da1bb 204 6 a a DT cord-339886-th1da1bb 204 7 new new JJ cord-339886-th1da1bb 204 8 genomic genomic JJ cord-339886-th1da1bb 204 9 test test NN cord-339886-th1da1bb 204 10 is be VBZ cord-339886-th1da1bb 204 11 adopted adopt VBN cord-339886-th1da1bb 204 12 include include VBP cord-339886-th1da1bb 204 13 the the DT cord-339886-th1da1bb 204 14 ability ability NN cord-339886-th1da1bb 204 15 of of IN cord-339886-th1da1bb 204 16 the the DT cord-339886-th1da1bb 204 17 assay assay NN cord-339886-th1da1bb 204 18 to to TO cord-339886-th1da1bb 204 19 differentiate differentiate VB cord-339886-th1da1bb 204 20 pathogens pathogen NNS cord-339886-th1da1bb 204 21 from from IN cord-339886-th1da1bb 204 22 commensals commensal NNS cord-339886-th1da1bb 204 23 , , , cord-339886-th1da1bb 204 24 the the DT cord-339886-th1da1bb 204 25 correlation correlation NN cord-339886-th1da1bb 204 26 of of IN cord-339886-th1da1bb 204 27 pathogen pathogen NN cord-339886-th1da1bb 204 28 presence presence NN cord-339886-th1da1bb 204 29 with with IN cord-339886-th1da1bb 204 30 disease disease NN cord-339886-th1da1bb 204 31 , , , cord-339886-th1da1bb 204 32 the the DT cord-339886-th1da1bb 204 33 sensitivity sensitivity NN cord-339886-th1da1bb 204 34 and and CC cord-339886-th1da1bb 204 35 specificity specificity NN cord-339886-th1da1bb 204 36 of of IN cord-339886-th1da1bb 204 37 the the DT cord-339886-th1da1bb 204 38 test test NN cord-339886-th1da1bb 204 39 , , , cord-339886-th1da1bb 204 40 its -PRON- PRP$ cord-339886-th1da1bb 204 41 reproducibility reproducibility NN cord-339886-th1da1bb 204 42 and and CC cord-339886-th1da1bb 204 43 robustness robustness NN cord-339886-th1da1bb 204 44 across across IN cord-339886-th1da1bb 204 45 sample sample NN cord-339886-th1da1bb 204 46 types type NNS cord-339886-th1da1bb 204 47 and and CC cord-339886-th1da1bb 204 48 settings setting NNS cord-339886-th1da1bb 204 49 and and CC cord-339886-th1da1bb 204 50 a a DT cord-339886-th1da1bb 204 51 cost cost NN cord-339886-th1da1bb 204 52 comparable comparable JJ cord-339886-th1da1bb 204 53 to to IN cord-339886-th1da1bb 204 54 that that DT cord-339886-th1da1bb 204 55 of of IN cord-339886-th1da1bb 204 56 existing exist VBG cord-339886-th1da1bb 204 57 platforms platform NNS cord-339886-th1da1bb 204 58 98 98 CD cord-339886-th1da1bb 204 59 . . . cord-339886-th1da1bb 205 1 Validation validation NN cord-339886-th1da1bb 205 2 -defining -defining . cord-339886-th1da1bb 206 1 the the DT cord-339886-th1da1bb 206 2 conditions condition NNS cord-339886-th1da1bb 206 3 needed need VBD cord-339886-th1da1bb 206 4 to to TO cord-339886-th1da1bb 206 5 obtain obtain VB cord-339886-th1da1bb 206 6 reliable reliable JJ cord-339886-th1da1bb 206 7 results result NNS cord-339886-th1da1bb 206 8 from from IN cord-339886-th1da1bb 206 9 an an DT cord-339886-th1da1bb 206 10 assay assay NN cord-339886-th1da1bb 206 11 , , , cord-339886-th1da1bb 206 12 evaluating evaluate VBG cord-339886-th1da1bb 206 13 the the DT cord-339886-th1da1bb 206 14 performance performance NN cord-339886-th1da1bb 206 15 of of IN cord-339886-th1da1bb 206 16 the the DT cord-339886-th1da1bb 206 17 assay assay NN cord-339886-th1da1bb 206 18 under under IN cord-339886-th1da1bb 206 19 said say VBN cord-339886-th1da1bb 206 20 conditions condition NNS cord-339886-th1da1bb 206 21 and and CC cord-339886-th1da1bb 206 22 specifying specify VBG cord-339886-th1da1bb 206 23 how how WRB cord-339886-th1da1bb 206 24 the the DT cord-339886-th1da1bb 206 25 results result NNS cord-339886-th1da1bb 206 26 should should MD cord-339886-th1da1bb 206 27 be be VB cord-339886-th1da1bb 206 28 interpreted interpret VBN cord-339886-th1da1bb 206 29 , , , cord-339886-th1da1bb 206 30 including include VBG cord-339886-th1da1bb 206 31 outlining outline VBG cord-339886-th1da1bb 206 32 limitations limitation NNS cord-339886-th1da1bb 206 33 99 99 CD cord-339886-th1da1bb 206 34 -is -is NFP cord-339886-th1da1bb 206 35 also also RB cord-339886-th1da1bb 206 36 critical critical JJ cord-339886-th1da1bb 206 37 . . . cord-339886-th1da1bb 207 1 Much much JJ cord-339886-th1da1bb 207 2 can can MD cord-339886-th1da1bb 207 3 be be VB cord-339886-th1da1bb 207 4 learned learn VBN cord-339886-th1da1bb 207 5 from from IN cord-339886-th1da1bb 207 6 the the DT cord-339886-th1da1bb 207 7 domain domain NN cord-339886-th1da1bb 207 8 of of IN cord-339886-th1da1bb 207 9 microbial microbial JJ cord-339886-th1da1bb 207 10 forensics forensic NNS cord-339886-th1da1bb 207 11 , , , cord-339886-th1da1bb 207 12 where where WRB cord-339886-th1da1bb 207 13 sequencing sequencing NN cord-339886-th1da1bb 207 14 is be VBZ cord-339886-th1da1bb 207 15 playing play VBG cord-339886-th1da1bb 207 16 a a DT cord-339886-th1da1bb 207 17 large large JJ cord-339886-th1da1bb 207 18 part part NN cord-339886-th1da1bb 207 19 100 100 CD cord-339886-th1da1bb 207 20 . . . cord-339886-th1da1bb 208 1 Budowle Budowle NNP cord-339886-th1da1bb 208 2 et et FW cord-339886-th1da1bb 208 3 al al NNP cord-339886-th1da1bb 208 4 . . . cord-339886-th1da1bb 209 1 review review NN cord-339886-th1da1bb 209 2 validation validation NN cord-339886-th1da1bb 209 3 considerations consideration NNS cord-339886-th1da1bb 209 4 for for IN cord-339886-th1da1bb 209 5 NGS NGS NNP cord-339886-th1da1bb 209 6 101 101 CD cord-339886-th1da1bb 209 7 , , , cord-339886-th1da1bb 209 8 noting note VBG cord-339886-th1da1bb 209 9 that that IN cord-339886-th1da1bb 209 10 this this DT cord-339886-th1da1bb 209 11 technology technology NN cord-339886-th1da1bb 209 12 requires require VBZ cord-339886-th1da1bb 209 13 validating validate VBG cord-339886-th1da1bb 209 14 sample sample NN cord-339886-th1da1bb 209 15 preparation preparation NN cord-339886-th1da1bb 209 16 protocols protocol NNS cord-339886-th1da1bb 209 17 , , , cord-339886-th1da1bb 209 18 including include VBG cord-339886-th1da1bb 209 19 extraction extraction NN cord-339886-th1da1bb 209 20 , , , cord-339886-th1da1bb 209 21 enrichment enrichment NN cord-339886-th1da1bb 209 22 and and CC cord-339886-th1da1bb 209 23 library library NN cord-339886-th1da1bb 209 24 preparation preparation NN cord-339886-th1da1bb 209 25 steps step NNS cord-339886-th1da1bb 209 26 , , , cord-339886-th1da1bb 209 27 sequencing sequence VBG cord-339886-th1da1bb 209 28 protocols protocol NNS cord-339886-th1da1bb 209 29 , , , cord-339886-th1da1bb 209 30 and and CC cord-339886-th1da1bb 209 31 downstream downstream JJ cord-339886-th1da1bb 209 32 bioinformatics bioinformatics NN cord-339886-th1da1bb 209 33 analyses analysis NNS cord-339886-th1da1bb 209 34 , , , cord-339886-th1da1bb 209 35 including include VBG cord-339886-th1da1bb 209 36 alignment alignment NN cord-339886-th1da1bb 209 37 and and CC cord-339886-th1da1bb 209 38 assembly assembly NN cord-339886-th1da1bb 209 39 , , , cord-339886-th1da1bb 209 40 variant variant NN cord-339886-th1da1bb 209 41 calling calling NN cord-339886-th1da1bb 209 42 , , , cord-339886-th1da1bb 209 43 the the DT cord-339886-th1da1bb 209 44 underlying underlying JJ cord-339886-th1da1bb 209 45 reference reference NN cord-339886-th1da1bb 209 46 databases database NNS cord-339886-th1da1bb 209 47 and and CC cord-339886-th1da1bb 209 48 software software NN cord-339886-th1da1bb 209 49 tools tool NNS cord-339886-th1da1bb 209 50 and and CC cord-339886-th1da1bb 209 51 the the DT cord-339886-th1da1bb 209 52 interpretation interpretation NN cord-339886-th1da1bb 209 53 of of IN cord-339886-th1da1bb 209 54 the the DT cord-339886-th1da1bb 209 55 data datum NNS cord-339886-th1da1bb 209 56 . . . cord-339886-th1da1bb 210 1 Complete complete JJ cord-339886-th1da1bb 210 2 validation validation NN cord-339886-th1da1bb 210 3 of of IN cord-339886-th1da1bb 210 4 a a DT cord-339886-th1da1bb 210 5 sequencing sequencing NN cord-339886-th1da1bb 210 6 assay assay NN cord-339886-th1da1bb 210 7 may may MD cord-339886-th1da1bb 210 8 not not RB cord-339886-th1da1bb 210 9 always always RB cord-339886-th1da1bb 210 10 be be VB cord-339886-th1da1bb 210 11 possible possible JJ cord-339886-th1da1bb 210 12 , , , cord-339886-th1da1bb 210 13 particularly particularly RB cord-339886-th1da1bb 210 14 for for IN cord-339886-th1da1bb 210 15 emerging emerge VBG cord-339886-th1da1bb 210 16 patho patho FW cord-339886-th1da1bb 210 17 gens gen NNS cord-339886-th1da1bb 210 18 . . . cord-339886-th1da1bb 211 1 Therefore therefore RB cord-339886-th1da1bb 211 2 , , , cord-339886-th1da1bb 211 3 just just RB cord-339886-th1da1bb 211 4 as as IN cord-339886-th1da1bb 211 5 the the DT cord-339886-th1da1bb 211 6 West west JJ cord-339886-th1da1bb 211 7 African African NNP cord-339886-th1da1bb 211 8 Ebola Ebola NNP cord-339886-th1da1bb 211 9 virus virus NN cord-339886-th1da1bb 211 10 outbreak outbreak NN cord-339886-th1da1bb 211 11 triggered trigger VBD cord-339886-th1da1bb 211 12 a a DT cord-339886-th1da1bb 211 13 review review NN cord-339886-th1da1bb 211 14 of of IN cord-339886-th1da1bb 211 15 the the DT cord-339886-th1da1bb 211 16 ethical ethical JJ cord-339886-th1da1bb 211 17 context context NN cord-339886-th1da1bb 211 18 for for IN cord-339886-th1da1bb 211 19 trialling trialle VBG cord-339886-th1da1bb 211 20 new new JJ cord-339886-th1da1bb 211 21 therapeutics therapeutic NNS cord-339886-th1da1bb 211 22 and and CC cord-339886-th1da1bb 211 23 vaccines vaccine NNS cord-339886-th1da1bb 211 24 102 102 CD cord-339886-th1da1bb 211 25 , , , cord-339886-th1da1bb 211 26 the the DT cord-339886-th1da1bb 211 27 scale scale NN cord-339886-th1da1bb 211 28 - - HYPH cord-339886-th1da1bb 211 29 up up NN cord-339886-th1da1bb 211 30 of of IN cord-339886-th1da1bb 211 31 NGS NGS NNP cord-339886-th1da1bb 211 32 in in IN cord-339886-th1da1bb 211 33 emerging emerge VBG cord-339886-th1da1bb 211 34 epidemics epidemic NNS cord-339886-th1da1bb 211 35 will will MD cord-339886-th1da1bb 211 36 engender engender VB cord-339886-th1da1bb 211 37 similar similar JJ cord-339886-th1da1bb 211 38 conversations conversation NNS cord-339886-th1da1bb 211 39 . . . cord-339886-th1da1bb 212 1 Rather rather RB cord-339886-th1da1bb 212 2 than than IN cord-339886-th1da1bb 212 3 wait wait VB cord-339886-th1da1bb 212 4 for for IN cord-339886-th1da1bb 212 5 this this DT cord-339886-th1da1bb 212 6 to to TO cord-339886-th1da1bb 212 7 happen happen VB cord-339886-th1da1bb 212 8 , , , cord-339886-th1da1bb 212 9 an an DT cord-339886-th1da1bb 212 10 anticipatory anticipatory JJ cord-339886-th1da1bb 212 11 approach approach NN cord-339886-th1da1bb 212 12 is be VBZ cord-339886-th1da1bb 212 13 best good JJS cord-339886-th1da1bb 212 14 , , , cord-339886-th1da1bb 212 15 outlining outline VBG cord-339886-th1da1bb 212 16 the the DT cord-339886-th1da1bb 212 17 exceptional exceptional JJ cord-339886-th1da1bb 212 18 circumstances circumstance NNS cord-339886-th1da1bb 212 19 under under IN cord-339886-th1da1bb 212 20 which which WDT cord-339886-th1da1bb 212 21 unvalidated unvalidated JJ cord-339886-th1da1bb 212 22 approaches approach NNS cord-339886-th1da1bb 212 23 might may MD cord-339886-th1da1bb 212 24 be be VB cord-339886-th1da1bb 212 25 used use VBN cord-339886-th1da1bb 212 26 , , , cord-339886-th1da1bb 212 27 selecting select VBG cord-339886-th1da1bb 212 28 the the DT cord-339886-th1da1bb 212 29 appropriate appropriate JJ cord-339886-th1da1bb 212 30 approach approach NN cord-339886-th1da1bb 212 31 and and CC cord-339886-th1da1bb 212 32 examining examine VBG cord-339886-th1da1bb 212 33 the the DT cord-339886-th1da1bb 212 34 benefits benefit NNS cord-339886-th1da1bb 212 35 of of IN cord-339886-th1da1bb 212 36 a a DT cord-339886-th1da1bb 212 37 potentially potentially RB cord-339886-th1da1bb 212 38 untested untested JJ cord-339886-th1da1bb 212 39 approach approach NN cord-339886-th1da1bb 212 40 in in IN cord-339886-th1da1bb 212 41 light light NN cord-339886-th1da1bb 212 42 of of IN cord-339886-th1da1bb 212 43 individual individual JJ cord-339886-th1da1bb 212 44 and and CC cord-339886-th1da1bb 212 45 societal societal JJ cord-339886-th1da1bb 212 46 interests interest NNS cord-339886-th1da1bb 212 47 . . . cord-339886-th1da1bb 213 1 If if IN cord-339886-th1da1bb 213 2 the the DT cord-339886-th1da1bb 213 3 social social JJ cord-339886-th1da1bb 213 4 landscape landscape NN cord-339886-th1da1bb 213 5 surrounding surround VBG cord-339886-th1da1bb 213 6 the the DT cord-339886-th1da1bb 213 7 introduction introduction NN cord-339886-th1da1bb 213 8 of of IN cord-339886-th1da1bb 213 9 a a DT cord-339886-th1da1bb 213 10 new new JJ cord-339886-th1da1bb 213 11 technology technology NN cord-339886-th1da1bb 213 12 is be VBZ cord-339886-th1da1bb 213 13 not not RB cord-339886-th1da1bb 213 14 considered consider VBN cord-339886-th1da1bb 213 15 , , , cord-339886-th1da1bb 213 16 prior prior JJ cord-339886-th1da1bb 213 17 experience experience NN cord-339886-th1da1bb 213 18 suggests suggest VBZ cord-339886-th1da1bb 213 19 that that IN cord-339886-th1da1bb 213 20 the the DT cord-339886-th1da1bb 213 21 road road NN cord-339886-th1da1bb 213 22 to to IN cord-339886-th1da1bb 213 23 implementation implementation NN cord-339886-th1da1bb 213 24 will will MD cord-339886-th1da1bb 213 25 be be VB cord-339886-th1da1bb 213 26 difficult difficult JJ cord-339886-th1da1bb 213 27 , , , cord-339886-th1da1bb 213 28 with with IN cord-339886-th1da1bb 213 29 hurdles hurdle NNS cord-339886-th1da1bb 213 30 ranging range VBG cord-339886-th1da1bb 213 31 from from IN cord-339886-th1da1bb 213 32 public public JJ cord-339886-th1da1bb 213 33 mistrust mistrust NN cord-339886-th1da1bb 213 34 to to IN cord-339886-th1da1bb 213 35 moratoria moratorium NNS cord-339886-th1da1bb 213 36 on on IN cord-339886-th1da1bb 213 37 research research NN cord-339886-th1da1bb 213 38 103 103 CD cord-339886-th1da1bb 213 39 . . . cord-339886-th1da1bb 214 1 The the DT cord-339886-th1da1bb 214 2 enthusiasm enthusiasm NN cord-339886-th1da1bb 214 3 of of IN cord-339886-th1da1bb 214 4 the the DT cord-339886-th1da1bb 214 5 scientific scientific JJ cord-339886-th1da1bb 214 6 community community NN cord-339886-th1da1bb 214 7 for for IN cord-339886-th1da1bb 214 8 new new JJ cord-339886-th1da1bb 214 9 technology technology NN cord-339886-th1da1bb 214 10 must must MD cord-339886-th1da1bb 214 11 not not RB cord-339886-th1da1bb 214 12 lead lead VB cord-339886-th1da1bb 214 13 to to IN cord-339886-th1da1bb 214 14 inflated inflated JJ cord-339886-th1da1bb 214 15 claims claim NNS cord-339886-th1da1bb 214 16 of of IN cord-339886-th1da1bb 214 17 clinical clinical JJ cord-339886-th1da1bb 214 18 utility utility NN cord-339886-th1da1bb 214 19 and and CC cord-339886-th1da1bb 214 20 poor poor JJ cord-339886-th1da1bb 214 21 downstream downstream JJ cord-339886-th1da1bb 214 22 decisions decision NNS cord-339886-th1da1bb 214 23 around around IN cord-339886-th1da1bb 214 24 the the DT cord-339886-th1da1bb 214 25 deployment deployment NN cord-339886-th1da1bb 214 26 of of IN cord-339886-th1da1bb 214 27 that that DT cord-339886-th1da1bb 214 28 technology technology NN cord-339886-th1da1bb 214 29 . . . cord-339886-th1da1bb 215 1 Howard Howard NNP cord-339886-th1da1bb 215 2 et et NNP cord-339886-th1da1bb 215 3 al al NNP cord-339886-th1da1bb 215 4 . . . cord-339886-th1da1bb 216 1 outline outline VB cord-339886-th1da1bb 216 2 several several JJ cord-339886-th1da1bb 216 3 principles principle NNS cord-339886-th1da1bb 216 4 for for IN cord-339886-th1da1bb 216 5 successfully successfully RB cord-339886-th1da1bb 216 6 integrating integrate VBG cord-339886-th1da1bb 216 7 genomics genomic NNS cord-339886-th1da1bb 216 8 into into IN cord-339886-th1da1bb 216 9 the the DT cord-339886-th1da1bb 216 10 public public JJ cord-339886-th1da1bb 216 11 health health NN cord-339886-th1da1bb 216 12 system system NN cord-339886-th1da1bb 216 13 , , , cord-339886-th1da1bb 216 14 and and CC cord-339886-th1da1bb 216 15 as as IN cord-339886-th1da1bb 216 16 we -PRON- PRP cord-339886-th1da1bb 216 17 pilot pilot VBP cord-339886-th1da1bb 216 18 digital digital JJ cord-339886-th1da1bb 216 19 pathogen pathogen NN cord-339886-th1da1bb 216 20 surveillance surveillance NN cord-339886-th1da1bb 216 21 , , , cord-339886-th1da1bb 216 22 the the DT cord-339886-th1da1bb 216 23 community community NN cord-339886-th1da1bb 216 24 would would MD cord-339886-th1da1bb 216 25 do do VB cord-339886-th1da1bb 216 26 well well RB cord-339886-th1da1bb 216 27 to to TO cord-339886-th1da1bb 216 28 keep keep VB cord-339886-th1da1bb 216 29 many many JJ cord-339886-th1da1bb 216 30 of of IN cord-339886-th1da1bb 216 31 them -PRON- PRP cord-339886-th1da1bb 216 32 in in IN cord-339886-th1da1bb 216 33 mind mind NN cord-339886-th1da1bb 216 34 : : : cord-339886-th1da1bb 216 35 ensuring ensure VBG cord-339886-th1da1bb 216 36 that that IN cord-339886-th1da1bb 216 37 the the DT cord-339886-th1da1bb 216 38 instruments instrument NNS cord-339886-th1da1bb 216 39 and and CC cord-339886-th1da1bb 216 40 processes process NNS cord-339886-th1da1bb 216 41 used use VBN cord-339886-th1da1bb 216 42 are be VBP cord-339886-th1da1bb 216 43 reliable reliable JJ cord-339886-th1da1bb 216 44 and and CC cord-339886-th1da1bb 216 45 that that IN cord-339886-th1da1bb 216 46 reporting reporting NN cord-339886-th1da1bb 216 47 is be VBZ cord-339886-th1da1bb 216 48 standardized standardize VBN cord-339886-th1da1bb 216 49 and and CC cord-339886-th1da1bb 216 50 readily readily RB cord-339886-th1da1bb 216 51 interpretable interpretable JJ cord-339886-th1da1bb 216 52 by by IN cord-339886-th1da1bb 216 53 end end NN cord-339886-th1da1bb 216 54 users user NNS cord-339886-th1da1bb 216 55 ; ; : cord-339886-th1da1bb 216 56 that that IN cord-339886-th1da1bb 216 57 the the DT cord-339886-th1da1bb 216 58 technology technology NN cord-339886-th1da1bb 216 59 is be VBZ cord-339886-th1da1bb 216 60 used use VBN cord-339886-th1da1bb 216 61 to to TO cord-339886-th1da1bb 216 62 address address VB cord-339886-th1da1bb 216 63 important important JJ cord-339886-th1da1bb 216 64 health health NN cord-339886-th1da1bb 216 65 problems problem NNS cord-339886-th1da1bb 216 66 ; ; : cord-339886-th1da1bb 216 67 that that IN cord-339886-th1da1bb 216 68 the the DT cord-339886-th1da1bb 216 69 advantages advantage NNS cord-339886-th1da1bb 216 70 of of IN cord-339886-th1da1bb 216 71 the the DT cord-339886-th1da1bb 216 72 approach approach NN cord-339886-th1da1bb 216 73 outweigh outweigh VBP cord-339886-th1da1bb 216 74 the the DT cord-339886-th1da1bb 216 75 disadvantages disadvantage NNS cord-339886-th1da1bb 216 76 ; ; : cord-339886-th1da1bb 216 77 and and CC cord-339886-th1da1bb 216 78 that that IN cord-339886-th1da1bb 216 79 economic economic JJ cord-339886-th1da1bb 216 80 evaluation evaluation NN cord-339886-th1da1bb 216 81 suggests suggest VBZ cord-339886-th1da1bb 216 82 savings saving NNS cord-339886-th1da1bb 216 83 to to IN cord-339886-th1da1bb 216 84 the the DT cord-339886-th1da1bb 216 85 health health NN cord-339886-th1da1bb 216 86 care care NN cord-339886-th1da1bb 216 87 system system NN cord-339886-th1da1bb 216 88 and and CC cord-339886-th1da1bb 216 89 society society NN cord-339886-th1da1bb 216 90 104 104 CD cord-339886-th1da1bb 216 91 . . . cord-339886-th1da1bb 217 1 It -PRON- PRP cord-339886-th1da1bb 217 2 is be VBZ cord-339886-th1da1bb 217 3 also also RB cord-339886-th1da1bb 217 4 important important JJ cord-339886-th1da1bb 217 5 to to TO cord-339886-th1da1bb 217 6 reconsider reconsider VB cord-339886-th1da1bb 217 7 the the DT cord-339886-th1da1bb 217 8 role role NN cord-339886-th1da1bb 217 9 of of IN cord-339886-th1da1bb 217 10 the the DT cord-339886-th1da1bb 217 11 diagnostic diagnostic JJ cord-339886-th1da1bb 217 12 reference reference NN cord-339886-th1da1bb 217 13 laboratory laboratory NN cord-339886-th1da1bb 217 14 in in IN cord-339886-th1da1bb 217 15 the the DT cord-339886-th1da1bb 217 16 new new JJ cord-339886-th1da1bb 217 17 genomic genomic JJ cord-339886-th1da1bb 217 18 landscape landscape NN cord-339886-th1da1bb 217 19 . . . cord-339886-th1da1bb 218 1 As as IN cord-339886-th1da1bb 218 2 their -PRON- PRP$ cord-339886-th1da1bb 218 3 mandates mandate NNS cord-339886-th1da1bb 218 4 expand expand VBP cord-339886-th1da1bb 218 5 to to TO cord-339886-th1da1bb 218 6 include include VB cord-339886-th1da1bb 218 7 enhanced enhanced JJ cord-339886-th1da1bb 218 8 surveillance surveillance NN cord-339886-th1da1bb 218 9 and and CC cord-339886-th1da1bb 218 10 closer close JJR cord-339886-th1da1bb 218 11 collaboration collaboration NN cord-339886-th1da1bb 218 12 with with IN cord-339886-th1da1bb 218 13 field field NN cord-339886-th1da1bb 218 14 epidemiologists epidemiologist NNS cord-339886-th1da1bb 218 15 , , , cord-339886-th1da1bb 218 16 laboratory laboratory NN cord-339886-th1da1bb 218 17 directors director NNS cord-339886-th1da1bb 218 18 will will MD cord-339886-th1da1bb 218 19 face face VB cord-339886-th1da1bb 218 20 new new JJ cord-339886-th1da1bb 218 21 challenges challenge NNS cord-339886-th1da1bb 218 22 , , , cord-339886-th1da1bb 218 23 from from IN cord-339886-th1da1bb 218 24 managing manage VBG cord-339886-th1da1bb 218 25 exploratory exploratory JJ cord-339886-th1da1bb 218 26 work work NN cord-339886-th1da1bb 218 27 alongside alongside IN cord-339886-th1da1bb 218 28 routine routine JJ cord-339886-th1da1bb 218 29 clinical clinical JJ cord-339886-th1da1bb 218 30 care care NN cord-339886-th1da1bb 218 31 to to IN cord-339886-th1da1bb 218 32 hiring hire