id sid tid token lemma pos cord-271701-tx0lqgff 1 1 key key NN cord-271701-tx0lqgff 1 2 : : : cord-271701-tx0lqgff 2 1 cord-271701-tx0lqgff cord-271701-tx0lqgff NFP cord-271701-tx0lqgff 2 2 authors author NNS cord-271701-tx0lqgff 2 3 : : : cord-271701-tx0lqgff 2 4 te te NNP cord-271701-tx0lqgff 2 5 Velthuis Velthuis NNP cord-271701-tx0lqgff 2 6 , , , cord-271701-tx0lqgff 2 7 Aartjan Aartjan NNP cord-271701-tx0lqgff 2 8 J.W. J.W. NNP cord-271701-tx0lqgff 2 9 ; ; : cord-271701-tx0lqgff 2 10 van van NNP cord-271701-tx0lqgff 2 11 den den NNP cord-271701-tx0lqgff 2 12 Worm Worm NNP cord-271701-tx0lqgff 2 13 , , , cord-271701-tx0lqgff 2 14 Sjoerd Sjoerd NNP cord-271701-tx0lqgff 2 15 H. H. NNP cord-271701-tx0lqgff 2 16 E. E. NNP cord-271701-tx0lqgff 2 17 ; ; : cord-271701-tx0lqgff 2 18 Snijder Snijder NNP cord-271701-tx0lqgff 2 19 , , , cord-271701-tx0lqgff 2 20 Eric Eric NNP cord-271701-tx0lqgff 2 21 J. J. NNP cord-271701-tx0lqgff 2 22 title title NN cord-271701-tx0lqgff 2 23 : : : cord-271701-tx0lqgff 3 1 The the DT cord-271701-tx0lqgff 3 2 SARS SARS NNP cord-271701-tx0lqgff 3 3 - - HYPH cord-271701-tx0lqgff 3 4 coronavirus coronavirus NN cord-271701-tx0lqgff 3 5 nsp7+nsp8 nsp7+nsp8 NNP cord-271701-tx0lqgff 3 6 complex complex NN cord-271701-tx0lqgff 3 7 is be VBZ cord-271701-tx0lqgff 3 8 a a DT cord-271701-tx0lqgff 3 9 unique unique JJ cord-271701-tx0lqgff 3 10 multimeric multimeric JJ cord-271701-tx0lqgff 3 11 RNA RNA NNP cord-271701-tx0lqgff 3 12 polymerase polymerase NN cord-271701-tx0lqgff 3 13 capable capable JJ cord-271701-tx0lqgff 3 14 of of IN cord-271701-tx0lqgff 3 15 both both DT