VBG cord-339886-th1da1bb 218 33 a a DT cord-339886-th1da1bb 218 34 new new JJ cord-339886-th1da1bb 218 35 sort sort NN cord-339886-th1da1bb 218 36 of of IN cord-339886-th1da1bb 218 37 technologist technologist NN cord-339886-th1da1bb 218 38 , , , cord-339886-th1da1bb 218 39 one one CD cord-339886-th1da1bb 218 40 with with IN cord-339886-th1da1bb 218 41 basic basic JJ cord-339886-th1da1bb 218 42 genomics genomic NNS cord-339886-th1da1bb 218 43 and and CC cord-339886-th1da1bb 218 44 epidemiology epidemiology NN cord-339886-th1da1bb 218 45 training training NN cord-339886-th1da1bb 218 46 . . . cord-339886-th1da1bb 219 1 The the DT cord-339886-th1da1bb 219 2 ethical ethical JJ cord-339886-th1da1bb 219 3 , , , cord-339886-th1da1bb 219 4 social social JJ cord-339886-th1da1bb 219 5 and and CC cord-339886-th1da1bb 219 6 legal legal JJ cord-339886-th1da1bb 219 7 implications implication NNS cord-339886-th1da1bb 219 8 of of IN cord-339886-th1da1bb 219 9 digital digital JJ cord-339886-th1da1bb 219 10 pathogen pathogen NN cord-339886-th1da1bb 219 11 surveillance surveillance NN cord-339886-th1da1bb 219 12 are be VBP cord-339886-th1da1bb 219 13 an an DT cord-339886-th1da1bb 219 14 emerging emerge VBG cord-339886-th1da1bb 219 15 area area NN cord-339886-th1da1bb 219 16 of of IN cord-339886-th1da1bb 219 17 research research NN cord-339886-th1da1bb 219 18 ( ( -LRB- cord-339886-th1da1bb 219 19 reviewed review VBN cord-339886-th1da1bb 219 20 in in IN cord-339886-th1da1bb 219 21 REF REF NNP cord-339886-th1da1bb 219 22 . . . cord-339886-th1da1bb 219 23 105 105 CD cord-339886-th1da1bb 219 24 ) ) -RRB- cord-339886-th1da1bb 219 25 . . . cord-339886-th1da1bb 220 1 Chief chief JJ cord-339886-th1da1bb 220 2 among among IN cord-339886-th1da1bb 220 3 the the DT cord-339886-th1da1bb 220 4 issues issue NNS cord-339886-th1da1bb 220 5 that that WDT cord-339886-th1da1bb 220 6 Geller Geller NNP cord-339886-th1da1bb 220 7 et et NNP cord-339886-th1da1bb 220 8 al al NNP cord-339886-th1da1bb 220 9 . . . cord-339886-th1da1bb 221 1 identify identify VB cord-339886-th1da1bb 221 2 is be VBZ cord-339886-th1da1bb 221 3 the the DT cord-339886-th1da1bb 221 4 tension tension NN cord-339886-th1da1bb 221 5 that that WDT cord-339886-th1da1bb 221 6 exists exist VBZ cord-339886-th1da1bb 221 7 when when WRB cord-339886-th1da1bb 221 8 a a DT cord-339886-th1da1bb 221 9 new new JJ cord-339886-th1da1bb 221 10 technology technology NN cord-339886-th1da1bb 221 11 has have VBZ cord-339886-th1da1bb 221 12 the the DT cord-339886-th1da1bb 221 13 power power NN cord-339886-th1da1bb 221 14 to to TO cord-339886-th1da1bb 221 15 identify identify VB cord-339886-th1da1bb 221 16 a a DT cord-339886-th1da1bb 221 17 problem problem NN cord-339886-th1da1bb 221 18 but but CC cord-339886-th1da1bb 221 19 there there EX cord-339886-th1da1bb 221 20 is be VBZ cord-339886-th1da1bb 221 21 limited limited JJ cord-339886-th1da1bb 221 22 or or CC cord-339886-th1da1bb 221 23 no no DT cord-339886-th1da1bb 221 24 capacity capacity NN cord-339886-th1da1bb 221 25 to to TO cord-339886-th1da1bb 221 26 address address VB cord-339886-th1da1bb 221 27 the the DT cord-339886-th1da1bb 221 28 issue issue NN cord-339886-th1da1bb 221 29 . . . cord-339886-th1da1bb 222 1 Balancing balance VBG cord-339886-th1da1bb 222 2 the the DT cord-339886-th1da1bb 222 3 benefits benefit NNS cord-339886-th1da1bb 222 4 and and CC cord-339886-th1da1bb 222 5 harms harm NNS cord-339886-th1da1bb 222 6 to to IN cord-339886-th1da1bb 222 7 both both DT cord-339886-th1da1bb 222 8 individuals individual NNS cord-339886-th1da1bb 222 9 and and CC cord-339886-th1da1bb 222 10 populations population NNS cord-339886-th1da1bb 222 11 is be VBZ cord-339886-th1da1bb 222 12 challenging challenge VBG cord-339886-th1da1bb 222 13 when when WRB cord-339886-th1da1bb 222 14 the the DT cord-339886-th1da1bb 222 15 predictive predictive JJ cord-339886-th1da1bb 222 16 insight insight NN cord-339886-th1da1bb 222 17 offered offer VBN cord-339886-th1da1bb 222 18 by by IN cord-339886-th1da1bb 222 19 a a DT cord-339886-th1da1bb 222 20 genomic genomic JJ cord-339886-th1da1bb 222 21 technology technology NN cord-339886-th1da1bb 222 22 is be VBZ cord-339886-th1da1bb 222 23 variable variable JJ cord-339886-th1da1bb 223 1 -for -for : cord-339886-th1da1bb 223 2 example example NN cord-339886-th1da1bb 223 3 , , , cord-339886-th1da1bb 223 4 using use VBG cord-339886-th1da1bb 223 5 genomics genomic NNS cord-339886-th1da1bb 223 6 to to TO cord-339886-th1da1bb 223 7 identify identify VB cord-339886-th1da1bb 223 8 an an DT cord-339886-th1da1bb 223 9 individual individual NN cord-339886-th1da1bb 223 10 as as IN cord-339886-th1da1bb 223 11 a a DT cord-339886-th1da1bb 223 12 ' ' `` cord-339886-th1da1bb 223 13 super super JJ cord-339886-th1da1bb 223 14 spreader spreader NN cord-339886-th1da1bb 223 15 ' ' '' cord-339886-th1da1bb 223 16 has have VBZ cord-339886-th1da1bb 223 17 important important JJ cord-339886-th1da1bb 223 18 implications implication NNS cord-339886-th1da1bb 223 19 for for IN cord-339886-th1da1bb 223 20 quarantine quarantine NN cord-339886-th1da1bb 223 21 and and CC cord-339886-th1da1bb 223 22 isolation isolation NN cord-339886-th1da1bb 223 23 , , , cord-339886-th1da1bb 223 24 but but CC cord-339886-th1da1bb 223 25 that that DT cord-339886-th1da1bb 223 26 label label NN cord-339886-th1da1bb 223 27 may may MD cord-339886-th1da1bb 223 28 be be VB cord-339886-th1da1bb 223 29 predicated predicate VBN cord-339886-th1da1bb 223 30 on on IN cord-339886-th1da1bb 223 31 a a DT cord-339886-th1da1bb 223 32 tenuous tenuous JJ cord-339886-th1da1bb 223 33 prediction prediction NN cord-339886-th1da1bb 223 34 . . . cord-339886-th1da1bb 224 1 The the DT cord-339886-th1da1bb 224 2 problem problem NN cord-339886-th1da1bb 224 3 is be VBZ cord-339886-th1da1bb 224 4 further far RBR cord-339886-th1da1bb 224 5 compounded compound VBN cord-339886-th1da1bb 224 6 by by IN cord-339886-th1da1bb 224 7 the the DT cord-339886-th1da1bb 224 8 fact fact NN cord-339886-th1da1bb 224 9 that that IN cord-339886-th1da1bb 224 10 many many JJ cord-339886-th1da1bb 224 11 infectious infectious JJ cord-339886-th1da1bb 224 12 disease disease NN cord-339886-th1da1bb 224 13 diagnoses diagnosis NNS cord-339886-th1da1bb 224 14 carry carry VBP cord-339886-th1da1bb 224 15 with with IN cord-339886-th1da1bb 224 16 them -PRON- PRP cord-339886-th1da1bb 224 17 a a DT cord-339886-th1da1bb 224 18 certain certain JJ cord-339886-th1da1bb 224 19 amount amount NN cord-339886-th1da1bb 224 20 of of IN cord-339886-th1da1bb 224 21 stigma stigma NN cord-339886-th1da1bb 224 22 and and CC cord-339886-th1da1bb 224 23 that that IN cord-339886-th1da1bb 224 24 an an DT cord-339886-th1da1bb 224 25 individual individual NN cord-339886-th1da1bb 224 26 's 's POS cord-339886-th1da1bb 224 27 right right NN cord-339886-th1da1bb 224 28 to to IN cord-339886-th1da1bb 224 29 privacy privacy NN cord-339886-th1da1bb 224 30 might may MD cord-339886-th1da1bb 224 31 be be VB cord-339886-th1da1bb 224 32 superseded supersede VBN cord-339886-th1da1bb 224 33 by by IN cord-339886-th1da1bb 224 34 the the DT cord-339886-th1da1bb 224 35 need need NN cord-339886-th1da1bb 224 36 to to TO cord-339886-th1da1bb 224 37 protect protect VB cord-339886-th1da1bb 224 38 the the DT cord-339886-th1da1bb 224 39 larger large JJR cord-339886-th1da1bb 224 40 population population NN cord-339886-th1da1bb 224 41 105 105 CD cord-339886-th1da1bb 224 42 . . . cord-339886-th1da1bb 225 1 Data datum NNS cord-339886-th1da1bb 225 2 sharing sharing NN cord-339886-th1da1bb 225 3 and and CC cord-339886-th1da1bb 225 4 integration integration NN cord-339886-th1da1bb 225 5 . . . cord-339886-th1da1bb 226 1 A a DT cord-339886-th1da1bb 226 2 critical critical JJ cord-339886-th1da1bb 226 3 need need NN cord-339886-th1da1bb 226 4 for for IN cord-339886-th1da1bb 226 5 successful successful JJ cord-339886-th1da1bb 226 6 digital digital JJ cord-339886-th1da1bb 226 7 pathogen pathogen NN cord-339886-th1da1bb 226 8 surveillance surveillance NN cord-339886-th1da1bb 226 9 is be VBZ cord-339886-th1da1bb 226 10 the the DT cord-339886-th1da1bb 226 11 capacity capacity NN cord-339886-th1da1bb 226 12 for for IN cord-339886-th1da1bb 226 13 rapid rapid JJ cord-339886-th1da1bb 226 14 , , , cord-339886-th1da1bb 226 15 barrier barrier NN cord-339886-th1da1bb 226 16 - - HYPH cord-339886-th1da1bb 226 17 free free JJ cord-339886-th1da1bb 226 18 data datum NNS cord-339886-th1da1bb 226 19 sharing sharing NN cord-339886-th1da1bb 226 20 , , , cord-339886-th1da1bb 226 21 and and CC cord-339886-th1da1bb 226 22 arguments argument NNS cord-339886-th1da1bb 226 23 for for IN cord-339886-th1da1bb 226 24 such such JJ cord-339886-th1da1bb 226 25 sharing sharing NN cord-339886-th1da1bb 226 26 are be VBP cord-339886-th1da1bb 226 27 frequently frequently RB cord-339886-th1da1bb 226 28 rehashed rehash VBN cord-339886-th1da1bb 226 29 after after IN cord-339886-th1da1bb 226 30 outbreaks outbreak NNS cord-339886-th1da1bb 226 31 and and CC cord-339886-th1da1bb 226 32 epidemics epidemic NNS cord-339886-th1da1bb 226 33 . . . cord-339886-th1da1bb 227 1 Genomic genomic JJ cord-339886-th1da1bb 227 2 epidemiology epidemiology NN cord-339886-th1da1bb 227 3 was be VBD cord-339886-th1da1bb 227 4 born bear VBN cord-339886-th1da1bb 227 5 largely largely RB cord-339886-th1da1bb 227 6 in in IN cord-339886-th1da1bb 227 7 the the DT cord-339886-th1da1bb 227 8 academic academic JJ cord-339886-th1da1bb 227 9 sphere sphere NN cord-339886-th1da1bb 227 10 , , , cord-339886-th1da1bb 227 11 with with IN cord-339886-th1da1bb 227 12 early early JJ cord-339886-th1da1bb 227 13 papers paper NNS cord-339886-th1da1bb 227 14 coming come VBG cord-339886-th1da1bb 227 15 from from IN cord-339886-th1da1bb 227 16 laboratories laboratory NNS cord-339886-th1da1bb 227 17 with with IN cord-339886-th1da1bb 227 18 Nature Nature NNP cord-339886-th1da1bb 227 19 Reviews Reviews NNPS cord-339886-th1da1bb 227 20 | | NNP cord-339886-th1da1bb 227 21 Genetics Genetics NNP cord-339886-th1da1bb 228 1 In in IN cord-339886-th1da1bb 228 2 one one CD cord-339886-th1da1bb 228 3 such such JJ cord-339886-th1da1bb 228 4 region region NN cord-339886-th1da1bb 228 5 , , , cord-339886-th1da1bb 228 6 the the DT cord-339886-th1da1bb 228 7 syndromic syndromic NNP cord-339886-th1da1bb 228 8 surveillance surveillance NN cord-339886-th1da1bb 228 9 system system NN cord-339886-th1da1bb 228 10 reports report VBZ cord-339886-th1da1bb 228 11 higher high JJR cord-339886-th1da1bb 228 12 - - HYPH cord-339886-th1da1bb 228 13 than than IN cord-339886-th1da1bb 228 14 - - HYPH cord-339886-th1da1bb 228 15 average average JJ cord-339886-th1da1bb 228 16 sales sale NNS cord-339886-th1da1bb 228 17 of of IN cord-339886-th1da1bb 228 18 a a DT cord-339886-th1da1bb 228 19 common common JJ cord-339886-th1da1bb 228 20 medication medication NN cord-339886-th1da1bb 228 21 used use VBN cord-339886-th1da1bb 228 22 to to TO cord-339886-th1da1bb 228 23 relieve relieve VB cord-339886-th1da1bb 228 24 fever fever NN cord-339886-th1da1bb 228 25 . . . cord-339886-th1da1bb 229 1 Spatial spatial JJ cord-339886-th1da1bb 229 2 analysis analysis NN cord-339886-th1da1bb 229 3 of of IN cord-339886-th1da1bb 229 4 the the DT cord-339886-th1da1bb 229 5 data datum NNS cord-339886-th1da1bb 229 6 from from IN cord-339886-th1da1bb 229 7 the the DT cord-339886-th1da1bb 229 8 pharmacies pharmacy NNS cord-339886-th1da1bb 229 9 in in IN cord-339886-th1da1bb 229 10 the the DT cord-339886-th1da1bb 229 11 region region NN cord-339886-th1da1bb 229 12 suggests suggest VBZ cord-339886-th1da1bb 229 13 that that IN cord-339886-th1da1bb 229 14 the the DT cord-339886-th1da1bb 229 15 trend trend NN cord-339886-th1da1bb 229 16 is be VBZ cord-339886-th1da1bb 229 17 unique unique JJ cord-339886-th1da1bb 229 18 to to IN cord-339886-th1da1bb 229 19 a a DT cord-339886-th1da1bb 229 20 particular particular JJ cord-339886-th1da1bb 229 21 district district NN cord-339886-th1da1bb 229 22 ; ; : cord-339886-th1da1bb 229 23 a a DT cord-339886-th1da1bb 229 24 follow follow VB cord-339886-th1da1bb 229 25 - - HYPH cord-339886-th1da1bb 229 26 up up RP cord-339886-th1da1bb 229 27 geographic geographic JJ cord-339886-th1da1bb 229 28 information information NN cord-339886-th1da1bb 229 29 system system NN cord-339886-th1da1bb 229 30 ( ( -LRB- cord-339886-th1da1bb 229 31 GIS GIS NNP cord-339886-th1da1bb 229 32 ) ) -RRB- cord-339886-th1da1bb 229 33 analysis analysis NN cord-339886-th1da1bb 229 34 using use VBG cord-339886-th1da1bb 229 35 satellite satellite NN cord-339886-th1da1bb 229 36 data datum NNS cord-339886-th1da1bb 229 37 reveals reveal VBZ cord-339886-th1da1bb 229 38 that that IN cord-339886-th1da1bb 229 39 this this DT cord-339886-th1da1bb 229 40 area area NN cord-339886-th1da1bb 229 41 borders border VBZ cord-339886-th1da1bb 229 42 a a DT cord-339886-th1da1bb 229 43 forest forest NN cord-339886-th1da1bb 229 44 and and CC cord-339886-th1da1bb 229 45 is be VBZ cord-339886-th1da1bb 229 46 increasingly increasingly RB cord-339886-th1da1bb 229 47 being be VBG cord-339886-th1da1bb 229 48 used use VBN cord-339886-th1da1bb 229 49 for for IN cord-339886-th1da1bb 229 50 the the DT cord-339886-th1da1bb 229 51 commercial commercial JJ cord-339886-th1da1bb 229 52 production production NN cord-339886-th1da1bb 229 53 of of IN cord-339886-th1da1bb 229 54 bat bat NN cord-339886-th1da1bb 229 55 guano guano NN cord-339886-th1da1bb 229 56 . . . cord-339886-th1da1bb 230 1 An an DT cord-339886-th1da1bb 230 2 alert alert NN cord-339886-th1da1bb 230 3 is be VBZ cord-339886-th1da1bb 230 4 triggered trigger VBN cord-339886-th1da1bb 230 5 , , , cord-339886-th1da1bb 230 6 and and CC cord-339886-th1da1bb 230 7 the the DT cord-339886-th1da1bb 230 8 field field NN cord-339886-th1da1bb 230 9 response response NN cord-339886-th1da1bb 230 10 team team NN cord-339886-th1da1bb 230 11 meets meet VBZ cord-339886-th1da1bb 230 12 with with IN cord-339886-th1da1bb 230 13 citizens citizen NNS cord-339886-th1da1bb 230 14 in in IN cord-339886-th1da1bb 230 15 the the DT cord-339886-th1da1bb 230 16 area area NN cord-339886-th1da1bb 230 17 . . . cord-339886-th1da1bb 231 1 Nasopharyngeal nasopharyngeal JJ cord-339886-th1da1bb 231 2 swabs swab NNS cord-339886-th1da1bb 231 3 are be VBP cord-339886-th1da1bb 231 4 taken take VBN cord-339886-th1da1bb 231 5 from from IN cord-339886-th1da1bb 231 6 humans human NNS cord-339886-th1da1bb 231 7 and and CC cord-339886-th1da1bb 231 8 livestock livestock NN cord-339886-th1da1bb 231 9 with with IN cord-339886-th1da1bb 231 10 fever fever NN cord-339886-th1da1bb 231 11 as as RB cord-339886-th1da1bb 231 12 well well RB cord-339886-th1da1bb 231 13 as as IN cord-339886-th1da1bb 231 14 from from IN cord-339886-th1da1bb 231 15 guano guano NN cord-339886-th1da1bb 231 16 and and CC cord-339886-th1da1bb 231 17 bat bat NN cord-339886-th1da1bb 231 18 tissue tissue NN cord-339886-th1da1bb 231 19 collected collect VBN cord-339886-th1da1bb 231 20 in in IN cord-339886-th1da1bb 231 21 the the DT cord-339886-th1da1bb 231 22 area area NN cord-339886-th1da1bb 231 23 . . . cord-339886-th1da1bb 232 1 The the DT cord-339886-th1da1bb 232 2 samples sample NNS cord-339886-th1da1bb 232 3 are be VBP cord-339886-th1da1bb 232 4 immediately immediately RB cord-339886-th1da1bb 232 5 analysed analyse VBN cord-339886-th1da1bb 232 6 using use VBG cord-339886-th1da1bb 232 7 a a DT cord-339886-th1da1bb 232 8 portable portable JJ cord-339886-th1da1bb 232 9 DNA dna NN cord-339886-th1da1bb 232 10 sequencer sequencer NN cord-339886-th1da1bb 232 11 coupled couple VBN cord-339886-th1da1bb 232 12 to to IN cord-339886-th1da1bb 232 13 a a DT cord-339886-th1da1bb 232 14 smartphone smartphone NN cord-339886-th1da1bb 232 15 . . . cord-339886-th1da1bb 233 1 An an DT cord-339886-th1da1bb 233 2 app app NN cord-339886-th1da1bb 233 3 on on IN cord-339886-th1da1bb 233 4 the the DT cord-339886-th1da1bb 233 5 phone phone NN cord-339886-th1da1bb 233 6 reports report VBZ cord-339886-th1da1bb 233 7 the the DT cord-339886-th1da1bb 233 8 clinical clinical JJ cord-339886-th1da1bb 233 9 metagenomic metagenomic NN cord-339886-th1da1bb 233 10 results result NNS cord-339886-th1da1bb 233 11 in in IN cord-339886-th1da1bb 233 12 real real JJ cord-339886-th1da1bb 233 13 time time NN cord-339886-th1da1bb 233 14 , , , cord-339886-th1da1bb 233 15 revealing reveal VBG cord-339886-th1da1bb 233 16 that that IN cord-339886-th1da1bb 233 17 in in IN cord-339886-th1da1bb 233 18 many many JJ cord-339886-th1da1bb 233 19 of of IN cord-339886-th1da1bb 233 20 the the DT cord-339886-th1da1bb 233 21 ill ill JJ cord-339886-th1da1bb 233 22 humans human NNS cord-339886-th1da1bb 233 23 and and CC cord-339886-th1da1bb 233 24 animals animal NNS cord-339886-th1da1bb 233 25 , , , cord-339886-th1da1bb 233 26 a a DT cord-339886-th1da1bb 233 27 novel novel JJ cord-339886-th1da1bb 233 28 coronavirus coronavirus NN cord-339886-th1da1bb 233 29 makes make VBZ cord-339886-th1da1bb 233 30 up up RP cord-339886-th1da1bb 233 31 the the DT cord-339886-th1da1bb 233 32 bulk bulk NN cord-339886-th1da1bb 233 33 of of IN cord-339886-th1da1bb 233 34 the the DT cord-339886-th1da1bb 233 35 microbial microbial JJ cord-339886-th1da1bb 233 36 nucleic nucleic JJ cord-339886-th1da1bb 233 37 acid acid NN cord-339886-th1da1bb 233 38 fraction fraction NN cord-339886-th1da1bb 233 39 . . . cord-339886-th1da1bb 234 1 The the DT cord-339886-th1da1bb 234 2 sequencing sequencing NN cord-339886-th1da1bb 234 3 data datum NNS cord-339886-th1da1bb 234 4 are be VBP cord-339886-th1da1bb 234 5 immediately immediately RB cord-339886-th1da1bb 234 6 uploaded upload VBN cord-339886-th1da1bb 234 7 to to IN cord-339886-th1da1bb 234 8 a a DT cord-339886-th1da1bb 234 9 public public JJ cord-339886-th1da1bb 234 10 repository repository NN cord-339886-th1da1bb 234 11 as as IN cord-339886-th1da1bb 234 12 they -PRON- PRP cord-339886-th1da1bb 234 13 are be VBP cord-339886-th1da1bb 234 14 generated generate VBN cord-339886-th1da1bb 234 15 , , , cord-339886-th1da1bb 234 16 tagged tag VBN cord-339886-th1da1bb 234 17 with with IN cord-339886-th1da1bb 234 18 metadata metadata NN cord-339886-th1da1bb 234 19 about about IN cord-339886-th1da1bb 234 20 the the DT cord-339886-th1da1bb 234 21 host host NN cord-339886-th1da1bb 234 22 , , , cord-339886-th1da1bb 234 23 sample sample NN cord-339886-th1da1bb 234 24 type type NN cord-339886-th1da1bb 234 25 and and CC cord-339886-th1da1bb 234 26 location location NN cord-339886-th1da1bb 234 27 and and CC cord-339886-th1da1bb 234 28 stored store VBN cord-339886-th1da1bb 234 29 according accord VBG cord-339886-th1da1bb 234 30 to to IN cord-339886-th1da1bb 234 31 a a DT cord-339886-th1da1bb 234 32 pathogen pathogen NN cord-339886-th1da1bb 234 33 surveillance surveillance NN cord-339886-th1da1bb 234 34 ontology ontology NN cord-339886-th1da1bb 234 35 . . . cord-339886-th1da1bb 235 1 The the DT cord-339886-th1da1bb 235 2 data data NN cord-339886-th1da1bb 235 3 release release NN cord-339886-th1da1bb 235 4 triggers trigger VBZ cord-339886-th1da1bb 235 5 an an DT cord-339886-th1da1bb 235 6 announcement announcement NN cord-339886-th1da1bb 235 7 via via IN cord-339886-th1da1bb 235 8 social social JJ cord-339886-th1da1bb 235 9 media medium NNS cord-339886-th1da1bb 235 10 of of IN cord-339886-th1da1bb 235 11 a a DT cord-339886-th1da1bb 235 12 novel novel JJ cord-339886-th1da1bb 235 13 sequence sequence NN cord-339886-th1da1bb 235 14 , , , cord-339886-th1da1bb 235 15 and and CC cord-339886-th1da1bb 235 16 within within IN cord-339886-th1da1bb 235 17 minutes minute NNS cord-339886-th1da1bb 235 18 , , , cord-339886-th1da1bb 235 19 interested interested JJ cord-339886-th1da1bb 235 20 virologists virologist NNS cord-339886-th1da1bb 235 21 have have VBP cord-339886-th1da1bb 235 22 created create VBN cord-339886-th1da1bb 235 23 a a DT cord-339886-th1da1bb 235 24 shared share VBN cord-339886-th1da1bb 235 25 online online JJ cord-339886-th1da1bb 235 26 workspace workspace NN cord-339886-th1da1bb 235 27 and and CC cord-339886-th1da1bb 235 28 open open JJ cord-339886-th1da1bb 235 29 lab lab NN cord-339886-th1da1bb 235 30 notebook notebook NN cord-339886-th1da1bb 235 31 to to TO cord-339886-th1da1bb 235 32 collect collect VB cord-339886-th1da1bb 235 33 their -PRON- PRP$ cord-339886-th1da1bb 235 34 analyses analysis NNS cord-339886-th1da1bb 235 35 of of IN cord-339886-th1da1bb 235 36 the the DT cord-339886-th1da1bb 235 37 new new JJ cord-339886-th1da1bb 235 38 pathogen pathogen NN cord-339886-th1da1bb 235 39 . . . cord-339886-th1da1bb 236 1 extensive extensive JJ cord-339886-th1da1bb 236 2 histories history NNS cord-339886-th1da1bb 236 3 in in IN cord-339886-th1da1bb 236 4 microbial microbial JJ cord-339886-th1da1bb 236 5 genomics genomic NNS cord-339886-th1da1bb 236 6 and and CC cord-339886-th1da1bb 236 7 bioinformatics bioinformatic NNS cord-339886-th1da1bb 236 8 . . . cord-339886-th1da1bb 237 1 For for IN cord-339886-th1da1bb 237 2 this this DT cord-339886-th1da1bb 237 3 community community NN cord-339886-th1da1bb 237 4 , , , cord-339886-th1da1bb 237 5 open open JJ cord-339886-th1da1bb 237 6 access access NN cord-339886-th1da1bb 237 7 to to IN cord-339886-th1da1bb 237 8 genome genome NN cord-339886-th1da1bb 237 9 sequences sequence NNS cord-339886-th1da1bb 237 10 , , , cord-339886-th1da1bb 237 11 software software NN cord-339886-th1da1bb 237 12 and and CC cord-339886-th1da1bb 237 13 , , , cord-339886-th1da1bb 237 14 more more RBR cord-339886-th1da1bb 237 15 recently recently RB cord-339886-th1da1bb 237 16 , , , cord-339886-th1da1bb 237 17 publications publication NNS cord-339886-th1da1bb 237 18 has have VBZ cord-339886-th1da1bb 237 19 tended tend VBN cord-339886-th1da1bb 237 20 to to TO cord-339886-th1da1bb 237 21 be be VB cord-339886-th1da1bb 237 22 the the DT cord-339886-th1da1bb 237 23 rule rule NN cord-339886-th1da1bb 237 24 rather rather RB cord-339886-th1da1bb 237 25 than than IN cord-339886-th1da1bb 237 26 the the DT cord-339886-th1da1bb 237 27 exception exception NN cord-339886-th1da1bb 237 28 . . . cord-339886-th1da1bb 238 1 Indeed indeed RB cord-339886-th1da1bb 238 2 , , , cord-339886-th1da1bb 238 3 a a DT cord-339886-th1da1bb 238 4 2004 2004 CD cord-339886-th1da1bb 238 5 National National NNP cord-339886-th1da1bb 238 6 Research Research NNP cord-339886-th1da1bb 238 7 Council Council NNP cord-339886-th1da1bb 238 8 report report NN cord-339886-th1da1bb 238 9 described describe VBD cord-339886-th1da1bb 238 10 " " `` cord-339886-th1da1bb 238 11 the the DT cord-339886-th1da1bb 238 12 culture culture NN cord-339886-th1da1bb 238 13 of of IN cord-339886-th1da1bb 238 14 genomics genomic NNS cord-339886-th1da1bb 238 15 " " '' cord-339886-th1da1bb 238 16 as as IN cord-339886-th1da1bb 238 17 " " `` cord-339886-th1da1bb 238 18 unique unique JJ cord-339886-th1da1bb 238 19 in in IN cord-339886-th1da1bb 238 20 its -PRON- PRP$ cord-339886-th1da1bb 238 21 evolution evolution NN cord-339886-th1da1bb 238 22 into into IN cord-339886-th1da1bb 238 23 a a DT cord-339886-th1da1bb 238 24 global global JJ cord-339886-th1da1bb 238 25 web web NN cord-339886-th1da1bb 238 26 of of IN cord-339886-th1da1bb 238 27 tools tool NNS cord-339886-th1da1bb 238 28 and and CC cord-339886-th1da1bb 238 29 information information NN cord-339886-th1da1bb 238 30 " " '' cord-339886-th1da1bb 238 31 ( ( -LRB- cord-339886-th1da1bb 238 32 REF ref NN cord-339886-th1da1bb 238 33 . . . cord-339886-th1da1bb 238 34 106 106 CD cord-339886-th1da1bb 238 35 ) ) -RRB- cord-339886-th1da1bb 238 36 . . . cord-339886-th1da1bb 239 1 The the DT cord-339886-th1da1bb 239 2 same same JJ cord-339886-th1da1bb 239 3 report report NN cord-339886-th1da1bb 239 4 includes include VBZ cord-339886-th1da1bb 239 5 a a DT cord-339886-th1da1bb 239 6 series series NN cord-339886-th1da1bb 239 7 of of IN cord-339886-th1da1bb 239 8 recommendations recommendation NNS cord-339886-th1da1bb 239 9 on on IN cord-339886-th1da1bb 239 10 access access NN cord-339886-th1da1bb 239 11 to to IN cord-339886-th1da1bb 239 12 pathogen pathogen NN cord-339886-th1da1bb 239 13 genome genome NN cord-339886-th1da1bb 239 14 data datum NNS cord-339886-th1da1bb 239 15 , , , cord-339886-th1da1bb 239 16 including include VBG cord-339886-th1da1bb 239 17 the the DT cord-339886-th1da1bb 239 18 statement statement NN cord-339886-th1da1bb 239 19 that that IN cord-339886-th1da1bb 239 20 " " `` cord-339886-th1da1bb 239 21 rapid rapid JJ cord-339886-th1da1bb 239 22 , , , cord-339886-th1da1bb 239 23 unrestricted unrestricted JJ cord-339886-th1da1bb 239 24 public public JJ cord-339886-th1da1bb 239 25 access access NN cord-339886-th1da1bb 239 26 to to IN cord-339886-th1da1bb 239 27 primary primary JJ cord-339886-th1da1bb 239 28 genome genome NN cord-339886-th1da1bb 239 29 sequence sequence NN cord-339886-th1da1bb 239 30 data datum NNS cord-339886-th1da1bb 239 31 , , , cord-339886-th1da1bb 239 32 annotations annotation NNS cord-339886-th1da1bb 239 33 of of IN cord-339886-th1da1bb 239 34 genome genome NN cord-339886-th1da1bb 239 35 data datum NNS cord-339886-th1da1bb 239 36 , , , cord-339886-th1da1bb 239 37 genome genome NN cord-339886-th1da1bb 239 38 databases database NNS cord-339886-th1da1bb 239 39 , , , cord-339886-th1da1bb 239 40 and and CC cord-339886-th1da1bb 239 41 Internet internet NN cord-339886-th1da1bb 239 42 - - HYPH cord-339886-th1da1bb 239 43 based base VBN cord-339886-th1da1bb 239 44 tools tool NNS cord-339886-th1da1bb 239 45 for for IN cord-339886-th1da1bb 239 46 genome genome NN cord-339886-th1da1bb 239 47 analysis analysis NN cord-339886-th1da1bb 239 48 should should MD cord-339886-th1da1bb 239 49 be be VB cord-339886-th1da1bb 239 50 encouraged encourage VBN cord-339886-th1da1bb 239 51 " " '' cord-339886-th1da1bb 239 52 ( ( -LRB- cord-339886-th1da1bb 239 53 REF ref NN cord-339886-th1da1bb 239 54 . . . cord-339886-th1da1bb 239 55 106 106 CD cord-339886-th1da1bb 239 56 ) ) -RRB- cord-339886-th1da1bb 239 57 . . . cord-339886-th1da1bb 240 1 As as IN cord-339886-th1da1bb 240 2 genomics genomic NNS cord-339886-th1da1bb 240 3 has have VBZ cord-339886-th1da1bb 240 4 moved move VBN cord-339886-th1da1bb 240 5 into into IN cord-339886-th1da1bb 240 6 the the DT cord-339886-th1da1bb 240 7 domain domain NN cord-339886-th1da1bb 240 8 of of IN cord-339886-th1da1bb 240 9 clinical clinical JJ cord-339886-th1da1bb 240 10 and and CC cord-339886-th1da1bb 240 11 public public JJ cord-339886-th1da1bb 240 12 health health NN cord-339886-th1da1bb 240 13 practice practice NN cord-339886-th1da1bb 240 14 , , , cord-339886-th1da1bb 240 15 the the DT cord-339886-th1da1bb 240 16 notion notion NN cord-339886-th1da1bb 240 17 of of IN cord-339886-th1da1bb 240 18 free free JJ cord-339886-th1da1bb 240 19 and and CC cord-339886-th1da1bb 240 20 i -PRON- PRP cord-339886-th1da1bb 240 21 m be VBP cord-339886-th1da1bb 240 22 mediate mediate VB cord-339886-th1da1bb 240 23 access access NN cord-339886-th1da1bb 240 24 to to IN cord-339886-th1da1bb 240 25 genomic genomic JJ cord-339886-th1da1bb 240 26 surveillance surveillance NN cord-339886-th1da1bb 240 27 data datum NNS cord-339886-th1da1bb 240 28 has have VBZ cord-339886-th1da1bb 240 29 encountered encounter VBN cord-339886-th1da1bb 240 30 several several JJ cord-339886-th1da1bb 240 31 barriers barrier NNS cord-339886-th1da1bb 240 32 : : : cord-339886-th1da1bb 240 33 the the DT cord-339886-th1da1bb 240 34 siloing siloing NN cord-339886-th1da1bb 240 35 of of IN cord-339886-th1da1bb 240 36 critical critical JJ cord-339886-th1da1bb 240 37 metadata metadata NN cord-339886-th1da1bb 240 38 across across IN cord-339886-th1da1bb 240 39 multiple multiple JJ cord-339886-th1da1bb 240 40 public public JJ cord-339886-th1da1bb 240 41 health health NN cord-339886-th1da1bb 240 42 databases database NNS cord-339886-th1da1bb 240 43 with with IN cord-339886-th1da1bb 240 44 no no DT cord-339886-th1da1bb 240 45 interoperability interoperability NN cord-339886-th1da1bb 240 46 ; ; : cord-339886-th1da1bb 240 47 balancing balance VBG cord-339886-th1da1bb 240 48 openness openness NN cord-339886-th1da1bb 240 49 and and CC cord-339886-th1da1bb 240 50 transparency transparency NN cord-339886-th1da1bb 240 51 with with IN cord-339886-th1da1bb 240 52 patient patient JJ cord-339886-th1da1bb 240 53 privacy privacy NN cord-339886-th1da1bb 240 54 and and CC cord-339886-th1da1bb 240 55 safety safety NN cord-339886-th1da1bb 240 56 ; ; : cord-339886-th1da1bb 240 57 variable variable JJ cord-339886-th1da1bb 240 58 data data NN cord-339886-th1da1bb 240 59 quality quality NN cord-339886-th1da1bb 240 60 , , , cord-339886-th1da1bb 240 61 particularly particularly RB cord-339886-th1da1bb 240 62 in in IN cord-339886-th1da1bb 240 63 resource resource NN cord-339886-th1da1bb 240 64 - - HYPH cord-339886-th1da1bb 240 65 limited limit VBN cord-339886-th1da1bb 240 66 settings setting NNS cord-339886-th1da1bb 240 67 ; ; : cord-339886-th1da1bb 240 68 concerns concern NNS cord-339886-th1da1bb 240 69 over over IN cord-339886-th1da1bb 240 70 data datum NNS cord-339886-th1da1bb 240 71 reuse reuse NN cord-339886-th1da1bb 240 72 by by IN cord-339886-th1da1bb 240 73 third third JJ cord-339886-th1da1bb 240 74 parties party NNS cord-339886-th1da1bb 240 75 ; ; : cord-339886-th1da1bb 240 76 a a DT cord-339886-th1da1bb 240 77 lack lack NN cord-339886-th1da1bb 240 78 of of IN cord-339886-th1da1bb 240 79 standards standard NNS cord-339886-th1da1bb 240 80 and and CC cord-339886-th1da1bb 240 81 ontologies ontology NNS cord-339886-th1da1bb 240 82 to to TO cord-339886-th1da1bb 240 83 capture capture VB cord-339886-th1da1bb 240 84 metadata metadata NN cord-339886-th1da1bb 240 85 ; ; : cord-339886-th1da1bb 240 86 and and CC cord-339886-th1da1bb 240 87 career career NN cord-339886-th1da1bb 240 88 advancement advancement NN cord-339886-th1da1bb 240 89 disincentives disincentive NNS cord-339886-th1da1bb 240 90 to to IN cord-339886-th1da1bb 240 91 releasing release VBG cord-339886-th1da1bb 240 92 data datum NNS cord-339886-th1da1bb 240 93 [ [ -LRB- cord-339886-th1da1bb 240 94 107 107 CD cord-339886-th1da1bb 240 95 ] ] -RRB- cord-339886-th1da1bb 240 96 [ [ -LRB- cord-339886-th1da1bb 240 97 108 108 CD cord-339886-th1da1bb 240 98 ] ] -RRB- cord-339886-th1da1bb 240 99 [ [ -LRB- cord-339886-th1da1bb 240 100 109 109 CD cord-339886-th1da1bb 240 101 ] ] -RRB- cord-339886-th1da1bb 240 102 . . . cord-339886-th1da1bb 241 1 Despite despite IN cord-339886-th1da1bb 241 2 these these DT cord-339886-th1da1bb 241 3 challenges challenge NNS cord-339886-th1da1bb 241 4 , , , cord-339886-th1da1bb 241 5 the the DT cord-339886-th1da1bb 241 6 spirit spirit NNP cord-339886-th1da1bb 241 7 of of IN cord-339886-th1da1bb 241 8 open open JJ cord-339886-th1da1bb 241 9 access access NN cord-339886-th1da1bb 241 10 and and CC cord-339886-th1da1bb 241 11 open open JJ cord-339886-th1da1bb 241 12 data datum NNS cord-339886-th1da1bb 241 13 remains remain VBZ cord-339886-th1da1bb 241 14 strong strong JJ cord-339886-th1da1bb 241 15 in in IN cord-339886-th1da1bb 241 16 the the DT cord-339886-th1da1bb 241 17 community community NN cord-339886-th1da1bb 241 18 , , , cord-339886-th1da1bb 241 19 with with IN cord-339886-th1da1bb 241 20 over over IN cord-339886-th1da1bb 241 21 40 40 CD cord-339886-th1da1bb 241 22 public public JJ cord-339886-th1da1bb 241 23 health health NN cord-339886-th1da1bb 241 24 leaders leader NNS cord-339886-th1da1bb 241 25 from from IN cord-339886-th1da1bb 241 26 around around IN cord-339886-th1da1bb 241 27 the the DT cord-339886-th1da1bb 241 28 world world NN cord-339886-th1da1bb 241 29 recently recently RB cord-339886-th1da1bb 241 30 signing sign VBG cord-339886-th1da1bb 241 31 a a DT cord-339886-th1da1bb 241 32 joint joint JJ cord-339886-th1da1bb 241 33 statement statement NN cord-339886-th1da1bb 241 34 on on IN cord-339886-th1da1bb 241 35 data datum NNS cord-339886-th1da1bb 241 36 sharing sharing NN cord-339886-th1da1bb 241 37 for for IN cord-339886-th1da1bb 241 38 public public JJ cord-339886-th1da1bb 241 39 health health NN cord-339886-th1da1bb 241 40 surveillance surveillance NN cord-339886-th1da1bb 241 41 110 110 CD cord-339886-th1da1bb 241 42 . . . cord-339886-th1da1bb 242 1 The the DT cord-339886-th1da1bb 242 2 Ebola Ebola NNP cord-339886-th1da1bb 242 3 and and CC cord-339886-th1da1bb 242 4 Zika Zika NNP cord-339886-th1da1bb 242 5 responses response NNS cord-339886-th1da1bb 242 6 in in IN cord-339886-th1da1bb 242 7 particular particular JJ cord-339886-th1da1bb 242 8 highlight highlight VB cord-339886-th1da1bb 242 9 the the DT cord-339886-th1da1bb 242 10 role role NN cord-339886-th1da1bb 242 11 of of IN cord-339886-th1da1bb 242 12 realtime realtime JJ cord-339886-th1da1bb 242 13 sharing sharing NN cord-339886-th1da1bb 242 14 of of IN cord-339886-th1da1bb 242 15 data datum NNS cord-339886-th1da1bb 242 16 and and CC cord-339886-th1da1bb 242 17 samples sample NNS cord-339886-th1da1bb 242 18 , , , cord-339886-th1da1bb 242 19 be be VB cord-339886-th1da1bb 242 20 it -PRON- PRP cord-339886-th1da1bb 242 21 through through IN cord-339886-th1da1bb 242 22 the the DT cord-339886-th1da1bb 242 23 use use NN cord-339886-th1da1bb 242 24 of of IN cord-339886-th1da1bb 242 25 chat chat NN cord-339886-th1da1bb 242 26 groups group NNS cord-339886-th1da1bb 242 27 and and CC cord-339886-th1da1bb 242 28 a a DT cord-339886-th1da1bb 242 29 LabKey LabKey NNP cord-339886-th1da1bb 242 30 server server NN cord-339886-th1da1bb 242 31 to to TO cord-339886-th1da1bb 242 32 disseminate disseminate VB cord-339886-th1da1bb 242 33 Zika Zika NNP cord-339886-th1da1bb 242 34 data datum NNS cord-339886-th1da1bb 242 35 111 111 CD cord-339886-th1da1bb 242 36 or or CC cord-339886-th1da1bb 242 37 GitHub GitHub NNP cord-339886-th1da1bb 242 38 to to TO cord-339886-th1da1bb 242 39 share share VB cord-339886-th1da1bb 242 40 Ebola Ebola NNP cord-339886-th1da1bb 242 41 data datum NNS cord-339886-th1da1bb 242 42 112 112 CD cord-339886-th1da1bb 242 43 . . . cord-339886-th1da1bb 243 1 In in IN cord-339886-th1da1bb 243 2 the the DT cord-339886-th1da1bb 243 3 wake wake NN cord-339886-th1da1bb 243 4 of of IN cord-339886-th1da1bb 243 5 Ebola Ebola NNP cord-339886-th1da1bb 243 6 , , , cord-339886-th1da1bb 243 7 Yozwiak Yozwiak NNP cord-339886-th1da1bb 243 8 et et FW cord-339886-th1da1bb 243 9 al al NNP cord-339886-th1da1bb 243 10 . . . cord-339886-th1da1bb 244 1 113 113 CD cord-339886-th1da1bb 244 2 and and CC cord-339886-th1da1bb 244 3 Chretien Chretien NNP cord-339886-th1da1bb 244 4 et et NNP cord-339886-th1da1bb 244 5 al al NNP cord-339886-th1da1bb 244 6 . . . cord-339886-th1da1bb 245 1 114 114 CD cord-339886-th1da1bb 245 2 outline outline VBP cord-339886-th1da1bb 245 3 additional additional JJ cord-339886-th1da1bb 245 4 issues issue NNS cord-339886-th1da1bb 245 5 facing face VBG cord-339886-th1da1bb 245 6 data datum NNS cord-339886-th1da1bb 245 7 sharing sharing NN cord-339886-th1da1bb 245 8 , , , cord-339886-th1da1bb 245 9 from from IN cord-339886-th1da1bb 245 10 differing differ VBG cord-339886-th1da1bb 245 11 cultures culture NNS cord-339886-th1da1bb 245 12 and and CC cord-339886-th1da1bb 245 13 academic academic JJ cord-339886-th1da1bb 245 14 norms norm NNS cord-339886-th1da1bb 245 15 to to IN cord-339886-th1da1bb 245 16 complicated complicated JJ cord-339886-th1da1bb 245 17 consent consent NN cord-339886-th1da1bb 245 18 procedures procedure NNS cord-339886-th1da1bb 245 19 and and CC cord-339886-th1da1bb 245 20 technical technical JJ cord-339886-th1da1bb 245 21 limitations limitation NNS cord-339886-th1da1bb 245 22 . . . cord-339886-th1da1bb 246 1 They -PRON- PRP cord-339886-th1da1bb 246 2 note note VBP cord-339886-th1da1bb 246 3 that that IN cord-339886-th1da1bb 246 4 we -PRON- PRP cord-339886-th1da1bb 246 5 as as IN cord-339886-th1da1bb 246 6 a a DT cord-339886-th1da1bb 246 7 community community NN cord-339886-th1da1bb 246 8 must must MD cord-339886-th1da1bb 246 9 agree agree VB cord-339886-th1da1bb 246 10 on on IN cord-339886-th1da1bb 246 11 standards standard NNS cord-339886-th1da1bb 246 12 and and CC cord-339886-th1da1bb 246 13 practices practice NNS cord-339886-th1da1bb 246 14 promoting promote VBG cord-339886-th1da1bb 246 15 cooperation cooperation NN cord-339886-th1da1bb 246 16 -a -a HYPH cord-339886-th1da1bb 246 17 conversation conversation NN cord-339886-th1da1bb 246 18 that that WDT cord-339886-th1da1bb 246 19 could could MD cord-339886-th1da1bb 246 20 begin begin VB cord-339886-th1da1bb 246 21 by by IN cord-339886-th1da1bb 246 22 examining examine VBG cord-339886-th1da1bb 246 23 how how WRB cord-339886-th1da1bb 246 24 the the DT cord-339886-th1da1bb 246 25 Global Global NNP cord-339886-th1da1bb 246 26 Alliance Alliance NNP cord-339886-th1da1bb 246 27 for for IN cord-339886-th1da1bb 246 28 Genomics Genomics NNP cord-339886-th1da1bb 246 29 and and CC cord-339886-th1da1bb 246 30 Health Health NNP cord-339886-th1da1bb 246 31 ( ( -LRB- cord-339886-th1da1bb 246 32 GA4GH GA4GH NNP cord-339886-th1da1bb 246 33 ) ) -RRB- cord-339886-th1da1bb 246 34 framework framework NN cord-339886-th1da1bb 246 35 for for IN cord-339886-th1da1bb 246 36 responsible responsible JJ cord-339886-th1da1bb 246 37 sharing sharing NN cord-339886-th1da1bb 246 38 of of IN cord-339886-th1da1bb 246 39 genomic genomic JJ cord-339886-th1da1bb 246 40 and and CC cord-339886-th1da1bb 246 41 health health NN cord-339886-th1da1bb 246 42 - - HYPH cord-339886-th1da1bb 246 43 related relate VBN cord-339886-th1da1bb 246 44 data datum NNS cord-339886-th1da1bb 246 45 ( ( -LRB- cord-339886-th1da1bb 246 46 BOX BOX NNP cord-339886-th1da1bb 246 47 1 1 CD cord-339886-th1da1bb 246 48 ) ) -RRB- cord-339886-th1da1bb 246 49 could could MD cord-339886-th1da1bb 246 50 be be VB cord-339886-th1da1bb 246 51 adapted adapt VBN cord-339886-th1da1bb 246 52 for for IN cord-339886-th1da1bb 246 53 the the DT cord-339886-th1da1bb 246 54 digital digital JJ cord-339886-th1da1bb 246 55 pathogen pathogen NN cord-339886-th1da1bb 246 56 surveillance surveillance NN cord-339886-th1da1bb 246 57 community community NN cord-339886-th1da1bb 246 58 . . . cord-339886-th1da1bb 247 1 The the DT cord-339886-th1da1bb 247 2 future future NN cord-339886-th1da1bb 247 3 : : : cord-339886-th1da1bb 247 4 the the DT cord-339886-th1da1bb 247 5 sequencing sequencing NN cord-339886-th1da1bb 247 6 singularity singularity NN cord-339886-th1da1bb 247 7 ? ? . cord-339886-th1da1bb 248 1 Transformative transformative JJ cord-339886-th1da1bb 248 2 change change NN cord-339886-th1da1bb 248 3 to to IN cord-339886-th1da1bb 248 4 public public JJ cord-339886-th1da1bb 248 5 and and CC cord-339886-th1da1bb 248 6 global global JJ cord-339886-th1da1bb 248 7 health health NN cord-339886-th1da1bb 248 8 is be VBZ cord-339886-th1da1bb 248 9 profoundly profoundly RB cord-339886-th1da1bb 248 10 difficult difficult JJ cord-339886-th1da1bb 248 11 . . . cord-339886-th1da1bb 249 1 Complicating complicate VBG cord-339886-th1da1bb 249 2 the the DT cord-339886-th1da1bb 249 3 existence existence NN cord-339886-th1da1bb 249 4 of of IN cord-339886-th1da1bb 249 5 a a DT cord-339886-th1da1bb 249 6 rapid rapid JJ cord-339886-th1da1bb 249 7 , , , cord-339886-th1da1bb 249 8 open open JJ cord-339886-th1da1bb 249 9 , , , cord-339886-th1da1bb 249 10 transparent transparent JJ cord-339886-th1da1bb 249 11 response response NN cord-339886-th1da1bb 249 12 is be VBZ cord-339886-th1da1bb 249 13 the the DT cord-339886-th1da1bb 249 14 fact fact NN cord-339886-th1da1bb 249 15 that that IN cord-339886-th1da1bb 249 16 no no RB cord-339886-th1da1bb 249 17 matter matter RB cord-339886-th1da1bb 249 18 the the DT cord-339886-th1da1bb 249 19 setting setting NN cord-339886-th1da1bb 249 20 , , , cord-339886-th1da1bb 249 21 there there EX cord-339886-th1da1bb 249 22 are be VBP cord-339886-th1da1bb 249 23 often often RB cord-339886-th1da1bb 249 24 conflicting conflict VBG cord-339886-th1da1bb 249 25 interests interest NNS cord-339886-th1da1bb 249 26 at at IN cord-339886-th1da1bb 249 27 work work NN cord-339886-th1da1bb 249 28 . . . cord-339886-th1da1bb 250 1 In in IN cord-339886-th1da1bb 250 2 an an DT cord-339886-th1da1bb 250 3 outbreak outbreak NN cord-339886-th1da1bb 250 4 scenario scenario NN cord-339886-th1da1bb 250 5 , , , cord-339886-th1da1bb 250 6 conflict conflict NN cord-339886-th1da1bb 250 7 may may MD cord-339886-th1da1bb 250 8 result result VB cord-339886-th1da1bb 250 9 from from IN cord-339886-th1da1bb 250 10 governments government NNS cord-339886-th1da1bb 250 11 wishing wish VBG cord-339886-th1da1bb 250 12 to to TO cord-339886-th1da1bb 250 13 keep keep VB cord-339886-th1da1bb 250 14 an an DT cord-339886-th1da1bb 250 15 outbreak outbreak NN cord-339886-th1da1bb 250 16 quiet quiet JJ cord-339886-th1da1bb 250 17 and/or and/or CC cord-339886-th1da1bb 250 18 from from IN cord-339886-th1da1bb 250 19 the the DT cord-339886-th1da1bb 250 20 tension tension NN cord-339886-th1da1bb 250 21 between between IN cord-339886-th1da1bb 250 22 lower low JJR cord-339886-th1da1bb 250 23 - - HYPH cord-339886-th1da1bb 250 24 income income NN cord-339886-th1da1bb 250 25 and and CC cord-339886-th1da1bb 250 26 middle middle JJ cord-339886-th1da1bb 250 27 - - HYPH cord-339886-th1da1bb 250 28 income income NN cord-339886-th1da1bb 250 29 countries country NNS cord-339886-th1da1bb 250 30 with with IN cord-339886-th1da1bb 250 31 few few JJ cord-339886-th1da1bb 250 32 resources resource NNS cord-339886-th1da1bb 250 33 for for IN cord-339886-th1da1bb 250 34 generating generate VBG cord-339886-th1da1bb 250 35 and and CC cord-339886-th1da1bb 250 36 using use VBG cord-339886-th1da1bb 250 37 data datum NNS cord-339886-th1da1bb 250 38 and and CC cord-339886-th1da1bb 250 39 the the DT cord-339886-th1da1bb 250 40 researchers researcher NNS cord-339886-th1da1bb 250 41 or or CC cord-339886-th1da1bb 250 42 response response NN cord-339886-th1da1bb 250 43 teams team NNS cord-339886-th1da1bb 250 44 from from IN cord-339886-th1da1bb 250 45 better well RBR cord-339886-th1da1bb 250 46 - - HYPH cord-339886-th1da1bb 250 47 resourced resource VBN cord-339886-th1da1bb 250 48 settings setting NNS cord-339886-th1da1bb 250 49 115 115 CD cord-339886-th1da1bb 250 50 . . . cord-339886-th1da1bb 251 1 Indeed indeed RB cord-339886-th1da1bb 251 2 , , , cord-339886-th1da1bb 251 3 the the DT cord-339886-th1da1bb 251 4 conflicting conflict VBG cord-339886-th1da1bb 251 5 values value NNS cord-339886-th1da1bb 251 6 in in IN cord-339886-th1da1bb 251 7 outbreak outbreak NN cord-339886-th1da1bb 251 8 responses response NNS cord-339886-th1da1bb 251 9 meet meet VBP cord-339886-th1da1bb 251 10 the the DT cord-339886-th1da1bb 251 11 definition definition NN cord-339886-th1da1bb 251 12 of of IN cord-339886-th1da1bb 251 13 a a DT cord-339886-th1da1bb 251 14 ' ' `` cord-339886-th1da1bb 251 15 wicked wicked JJ cord-339886-th1da1bb 251 16 ' ' '' cord-339886-th1da1bb 251 17 problem problem NN cord-339886-th1da1bb 251 18 , , , cord-339886-th1da1bb 251 19 where where WRB cord-339886-th1da1bb 251 20 issues issue NNS cord-339886-th1da1bb 251 21 resist resist VBP cord-339886-th1da1bb 251 22 simple simple JJ cord-339886-th1da1bb 251 23 resolution resolution NN cord-339886-th1da1bb 251 24 and and CC cord-339886-th1da1bb 251 25 span span VB cord-339886-th1da1bb 251 26 multiple multiple JJ cord-339886-th1da1bb 251 27 jurisdictions jurisdiction NNS cord-339886-th1da1bb 251 28 and and CC cord-339886-th1da1bb 251 29 where where WRB cord-339886-th1da1bb 251 30 each each DT cord-339886-th1da1bb 251 31 stakeholder stakeholder NN cord-339886-th1da1bb 251 32 has have VBZ cord-339886-th1da1bb 251 33 a a DT cord-339886-th1da1bb 251 34 different different JJ cord-339886-th1da1bb 251 35 perspective perspective NN cord-339886-th1da1bb 251 36 on on IN cord-339886-th1da1bb 251 37 the the DT cord-339886-th1da1bb 251 38 solution solution NN cord-339886-th1da1bb 251 39 . . . cord-339886-th1da1bb 252 1 Even even RB cord-339886-th1da1bb 252 2 the the DT cord-339886-th1da1bb 252 3 International International NNP cord-339886-th1da1bb 252 4 Health Health NNP cord-339886-th1da1bb 252 5 Regulations Regulations NNPS cord-339886-th1da1bb 252 6 ( ( -LRB- cord-339886-th1da1bb 252 7 IHR IHR NNP cord-339886-th1da1bb 252 8 ) ) -RRB- cord-339886-th1da1bb 252 9 , , , cord-339886-th1da1bb 252 10 which which WDT cord-339886-th1da1bb 252 11 ostensibly ostensibly RB cord-339886-th1da1bb 252 12 provide provide VBP cord-339886-th1da1bb 252 13 a a DT cord-339886-th1da1bb 252 14 legal legal JJ cord-339886-th1da1bb 252 15 instrument instrument NN cord-339886-th1da1bb 252 16 for for IN cord-339886-th1da1bb 252 17 global global JJ cord-339886-th1da1bb 252 18 health health NN cord-339886-th1da1bb 252 19 security security NN cord-339886-th1da1bb 252 20 , , , cord-339886-th1da1bb 252 21 fail fail VBP cord-339886-th1da1bb 252 22 to to TO cord-339886-th1da1bb 252 23 effect effect VB cord-339886-th1da1bb 252 24 a a DT cord-339886-th1da1bb 252 25 basic basic JJ cord-339886-th1da1bb 252 26 surveillance surveillance NN cord-339886-th1da1bb 252 27 and and CC cord-339886-th1da1bb 252 28 outbreak outbreak NN cord-339886-th1da1bb 252 29 response response NN cord-339886-th1da1bb 252 30 . . . cord-339886-th1da1bb 253 1 As as IN cord-339886-th1da1bb 253 2 of of IN cord-339886-th1da1bb 253 3 the the DT cord-339886-th1da1bb 253 4 most most RBS cord-339886-th1da1bb 253 5 recent recent JJ cord-339886-th1da1bb 253 6 self self NN cord-339886-th1da1bb 253 7 - - HYPH cord-339886-th1da1bb 253 8 reporting report VBG cord-339886-th1da1bb 253 9 , , , cord-339886-th1da1bb 253 10 only only RB cord-339886-th1da1bb 253 11 30 30 CD cord-339886-th1da1bb 253 12 % % NN cord-339886-th1da1bb 253 13 of of IN cord-339886-th1da1bb 253 14 the the DT cord-339886-th1da1bb 253 15 196 196 CD cord-339886-th1da1bb 253 16 member member NN cord-339886-th1da1bb 253 17 countries country NNS cord-339886-th1da1bb 253 18 of of IN cord-339886-th1da1bb 253 19 the the DT cord-339886-th1da1bb 253 20 IHR IHR NNP cord-339886-th1da1bb 253 21 are be VBP cord-339886-th1da1bb 253 22 in in IN cord-339886-th1da1bb 253 23 compliance compliance NN cord-339886-th1da1bb 253 24 , , , cord-339886-th1da1bb 253 25 meeting meet VBG cord-339886-th1da1bb 253 26 the the DT cord-339886-th1da1bb 253 27 prescribed prescribed JJ cord-339886-th1da1bb 253 28 minimum minimum JJ cord-339886-th1da1bb 253 29 public public JJ cord-339886-th1da1bb 253 30 health health NN cord-339886-th1da1bb 253 31 core core NN cord-339886-th1da1bb 253 32 capacities capacity NNS cord-339886-th1da1bb 253 33 5 5 CD cord-339886-th1da1bb 253 34 . . . cord-339886-th1da1bb 254 1 In in IN cord-339886-th1da1bb 254 2 these these DT cord-339886-th1da1bb 254 3 settings setting NNS cord-339886-th1da1bb 254 4 , , , cord-339886-th1da1bb 254 5 digital digital JJ cord-339886-th1da1bb 254 6 pathogen pathogen NN cord-339886-th1da1bb 254 7 surveillance surveillance NN cord-339886-th1da1bb 254 8 must must MD cord-339886-th1da1bb 254 9 be be VB cord-339886-th1da1bb 254 10 within within IN cord-339886-th1da1bb 254 11 the the DT cord-339886-th1da1bb 254 12 purview purview NN cord-339886-th1da1bb 254 13 of of IN cord-339886-th1da1bb 254 14 the the DT cord-339886-th1da1bb 254 15 larger large JJR cord-339886-th1da1bb 254 16 global global JJ cord-339886-th1da1bb 254 17 health health NN cord-339886-th1da1bb 254 18 community community NN cord-339886-th1da1bb 254 19 and and CC cord-339886-th1da1bb 254 20 its -PRON- PRP$ cord-339886-th1da1bb 254 21 diverse diverse JJ cord-339886-th1da1bb 254 22 group group NN cord-339886-th1da1bb 254 23 of of IN cord-339886-th1da1bb 254 24 non non JJ cord-339886-th1da1bb 254 25 - - JJ cord-339886-th1da1bb 254 26 state state JJ cord-339886-th1da1bb 254 27 actors actor NNS cord-339886-th1da1bb 254 28 rather rather RB cord-339886-th1da1bb 254 29 than than IN cord-339886-th1da1bb 254 30 being be VBG cord-339886-th1da1bb 254 31 solely solely RB cord-339886-th1da1bb 254 32 the the DT cord-339886-th1da1bb 254 33 responsibility responsibility NN cord-339886-th1da1bb 254 34 of of IN cord-339886-th1da1bb 254 35 nations nation NNS cord-339886-th1da1bb 254 36 themselves -PRON- PRP cord-339886-th1da1bb 254 37 116 116 CD cord-339886-th1da1bb 254 38 . . . cord-339886-th1da1bb 255 1 This this DT cord-339886-th1da1bb 255 2 raises raise VBZ cord-339886-th1da1bb 255 3 an an DT cord-339886-th1da1bb 255 4 important important JJ cord-339886-th1da1bb 255 5 issue issue NN cord-339886-th1da1bb 255 6 : : : cord-339886-th1da1bb 255 7 if if IN cord-339886-th1da1bb 255 8 nations nation NNS cord-339886-th1da1bb 255 9 are be VBP cord-339886-th1da1bb 255 10 willing willing JJ cord-339886-th1da1bb 255 11 to to TO cord-339886-th1da1bb 255 12 cede cede VB cord-339886-th1da1bb 255 13 a a DT cord-339886-th1da1bb 255 14 certain certain JJ cord-339886-th1da1bb 255 15 amount amount NN cord-339886-th1da1bb 255 16 of of IN cord-339886-th1da1bb 255 17 surveillance surveillance NN cord-339886-th1da1bb 255 18 and and CC cord-339886-th1da1bb 255 19 diag diag NNP cord-339886-th1da1bb 255 20 nostic nostic NNP cord-339886-th1da1bb 255 21 control control NN cord-339886-th1da1bb 255 22 Box Box NNP cord-339886-th1da1bb 255 23 1 1 CD cord-339886-th1da1bb 255 24 | | NNS cord-339886-th1da1bb 256 1 The the DT cord-339886-th1da1bb 256 2 Global Global NNP cord-339886-th1da1bb 256 3 Alliance Alliance NNP cord-339886-th1da1bb 256 4 for for IN cord-339886-th1da1bb 256 5 Genomics Genomics NNP cord-339886-th1da1bb 256 6 and and CC cord-339886-th1da1bb 256 7 Health Health NNP cord-339886-th1da1bb 256 8 ( ( -LRB- cord-339886-th1da1bb 256 9 GA4GH GA4GH NNP cord-339886-th1da1bb 256 10 ) ) -RRB- cord-339886-th1da1bb 256 11 framework framework NN cord-339886-th1da1bb 256 12 for for IN cord-339886-th1da1bb 256 13 genomic genomic JJ cord-339886-th1da1bb 256 14 data datum NNS cord-339886-th1da1bb 256 15 sharing sharing NN cord-339886-th1da1bb 257 1 In in IN cord-339886-th1da1bb 257 2 the the DT cord-339886-th1da1bb 257 3 1948 1948 CD cord-339886-th1da1bb 257 4 Universal Universal NNP cord-339886-th1da1bb 257 5 Declaration Declaration NNP cord-339886-th1da1bb 257 6 of of IN cord-339886-th1da1bb 257 7 Human Human NNP cord-339886-th1da1bb 257 8 Rights Rights NNPS cord-339886-th1da1bb 257 9 , , , cord-339886-th1da1bb 257 10 Article Article NNP cord-339886-th1da1bb 257 11 27 27 CD cord-339886-th1da1bb 257 12 outlines outline VBZ cord-339886-th1da1bb 257 13 the the DT cord-339886-th1da1bb 257 14 right right NN cord-339886-th1da1bb 257 15 of of IN cord-339886-th1da1bb 257 16 every every DT cord-339886-th1da1bb 257 17 individual individual NN cord-339886-th1da1bb 257 18 " " '' cord-339886-th1da1bb 257 19 to to TO cord-339886-th1da1bb 257 20 share share VB cord-339886-th1da1bb 257 21 in in IN cord-339886-th1da1bb 257 22 scientific scientific JJ cord-339886-th1da1bb 257 23 advancement advancement NN cord-339886-th1da1bb 257 24 and and CC cord-339886-th1da1bb 257 25 its -PRON- PRP$ cord-339886-th1da1bb 257 26 benefit benefit NN cord-339886-th1da1bb 257 27 " " '' cord-339886-th1da1bb 257 28 . . . cord-339886-th1da1bb 258 1 In in IN cord-339886-th1da1bb 258 2 this this DT cord-339886-th1da1bb 258 3 spirit spirit NN cord-339886-th1da1bb 258 4 , , , cord-339886-th1da1bb 258 5 the the DT cord-339886-th1da1bb 258 6 Global Global NNP cord-339886-th1da1bb 258 7 Alliance Alliance NNP cord-339886-th1da1bb 258 8 for for IN cord-339886-th1da1bb 258 9 Genomics Genomics NNP cord-339886-th1da1bb 258 10 and and CC cord-339886-th1da1bb 258 11 Health Health NNP cord-339886-th1da1bb 258 12 ( ( -LRB- cord-339886-th1da1bb 258 13 GA4GH GA4GH NNP cord-339886-th1da1bb 258 14 ) ) -RRB- cord-339886-th1da1bb 258 15 data data NN cord-339886-th1da1bb 258 16 - - HYPH cord-339886-th1da1bb 258 17 sharing share VBG cord-339886-th1da1bb 258 18 framework framework NN cord-339886-th1da1bb 258 19 119 119 CD cord-339886-th1da1bb 258 20 , , , cord-339886-th1da1bb 258 21 which which WDT cord-339886-th1da1bb 258 22 covers cover VBZ cord-339886-th1da1bb 258 23 data data NN cord-339886-th1da1bb 258 24 donors donor NNS cord-339886-th1da1bb 258 25 , , , cord-339886-th1da1bb 258 26 producers producer NNS cord-339886-th1da1bb 258 27 and and CC cord-339886-th1da1bb 258 28 users user NNS cord-339886-th1da1bb 258 29 , , , cord-339886-th1da1bb 258 30 is be VBZ cord-339886-th1da1bb 258 31 guided guide VBN cord-339886-th1da1bb 258 32 by by IN cord-339886-th1da1bb 258 33 the the DT cord-339886-th1da1bb 258 34 principles principle NNS cord-339886-th1da1bb 258 35 of of IN cord-339886-th1da1bb 258 36 privacy privacy NN cord-339886-th1da1bb 258 37 , , , cord-339886-th1da1bb 258 38 fairness fairness NN cord-339886-th1da1bb 258 39 and and CC cord-339886-th1da1bb 258 40 non non JJ cord-339886-th1da1bb 258 41 - - JJ cord-339886-th1da1bb 258 42 discrimination discrimination NN cord-339886-th1da1bb 258 43 and and CC cord-339886-th1da1bb 258 44 has have VBZ cord-339886-th1da1bb 258 45 as as IN cord-339886-th1da1bb 258 46 its -PRON- PRP$ cord-339886-th1da1bb 258 47 goal goal NN cord-339886-th1da1bb 258 48 the the DT cord-339886-th1da1bb 258 49 promotion promotion NN cord-339886-th1da1bb 258 50 of of IN cord-339886-th1da1bb 258 51 health health NN cord-339886-th1da1bb 258 52 and and CC cord-339886-th1da1bb 258 53 well well RB cord-339886-th1da1bb 258 54 - - HYPH cord-339886-th1da1bb 258 55 being being NN cord-339886-th1da1bb 258 56 and and CC cord-339886-th1da1bb 258 57 the the DT cord-339886-th1da1bb 258 58 fair fair JJ cord-339886-th1da1bb 258 59 distribution distribution NN cord-339886-th1da1bb 258 60 of of IN cord-339886-th1da1bb 258 61 benefits benefit NNS cord-339886-th1da1bb 258 62 arising arise VBG cord-339886-th1da1bb 258 63 from from IN cord-339886-th1da1bb 258 64 genomic genomic JJ cord-339886-th1da1bb 258 65 research research NN cord-339886-th1da1bb 258 66 . . . cord-339886-th1da1bb 259 1 The the DT cord-339886-th1da1bb 259 2 core core NN cord-339886-th1da1bb 259 3 elements element NNS cord-339886-th1da1bb 259 4 of of IN cord-339886-th1da1bb 259 5 the the DT cord-339886-th1da1bb 259 6 framework framework NN cord-339886-th1da1bb 259 7 include include VBP cord-339886-th1da1bb 259 8 the the DT cord-339886-th1da1bb 259 9 following follow VBG cord-339886-th1da1bb 259 10 : : : cord-339886-th1da1bb 259 11 • • XX cord-339886-th1da1bb 260 1 Transparency transparency NN cord-339886-th1da1bb 260 2 : : : cord-339886-th1da1bb 260 3 knowing know VBG cord-339886-th1da1bb 260 4 how how WRB cord-339886-th1da1bb 260 5 the the DT cord-339886-th1da1bb 260 6 data datum NNS cord-339886-th1da1bb 260 7 will will MD cord-339886-th1da1bb 260 8 be be VB cord-339886-th1da1bb 260 9 handled handle VBN cord-339886-th1da1bb 260 10 , , , cord-339886-th1da1bb 260 11 accessed access VBN cord-339886-th1da1bb 260 12 and and CC cord-339886-th1da1bb 260 13 exchanged exchange VBD cord-339886-th1da1bb 260 14 • • NNP cord-339886-th1da1bb 260 15 Accountability accountability NN cord-339886-th1da1bb 260 16 : : : cord-339886-th1da1bb 260 17 tracking tracking NN cord-339886-th1da1bb 260 18 of of IN cord-339886-th1da1bb 260 19 data datum NNS cord-339886-th1da1bb 260 20 access access NN cord-339886-th1da1bb 260 21 and and CC cord-339886-th1da1bb 260 22 mechanisms mechanism NNS cord-339886-th1da1bb 260 23 for for IN cord-339886-th1da1bb 260 24 addressing address VBG cord-339886-th1da1bb 260 25 misuse misuse NN cord-339886-th1da1bb 260 26 • • NNP cord-339886-th1da1bb 260 27 Engagement engagement NN cord-339886-th1da1bb 260 28 : : : cord-339886-th1da1bb 260 29 involving involve VBG cord-339886-th1da1bb 260 30 citizens citizen NNS cord-339886-th1da1bb 260 31 and and CC cord-339886-th1da1bb 260 32 facilitating facilitate VBG cord-339886-th1da1bb 260 33 dialogue dialogue NN cord-339886-th1da1bb 260 34 and and CC cord-339886-th1da1bb 260 35 deliberation deliberation NN cord-339886-th1da1bb 260 36 around around IN cord-339886-th1da1bb 260 37 the the DT cord-339886-th1da1bb 260 38 societal societal JJ cord-339886-th1da1bb 260 39 implications implication NNS cord-339886-th1da1bb 260 40 of of IN cord-339886-th1da1bb 260 41 data datum NNS cord-339886-th1da1bb 260 42 sharing share VBG cord-339886-th1da1bb 260 43 • • NNP cord-339886-th1da1bb 260 44 Quality quality NN cord-339886-th1da1bb 260 45 and and CC cord-339886-th1da1bb 260 46 security security NN cord-339886-th1da1bb 260 47 : : : cord-339886-th1da1bb 260 48 mitigating mitigate VBG cord-339886-th1da1bb 260 49 unauthorized unauthorized JJ cord-339886-th1da1bb 260 50 access access NN cord-339886-th1da1bb 260 51 and and CC cord-339886-th1da1bb 260 52 implementing implement VBG cord-339886-th1da1bb 260 53 an an DT cord-339886-th1da1bb 260 54 unbiased unbiased JJ cord-339886-th1da1bb 260 55 approach approach NN cord-339886-th1da1bb 260 56 to to IN cord-339886-th1da1bb 260 57 storing store VBG cord-339886-th1da1bb 260 58 and and CC cord-339886-th1da1bb 260 59 processing processing NN cord-339886-th1da1bb 260 60 data datum NNS cord-339886-th1da1bb 261 1 • • NNP cord-339886-th1da1bb 262 1 Privacy privacy NN cord-339886-th1da1bb 262 2 , , , cord-339886-th1da1bb 262 3 data datum NNS cord-339886-th1da1bb 262 4 protection protection NN cord-339886-th1da1bb 262 5 and and CC cord-339886-th1da1bb 262 6 confidentiality confidentiality NN cord-339886-th1da1bb 262 7 : : : cord-339886-th1da1bb 262 8 complying comply VBG cord-339886-th1da1bb 262 9 with with IN cord-339886-th1da1bb 262 10 the the DT cord-339886-th1da1bb 262 11 relevant relevant JJ cord-339886-th1da1bb 262 12 regulations regulation NNS cord-339886-th1da1bb 262 13 at at IN cord-339886-th1da1bb 262 14 every every DT cord-339886-th1da1bb 262 15 stage stage NN cord-339886-th1da1bb 263 1 • • NNP cord-339886-th1da1bb 264 1 Risk risk NN cord-339886-th1da1bb 264 2 - - HYPH cord-339886-th1da1bb 264 3 benefit benefit NN cord-339886-th1da1bb 264 4 analysis analysis NN cord-339886-th1da1bb 264 5 : : : cord-339886-th1da1bb 265 1 weighing weigh VBG cord-339886-th1da1bb 265 2 benefits benefit NNS cord-339886-th1da1bb 265 3 ( ( -LRB- cord-339886-th1da1bb 265 4 including include VBG cord-339886-th1da1bb 265 5 new new JJ cord-339886-th1da1bb 265 6 knowledge knowledge NN cord-339886-th1da1bb 265 7 , , , cord-339886-th1da1bb 265 8 efficiencies efficiency NNS cord-339886-th1da1bb 265 9 and and CC cord-339886-th1da1bb 265 10 informed informed JJ cord-339886-th1da1bb 265 11 decision decision NN cord-339886-th1da1bb 265 12 making make VBG cord-339886-th1da1bb 265 13 ) ) -RRB- cord-339886-th1da1bb 265 14 against against IN cord-339886-th1da1bb 265 15 risks risk NNS cord-339886-th1da1bb 265 16 ( ( -LRB- cord-339886-th1da1bb 265 17 including include VBG cord-339886-th1da1bb 265 18 invasion invasion NN cord-339886-th1da1bb 265 19 of of IN cord-339886-th1da1bb 265 20 privacy privacy NN cord-339886-th1da1bb 265 21 and and CC cord-339886-th1da1bb 265 22 breaches breach NNS cord-339886-th1da1bb 265 23 of of IN cord-339886-th1da1bb 265 24 confidentiality confidentiality NN cord-339886-th1da1bb 265 25 ) ) -RRB- cord-339886-th1da1bb 265 26 , , , cord-339886-th1da1bb 265 27 minimizing minimize VBG cord-339886-th1da1bb 265 28 harm harm NN cord-339886-th1da1bb 265 29 and and CC cord-339886-th1da1bb 265 30 maximizing maximizing NN cord-339886-th1da1bb 265 31 benefit benefit NN cord-339886-th1da1bb 265 32 at at IN cord-339886-th1da1bb 265 33 the the DT cord-339886-th1da1bb 265 34 individual individual JJ cord-339886-th1da1bb 265 35 and and CC cord-339886-th1da1bb 265 36 societal societal JJ cord-339886-th1da1bb 265 37 levels level NNS cord-339886-th1da1bb 266 1 • • NNP cord-339886-th1da1bb 267 1 Recognition recognition NN cord-339886-th1da1bb 267 2 and and CC cord-339886-th1da1bb 267 3 attribution attribution NN cord-339886-th1da1bb 267 4 : : : cord-339886-th1da1bb 267 5 ensuring ensure VBG cord-339886-th1da1bb 267 6 recognition recognition NN cord-339886-th1da1bb 267 7 is be VBZ cord-339886-th1da1bb 267 8 meaningful meaningful JJ cord-339886-th1da1bb 267 9 to to IN cord-339886-th1da1bb 267 10 participants participant NNS cord-339886-th1da1bb 267 11 , , , cord-339886-th1da1bb 267 12 providing provide VBG cord-339886-th1da1bb 267 13 due due JJ cord-339886-th1da1bb 267 14 credit credit NN cord-339886-th1da1bb 267 15 to to IN cord-339886-th1da1bb 267 16 all all DT cord-339886-th1da1bb 267 17 who who WP cord-339886-th1da1bb 267 18 shared share VBD cord-339886-th1da1bb 267 19 data datum NNS cord-339886-th1da1bb 267 20 and and CC cord-339886-th1da1bb 267 21 ensuring ensure VBG cord-339886-th1da1bb 267 22 credit credit NN cord-339886-th1da1bb 267 23 is be VBZ cord-339886-th1da1bb 267 24 given give VBN cord-339886-th1da1bb 267 25 for for IN cord-339886-th1da1bb 267 26 both both CC cord-339886-th1da1bb 267 27 primary primary JJ cord-339886-th1da1bb 267 28 and and CC cord-339886-th1da1bb 267 29 secondary secondary JJ cord-339886-th1da1bb 267 30 data data NN cord-339886-th1da1bb 267 31 use use NN cord-339886-th1da1bb 268 1 • • NNP cord-339886-th1da1bb 268 2 Sustainability Sustainability NNP cord-339886-th1da1bb 268 3 : : : cord-339886-th1da1bb 268 4 implementing implement VBG cord-339886-th1da1bb 268 5 systems system NNS cord-339886-th1da1bb 268 6 for for IN cord-339886-th1da1bb 268 7 archiving archiving NN cord-339886-th1da1bb 268 8 and and CC cord-339886-th1da1bb 268 9 retrieval retrieval NN cord-339886-th1da1bb 269 1 • • NNP cord-339886-th1da1bb 269 2 Education education NN cord-339886-th1da1bb 269 3 and and CC cord-339886-th1da1bb 269 4 training training NN cord-339886-th1da1bb 269 5 : : : cord-339886-th1da1bb 269 6 advancing advance VBG cord-339886-th1da1bb 269 7 data datum NNS cord-339886-th1da1bb 269 8 sharing sharing NN cord-339886-th1da1bb 269 9 , , , cord-339886-th1da1bb 269 10 improving improve VBG cord-339886-th1da1bb 269 11 data datum NNS cord-339886-th1da1bb 269 12 quality quality NN cord-339886-th1da1bb 269 13 , , , cord-339886-th1da1bb 269 14 educating educate VBG cord-339886-th1da1bb 269 15 people people NNS cord-339886-th1da1bb 269 16 on on IN cord-339886-th1da1bb 269 17 why why WRB cord-339886-th1da1bb 269 18 data datum NNS cord-339886-th1da1bb 269 19 sharing sharing NN cord-339886-th1da1bb 269 20 matters matter NNS cord-339886-th1da1bb 269 21 , , , cord-339886-th1da1bb 269 22 and and CC cord-339886-th1da1bb 269 23 building building NN cord-339886-th1da1bb 269 24 capacity capacity NN cord-339886-th1da1bb 270 1 • • NNP cord-339886-th1da1bb 271 1 Accessibility accessibility NN cord-339886-th1da1bb 271 2 and and CC cord-339886-th1da1bb 271 3 dissemination dissemination NN cord-339886-th1da1bb 271 4 : : : cord-339886-th1da1bb 271 5 maximizing maximize VBG cord-339886-th1da1bb 271 6 accessibility accessibility NN cord-339886-th1da1bb 271 7 , , , cord-339886-th1da1bb 271 8 promoting promote VBG cord-339886-th1da1bb 271 9 collaboration collaboration NN cord-339886-th1da1bb 271 10 and and CC cord-339886-th1da1bb 271 11 using use VBG cord-339886-th1da1bb 271 12 publication publication NN cord-339886-th1da1bb 271 13 and and CC cord-339886-th1da1bb 271 14 digital digital JJ cord-339886-th1da1bb 271 15 dissemination dissemination NN cord-339886-th1da1bb 271 16 to to TO cord-339886-th1da1bb 271 17 share share VB cord-339886-th1da1bb 271 18 results result NNS cord-339886-th1da1bb 271 19 to to IN cord-339886-th1da1bb 271 20 the the DT cord-339886-th1da1bb 271 21 global global JJ cord-339886-th1da1bb 271 22 health health NN cord-339886-th1da1bb 271 23 community community NN cord-339886-th1da1bb 271 24 , , , cord-339886-th1da1bb 271 25 the the DT cord-339886-th1da1bb 271 26 notion notion NN cord-339886-th1da1bb 271 27 of of IN cord-339886-th1da1bb 271 28 reciprocity reciprocity NN cord-339886-th1da1bb 271 29 suggests suggest VBZ cord-339886-th1da1bb 271 30 that that IN cord-339886-th1da1bb 271 31 they -PRON- PRP cord-339886-th1da1bb 271 32 should should MD cord-339886-th1da1bb 271 33 derive derive VB cord-339886-th1da1bb 271 34 some some DT cord-339886-th1da1bb 271 35 corresponding correspond VBG cord-339886-th1da1bb 271 36 local local JJ cord-339886-th1da1bb 271 37 benefit benefit NN cord-339886-th1da1bb 271 38 . . . cord-339886-th1da1bb 272 1 The the DT cord-339886-th1da1bb 272 2 ' ' `` cord-339886-th1da1bb 272 3 trickle trickle NN cord-339886-th1da1bb 272 4 - - HYPH cord-339886-th1da1bb 272 5 down down NN cord-339886-th1da1bb 272 6 ' ' '' cord-339886-th1da1bb 272 7 effects effect NNS cord-339886-th1da1bb 272 8 of of IN cord-339886-th1da1bb 272 9 global global JJ cord-339886-th1da1bb 272 10 genomic genomic JJ cord-339886-th1da1bb 272 11 surveillance surveillance NN cord-339886-th1da1bb 272 12 have have VBP cord-339886-th1da1bb 272 13 yet yet RB cord-339886-th1da1bb 272 14 to to TO cord-339886-th1da1bb 272 15 be be VB cord-339886-th1da1bb 272 16 fully fully RB cord-339886-th1da1bb 272 17 articulated articulate VBN cord-339886-th1da1bb 272 18 , , , cord-339886-th1da1bb 272 19 but but CC cord-339886-th1da1bb 272 20 they -PRON- PRP cord-339886-th1da1bb 272 21 are be VBP cord-339886-th1da1bb 272 22 likely likely JJ cord-339886-th1da1bb 272 23 to to TO cord-339886-th1da1bb 272 24 be be VB cord-339886-th1da1bb 272 25 realized realize VBN cord-339886-th1da1bb 272 26 first first RB cord-339886-th1da1bb 272 27 in in IN cord-339886-th1da1bb 272 28 the the DT cord-339886-th1da1bb 272 29 zoonotic zoonotic JJ cord-339886-th1da1bb 272 30 domain domain NN cord-339886-th1da1bb 272 31 , , , cord-339886-th1da1bb 272 32 where where WRB cord-339886-th1da1bb 272 33 global global JJ cord-339886-th1da1bb 272 34 surveillance surveillance NN cord-339886-th1da1bb 272 35 efforts effort NNS cord-339886-th1da1bb 272 36 will will MD cord-339886-th1da1bb 272 37 feed feed VB cord-339886-th1da1bb 272 38 back back RB cord-339886-th1da1bb 272 39 into into IN cord-339886-th1da1bb 272 40 improved improved JJ cord-339886-th1da1bb 272 41 animal animal NN cord-339886-th1da1bb 272 42 health health NN cord-339886-th1da1bb 272 43 at at IN cord-339886-th1da1bb 272 44 a a DT cord-339886-th1da1bb 272 45 local local JJ cord-339886-th1da1bb 272 46 level level NN cord-339886-th1da1bb 272 47 , , , cord-339886-th1da1bb 272 48 in in IN cord-339886-th1da1bb 272 49 turn turn NN cord-339886-th1da1bb 272 50 benefiting benefit VBG cord-339886-th1da1bb 272 51 local local JJ cord-339886-th1da1bb 272 52 farmers farmer NNS cord-339886-th1da1bb 272 53 . . . cord-339886-th1da1bb 273 1 Outbreaks outbreak NNS cord-339886-th1da1bb 273 2 occur occur VBP cord-339886-th1da1bb 273 3 at at IN cord-339886-th1da1bb 273 4 the the DT cord-339886-th1da1bb 273 5 intersection intersection NN cord-339886-th1da1bb 273 6 of of IN cord-339886-th1da1bb 273 7 risk risk NN cord-339886-th1da1bb 273 8 perception perception NN cord-339886-th1da1bb 273 9 , , , cord-339886-th1da1bb 273 10 governance governance NN cord-339886-th1da1bb 273 11 , , , cord-339886-th1da1bb 273 12 policy policy NN cord-339886-th1da1bb 273 13 and and CC cord-339886-th1da1bb 273 14 economics economic NNS cord-339886-th1da1bb 273 15 117 117 CD cord-339886-th1da1bb 273 16 , , , cord-339886-th1da1bb 273 17 and and CC cord-339886-th1da1bb 273 18 outbreak outbreak NN cord-339886-th1da1bb 273 19 response response NN cord-339886-th1da1bb 273 20 is be VBZ cord-339886-th1da1bb 273 21 often often RB cord-339886-th1da1bb 273 22 based base VBN cord-339886-th1da1bb 273 23 on on IN cord-339886-th1da1bb 273 24 political political JJ cord-339886-th1da1bb 273 25 instinct instinct NN cord-339886-th1da1bb 273 26 rather rather RB cord-339886-th1da1bb 273 27 than than IN cord-339886-th1da1bb 273 28 data datum NNS cord-339886-th1da1bb 273 29 5 5 CD cord-339886-th1da1bb 273 30 . . . cord-339886-th1da1bb 274 1 Building build VBG cord-339886-th1da1bb 274 2 a a DT cord-339886-th1da1bb 274 3 resilient resilient JJ cord-339886-th1da1bb 274 4 and and CC cord-339886-th1da1bb 274 5 responsive responsive JJ cord-339886-th1da1bb 274 6 public public JJ cord-339886-th1da1bb 274 7 health health NN cord-339886-th1da1bb 274 8 system system NN cord-339886-th1da1bb 274 9 is be VBZ cord-339886-th1da1bb 274 10 therefore therefore RB cord-339886-th1da1bb 274 11 more more JJR cord-339886-th1da1bb 274 12 than than IN cord-339886-th1da1bb 274 13 just just RB cord-339886-th1da1bb 274 14 enhancing enhance VBG cord-339886-th1da1bb 274 15 surveillance surveillance NN cord-339886-th1da1bb 274 16 and and CC cord-339886-th1da1bb 274 17 coupling couple VBG cord-339886-th1da1bb 274 18 it -PRON- PRP cord-339886-th1da1bb 274 19 to to IN cord-339886-th1da1bb 274 20 novel novel NN cord-339886-th1da1bb 274 21 technology technology NN cord-339886-th1da1bb 274 22 -it -it : cord-339886-th1da1bb 274 23 is be VBZ cord-339886-th1da1bb 274 24 about about IN cord-339886-th1da1bb 274 25 engagement engagement NN cord-339886-th1da1bb 274 26 , , , cord-339886-th1da1bb 274 27 trust trust NN cord-339886-th1da1bb 274 28 , , , cord-339886-th1da1bb 274 29 cooperation cooperation NN cord-339886-th1da1bb 274 30 and and CC cord-339886-th1da1bb 274 31 building build VBG cord-339886-th1da1bb 274 32 local local JJ cord-339886-th1da1bb 274 33 capacity capacity NN cord-339886-th1da1bb 274 34 8 8 CD cord-339886-th1da1bb 274 35 , , , cord-339886-th1da1bb 274 36 as as RB cord-339886-th1da1bb 274 37 well well RB cord-339886-th1da1bb 274 38 as as IN cord-339886-th1da1bb 274 39 a a DT cord-339886-th1da1bb 274 40 focus focus NN cord-339886-th1da1bb 274 41 on on IN cord-339886-th1da1bb 274 42 pandemic pandemic JJ cord-339886-th1da1bb 274 43 prevention prevention NN cord-339886-th1da1bb 274 44 through through IN cord-339886-th1da1bb 274 45 development development NN cord-339886-th1da1bb 274 46 rather rather RB cord-339886-th1da1bb 274 47 than than IN cord-339886-th1da1bb 274 48 pandemic pandemic JJ cord-339886-th1da1bb 274 49 response response NN cord-339886-th1da1bb 274 50 via via IN cord-339886-th1da1bb 274 51 disaster disaster NN cord-339886-th1da1bb 274 52 relief relief NN cord-339886-th1da1bb 274 53 mechanisms mechanism NNS cord-339886-th1da1bb 274 54 57 57 CD cord-339886-th1da1bb 274 55 . . . cord-339886-th1da1bb 275 1 Expert expert NN cord-339886-th1da1bb 275 2 panels panel NNS cord-339886-th1da1bb 275 3 convened convene VBN cord-339886-th1da1bb 275 4 by by IN cord-339886-th1da1bb 275 5 Harvard Harvard NNP cord-339886-th1da1bb 275 6 and and CC cord-339886-th1da1bb 275 7 the the DT cord-339886-th1da1bb 275 8 London London NNP cord-339886-th1da1bb 275 9 School School NNP cord-339886-th1da1bb 275 10 of of IN cord-339886-th1da1bb 275 11 Hygiene Hygiene NNP cord-339886-th1da1bb 275 12 and and CC cord-339886-th1da1bb 275 13 Tropical Tropical NNP cord-339886-th1da1bb 275 14 Medicine Medicine NNP cord-339886-th1da1bb 275 15 9 9 CD cord-339886-th1da1bb 275 16 and and CC cord-339886-th1da1bb 275 17 by by IN cord-339886-th1da1bb 275 18 the the DT cord-339886-th1da1bb 275 19 National National NNP cord-339886-th1da1bb 275 20 Academy Academy NNP cord-339886-th1da1bb 275 21 of of IN cord-339886-th1da1bb 275 22 Medicine Medicine NNP cord-339886-th1da1bb 275 23 8 8 CD cord-339886-th1da1bb 275 24 have have VBP cord-339886-th1da1bb 275 25 called call VBN cord-339886-th1da1bb 275 26 for for IN cord-339886-th1da1bb 275 27 a a DT cord-339886-th1da1bb 275 28 central central JJ cord-339886-th1da1bb 275 29 pandemic pandemic NN cord-339886-th1da1bb 275 30 preparedness preparedness NN cord-339886-th1da1bb 275 31 and and CC cord-339886-th1da1bb 275 32 response response NN cord-339886-th1da1bb 275 33 agency agency NN cord-339886-th1da1bb 275 34 and and CC cord-339886-th1da1bb 275 35 also also RB cord-339886-th1da1bb 275 36 underscored underscore VBD cord-339886-th1da1bb 275 37 the the DT cord-339886-th1da1bb 275 38 need need NN cord-339886-th1da1bb 275 39 for for IN cord-339886-th1da1bb 275 40 deeper deep JJR cord-339886-th1da1bb 275 41 partnerships partnership NNS cord-339886-th1da1bb 275 42 between between IN cord-339886-th1da1bb 275 43 formal formal JJ cord-339886-th1da1bb 275 44 and and CC cord-339886-th1da1bb 275 45 informal informal JJ cord-339886-th1da1bb 275 46 surveillance surveillance NN cord-339886-th1da1bb 275 47 , , , cord-339886-th1da1bb 275 48 epidemiology epidemiology NN cord-339886-th1da1bb 275 49 and and CC cord-339886-th1da1bb 275 50 academic academic JJ cord-339886-th1da1bb 275 51 and and CC cord-339886-th1da1bb 275 52 public public JJ cord-339886-th1da1bb 275 53 health health NN cord-339886-th1da1bb 275 54 networks network NNS cord-339886-th1da1bb 275 55 5 5 CD cord-339886-th1da1bb 275 56 . . . cord-339886-th1da1bb 276 1 More more RBR cord-339886-th1da1bb 276 2 recently recently RB cord-339886-th1da1bb 276 3 , , , cord-339886-th1da1bb 276 4 evolutionary evolutionary JJ cord-339886-th1da1bb 276 5 biologist biologist NN cord-339886-th1da1bb 276 6 Michael Michael NNP cord-339886-th1da1bb 276 7 Worobey Worobey NNP cord-339886-th1da1bb 276 8 wrote write VBD cord-339886-th1da1bb 276 9 : : : cord-339886-th1da1bb 276 10 " " `` cord-339886-th1da1bb 276 11 Systematic systematic JJ cord-339886-th1da1bb 276 12 pathogen pathogen NN cord-339886-th1da1bb 276 13 surveillance surveillance NN cord-339886-th1da1bb 276 14 is be VBZ cord-339886-th1da1bb 276 15 within within IN cord-339886-th1da1bb 276 16 our -PRON- PRP$ cord-339886-th1da1bb 276 17 grasp grasp NN cord-339886-th1da1bb 276 18 , , , cord-339886-th1da1bb 276 19 but but CC cord-339886-th1da1bb 276 20 is be VBZ cord-339886-th1da1bb 276 21 still still RB cord-339886-th1da1bb 276 22 undervalued undervalue VBN cord-339886-th1da1bb 276 23 and and CC cord-339886-th1da1bb 276 24 underfunded underfunded JJ cord-339886-th1da1bb 276 25 relative relative NN cord-339886-th1da1bb 276 26 to to IN cord-339886-th1da1bb 276 27 the the DT cord-339886-th1da1bb 276 28 magnitude magnitude NN cord-339886-th1da1bb 276 29 of of IN cord-339886-th1da1bb 276 30 the the DT cord-339886-th1da1bb 276 31 threat threat NN cord-339886-th1da1bb 276 32 " " '' cord-339886-th1da1bb 276 33 ( ( -LRB- cord-339886-th1da1bb 276 34 REF ref NN cord-339886-th1da1bb 276 35 . . . cord-339886-th1da1bb 276 36 118 118 CD cord-339886-th1da1bb 276 37 ) ) -RRB- cord-339886-th1da1bb 276 38 . . . cord-339886-th1da1bb 277 1 If if IN cord-339886-th1da1bb 277 2 we -PRON- PRP cord-339886-th1da1bb 277 3 are be VBP cord-339886-th1da1bb 277 4 to to TO cord-339886-th1da1bb 277 5 achieve achieve VB cord-339886-th1da1bb 277 6 the the DT cord-339886-th1da1bb 277 7 sequencing sequencing NN cord-339886-th1da1bb 277 8 singularity singularity NN cord-339886-th1da1bb 277 9 -the -the DT cord-339886-th1da1bb 277 10 moment moment NN cord-339886-th1da1bb 277 11 at at IN cord-339886-th1da1bb 277 12 which which WDT cord-339886-th1da1bb 277 13 pathogen pathogen NN cord-339886-th1da1bb 277 14 , , , cord-339886-th1da1bb 277 15 environmental environmental JJ cord-339886-th1da1bb 277 16 and and CC cord-339886-th1da1bb 277 17 digital digital JJ cord-339886-th1da1bb 277 18 data datum NNS cord-339886-th1da1bb 277 19 streams stream NNS cord-339886-th1da1bb 277 20 are be VBP cord-339886-th1da1bb 277 21 integrated integrate VBN cord-339886-th1da1bb 277 22 into into IN cord-339886-th1da1bb 277 23 a a DT cord-339886-th1da1bb 277 24 global global JJ cord-339886-th1da1bb 277 25 surveillance surveillance NN cord-339886-th1da1bb 277 26 system system NN cord-339886-th1da1bb 277 27 -we -we : cord-339886-th1da1bb 277 28 require require VBP cord-339886-th1da1bb 277 29 a a DT cord-339886-th1da1bb 277 30 community community NN cord-339886-th1da1bb 277 31 united unite VBN cord-339886-th1da1bb 277 32 behind behind IN cord-339886-th1da1bb 277 33 a a DT cord-339886-th1da1bb 277 34 vision vision NN cord-339886-th1da1bb 277 35 in in IN cord-339886-th1da1bb 277 36 which which WDT cord-339886-th1da1bb 277 37 public public JJ cord-339886-th1da1bb 277 38 health health NN cord-339886-th1da1bb 277 39 and and CC cord-339886-th1da1bb 277 40 the the DT cord-339886-th1da1bb 277 41 attendant attendant JJ cord-339886-th1da1bb 277 42 data datum NNS cord-339886-th1da1bb 277 43 belong belong VBP cord-339886-th1da1bb 277 44 to to IN cord-339886-th1da1bb 277 45 the the DT cord-339886-th1da1bb 277 46 public public NN cord-339886-th1da1bb 277 47 and and CC cord-339886-th1da1bb 277 48 behind behind IN cord-339886-th1da1bb 277 49 the the DT cord-339886-th1da1bb 277 50 idea idea NN cord-339886-th1da1bb 277 51 that that IN cord-339886-th1da1bb 277 52 we -PRON- PRP cord-339886-th1da1bb 277 53 are be VBP cord-339886-th1da1bb 277 54 a a DT cord-339886-th1da1bb 277 55 better well JJR cord-339886-th1da1bb 277 56 , , , cord-339886-th1da1bb 277 57 healthier healthy JJR cord-339886-th1da1bb 277 58 society society NN cord-339886-th1da1bb 277 59 when when WRB cord-339886-th1da1bb 277 60 the the DT cord-339886-th1da1bb 277 61 public public NN cord-339886-th1da1bb 277 62 is be VBZ cord-339886-th1da1bb 277 63 able able JJ cord-339886-th1da1bb 277 64 to to TO cord-339886-th1da1bb 277 65 access access VB cord-339886-th1da1bb 277 66 and and CC cord-339886-th1da1bb 277 67 benefit benefit VB cord-339886-th1da1bb 277 68 from from IN cord-339886-th1da1bb 277 69 the the DT cord-339886-th1da1bb 277 70 data datum NNS cord-339886-th1da1bb 277 71 being be VBG cord-339886-th1da1bb 277 72 collected collect VBN cord-339886-th1da1bb 277 73 about about IN cord-339886-th1da1bb 277 74 us -PRON- PRP cord-339886-th1da1bb 277 75 and and CC cord-339886-th1da1bb 277 76 the the DT cord-339886-th1da1bb 277 77 pathogens pathogen NNS cord-339886-th1da1bb 277 78 we -PRON- PRP cord-339886-th1da1bb 277 79 share share VBP cord-339886-th1da1bb 277 80 the the DT cord-339886-th1da1bb 277 81 planet planet NN cord-339886-th1da1bb 277 82 with with IN cord-339886-th1da1bb 277 83 . . . cord-339886-th1da1bb 278 1 Virus virus NN cord-339886-th1da1bb 278 2 genomes genome NNS cord-339886-th1da1bb 278 3 reveal reveal VBP cord-339886-th1da1bb 278 4 factors factor NNS cord-339886-th1da1bb 278 5 that that WDT cord-339886-th1da1bb 278 6 spread spread VBP cord-339886-th1da1bb 278 7 and and CC cord-339886-th1da1bb 278 8 sustained sustain VBD cord-339886-th1da1bb 278 9 the the DT cord-339886-th1da1bb 278 10 Ebola Ebola NNP cord-339886-th1da1bb 278 11 epidemic epidemic NN cord-339886-th1da1bb 278 12 Zika Zika NNP cord-339886-th1da1bb 278 13 virus virus NN cord-339886-th1da1bb 278 14 in in IN cord-339886-th1da1bb 278 15 the the DT cord-339886-th1da1bb 278 16 Americas Americas NNPS cord-339886-th1da1bb 278 17 : : : cord-339886-th1da1bb 278 18 Early early JJ cord-339886-th1da1bb 278 19 epidemiological epidemiological JJ cord-339886-th1da1bb 278 20 and and CC cord-339886-th1da1bb 278 21 genetic genetic JJ cord-339886-th1da1bb 278 22 findings finding NNS cord-339886-th1da1bb 279 1 This this DT cord-339886-th1da1bb 279 2 work work NN cord-339886-th1da1bb 279 3 is be VBZ cord-339886-th1da1bb 279 4 the the DT cord-339886-th1da1bb 279 5 first first JJ cord-339886-th1da1bb 279 6 to to TO cord-339886-th1da1bb 279 7 leverage leverage VB cord-339886-th1da1bb 279 8 genome genome NN cord-339886-th1da1bb 279 9 sequences sequence NNS cord-339886-th1da1bb 279 10 generated generate VBN cord-339886-th1da1bb 279 11 early early RB cord-339886-th1da1bb 279 12 in in IN cord-339886-th1da1bb 279 13 the the DT cord-339886-th1da1bb 279 14 Zika Zika NNP cord-339886-th1da1bb 279 15 outbreak outbreak NN cord-339886-th1da1bb 279 16 to to TO cord-339886-th1da1bb 279 17 provide provide VB cord-339886-th1da1bb 279 18 a a DT cord-339886-th1da1bb 279 19 real real JJ cord-339886-th1da1bb 279 20 - - HYPH cord-339886-th1da1bb 279 21 time time NN cord-339886-th1da1bb 279 22 glimpse glimpse NN cord-339886-th1da1bb 279 23 into into IN cord-339886-th1da1bb 279 24 the the DT cord-339886-th1da1bb 279 25 spread spread NN cord-339886-th1da1bb 279 26 of of IN cord-339886-th1da1bb 279 27 the the DT cord-339886-th1da1bb 279 28 virus virus NN cord-339886-th1da1bb 279 29 Establishment Establishment NNP cord-339886-th1da1bb 279 30 and and CC cord-339886-th1da1bb 279 31 cryptic cryptic JJ cord-339886-th1da1bb 279 32 transmission transmission NN cord-339886-th1da1bb 279 33 of of IN cord-339886-th1da1bb 279 34 Zika Zika NNP cord-339886-th1da1bb 279 35 virus virus NN cord-339886-th1da1bb 279 36 in in IN cord-339886-th1da1bb 279 37 Brazil Brazil NNP cord-339886-th1da1bb 279 38 and and CC cord-339886-th1da1bb 279 39 the the DT cord-339886-th1da1bb 279 40 Americas Americas NNPS cord-339886-th1da1bb 279 41 Genomic Genomic NNP cord-339886-th1da1bb 279 42 epidemiology epidemiology NN cord-339886-th1da1bb 279 43 reveals reveal VBZ cord-339886-th1da1bb 279 44 multiple multiple JJ cord-339886-th1da1bb 279 45 introductions introduction NNS cord-339886-th1da1bb 279 46 of of IN cord-339886-th1da1bb 279 47 Zika Zika NNP cord-339886-th1da1bb 279 48 virus virus NN cord-339886-th1da1bb 279 49 into into IN cord-339886-th1da1bb 279 50 the the DT cord-339886-th1da1bb 279 51 United United NNP cord-339886-th1da1bb 279 52 States States NNP cord-339886-th1da1bb 280 1 This this DT cord-339886-th1da1bb 280 2 paper paper NN cord-339886-th1da1bb 280 3 is be VBZ cord-339886-th1da1bb 280 4 the the DT cord-339886-th1da1bb 280 5 first first JJ cord-339886-th1da1bb 280 6 to to TO cord-339886-th1da1bb 280 7 use use VB cord-339886-th1da1bb 280 8 a a DT cord-339886-th1da1bb 280 9 genomic genomic JJ cord-339886-th1da1bb 280 10 approach approach NN cord-339886-th1da1bb 280 11 to to TO cord-339886-th1da1bb 280 12 track track VB cord-339886-th1da1bb 280 13 the the DT cord-339886-th1da1bb 280 14 entry entry NN cord-339886-th1da1bb 280 15 of of IN cord-339886-th1da1bb 280 16 Zika Zika NNP cord-339886-th1da1bb 280 17 into into IN cord-339886-th1da1bb 280 18 the the DT cord-339886-th1da1bb 280 19 USA USA NNP cord-339886-th1da1bb 281 1 Our -PRON- PRP$ cord-339886-th1da1bb 281 2 shared share VBN cord-339886-th1da1bb 281 3 vulnerability vulnerability NN cord-339886-th1da1bb 281 4 to to IN cord-339886-th1da1bb 281 5 dangerous dangerous JJ cord-339886-th1da1bb 281 6 pathogens pathogen NNS cord-339886-th1da1bb 281 7 Progress Progress NNP cord-339886-th1da1bb 281 8 in in IN cord-339886-th1da1bb 281 9 global global JJ cord-339886-th1da1bb 281 10 surveillance surveillance NN cord-339886-th1da1bb 281 11 and and CC cord-339886-th1da1bb 281 12 response response NN cord-339886-th1da1bb 281 13 capacity capacity NN cord-339886-th1da1bb 281 14 10 10 CD cord-339886-th1da1bb 281 15 years year NNS cord-339886-th1da1bb 281 16 after after IN cord-339886-th1da1bb 281 17 severe severe JJ cord-339886-th1da1bb 281 18 acute acute JJ cord-339886-th1da1bb 281 19 respiratory respiratory JJ cord-339886-th1da1bb 281 20 syndrome syndrome NN cord-339886-th1da1bb 281 21 West west JJ cord-339886-th1da1bb 281 22 African african JJ cord-339886-th1da1bb 281 23 Ebola Ebola NNP cord-339886-th1da1bb 281 24 crisis crisis NN cord-339886-th1da1bb 281 25 and and CC cord-339886-th1da1bb 281 26 orphans orphan NNS cord-339886-th1da1bb 281 27 Commission Commission NNP cord-339886-th1da1bb 281 28 on on IN cord-339886-th1da1bb 281 29 a a DT cord-339886-th1da1bb 281 30 Global Global NNP cord-339886-th1da1bb 281 31 Health Health NNP cord-339886-th1da1bb 281 32 Risk Risk NNP cord-339886-th1da1bb 281 33 Framework Framework NNP cord-339886-th1da1bb 281 34 for for IN cord-339886-th1da1bb 281 35 the the DT cord-339886-th1da1bb 281 36 Future Future NNP cord-339886-th1da1bb 281 37 . . . cord-339886-th1da1bb 282 1 The the DT cord-339886-th1da1bb 282 2 Neglected neglected JJ cord-339886-th1da1bb 282 3 Dimension dimension NN cord-339886-th1da1bb 282 4 of of IN cord-339886-th1da1bb 282 5 Global Global NNP cord-339886-th1da1bb 282 6 Security Security NNP cord-339886-th1da1bb 282 7 : : : cord-339886-th1da1bb 282 8 A a DT cord-339886-th1da1bb 282 9 Framework framework NN cord-339886-th1da1bb 282 10 to to TO cord-339886-th1da1bb 282 11 Counter counter VB cord-339886-th1da1bb 282 12 Infectious Infectious NNP cord-339886-th1da1bb 282 13 Disease Disease NNP cord-339886-th1da1bb 282 14 Crises crisis NNS cord-339886-th1da1bb 283 1 Will Will MD cord-339886-th1da1bb 283 2 Ebola Ebola NNP cord-339886-th1da1bb 283 3 change change VB cord-339886-th1da1bb 283 4 the the DT cord-339886-th1da1bb 283 5 game game NN cord-339886-th1da1bb 283 6 ? ? . cord-339886-th1da1bb 284 1 Ten ten CD cord-339886-th1da1bb 284 2 essential essential JJ cord-339886-th1da1bb 284 3 reforms reform NNS cord-339886-th1da1bb 284 4 before before IN cord-339886-th1da1bb 284 5 the the DT cord-339886-th1da1bb 284 6 next next JJ cord-339886-th1da1bb 284 7 pandemic pandemic NN cord-339886-th1da1bb 284 8 . . . cord-339886-th1da1bb 285 1 The the DT cord-339886-th1da1bb 285 2 report report NN cord-339886-th1da1bb 285 3 of of IN cord-339886-th1da1bb 285 4 the the DT cord-339886-th1da1bb 285 5 Harvard Harvard NNP cord-339886-th1da1bb 285 6 - - HYPH cord-339886-th1da1bb 285 7 LSHTM LSHTM NNP cord-339886-th1da1bb 285 8 Independent Independent NNP cord-339886-th1da1bb 285 9 Panel Panel NNP cord-339886-th1da1bb 285 10 on on IN cord-339886-th1da1bb 285 11 the the DT cord-339886-th1da1bb 285 12 Global Global NNP cord-339886-th1da1bb 285 13 Response Response NNP cord-339886-th1da1bb 285 14 to to IN cord-339886-th1da1bb 285 15 Ebola Ebola NNP cord-339886-th1da1bb 285 16 Application Application NNP cord-339886-th1da1bb 285 17 of of IN cord-339886-th1da1bb 285 18 next next JJ cord-339886-th1da1bb 285 19 generation generation NN cord-339886-th1da1bb 285 20 sequencing sequencing NN cord-339886-th1da1bb 285 21 in in IN cord-339886-th1da1bb 285 22 clinical clinical JJ cord-339886-th1da1bb 285 23 microbiology microbiology NN cord-339886-th1da1bb 285 24 and and CC cord-339886-th1da1bb 285 25 infection infection NN cord-339886-th1da1bb 285 26 prevention prevention NN cord-339886-th1da1bb 286 1 This this DT cord-339886-th1da1bb 286 2 report report NN cord-339886-th1da1bb 286 3 , , , cord-339886-th1da1bb 286 4 from from IN cord-339886-th1da1bb 286 5 the the DT cord-339886-th1da1bb 286 6 American American NNP cord-339886-th1da1bb 286 7 Society Society NNP cord-339886-th1da1bb 286 8 for for IN cord-339886-th1da1bb 286 9 Microbiology Microbiology NNP cord-339886-th1da1bb 286 10 and and CC cord-339886-th1da1bb 286 11 the the DT cord-339886-th1da1bb 286 12 College College NNP cord-339886-th1da1bb 286 13 of of IN cord-339886-th1da1bb 286 14 American American NNP cord-339886-th1da1bb 286 15 Pathologists Pathologists NNPS cord-339886-th1da1bb 286 16 , , , cord-339886-th1da1bb 286 17 provides provide VBZ cord-339886-th1da1bb 286 18 a a DT cord-339886-th1da1bb 286 19 comprehensive comprehensive JJ cord-339886-th1da1bb 286 20 overview overview NN cord-339886-th1da1bb 286 21 of of IN cord-339886-th1da1bb 286 22 clinical clinical JJ cord-339886-th1da1bb 286 23 metagenomics metagenomic NNS cord-339886-th1da1bb 286 24 and and CC cord-339886-th1da1bb 286 25 the the DT cord-339886-th1da1bb 286 26 associated associate VBN cord-339886-th1da1bb 286 27 validation validation NN cord-339886-th1da1bb 286 28 challenges challenge NNS cord-339886-th1da1bb 286 29 Diagnosing diagnose VBG cord-339886-th1da1bb 286 30 Balamuthia Balamuthia NNP cord-339886-th1da1bb 286 31 mandrillaris mandrillaris JJ cord-339886-th1da1bb 286 32 encephalitis encephalitis RB cord-339886-th1da1bb 286 33 with with IN cord-339886-th1da1bb 286 34 metagenomic metagenomic NNP cord-339886-th1da1bb 286 35 deep deep JJ cord-339886-th1da1bb 286 36 sequencing sequence VBG cord-339886-th1da1bb 286 37 Actionable actionable JJ cord-339886-th1da1bb 286 38 diagnosis diagnosis NN cord-339886-th1da1bb 286 39 of of IN cord-339886-th1da1bb 286 40 neuroleptospirosis neuroleptospirosis NN cord-339886-th1da1bb 286 41 by by IN cord-339886-th1da1bb 286 42 next next JJ cord-339886-th1da1bb 286 43 - - HYPH cord-339886-th1da1bb 286 44 generation generation NN cord-339886-th1da1bb 286 45 sequencing sequencing NN cord-339886-th1da1bb 286 46 Multiplex Multiplex NNP cord-339886-th1da1bb 286 47 PCR PCR NNP cord-339886-th1da1bb 286 48 method method NN cord-339886-th1da1bb 286 49 for for IN cord-339886-th1da1bb 286 50 MinION MinION NNP cord-339886-th1da1bb 286 51 and and CC cord-339886-th1da1bb 286 52 Illumina Illumina NNP cord-339886-th1da1bb 286 53 sequencing sequencing NN cord-339886-th1da1bb 286 54 of of IN cord-339886-th1da1bb 286 55 Zika Zika NNP cord-339886-th1da1bb 286 56 and and CC cord-339886-th1da1bb 286 57 other other JJ cord-339886-th1da1bb 286 58 virus virus NN cord-339886-th1da1bb 286 59 genomes genome NNS cord-339886-th1da1bb 286 60 directly directly RB cord-339886-th1da1bb 286 61 from from IN cord-339886-th1da1bb 286 62 clinical clinical JJ cord-339886-th1da1bb 286 63 samples sample NNS cord-339886-th1da1bb 286 64 Clinical clinical JJ cord-339886-th1da1bb 286 65 and and CC cord-339886-th1da1bb 286 66 biological biological JJ cord-339886-th1da1bb 286 67 insights insight NNS cord-339886-th1da1bb 286 68 from from IN cord-339886-th1da1bb 286 69 viral viral JJ cord-339886-th1da1bb 286 70 genome genome NN cord-339886-th1da1bb 286 71 sequencing sequencing NN cord-339886-th1da1bb 286 72 Next next JJ cord-339886-th1da1bb 286 73 - - HYPH cord-339886-th1da1bb 286 74 generation generation NN cord-339886-th1da1bb 286 75 sequencing sequencing NN cord-339886-th1da1bb 286 76 diagnostics diagnostic NNS cord-339886-th1da1bb 286 77 of of IN cord-339886-th1da1bb 286 78 bacteremia bacteremia NN cord-339886-th1da1bb 286 79 in in IN cord-339886-th1da1bb 286 80 septic septic JJ cord-339886-th1da1bb 286 81 patients patient NNS cord-339886-th1da1bb 286 82 Rapid rapid JJ cord-339886-th1da1bb 286 83 pathogen pathogen NN cord-339886-th1da1bb 286 84 identification identification NN cord-339886-th1da1bb 286 85 in in IN cord-339886-th1da1bb 286 86 bacterial bacterial JJ cord-339886-th1da1bb 286 87 pneumonia pneumonia NN cord-339886-th1da1bb 286 88 using use VBG cord-339886-th1da1bb 286 89 real real JJ cord-339886-th1da1bb 286 90 - - HYPH cord-339886-th1da1bb 286 91 time time NN cord-339886-th1da1bb 286 92 metagenomics metagenomic NNS cord-339886-th1da1bb 286 93 Identification identification NN cord-339886-th1da1bb 286 94 of of IN cord-339886-th1da1bb 286 95 bacterial bacterial JJ cord-339886-th1da1bb 286 96 pathogens pathogen NNS cord-339886-th1da1bb 286 97 and and CC cord-339886-th1da1bb 286 98 antimicrobial antimicrobial JJ cord-339886-th1da1bb 286 99 resistance resistance NN cord-339886-th1da1bb 286 100 directly directly RB cord-339886-th1da1bb 286 101 from from IN cord-339886-th1da1bb 286 102 clinical clinical JJ cord-339886-th1da1bb 286 103 urines urine NNS cord-339886-th1da1bb 286 104 by by IN cord-339886-th1da1bb 286 105 nanopore nanopore NNP cord-339886-th1da1bb 286 106 - - HYPH cord-339886-th1da1bb 286 107 based base VBN cord-339886-th1da1bb 286 108 metagenomic metagenomic NNP cord-339886-th1da1bb 286 109 sequencing sequence VBG cord-339886-th1da1bb 286 110 Illuminating Illuminating NNP cord-339886-th1da1bb 286 111 uveitis uveitis NN cord-339886-th1da1bb 286 112 : : : cord-339886-th1da1bb 286 113 metagenomic metagenomic NNP cord-339886-th1da1bb 286 114 deep deep JJ cord-339886-th1da1bb 286 115 sequencing sequencing NN cord-339886-th1da1bb 286 116 identifies identify VBZ cord-339886-th1da1bb 286 117 common common JJ cord-339886-th1da1bb 286 118 and and CC cord-339886-th1da1bb 286 119 rare rare JJ cord-339886-th1da1bb 286 120 pathogens pathogen NNS cord-339886-th1da1bb 286 121 Performance performance VBP cord-339886-th1da1bb 286 122 comparison comparison NN cord-339886-th1da1bb 286 123 of of IN cord-339886-th1da1bb 286 124 benchtop benchtop JJ cord-339886-th1da1bb 286 125 high high JJ cord-339886-th1da1bb 286 126 - - HYPH cord-339886-th1da1bb 286 127 throughput throughput NN cord-339886-th1da1bb 286 128 sequencing sequencing NN cord-339886-th1da1bb 286 129 platforms platform NNS cord-339886-th1da1bb 287 1 The the DT cord-339886-th1da1bb 287 2 Oxford Oxford NNP cord-339886-th1da1bb 287 3 Nanopore Nanopore NNP cord-339886-th1da1bb 287 4 MinION minion NN cord-339886-th1da1bb 287 5 : : : cord-339886-th1da1bb 287 6 delivery delivery NN cord-339886-th1da1bb 287 7 of of IN cord-339886-th1da1bb 287 8 nanopore nanopore NNP cord-339886-th1da1bb 287 9 sequencing sequence VBG cord-339886-th1da1bb 287 10 to to IN cord-339886-th1da1bb 287 11 the the DT cord-339886-th1da1bb 287 12 genomics genomic NNS cord-339886-th1da1bb 287 13 community community NN cord-339886-th1da1bb 287 14 Real real JJ cord-339886-th1da1bb 287 15 - - HYPH cord-339886-th1da1bb 287 16 time time NN cord-339886-th1da1bb 287 17 , , , cord-339886-th1da1bb 287 18 portable portable JJ cord-339886-th1da1bb 287 19 genome genome NN cord-339886-th1da1bb 287 20 sequencing sequencing NN cord-339886-th1da1bb 287 21 for for IN cord-339886-th1da1bb 287 22 Ebola Ebola NNP cord-339886-th1da1bb 287 23 surveillance surveillance NN cord-339886-th1da1bb 287 24 Nanopore Nanopore NNP cord-339886-th1da1bb 287 25 sequencing sequencing NN cord-339886-th1da1bb 287 26 as as IN cord-339886-th1da1bb 287 27 a a DT cord-339886-th1da1bb 287 28 rapidly rapidly RB cord-339886-th1da1bb 287 29 deployable deployable JJ cord-339886-th1da1bb 287 30 ebola ebola NNP cord-339886-th1da1bb 287 31 outbreak outbreak NN cord-339886-th1da1bb 287 32 tool tool NN cord-339886-th1da1bb 287 33 Mobile Mobile NNP cord-339886-th1da1bb 287 34 real real JJ cord-339886-th1da1bb 287 35 - - HYPH cord-339886-th1da1bb 287 36 time time NN cord-339886-th1da1bb 287 37 surveillance surveillance NN cord-339886-th1da1bb 287 38 of of IN cord-339886-th1da1bb 287 39 Zika Zika NNP cord-339886-th1da1bb 287 40 virus virus NN cord-339886-th1da1bb 287 41 in in IN cord-339886-th1da1bb 287 42 Brazil Brazil NNP cord-339886-th1da1bb 287 43 Extreme Extreme NNP cord-339886-th1da1bb 287 44 metagenomics metagenomic NNS cord-339886-th1da1bb 287 45 using use VBG cord-339886-th1da1bb 287 46 nanopore nanopore NNP cord-339886-th1da1bb 287 47 DNA DNA NNP cord-339886-th1da1bb 287 48 sequencing sequencing NN cord-339886-th1da1bb 287 49 : : : cord-339886-th1da1bb 287 50 a a DT cord-339886-th1da1bb 287 51 field field NN cord-339886-th1da1bb 287 52 report report NN cord-339886-th1da1bb 287 53 from from IN cord-339886-th1da1bb 287 54 Svalbard Svalbard NNP cord-339886-th1da1bb 287 55 Real Real NNP cord-339886-th1da1bb 287 56 - - HYPH cord-339886-th1da1bb 287 57 time time NN cord-339886-th1da1bb 287 58 DNA dna NN cord-339886-th1da1bb 287 59 sequencing sequencing NN cord-339886-th1da1bb 287 60 in in IN cord-339886-th1da1bb 287 61 the the DT cord-339886-th1da1bb 287 62 Antarctic Antarctic NNP cord-339886-th1da1bb 287 63 Dry Dry NNP cord-339886-th1da1bb 287 64 Valleys Valleys NNP cord-339886-th1da1bb 287 65 ising ise VBG cord-339886-th1da1bb 287 66 the the DT cord-339886-th1da1bb 287 67 Oxford Oxford NNP cord-339886-th1da1bb 287 68 Nanopore Nanopore NNP cord-339886-th1da1bb 287 69 sequencer sequencer VB cord-339886-th1da1bb 287 70 Deep deep JJ cord-339886-th1da1bb 287 71 sequencing sequencing NN cord-339886-th1da1bb 287 72 : : : cord-339886-th1da1bb 287 73 intra intra JJ cord-339886-th1da1bb 287 74 - - JJ cord-339886-th1da1bb 287 75 terrestrial terrestrial JJ cord-339886-th1da1bb 287 76 metagenomics metagenomic NNS cord-339886-th1da1bb 287 77 illustrates illustrate VBZ cord-339886-th1da1bb 287 78 the the DT cord-339886-th1da1bb 287 79 potential potential NN cord-339886-th1da1bb 287 80 of of IN cord-339886-th1da1bb 287 81 off off IN cord-339886-th1da1bb 287 82 - - HYPH cord-339886-th1da1bb 287 83 grid grid NN cord-339886-th1da1bb 287 84 Nanopore Nanopore NNP cord-339886-th1da1bb 287 85 DNA DNA NNP cord-339886-th1da1bb 287 86 sequencing sequence VBG cord-339886-th1da1bb 287 87 Nanopore Nanopore NNP cord-339886-th1da1bb 287 88 sequencing sequencing NN cord-339886-th1da1bb 287 89 in in IN cord-339886-th1da1bb 287 90 microgravity microgravity NN cord-339886-th1da1bb 288 1 Nanopore Nanopore NNP cord-339886-th1da1bb 288 2 DNA dna NN cord-339886-th1da1bb 288 3 sequencing sequencing NN cord-339886-th1da1bb 288 4 and and CC cord-339886-th1da1bb 288 5 genome genome NN cord-339886-th1da1bb 288 6 assembly assembly NN cord-339886-th1da1bb 288 7 on on IN cord-339886-th1da1bb 288 8 the the DT cord-339886-th1da1bb 288 9 International International NNP cord-339886-th1da1bb 288 10 Space Space NNP cord-339886-th1da1bb 288 11 Station Station NNP cord-339886-th1da1bb 288 12 Genetic genetic JJ cord-339886-th1da1bb 288 13 identification identification NN cord-339886-th1da1bb 288 14 of of IN cord-339886-th1da1bb 288 15 a a DT cord-339886-th1da1bb 288 16 hantavirus hantavirus NN cord-339886-th1da1bb 288 17 associated associate VBN cord-339886-th1da1bb 288 18 with with IN cord-339886-th1da1bb 288 19 an an DT cord-339886-th1da1bb 288 20 outbreak outbreak NN cord-339886-th1da1bb 288 21 of of IN cord-339886-th1da1bb 288 22 acute acute JJ cord-339886-th1da1bb 288 23 respiratory respiratory JJ cord-339886-th1da1bb 288 24 illness illness NN cord-339886-th1da1bb 289 1 The the DT cord-339886-th1da1bb 289 2 molecular molecular JJ cord-339886-th1da1bb 289 3 epidemiology epidemiology NN cord-339886-th1da1bb 289 4 of of IN cord-339886-th1da1bb 289 5 human human JJ cord-339886-th1da1bb 289 6 immunodeficiency immunodeficiency NN cord-339886-th1da1bb 289 7 virus virus NN cord-339886-th1da1bb 289 8 type type NN cord-339886-th1da1bb 289 9 1 1 CD cord-339886-th1da1bb 289 10 in in IN cord-339886-th1da1bb 289 11 Edinburgh Edinburgh NNP cord-339886-th1da1bb 289 12 Whole Whole NNP cord-339886-th1da1bb 289 13 genome genome NN cord-339886-th1da1bb 289 14 sequencing sequencing NN cord-339886-th1da1bb 289 15 -implications -implication NNS cord-339886-th1da1bb 289 16 for for IN cord-339886-th1da1bb 289 17 infection infection NN cord-339886-th1da1bb 289 18 prevention prevention NN cord-339886-th1da1bb 289 19 and and CC cord-339886-th1da1bb 289 20 outbreak outbreak NN cord-339886-th1da1bb 289 21 investigations investigation NNS cord-339886-th1da1bb 289 22 Real real JJ cord-339886-th1da1bb 289 23 - - HYPH cord-339886-th1da1bb 289 24 time time NN cord-339886-th1da1bb 289 25 whole whole JJ cord-339886-th1da1bb 289 26 - - HYPH cord-339886-th1da1bb 289 27 genome genome NN cord-339886-th1da1bb 289 28 sequencing sequencing NN cord-339886-th1da1bb 289 29 for for IN cord-339886-th1da1bb 289 30 routine routine JJ cord-339886-th1da1bb 289 31 typing typing NN cord-339886-th1da1bb 289 32 , , , cord-339886-th1da1bb 289 33 surveillance surveillance NN cord-339886-th1da1bb 289 34 , , , cord-339886-th1da1bb 289 35 and and CC cord-339886-th1da1bb 289 36 outbreak outbreak NN cord-339886-th1da1bb 289 37 detection detection NN cord-339886-th1da1bb 289 38 of of IN cord-339886-th1da1bb 289 39 verotoxigenic verotoxigenic NNP cord-339886-th1da1bb 289 40 Escherichia Escherichia NNP cord-339886-th1da1bb 289 41 coli coli NNS cord-339886-th1da1bb 290 1 Realtime Realtime NNP cord-339886-th1da1bb 290 2 investigation investigation NN cord-339886-th1da1bb 290 3 of of IN cord-339886-th1da1bb 290 4 a a DT cord-339886-th1da1bb 290 5 Legionella Legionella NNP cord-339886-th1da1bb 290 6 pneumophila pneumophila NN cord-339886-th1da1bb 290 7 outbreak outbreak NN cord-339886-th1da1bb 290 8 using use VBG cord-339886-th1da1bb 290 9 whole whole JJ cord-339886-th1da1bb 290 10 genome genome NN cord-339886-th1da1bb 290 11 sequencing sequence VBG cord-339886-th1da1bb 290 12 A a DT cord-339886-th1da1bb 290 13 multi multi JJ cord-339886-th1da1bb 290 14 - - JJ cord-339886-th1da1bb 290 15 country country JJ cord-339886-th1da1bb 290 16 Salmonella Salmonella NNP cord-339886-th1da1bb 290 17 enteritidis enteritidis NN cord-339886-th1da1bb 290 18 phage phage NN cord-339886-th1da1bb 290 19 type type NN cord-339886-th1da1bb 290 20 14b 14b NNS cord-339886-th1da1bb 290 21 outbreak outbreak NN cord-339886-th1da1bb 290 22 associated associate VBN cord-339886-th1da1bb 290 23 with with IN cord-339886-th1da1bb 290 24 eggs egg NNS cord-339886-th1da1bb 290 25 from from IN cord-339886-th1da1bb 290 26 a a DT cord-339886-th1da1bb 290 27 German german JJ cord-339886-th1da1bb 290 28 producer producer NN cord-339886-th1da1bb 290 29 : : : cord-339886-th1da1bb 290 30 ' ' '' cord-339886-th1da1bb 291 1 near near IN cord-339886-th1da1bb 291 2 real real JJ cord-339886-th1da1bb 291 3 - - HYPH cord-339886-th1da1bb 291 4 time time NN cord-339886-th1da1bb 291 5 ' ' '' cord-339886-th1da1bb 291 6 application application NN cord-339886-th1da1bb 291 7 of of IN cord-339886-th1da1bb 291 8 whole whole JJ cord-339886-th1da1bb 291 9 genome genome NN cord-339886-th1da1bb 291 10 sequencing sequencing NN cord-339886-th1da1bb 291 11 and and CC cord-339886-th1da1bb 291 12 food food NN cord-339886-th1da1bb 291 13 chain chain NN cord-339886-th1da1bb 291 14 investigations investigation NNS cord-339886-th1da1bb 291 15 , , , cord-339886-th1da1bb 291 16 United United NNP cord-339886-th1da1bb 291 17 Kingdom Kingdom NNP cord-339886-th1da1bb 291 18 Rapid Rapid NNP cord-339886-th1da1bb 291 19 draft draft NN cord-339886-th1da1bb 291 20 sequencing sequencing NN cord-339886-th1da1bb 291 21 and and CC cord-339886-th1da1bb 291 22 real real JJ cord-339886-th1da1bb 291 23 - - HYPH cord-339886-th1da1bb 291 24 time time NN cord-339886-th1da1bb 291 25 nanopore nanopore JJ cord-339886-th1da1bb 291 26 sequencing sequencing NN cord-339886-th1da1bb 291 27 in in IN cord-339886-th1da1bb 291 28 a a DT cord-339886-th1da1bb 291 29 hospital hospital NN cord-339886-th1da1bb 291 30 outbreak outbreak NN cord-339886-th1da1bb 291 31 of of IN cord-339886-th1da1bb 291 32 Salmonella Salmonella NNP cord-339886-th1da1bb 291 33 Implementation Implementation NNP cord-339886-th1da1bb 291 34 of of IN cord-339886-th1da1bb 291 35 nationwide nationwide JJ cord-339886-th1da1bb 291 36 real real JJ cord-339886-th1da1bb 291 37 - - HYPH cord-339886-th1da1bb 291 38 time time NN cord-339886-th1da1bb 291 39 whole whole JJ cord-339886-th1da1bb 291 40 - - HYPH cord-339886-th1da1bb 291 41 genome genome NN cord-339886-th1da1bb 291 42 sequencing sequencing NN cord-339886-th1da1bb 291 43 to to TO cord-339886-th1da1bb 291 44 enhance enhance VB cord-339886-th1da1bb 291 45 listeriosis listeriosis NN cord-339886-th1da1bb 291 46 outbreak outbreak NN cord-339886-th1da1bb 291 47 detection detection NN cord-339886-th1da1bb 291 48 and and CC cord-339886-th1da1bb 291 49 investigation investigation NN cord-339886-th1da1bb 291 50 A a DT cord-339886-th1da1bb 291 51 brief brief JJ cord-339886-th1da1bb 291 52 primer primer NN cord-339886-th1da1bb 291 53 on on IN cord-339886-th1da1bb 291 54 genomic genomic JJ cord-339886-th1da1bb 291 55 epidemiology epidemiology NN cord-339886-th1da1bb 291 56 : : : cord-339886-th1da1bb 291 57 lessons lesson NNS cord-339886-th1da1bb 291 58 learned learn VBN cord-339886-th1da1bb 291 59 from from IN cord-339886-th1da1bb 291 60 Mycobacterium Mycobacterium NNP cord-339886-th1da1bb 291 61 tuberculosis tuberculosis NN cord-339886-th1da1bb 291 62 Genomic genomic VBP cord-339886-th1da1bb 291 63 infectious infectious JJ cord-339886-th1da1bb 291 64 disease disease NN cord-339886-th1da1bb 291 65 epidemiology epidemiology NN cord-339886-th1da1bb 291 66 in in IN cord-339886-th1da1bb 291 67 partially partially RB cord-339886-th1da1bb 291 68 sampled sample VBN cord-339886-th1da1bb 291 69 and and CC cord-339886-th1da1bb 291 70 ongoing ongoing JJ cord-339886-th1da1bb 291 71 outbreaks outbreak NNS cord-339886-th1da1bb 292 1 This this DT cord-339886-th1da1bb 292 2 paper paper NN cord-339886-th1da1bb 292 3 introduces introduce VBZ cord-339886-th1da1bb 292 4 the the DT cord-339886-th1da1bb 292 5 concept concept NN cord-339886-th1da1bb 292 6 of of IN cord-339886-th1da1bb 292 7 phylodynamics phylodynamic NNS cord-339886-th1da1bb 292 8 , , , cord-339886-th1da1bb 292 9 which which WDT cord-339886-th1da1bb 292 10 has have VBZ cord-339886-th1da1bb 292 11 since since IN cord-339886-th1da1bb 292 12 become become VBN cord-339886-th1da1bb 292 13 a a DT cord-339886-th1da1bb 292 14 key key JJ cord-339886-th1da1bb 292 15 tool tool NN cord-339886-th1da1bb 292 16 in in IN cord-339886-th1da1bb 292 17 the the DT cord-339886-th1da1bb 292 18 population population NN cord-339886-th1da1bb 292 19 genomics genomic NNS cord-339886-th1da1bb 292 20 and and CC cord-339886-th1da1bb 292 21 epidemiology epidemiology NN cord-339886-th1da1bb 292 22 toolboxes toolbox NNS cord-339886-th1da1bb 292 23 Measurably measurably RB cord-339886-th1da1bb 292 24 evolving evolve VBG cord-339886-th1da1bb 292 25 populations population NNS cord-339886-th1da1bb 292 26 Genome genome NN cord-339886-th1da1bb 292 27 - - HYPH cord-339886-th1da1bb 292 28 scale scale NN cord-339886-th1da1bb 292 29 rates rate NNS cord-339886-th1da1bb 292 30 of of IN cord-339886-th1da1bb 292 31 evolutionary evolutionary JJ cord-339886-th1da1bb 292 32 change change NN cord-339886-th1da1bb 292 33 in in IN cord-339886-th1da1bb 292 34 bacteria bacteria NNS cord-339886-th1da1bb 292 35 Towards towards IN cord-339886-th1da1bb 292 36 a a DT cord-339886-th1da1bb 292 37 new new JJ cord-339886-th1da1bb 292 38 paradigm paradigm NN cord-339886-th1da1bb 292 39 linking link VBG cord-339886-th1da1bb 292 40 virus virus NN cord-339886-th1da1bb 292 41 molecular molecular JJ cord-339886-th1da1bb 292 42 evolution evolution NN cord-339886-th1da1bb 292 43 and and CC cord-339886-th1da1bb 292 44 pathogenesis pathogenesis NN cord-339886-th1da1bb 292 45 : : : cord-339886-th1da1bb 292 46 experimental experimental JJ cord-339886-th1da1bb 292 47 design design NN cord-339886-th1da1bb 292 48 and and CC cord-339886-th1da1bb 292 49 phylodynamic phylodynamic JJ cord-339886-th1da1bb 292 50 inference inference NN cord-339886-th1da1bb 293 1 This this DT cord-339886-th1da1bb 293 2 paper paper NN cord-339886-th1da1bb 293 3 describes describe VBZ cord-339886-th1da1bb 293 4 BEAST BEAST NNP cord-339886-th1da1bb 293 5 , , , cord-339886-th1da1bb 293 6 a a DT cord-339886-th1da1bb 293 7 frequently frequently RB cord-339886-th1da1bb 293 8 used use VBN cord-339886-th1da1bb 293 9 toolkit toolkit NN cord-339886-th1da1bb 293 10 for for IN cord-339886-th1da1bb 293 11 phylogenetics phylogenetic NNS cord-339886-th1da1bb 293 12 and and CC cord-339886-th1da1bb 293 13 phylodynamic phylodynamic JJ cord-339886-th1da1bb 293 14 reconstructions reconstruction NNS cord-339886-th1da1bb 293 15 Inferring infer VBG cord-339886-th1da1bb 293 16 epidemiological epidemiological JJ cord-339886-th1da1bb 293 17 dynamics dynamic NNS cord-339886-th1da1bb 293 18 with with IN cord-339886-th1da1bb 293 19 Bayesian bayesian JJ cord-339886-th1da1bb 293 20 coalescent coalescent NN cord-339886-th1da1bb 293 21 inference inference NN cord-339886-th1da1bb 293 22 : : : cord-339886-th1da1bb 293 23 the the DT cord-339886-th1da1bb 293 24 merits merit NNS cord-339886-th1da1bb 293 25 of of IN cord-339886-th1da1bb 293 26 deterministic deterministic JJ cord-339886-th1da1bb 293 27 and and CC cord-339886-th1da1bb 293 28 stochastic stochastic JJ cord-339886-th1da1bb 293 29 models model NNS cord-339886-th1da1bb 294 1 The the DT cord-339886-th1da1bb 294 2 epidemic epidemic NN cord-339886-th1da1bb 294 3 behavior behavior NN cord-339886-th1da1bb 294 4 of of IN cord-339886-th1da1bb 294 5 the the DT cord-339886-th1da1bb 294 6 hepatitis hepatitis NN cord-339886-th1da1bb 294 7 C C NNP cord-339886-th1da1bb 294 8 virus virus NN cord-339886-th1da1bb 294 9 Emerging emerge VBG cord-339886-th1da1bb 294 10 concepts concept NNS cord-339886-th1da1bb 294 11 of of IN cord-339886-th1da1bb 294 12 data datum NNS cord-339886-th1da1bb 294 13 integration integration NN cord-339886-th1da1bb 294 14 in in IN cord-339886-th1da1bb 294 15 pathogen pathogen NN cord-339886-th1da1bb 294 16 phylodynamics phylodynamic NNS cord-339886-th1da1bb 295 1 The the DT cord-339886-th1da1bb 295 2 evolution evolution NN cord-339886-th1da1bb 295 3 of of IN cord-339886-th1da1bb 295 4 Ebola Ebola NNP cord-339886-th1da1bb 295 5 virus virus NN cord-339886-th1da1bb 295 6 : : : cord-339886-th1da1bb 295 7 insights insight NNS cord-339886-th1da1bb 295 8 from from IN cord-339886-th1da1bb 295 9 the the DT cord-339886-th1da1bb 295 10 2013 2013 CD cord-339886-th1da1bb 295 11 - - SYM cord-339886-th1da1bb 295 12 2016 2016 CD cord-339886-th1da1bb 295 13 epidemic epidemic NN cord-339886-th1da1bb 295 14 Emergence emergence NN cord-339886-th1da1bb 295 15 of of IN cord-339886-th1da1bb 295 16 Zaire Zaire NNP cord-339886-th1da1bb 295 17 Ebola Ebola NNP cord-339886-th1da1bb 295 18 virus virus NN cord-339886-th1da1bb 295 19 disease disease NN cord-339886-th1da1bb 295 20 in in IN cord-339886-th1da1bb 295 21 Guinea Guinea NNP cord-339886-th1da1bb 295 22 Genomic Genomic NNP cord-339886-th1da1bb 295 23 surveillance surveillance NN cord-339886-th1da1bb 295 24 elucidates elucidate VBZ cord-339886-th1da1bb 295 25 Ebola Ebola NNP cord-339886-th1da1bb 295 26 virus virus NN cord-339886-th1da1bb 295 27 origin origin NN cord-339886-th1da1bb 295 28 and and CC cord-339886-th1da1bb 295 29 transmission transmission NN cord-339886-th1da1bb 295 30 during during IN cord-339886-th1da1bb 295 31 the the DT cord-339886-th1da1bb 295 32 2014 2014 CD cord-339886-th1da1bb 295 33 outbreak outbreak NN cord-339886-th1da1bb 295 34 Molecular molecular JJ cord-339886-th1da1bb 295 35 evidence evidence NN cord-339886-th1da1bb 295 36 of of IN cord-339886-th1da1bb 295 37 sexual sexual JJ cord-339886-th1da1bb 295 38 transmission transmission NN cord-339886-th1da1bb 295 39 of of IN cord-339886-th1da1bb 295 40 Ebola Ebola NNP cord-339886-th1da1bb 295 41 virus virus NN cord-339886-th1da1bb 295 42 Reduced reduce VBN cord-339886-th1da1bb 295 43 evolutionary evolutionary JJ cord-339886-th1da1bb 295 44 rate rate NN cord-339886-th1da1bb 295 45 in in IN cord-339886-th1da1bb 295 46 reemerged reemerge VBD cord-339886-th1da1bb 295 47 Ebola Ebola NNP cord-339886-th1da1bb 295 48 virus virus NN cord-339886-th1da1bb 295 49 transmission transmission NN cord-339886-th1da1bb 295 50 chains chain NNS cord-339886-th1da1bb 296 1 The the DT cord-339886-th1da1bb 296 2 wanderings wandering NNS cord-339886-th1da1bb 296 3 of of IN cord-339886-th1da1bb 296 4 the the DT cord-339886-th1da1bb 296 5 communication communication NN cord-339886-th1da1bb 296 6 on on IN cord-339886-th1da1bb 296 7 the the DT cord-339886-th1da1bb 296 8 Ebola Ebola NNP cord-339886-th1da1bb 296 9 virus virus NN cord-339886-th1da1bb 296 10 disease disease NN cord-339886-th1da1bb 296 11 Ecological ecological JJ cord-339886-th1da1bb 296 12 origins origin NNS cord-339886-th1da1bb 296 13 of of IN cord-339886-th1da1bb 296 14 novel novel JJ cord-339886-th1da1bb 296 15 human human JJ cord-339886-th1da1bb 296 16 pathogens pathogen NNS cord-339886-th1da1bb 297 1 This this DT cord-339886-th1da1bb 297 2 landmark landmark NN cord-339886-th1da1bb 297 3 work work NN cord-339886-th1da1bb 297 4 surveys survey VBZ cord-339886-th1da1bb 297 5 the the DT cord-339886-th1da1bb 297 6 emergence emergence NN cord-339886-th1da1bb 297 7 of of IN cord-339886-th1da1bb 297 8 infectious infectious JJ cord-339886-th1da1bb 297 9 diseases disease NNS cord-339886-th1da1bb 297 10 since since IN cord-339886-th1da1bb 297 11 1940 1940 CD cord-339886-th1da1bb 297 12 and and CC cord-339886-th1da1bb 297 13 identifies identify VBZ cord-339886-th1da1bb 297 14 a a DT cord-339886-th1da1bb 297 15 number number NN cord-339886-th1da1bb 297 16 of of IN cord-339886-th1da1bb 297 17 hot hot JJ cord-339886-th1da1bb 297 18 spots spot NNS cord-339886-th1da1bb 297 19 for for IN cord-339886-th1da1bb 297 20 disease disease NN cord-339886-th1da1bb 297 21 emergence emergence NN cord-339886-th1da1bb 297 22 Global global JJ cord-339886-th1da1bb 297 23 biogeography biogeography NN cord-339886-th1da1bb 297 24 of of IN cord-339886-th1da1bb 297 25 human human JJ cord-339886-th1da1bb 297 26 infectious infectious JJ cord-339886-th1da1bb 297 27 diseases disease NNS cord-339886-th1da1bb 297 28 Preventing prevent VBG cord-339886-th1da1bb 297 29 pandemics pandemic NNS cord-339886-th1da1bb 297 30 via via IN cord-339886-th1da1bb 297 31 international international JJ cord-339886-th1da1bb 297 32 development development NN cord-339886-th1da1bb 297 33 : : : cord-339886-th1da1bb 297 34 a a DT cord-339886-th1da1bb 297 35 systems system NNS cord-339886-th1da1bb 297 36 approach approach NN cord-339886-th1da1bb 298 1 The the DT cord-339886-th1da1bb 298 2 structure structure NN cord-339886-th1da1bb 298 3 and and CC cord-339886-th1da1bb 298 4 diversity diversity NN cord-339886-th1da1bb 298 5 of of IN cord-339886-th1da1bb 298 6 human human JJ cord-339886-th1da1bb 298 7 Environmental environmental JJ cord-339886-th1da1bb 298 8 surveillance surveillance NN cord-339886-th1da1bb 298 9 of of IN cord-339886-th1da1bb 298 10 viruses virus NNS cord-339886-th1da1bb 298 11 by by IN cord-339886-th1da1bb 298 12 tangential tangential JJ cord-339886-th1da1bb 298 13 flow flow NN cord-339886-th1da1bb 298 14 filtration filtration NN cord-339886-th1da1bb 298 15 and and CC cord-339886-th1da1bb 298 16 metagenomic metagenomic NN cord-339886-th1da1bb 298 17 reconstruction reconstruction NN cord-339886-th1da1bb 298 18 Search Search NNP cord-339886-th1da1bb 298 19 strategy strategy NN cord-339886-th1da1bb 298 20 has have VBZ cord-339886-th1da1bb 298 21 influenced influence VBN cord-339886-th1da1bb 298 22 the the DT cord-339886-th1da1bb 298 23 discovery discovery NN cord-339886-th1da1bb 298 24 rate rate NN cord-339886-th1da1bb 298 25 of of IN cord-339886-th1da1bb 298 26 human human JJ cord-339886-th1da1bb 298 27 viruses virus NNS cord-339886-th1da1bb 298 28 Detecting detect VBG cord-339886-th1da1bb 298 29 the the DT cord-339886-th1da1bb 298 30 emergence emergence NN cord-339886-th1da1bb 298 31 of of IN cord-339886-th1da1bb 298 32 novel novel NN cord-339886-th1da1bb 298 33 , , , cord-339886-th1da1bb 298 34 zoonotic zoonotic JJ cord-339886-th1da1bb 298 35 viruses virus NNS cord-339886-th1da1bb 298 36 pathogenic pathogenic JJ cord-339886-th1da1bb 298 37 to to IN cord-339886-th1da1bb 298 38 humans human NNS cord-339886-th1da1bb 298 39 Non non JJ cord-339886-th1da1bb 298 40 - - JJ cord-339886-th1da1bb 298 41 random random JJ cord-339886-th1da1bb 298 42 patterns pattern NNS cord-339886-th1da1bb 298 43 in in IN cord-339886-th1da1bb 298 44 viral viral JJ cord-339886-th1da1bb 298 45 diversity diversity NN cord-339886-th1da1bb 298 46 Redefining redefine VBG cord-339886-th1da1bb 298 47 the the DT cord-339886-th1da1bb 298 48 invertebrate invertebrate NNP cord-339886-th1da1bb 298 49 RNA RNA NNP cord-339886-th1da1bb 298 50 virosphere virosphere NNP cord-339886-th1da1bb 298 51 Prediction Prediction NNP cord-339886-th1da1bb 298 52 and and CC cord-339886-th1da1bb 298 53 prevention prevention NN cord-339886-th1da1bb 298 54 of of IN cord-339886-th1da1bb 298 55 the the DT cord-339886-th1da1bb 298 56 next next JJ cord-339886-th1da1bb 298 57 pandemic pandemic NN cord-339886-th1da1bb 298 58 zoonosis zoonosis NNP cord-339886-th1da1bb 298 59 Conference Conference NNP cord-339886-th1da1bb 298 60 summary summary NN cord-339886-th1da1bb 298 61 : : : cord-339886-th1da1bb 298 62 One one CD cord-339886-th1da1bb 298 63 World World NNP cord-339886-th1da1bb 298 64 , , , cord-339886-th1da1bb 298 65 One one CD cord-339886-th1da1bb 298 66 Health Health NNP cord-339886-th1da1bb 298 67 : : : cord-339886-th1da1bb 298 68 building build VBG cord-339886-th1da1bb 298 69 interdisciplinary interdisciplinary JJ cord-339886-th1da1bb 298 70 bridges bridge NNS cord-339886-th1da1bb 298 71 to to IN cord-339886-th1da1bb 298 72 health health NN cord-339886-th1da1bb 298 73 in in IN cord-339886-th1da1bb 298 74 a a DT cord-339886-th1da1bb 298 75 globalized globalized JJ cord-339886-th1da1bb 298 76 world world NN cord-339886-th1da1bb 299 1 One one CD cord-339886-th1da1bb 299 2 Health Health NNP cord-339886-th1da1bb 299 3 proof proof NN cord-339886-th1da1bb 299 4 of of IN cord-339886-th1da1bb 299 5 concept concept NN cord-339886-th1da1bb 299 6 : : : cord-339886-th1da1bb 299 7 bringing bring VBG cord-339886-th1da1bb 299 8 a a DT cord-339886-th1da1bb 299 9 transdisciplinary transdisciplinary JJ cord-339886-th1da1bb 299 10 approach approach NN cord-339886-th1da1bb 299 11 to to IN cord-339886-th1da1bb 299 12 surveillance surveillance NN cord-339886-th1da1bb 299 13 for for IN cord-339886-th1da1bb 299 14 zoonotic zoonotic JJ cord-339886-th1da1bb 299 15 viruses virus NNS cord-339886-th1da1bb 299 16 at at IN cord-339886-th1da1bb 299 17 the the DT cord-339886-th1da1bb 299 18 human human JJ cord-339886-th1da1bb 299 19 - - HYPH cord-339886-th1da1bb 299 20 wild wild JJ cord-339886-th1da1bb 299 21 animal animal NN cord-339886-th1da1bb 299 22 interface interface NN cord-339886-th1da1bb 299 23 Optimization Optimization NNP cord-339886-th1da1bb 299 24 of of IN cord-339886-th1da1bb 299 25 a a DT cord-339886-th1da1bb 299 26 novel novel JJ cord-339886-th1da1bb 299 27 noninvasive noninvasive JJ cord-339886-th1da1bb 299 28 oral oral JJ cord-339886-th1da1bb 299 29 sampling sampling NN cord-339886-th1da1bb 299 30 technique technique NN cord-339886-th1da1bb 299 31 for for IN cord-339886-th1da1bb 299 32 zoonotic zoonotic JJ cord-339886-th1da1bb 299 33 pathogen pathogen NN cord-339886-th1da1bb 299 34 surveillance surveillance NN cord-339886-th1da1bb 299 35 in in IN cord-339886-th1da1bb 299 36 nonhuman nonhuman NN cord-339886-th1da1bb 299 37 primates primate NNS cord-339886-th1da1bb 300 1 A a DT cord-339886-th1da1bb 300 2 strategy strategy NN cord-339886-th1da1bb 300 3 to to TO cord-339886-th1da1bb 300 4 estimate estimate VB cord-339886-th1da1bb 300 5 unknown unknown JJ cord-339886-th1da1bb 300 6 viral viral JJ cord-339886-th1da1bb 300 7 diversity diversity NN cord-339886-th1da1bb 300 8 in in IN cord-339886-th1da1bb 300 9 mammals mammal NNS cord-339886-th1da1bb 300 10 Processes process NNS cord-339886-th1da1bb 301 1 underlying underlie VBG cord-339886-th1da1bb 301 2 rabies rabies NN cord-339886-th1da1bb 301 3 virus virus NN cord-339886-th1da1bb 301 4 incursions incursion NNS cord-339886-th1da1bb 301 5 across across IN cord-339886-th1da1bb 301 6 US US NNP cord-339886-th1da1bb 301 7 - - HYPH cord-339886-th1da1bb 301 8 Canada Canada NNP cord-339886-th1da1bb 301 9 border border NN cord-339886-th1da1bb 301 10 as as IN cord-339886-th1da1bb 301 11 revealed reveal VBN cord-339886-th1da1bb 301 12 by by IN cord-339886-th1da1bb 301 13 whole whole JJ cord-339886-th1da1bb 301 14 - - HYPH cord-339886-th1da1bb 301 15 genome genome NN cord-339886-th1da1bb 301 16 phylogeography phylogeography NN cord-339886-th1da1bb 302 1 The the DT cord-339886-th1da1bb 302 2 changing change VBG cord-339886-th1da1bb 302 3 face face NN cord-339886-th1da1bb 302 4 of of IN cord-339886-th1da1bb 302 5 rabies rabie NNS cord-339886-th1da1bb 302 6 in in IN cord-339886-th1da1bb 302 7 Canada Canada NNP cord-339886-th1da1bb 302 8 Genomics Genomics NNP cord-339886-th1da1bb 302 9 reveals reveal VBZ cord-339886-th1da1bb 302 10 historic historic JJ cord-339886-th1da1bb 302 11 and and CC cord-339886-th1da1bb 302 12 contemporary contemporary JJ cord-339886-th1da1bb 302 13 transmission transmission NN cord-339886-th1da1bb 302 14 dynamics dynamic NNS cord-339886-th1da1bb 302 15 of of IN cord-339886-th1da1bb 302 16 a a DT cord-339886-th1da1bb 302 17 bacterial bacterial JJ cord-339886-th1da1bb 302 18 disease disease NN cord-339886-th1da1bb 302 19 among among IN cord-339886-th1da1bb 302 20 wildlife wildlife NN cord-339886-th1da1bb 302 21 and and CC cord-339886-th1da1bb 302 22 livestock livestock NN cord-339886-th1da1bb 302 23 Brucellosis brucellosis NN cord-339886-th1da1bb 302 24 in in IN cord-339886-th1da1bb 302 25 livestock livestock NN cord-339886-th1da1bb 302 26 and and CC cord-339886-th1da1bb 302 27 wildlife wildlife NN cord-339886-th1da1bb 302 28 : : : cord-339886-th1da1bb 303 1 zoonotic zoonotic JJ cord-339886-th1da1bb 303 2 diseases disease NNS cord-339886-th1da1bb 303 3 without without IN cord-339886-th1da1bb 303 4 pandemic pandemic NN cord-339886-th1da1bb 303 5 potential potential NN cord-339886-th1da1bb 303 6 in in IN cord-339886-th1da1bb 303 7 need need NN cord-339886-th1da1bb 303 8 of of IN cord-339886-th1da1bb 303 9 innovative innovative JJ cord-339886-th1da1bb 303 10 one one CD cord-339886-th1da1bb 303 11 health health NN cord-339886-th1da1bb 303 12 approaches approach VBZ cord-339886-th1da1bb 303 13 Viral viral JJ cord-339886-th1da1bb 303 14 metagenomics metagenomic NNS cord-339886-th1da1bb 303 15 on on IN cord-339886-th1da1bb 303 16 animals animal NNS cord-339886-th1da1bb 303 17 as as IN cord-339886-th1da1bb 303 18 a a DT cord-339886-th1da1bb 303 19 tool tool NN cord-339886-th1da1bb 303 20 for for IN cord-339886-th1da1bb 303 21 the the DT cord-339886-th1da1bb 303 22 detection detection NN cord-339886-th1da1bb 303 23 of of IN cord-339886-th1da1bb 303 24 zoonoses zoonosis NNS cord-339886-th1da1bb 303 25 prior prior RB cord-339886-th1da1bb 303 26 to to IN cord-339886-th1da1bb 303 27 human human JJ cord-339886-th1da1bb 303 28 infection infection NN cord-339886-th1da1bb 303 29 ? ? . cord-339886-th1da1bb 304 1 Unbiased unbiased JJ cord-339886-th1da1bb 304 2 whole whole JJ cord-339886-th1da1bb 304 3 - - HYPH cord-339886-th1da1bb 304 4 genome genome NN cord-339886-th1da1bb 304 5 deep deep JJ cord-339886-th1da1bb 304 6 sequencing sequencing NN cord-339886-th1da1bb 304 7 of of IN cord-339886-th1da1bb 304 8 human human JJ cord-339886-th1da1bb 304 9 and and CC cord-339886-th1da1bb 304 10 porcine porcine JJ cord-339886-th1da1bb 304 11 stool stool NN cord-339886-th1da1bb 304 12 samples sample NNS cord-339886-th1da1bb 304 13 reveals reveal VBZ cord-339886-th1da1bb 304 14 circulation circulation NN cord-339886-th1da1bb 304 15 of of IN cord-339886-th1da1bb 304 16 multiple multiple JJ cord-339886-th1da1bb 304 17 groups group NNS cord-339886-th1da1bb 304 18 of of IN cord-339886-th1da1bb 304 19 rotaviruses rotaviruses NNP cord-339886-th1da1bb 304 20 and and CC cord-339886-th1da1bb 304 21 a a DT cord-339886-th1da1bb 304 22 putative putative JJ cord-339886-th1da1bb 304 23 zoonotic zoonotic JJ cord-339886-th1da1bb 304 24 infection infection NN cord-339886-th1da1bb 304 25 Traditional traditional JJ cord-339886-th1da1bb 304 26 and and CC cord-339886-th1da1bb 304 27 syndromic syndromic JJ cord-339886-th1da1bb 304 28 surveillance surveillance NN cord-339886-th1da1bb 304 29 of of IN cord-339886-th1da1bb 304 30 infectious infectious JJ cord-339886-th1da1bb 304 31 diseases disease NNS cord-339886-th1da1bb 304 32 and and CC cord-339886-th1da1bb 304 33 pathogens pathogens NNPS cord-339886-th1da1bb 304 34 Committee Committee NNP cord-339886-th1da1bb 304 35 on on IN cord-339886-th1da1bb 304 36 Achieving achieve VBG cord-339886-th1da1bb 304 37 Sustainable Sustainable NNP cord-339886-th1da1bb 304 38 Global Global NNP cord-339886-th1da1bb 304 39 Capacity Capacity NNP cord-339886-th1da1bb 304 40 for for IN cord-339886-th1da1bb 304 41 Surveillance Surveillance NNP cord-339886-th1da1bb 304 42 and and CC cord-339886-th1da1bb 304 43 Response response NN cord-339886-th1da1bb 304 44 to to IN cord-339886-th1da1bb 304 45 Emerging Emerging NNP cord-339886-th1da1bb 304 46 Diseases Diseases NNPS cord-339886-th1da1bb 304 47 of of IN cord-339886-th1da1bb 304 48 Zoonotic Zoonotic NNP cord-339886-th1da1bb 304 49 Origin Origin NNP cord-339886-th1da1bb 304 50 . . . cord-339886-th1da1bb 305 1 Sustaining sustain VBG cord-339886-th1da1bb 305 2 Global Global NNP cord-339886-th1da1bb 305 3 Surveillance Surveillance NNP cord-339886-th1da1bb 305 4 and and CC cord-339886-th1da1bb 305 5 Response response NN cord-339886-th1da1bb 305 6 to to IN cord-339886-th1da1bb 305 7 Emerging Emerging NNP cord-339886-th1da1bb 305 8 Zoonotic Zoonotic NNP cord-339886-th1da1bb 305 9 Diseases Diseases NNPS cord-339886-th1da1bb 305 10 Implementing implementing IN cord-339886-th1da1bb 305 11 syndromic syndromic JJ cord-339886-th1da1bb 305 12 surveillance surveillance NN cord-339886-th1da1bb 305 13 : : : cord-339886-th1da1bb 305 14 a a DT cord-339886-th1da1bb 305 15 practical practical JJ cord-339886-th1da1bb 305 16 guide guide NN cord-339886-th1da1bb 305 17 informed inform VBN cord-339886-th1da1bb 305 18 by by IN cord-339886-th1da1bb 305 19 the the DT cord-339886-th1da1bb 305 20 early early JJ cord-339886-th1da1bb 305 21 experience experience NN cord-339886-th1da1bb 305 22 What what WP cord-339886-th1da1bb 305 23 is be VBZ cord-339886-th1da1bb 305 24 syndromic syndromic JJ cord-339886-th1da1bb 305 25 surveillance surveillance NN cord-339886-th1da1bb 305 26 ? ? . cord-339886-th1da1bb 306 1 MMWR MMWR NNP cord-339886-th1da1bb 306 2 Suppl Suppl NNP cord-339886-th1da1bb 306 3 Flu Flu NNP cord-339886-th1da1bb 307 1 Near near IN cord-339886-th1da1bb 307 2 You -PRON- PRP cord-339886-th1da1bb 307 3 : : : cord-339886-th1da1bb 307 4 crowdsourced crowdsourced JJ cord-339886-th1da1bb 307 5 symptom symptom NN cord-339886-th1da1bb 307 6 reporting report VBG cord-339886-th1da1bb 307 7 spanning span VBG cord-339886-th1da1bb 307 8 2 2 CD cord-339886-th1da1bb 307 9 influenza influenza NN cord-339886-th1da1bb 307 10 seasons season NNS cord-339886-th1da1bb 308 1 The the DT cord-339886-th1da1bb 308 2 reliability reliability NN cord-339886-th1da1bb 308 3 of of IN cord-339886-th1da1bb 308 4 tweets tweet NNS cord-339886-th1da1bb 308 5 as as IN cord-339886-th1da1bb 308 6 a a DT cord-339886-th1da1bb 308 7 supplementary supplementary JJ cord-339886-th1da1bb 308 8 method method NN cord-339886-th1da1bb 308 9 of of IN cord-339886-th1da1bb 308 10 seasonal seasonal JJ cord-339886-th1da1bb 308 11 influenza influenza NN cord-339886-th1da1bb 308 12 surveillance surveillance NN cord-339886-th1da1bb 309 1 Twitter Twitter NNP cord-339886-th1da1bb 309 2 improves improve VBZ cord-339886-th1da1bb 309 3 influenza influenza NN cord-339886-th1da1bb 309 4 forecasting forecasting NN cord-339886-th1da1bb 309 5 Web web NN cord-339886-th1da1bb 309 6 queries query NNS cord-339886-th1da1bb 309 7 as as IN cord-339886-th1da1bb 309 8 a a DT cord-339886-th1da1bb 309 9 source source NN cord-339886-th1da1bb 309 10 for for IN cord-339886-th1da1bb 309 11 syndromic syndromic JJ cord-339886-th1da1bb 309 12 surveillance surveillance NN cord-339886-th1da1bb 309 13 Google Google NNP cord-339886-th1da1bb 309 14 trends trend NNS cord-339886-th1da1bb 309 15 : : : cord-339886-th1da1bb 309 16 a a DT cord-339886-th1da1bb 309 17 web web NN cord-339886-th1da1bb 309 18 - - HYPH cord-339886-th1da1bb 309 19 based base VBN cord-339886-th1da1bb 309 20 tool tool NN cord-339886-th1da1bb 309 21 for for IN cord-339886-th1da1bb 309 22 real real JJ cord-339886-th1da1bb 309 23 - - HYPH cord-339886-th1da1bb 309 24 time time NN cord-339886-th1da1bb 309 25 surveillance surveillance NN cord-339886-th1da1bb 309 26 of of IN cord-339886-th1da1bb 309 27 disease disease NN cord-339886-th1da1bb 309 28 outbreaks outbreak NNS cord-339886-th1da1bb 309 29 Assessing assess VBG cord-339886-th1da1bb 309 30 Google Google NNP cord-339886-th1da1bb 309 31 flu flu NN cord-339886-th1da1bb 309 32 trends trend NNS cord-339886-th1da1bb 309 33 performance performance NN cord-339886-th1da1bb 309 34 in in IN cord-339886-th1da1bb 309 35 the the DT cord-339886-th1da1bb 309 36 United United NNP cord-339886-th1da1bb 309 37 States States NNP cord-339886-th1da1bb 309 38 during during IN cord-339886-th1da1bb 309 39 the the DT cord-339886-th1da1bb 309 40 2009 2009 CD cord-339886-th1da1bb 309 41 influenza influenza NN cord-339886-th1da1bb 309 42 virus virus NN cord-339886-th1da1bb 309 43 A A NNP cord-339886-th1da1bb 309 44 ( ( -LRB- cord-339886-th1da1bb 309 45 H1N1 H1N1 NNP cord-339886-th1da1bb 309 46 ) ) -RRB- cord-339886-th1da1bb 309 47 pandemic pandemic JJ cord-339886-th1da1bb 309 48 Digital Digital NNP cord-339886-th1da1bb 309 49 disease disease NN cord-339886-th1da1bb 309 50 detection detection NN cord-339886-th1da1bb 309 51 -harnessing -harnesse VBG cord-339886-th1da1bb 309 52 the the DT cord-339886-th1da1bb 309 53 Web web NN cord-339886-th1da1bb 309 54 for for IN cord-339886-th1da1bb 309 55 public public JJ cord-339886-th1da1bb 309 56 health health NN cord-339886-th1da1bb 309 57 surveillance surveillance NN cord-339886-th1da1bb 310 1 An an DT cord-339886-th1da1bb 310 2 overview overview NN cord-339886-th1da1bb 310 3 of of IN cord-339886-th1da1bb 310 4 internet internet NN cord-339886-th1da1bb 310 5 biosurveillance biosurveillance NN cord-339886-th1da1bb 310 6 Digital Digital NNP cord-339886-th1da1bb 310 7 disease disease NN cord-339886-th1da1bb 310 8 detection detection NN cord-339886-th1da1bb 310 9 : : : cord-339886-th1da1bb 310 10 a a DT cord-339886-th1da1bb 310 11 systematic systematic JJ cord-339886-th1da1bb 310 12 review review NN cord-339886-th1da1bb 310 13 of of IN cord-339886-th1da1bb 310 14 event event NN cord-339886-th1da1bb 310 15 - - HYPH cord-339886-th1da1bb 310 16 based base VBN cord-339886-th1da1bb 310 17 internet internet NN cord-339886-th1da1bb 310 18 biosurveillance biosurveillance NN cord-339886-th1da1bb 310 19 systems system NNS cord-339886-th1da1bb 310 20 HealthMap HealthMap NNP cord-339886-th1da1bb 310 21 : : : cord-339886-th1da1bb 310 22 the the DT cord-339886-th1da1bb 310 23 development development NN cord-339886-th1da1bb 310 24 of of IN cord-339886-th1da1bb 310 25 automated automated JJ cord-339886-th1da1bb 310 26 real real JJ cord-339886-th1da1bb 310 27 - - HYPH cord-339886-th1da1bb 310 28 time time NN cord-339886-th1da1bb 310 29 internet internet NN cord-339886-th1da1bb 310 30 surveillance surveillance NN cord-339886-th1da1bb 310 31 for for IN cord-339886-th1da1bb 310 32 epidemic epidemic NN cord-339886-th1da1bb 310 33 intelligence intelligence NN cord-339886-th1da1bb 311 1 HealthMap HealthMap NNP cord-339886-th1da1bb 311 2 has have VBZ cord-339886-th1da1bb 311 3 become become VBN cord-339886-th1da1bb 311 4 one one CD cord-339886-th1da1bb 311 5 of of IN cord-339886-th1da1bb 311 6 the the DT cord-339886-th1da1bb 311 7 most most RBS cord-339886-th1da1bb 311 8 important important JJ cord-339886-th1da1bb 311 9 digital digital JJ cord-339886-th1da1bb 311 10 epidemiology epidemiology NN cord-339886-th1da1bb 311 11 resources resource NNS cord-339886-th1da1bb 311 12 Evaluation Evaluation NNP cord-339886-th1da1bb 311 13 of of IN cord-339886-th1da1bb 311 14 local local JJ cord-339886-th1da1bb 311 15 media medium NNS cord-339886-th1da1bb 311 16 surveillance surveillance NN cord-339886-th1da1bb 311 17 for for IN cord-339886-th1da1bb 311 18 improved improved JJ cord-339886-th1da1bb 311 19 disease disease NN cord-339886-th1da1bb 311 20 recognition recognition NN cord-339886-th1da1bb 311 21 and and CC cord-339886-th1da1bb 311 22 monitoring monitoring NN cord-339886-th1da1bb 311 23 in in IN cord-339886-th1da1bb 311 24 global global JJ cord-339886-th1da1bb 311 25 hotspot hotspot NN cord-339886-th1da1bb 311 26 regions region NNS cord-339886-th1da1bb 311 27 Drivers driver NNS cord-339886-th1da1bb 311 28 of of IN cord-339886-th1da1bb 311 29 emerging emerge VBG cord-339886-th1da1bb 311 30 infectious infectious JJ cord-339886-th1da1bb 311 31 disease disease NN cord-339886-th1da1bb 311 32 events event NNS cord-339886-th1da1bb 311 33 as as IN cord-339886-th1da1bb 311 34 a a DT cord-339886-th1da1bb 311 35 framework framework NN cord-339886-th1da1bb 311 36 for for IN cord-339886-th1da1bb 311 37 digital digital JJ cord-339886-th1da1bb 311 38 detection detection NN cord-339886-th1da1bb 311 39 Precision Precision NNP cord-339886-th1da1bb 311 40 global global JJ cord-339886-th1da1bb 311 41 health health NN cord-339886-th1da1bb 311 42 in in IN cord-339886-th1da1bb 311 43 the the DT cord-339886-th1da1bb 311 44 digital digital JJ cord-339886-th1da1bb 311 45 age age NN cord-339886-th1da1bb 311 46 Spatial spatial JJ cord-339886-th1da1bb 311 47 determinants determinant NNS cord-339886-th1da1bb 311 48 of of IN cord-339886-th1da1bb 311 49 Ebola Ebola NNP cord-339886-th1da1bb 311 50 virus virus NN cord-339886-th1da1bb 311 51 disease disease NN cord-339886-th1da1bb 311 52 risk risk NN cord-339886-th1da1bb 311 53 for for IN cord-339886-th1da1bb 311 54 the the DT cord-339886-th1da1bb 311 55 West west JJ cord-339886-th1da1bb 311 56 African african JJ cord-339886-th1da1bb 311 57 epidemic epidemic NN cord-339886-th1da1bb 311 58 Utilizing utilize VBG cord-339886-th1da1bb 311 59 nontraditional nontraditional JJ cord-339886-th1da1bb 311 60 data datum NNS cord-339886-th1da1bb 311 61 sources source NNS cord-339886-th1da1bb 311 62 for for IN cord-339886-th1da1bb 311 63 near near JJ cord-339886-th1da1bb 311 64 real real JJ cord-339886-th1da1bb 311 65 - - HYPH cord-339886-th1da1bb 311 66 time time NN cord-339886-th1da1bb 311 67 estimation estimation NN cord-339886-th1da1bb 311 68 of of IN cord-339886-th1da1bb 311 69 transmission transmission NN cord-339886-th1da1bb 311 70 dynamics dynamic NNS cord-339886-th1da1bb 311 71 during during IN cord-339886-th1da1bb 311 72 the the DT cord-339886-th1da1bb 311 73 2015 2015 CD cord-339886-th1da1bb 311 74 - - SYM cord-339886-th1da1bb 311 75 2016 2016 CD cord-339886-th1da1bb 311 76 Colombian colombian JJ cord-339886-th1da1bb 311 77 Zika Zika NNP cord-339886-th1da1bb 311 78 virus virus NN cord-339886-th1da1bb 311 79 disease disease NN cord-339886-th1da1bb 311 80 outbreak outbreak NN cord-339886-th1da1bb 311 81 Precision Precision NNP cord-339886-th1da1bb 311 82 public public JJ cord-339886-th1da1bb 311 83 health health NN cord-339886-th1da1bb 311 84 for for IN cord-339886-th1da1bb 311 85 the the DT cord-339886-th1da1bb 311 86 era era NN cord-339886-th1da1bb 311 87 of of IN cord-339886-th1da1bb 311 88 precision precision NN cord-339886-th1da1bb 311 89 medicine medicine NN cord-339886-th1da1bb 312 1 This this DT cord-339886-th1da1bb 312 2 paper paper NN cord-339886-th1da1bb 312 3 describes describe VBZ cord-339886-th1da1bb 312 4 the the DT cord-339886-th1da1bb 312 5 nextflu nextflu NNP cord-339886-th1da1bb 312 6 project project NN cord-339886-th1da1bb 312 7 , , , cord-339886-th1da1bb 312 8 which which WDT cord-339886-th1da1bb 312 9 gave give VBD cord-339886-th1da1bb 312 10 rise rise NN cord-339886-th1da1bb 312 11 to to IN cord-339886-th1da1bb 312 12 the the DT cord-339886-th1da1bb 312 13 Nextstrain Nextstrain NNP cord-339886-th1da1bb 312 14 platform platform NN cord-339886-th1da1bb 312 15 , , , cord-339886-th1da1bb 312 16 whose whose WP$ cord-339886-th1da1bb 312 17 approach approach NN cord-339886-th1da1bb 312 18 to to IN cord-339886-th1da1bb 312 19 analysis analysis NN cord-339886-th1da1bb 312 20 and and CC cord-339886-th1da1bb 312 21 visualization visualization NN cord-339886-th1da1bb 312 22 recently recently RB cord-339886-th1da1bb 312 23 earned earn VBD cord-339886-th1da1bb 312 24 an an DT cord-339886-th1da1bb 312 25 international international JJ cord-339886-th1da1bb 312 26 prize prize NN cord-339886-th1da1bb 312 27 for for IN cord-339886-th1da1bb 312 28 open open JJ cord-339886-th1da1bb 312 29 science science NN cord-339886-th1da1bb 312 30 Known know VBN cord-339886-th1da1bb 312 31 unknowns unknown NNS cord-339886-th1da1bb 312 32 : : : cord-339886-th1da1bb 312 33 building build VBG cord-339886-th1da1bb 312 34 an an DT cord-339886-th1da1bb 312 35 ethics ethic NNS cord-339886-th1da1bb 312 36 of of IN cord-339886-th1da1bb 312 37 uncertainty uncertainty NN cord-339886-th1da1bb 312 38 into into IN cord-339886-th1da1bb 312 39 genomic genomic JJ cord-339886-th1da1bb 312 40 medicine medicine NN cord-339886-th1da1bb 312 41 Delphi Delphi NNP cord-339886-th1da1bb 312 42 technology technology NN cord-339886-th1da1bb 312 43 foresight foresight NN cord-339886-th1da1bb 312 44 study study NN cord-339886-th1da1bb 312 45 : : : cord-339886-th1da1bb 312 46 mapping map VBG cord-339886-th1da1bb 312 47 social social JJ cord-339886-th1da1bb 312 48 construction construction NN cord-339886-th1da1bb 312 49 of of IN cord-339886-th1da1bb 312 50 scientific scientific JJ cord-339886-th1da1bb 312 51 evidence evidence NN cord-339886-th1da1bb 312 52 on on IN cord-339886-th1da1bb 312 53 metagenomics metagenomic NNS cord-339886-th1da1bb 312 54 tests test NNS cord-339886-th1da1bb 312 55 for for IN cord-339886-th1da1bb 312 56 water water NN cord-339886-th1da1bb 312 57 safety safety NN cord-339886-th1da1bb 312 58 Criteria criterion NNS cord-339886-th1da1bb 312 59 for for IN cord-339886-th1da1bb 312 60 validation validation NN cord-339886-th1da1bb 312 61 of of IN cord-339886-th1da1bb 312 62 methods method NNS cord-339886-th1da1bb 312 63 in in IN cord-339886-th1da1bb 312 64 microbial microbial JJ cord-339886-th1da1bb 312 65 forensics forensic NNS cord-339886-th1da1bb 312 66 Expansion expansion NN cord-339886-th1da1bb 312 67 of of IN cord-339886-th1da1bb 312 68 microbial microbial JJ cord-339886-th1da1bb 312 69 forensics forensic NNS cord-339886-th1da1bb 312 70 Validation validation NN cord-339886-th1da1bb 312 71 of of IN cord-339886-th1da1bb 312 72 high high JJ cord-339886-th1da1bb 312 73 throughput throughput NN cord-339886-th1da1bb 312 74 sequencing sequencing NN cord-339886-th1da1bb 312 75 and and CC cord-339886-th1da1bb 312 76 microbial microbial JJ cord-339886-th1da1bb 312 77 forensics forensic NNS cord-339886-th1da1bb 312 78 applications application NNS cord-339886-th1da1bb 313 1 The the DT cord-339886-th1da1bb 313 2 Ebola Ebola NNP cord-339886-th1da1bb 313 3 clinical clinical JJ cord-339886-th1da1bb 313 4 trials trial NNS cord-339886-th1da1bb 313 5 : : : cord-339886-th1da1bb 313 6 a a DT cord-339886-th1da1bb 313 7 precedent precedent NN cord-339886-th1da1bb 313 8 for for IN cord-339886-th1da1bb 313 9 research research NN cord-339886-th1da1bb 313 10 ethics ethic NNS cord-339886-th1da1bb 313 11 in in IN cord-339886-th1da1bb 313 12 disasters disaster NNS cord-339886-th1da1bb 313 13 Germline Germline NNP cord-339886-th1da1bb 313 14 genome genome NN cord-339886-th1da1bb 313 15 - - HYPH cord-339886-th1da1bb 313 16 editing edit VBG cord-339886-th1da1bb 313 17 research research NN cord-339886-th1da1bb 313 18 and and CC cord-339886-th1da1bb 313 19 its -PRON- PRP$ cord-339886-th1da1bb 313 20 socioethical socioethical JJ cord-339886-th1da1bb 313 21 implications implication NNS cord-339886-th1da1bb 314 1 The the DT cord-339886-th1da1bb 314 2 ethical ethical JJ cord-339886-th1da1bb 314 3 introduction introduction NN cord-339886-th1da1bb 314 4 of of IN cord-339886-th1da1bb 314 5 genome genome NN cord-339886-th1da1bb 314 6 - - HYPH cord-339886-th1da1bb 314 7 based base VBN cord-339886-th1da1bb 314 8 information information NN cord-339886-th1da1bb 314 9 and and CC cord-339886-th1da1bb 314 10 technologies technology NNS cord-339886-th1da1bb 314 11 into into IN cord-339886-th1da1bb 314 12 public public JJ cord-339886-th1da1bb 314 13 health health NN cord-339886-th1da1bb 314 14 Genomics genomic NNS cord-339886-th1da1bb 314 15 and and CC cord-339886-th1da1bb 314 16 infectious infectious JJ cord-339886-th1da1bb 314 17 disease disease NN cord-339886-th1da1bb 314 18 : : : cord-339886-th1da1bb 314 19 a a DT cord-339886-th1da1bb 314 20 call call NN cord-339886-th1da1bb 314 21 to to TO cord-339886-th1da1bb 314 22 identify identify VB cord-339886-th1da1bb 314 23 the the DT cord-339886-th1da1bb 314 24 ethical ethical JJ cord-339886-th1da1bb 314 25 , , , cord-339886-th1da1bb 314 26 legal legal JJ cord-339886-th1da1bb 314 27 and and CC cord-339886-th1da1bb 314 28 social social JJ cord-339886-th1da1bb 314 29 implications implication NNS cord-339886-th1da1bb 314 30 for for IN cord-339886-th1da1bb 314 31 public public JJ cord-339886-th1da1bb 314 32 health health NN cord-339886-th1da1bb 314 33 and and CC cord-339886-th1da1bb 314 34 clinical clinical JJ cord-339886-th1da1bb 314 35 practice practice NN cord-339886-th1da1bb 314 36 US US NNP cord-339886-th1da1bb 314 37 ) ) -RRB- cord-339886-th1da1bb 314 38 Committee Committee NNP cord-339886-th1da1bb 314 39 on on IN cord-339886-th1da1bb 314 40 Genomics Genomics NNP cord-339886-th1da1bb 314 41 Databases Databases NNPS cord-339886-th1da1bb 314 42 for for IN cord-339886-th1da1bb 314 43 Bioterrorism Bioterrorism NNP cord-339886-th1da1bb 314 44 Threat Threat NNP cord-339886-th1da1bb 314 45 Agents Agents NNPS cord-339886-th1da1bb 314 46 . . . cord-339886-th1da1bb 315 1 Seeking seek VBG cord-339886-th1da1bb 315 2 Security security NN cord-339886-th1da1bb 315 3 : : : cord-339886-th1da1bb 315 4 Pathogens pathogen NNS cord-339886-th1da1bb 315 5 , , , cord-339886-th1da1bb 315 6 Open Open NNP cord-339886-th1da1bb 315 7 Access Access NNP cord-339886-th1da1bb 315 8 , , , cord-339886-th1da1bb 315 9 and and CC cord-339886-th1da1bb 315 10 Genome Genome NNP cord-339886-th1da1bb 315 11 Databases Databases NNPS cord-339886-th1da1bb 315 12 Perspectives Perspectives NNPS cord-339886-th1da1bb 315 13 on on IN cord-339886-th1da1bb 315 14 data datum NNS cord-339886-th1da1bb 315 15 sharing sharing NN cord-339886-th1da1bb 315 16 in in IN cord-339886-th1da1bb 315 17 disease disease NN cord-339886-th1da1bb 315 18 surveillance surveillance NN cord-339886-th1da1bb 315 19 . . . cord-339886-th1da1bb 316 1 Chatham Chatham NNP cord-339886-th1da1bb 316 2 House House NNP cord-339886-th1da1bb 316 3 : : : cord-339886-th1da1bb 317 1 The the DT cord-339886-th1da1bb 317 2 Royal Royal NNP cord-339886-th1da1bb 317 3 Institute Institute NNP cord-339886-th1da1bb 317 4 of of IN cord-339886-th1da1bb 317 5 International International NNP cord-339886-th1da1bb 317 6 Affairs Affairs NNPS cord-339886-th1da1bb 317 7 Overcoming overcome VBG cord-339886-th1da1bb 317 8 barriers barrier NNS cord-339886-th1da1bb 317 9 to to IN cord-339886-th1da1bb 317 10 data datum NNS cord-339886-th1da1bb 317 11 sharing sharing NN cord-339886-th1da1bb 317 12 in in IN cord-339886-th1da1bb 317 13 public public JJ cord-339886-th1da1bb 317 14 health health NN cord-339886-th1da1bb 317 15 : : : cord-339886-th1da1bb 317 16 a a DT cord-339886-th1da1bb 317 17 global global JJ cord-339886-th1da1bb 317 18 perspective perspective JJ cord-339886-th1da1bb 317 19 Big big JJ cord-339886-th1da1bb 317 20 data datum NNS cord-339886-th1da1bb 317 21 or or CC cord-339886-th1da1bb 317 22 bust bust NN cord-339886-th1da1bb 317 23 : : : cord-339886-th1da1bb 317 24 realizing realize VBG cord-339886-th1da1bb 317 25 the the DT cord-339886-th1da1bb 317 26 microbial microbial JJ cord-339886-th1da1bb 317 27 genomics genomic NNS cord-339886-th1da1bb 317 28 revolution revolution NNP cord-339886-th1da1bb 317 29 Public public JJ cord-339886-th1da1bb 317 30 health health NN cord-339886-th1da1bb 317 31 surveillance surveillance NN cord-339886-th1da1bb 317 32 : : : cord-339886-th1da1bb 317 33 a a DT cord-339886-th1da1bb 317 34 call call NN cord-339886-th1da1bb 317 35 to to TO cord-339886-th1da1bb 317 36 share share VB cord-339886-th1da1bb 317 37 data datum NNS cord-339886-th1da1bb 317 38 . . . cord-339886-th1da1bb 318 1 International International NNP cord-339886-th1da1bb 318 2 Association Association NNP cord-339886-th1da1bb 318 3 of of IN cord-339886-th1da1bb 318 4 Public Public NNP cord-339886-th1da1bb 318 5 Health Health NNP cord-339886-th1da1bb 318 6 Institutes Institutes NNP cord-339886-th1da1bb 318 7 Real Real NNP cord-339886-th1da1bb 318 8 - - HYPH cord-339886-th1da1bb 318 9 time time NN cord-339886-th1da1bb 318 10 sharing sharing NN cord-339886-th1da1bb 318 11 of of IN cord-339886-th1da1bb 318 12 Zika Zika NNP cord-339886-th1da1bb 318 13 virus virus NN cord-339886-th1da1bb 318 14 data datum NNS cord-339886-th1da1bb 318 15 in in IN cord-339886-th1da1bb 318 16 an an DT cord-339886-th1da1bb 318 17 interconnected interconnected JJ cord-339886-th1da1bb 318 18 world world NN cord-339886-th1da1bb 318 19 Democratic democratic JJ cord-339886-th1da1bb 318 20 databases database NNS cord-339886-th1da1bb 318 21 : : : cord-339886-th1da1bb 318 22 science science NN cord-339886-th1da1bb 318 23 on on IN cord-339886-th1da1bb 318 24 GitHub GitHub NNP cord-339886-th1da1bb 318 25 Data Data NNP cord-339886-th1da1bb 318 26 sharing sharing NN cord-339886-th1da1bb 318 27 : : : cord-339886-th1da1bb 318 28 make make VB cord-339886-th1da1bb 318 29 outbreak outbreak NN cord-339886-th1da1bb 318 30 research research NN cord-339886-th1da1bb 318 31 open open JJ cord-339886-th1da1bb 318 32 access access NN cord-339886-th1da1bb 318 33 Make make VB cord-339886-th1da1bb 318 34 data datum NNS cord-339886-th1da1bb 318 35 sharing sharing NN cord-339886-th1da1bb 318 36 routine routine NN cord-339886-th1da1bb 318 37 to to TO cord-339886-th1da1bb 318 38 prepare prepare VB cord-339886-th1da1bb 318 39 for for IN cord-339886-th1da1bb 318 40 public public JJ cord-339886-th1da1bb 318 41 health health NN cord-339886-th1da1bb 318 42 emergencies emergency NNS cord-339886-th1da1bb 319 1 Best good JJS cord-339886-th1da1bb 319 2 practices practice NNS cord-339886-th1da1bb 319 3 for for IN cord-339886-th1da1bb 319 4 ethical ethical JJ cord-339886-th1da1bb 319 5 sharing sharing NN cord-339886-th1da1bb 319 6 of of IN cord-339886-th1da1bb 319 7 individual individual JJ cord-339886-th1da1bb 319 8 - - HYPH cord-339886-th1da1bb 319 9 level level NN cord-339886-th1da1bb 319 10 health health NN cord-339886-th1da1bb 319 11 research research NN cord-339886-th1da1bb 319 12 data datum NNS cord-339886-th1da1bb 319 13 from from IN cord-339886-th1da1bb 319 14 low low JJ cord-339886-th1da1bb 319 15 - - HYPH cord-339886-th1da1bb 319 16 and and CC cord-339886-th1da1bb 319 17 middle middle JJ cord-339886-th1da1bb 319 18 - - HYPH cord-339886-th1da1bb 319 19 income income NN cord-339886-th1da1bb 319 20 settings setting NNS cord-339886-th1da1bb 319 21 Grand grand JJ cord-339886-th1da1bb 319 22 challenges challenge NNS cord-339886-th1da1bb 319 23 in in IN cord-339886-th1da1bb 319 24 global global JJ cord-339886-th1da1bb 319 25 health health NN cord-339886-th1da1bb 319 26 governance governance NN cord-339886-th1da1bb 319 27 Social Social NNP cord-339886-th1da1bb 319 28 and and CC cord-339886-th1da1bb 319 29 economic economic JJ cord-339886-th1da1bb 319 30 aspects aspect NNS cord-339886-th1da1bb 319 31 of of IN cord-339886-th1da1bb 319 32 the the DT cord-339886-th1da1bb 319 33 transmission transmission NN cord-339886-th1da1bb 319 34 of of IN cord-339886-th1da1bb 319 35 pathogenic pathogenic JJ cord-339886-th1da1bb 319 36 bacteria bacteria NNS cord-339886-th1da1bb 319 37 between between IN cord-339886-th1da1bb 319 38 wildlife wildlife NN cord-339886-th1da1bb 319 39 and and CC cord-339886-th1da1bb 319 40 food food NN cord-339886-th1da1bb 319 41 animals animal NNS cord-339886-th1da1bb 319 42 : : : cord-339886-th1da1bb 319 43 a a DT cord-339886-th1da1bb 319 44 thematic thematic JJ cord-339886-th1da1bb 319 45 analysis analysis NN cord-339886-th1da1bb 319 46 of of IN cord-339886-th1da1bb 319 47 published publish VBN cord-339886-th1da1bb 319 48 research research NN cord-339886-th1da1bb 319 49 knowledge knowledge NN cord-339886-th1da1bb 319 50 Epidemiology epidemiology NN cord-339886-th1da1bb 319 51 : : : cord-339886-th1da1bb 319 52 molecular molecular JJ cord-339886-th1da1bb 319 53 mapping mapping NN cord-339886-th1da1bb 319 54 of of IN cord-339886-th1da1bb 319 55 Zika Zika NNP cord-339886-th1da1bb 319 56 spread spread VBD cord-339886-th1da1bb 319 57 Framework Framework NNP cord-339886-th1da1bb 319 58 for for IN cord-339886-th1da1bb 319 59 responsible responsible JJ cord-339886-th1da1bb 319 60 sharing sharing NN cord-339886-th1da1bb 319 61 of of IN cord-339886-th1da1bb 319 62 genomic genomic JJ cord-339886-th1da1bb 319 63 and and CC cord-339886-th1da1bb 319 64 health health NN cord-339886-th1da1bb 319 65 - - HYPH cord-339886-th1da1bb 319 66 related relate VBN cord-339886-th1da1bb 319 67 data datum NNS cord-339886-th1da1bb 319 68 Literature Literature NNP cord-339886-th1da1bb 319 69 review review NN cord-339886-th1da1bb 319 70 of of IN cord-339886-th1da1bb 319 71 Zika Zika NNP cord-339886-th1da1bb 319 72 virus virus NN cord-339886-th1da1bb 319 73 Using use VBG cord-339886-th1da1bb 319 74 genomics genomic NNS cord-339886-th1da1bb 319 75 data datum NNS cord-339886-th1da1bb 319 76 to to TO cord-339886-th1da1bb 319 77 reconstruct reconstruct VB cord-339886-th1da1bb 319 78 transmission transmission NN cord-339886-th1da1bb 319 79 trees tree NNS cord-339886-th1da1bb 319 80 during during IN cord-339886-th1da1bb 319 81 disease disease NN cord-339886-th1da1bb 319 82 outbreaks outbreak NNS cord-339886-th1da1bb 319 83 Smith Smith NNP cord-339886-th1da1bb 319 84 Foundation Foundation NNP cord-339886-th1da1bb 319 85 for for IN cord-339886-th1da1bb 319 86 Health Health NNP cord-339886-th1da1bb 319 87 Research Research NNP cord-339886-th1da1bb 319 88 programmes programme NNS cord-339886-th1da1bb 319 89 . . . cord-339886-th1da1bb 320 1 Both both DT cord-339886-th1da1bb 320 2 authors author NNS cord-339886-th1da1bb 320 3 contributed contribute VBD cord-339886-th1da1bb 320 4 equally equally RB cord-339886-th1da1bb 320 5 to to IN cord-339886-th1da1bb 320 6 all all DT cord-339886-th1da1bb 320 7 aspects aspect NNS cord-339886-th1da1bb 320 8 of of IN cord-339886-th1da1bb 320 9 the the DT cord-339886-th1da1bb 320 10 article article NN cord-339886-th1da1bb 320 11 . . . cord-339886-th1da1bb 321 1 Springer Springer NNP cord-339886-th1da1bb 321 2 Nature Nature NNP cord-339886-th1da1bb 321 3 remains remain VBZ cord-339886-th1da1bb 321 4 neutral neutral JJ cord-339886-th1da1bb 321 5 with with IN cord-339886-th1da1bb 321 6 regard regard NN cord-339886-th1da1bb 321 7 to to IN cord-339886-th1da1bb 321 8 jurisdictional jurisdictional JJ cord-339886-th1da1bb 321 9 claims claim NNS cord-339886-th1da1bb 321 10 in in IN cord-339886-th1da1bb 321 11 published publish VBN cord-339886-th1da1bb 321 12 maps map NNS cord-339886-th1da1bb 321 13 and and CC cord-339886-th1da1bb 321 14 institutional institutional JJ cord-339886-th1da1bb 321 15 affiliations affiliation NNS cord-339886-th1da1bb 321 16 . . .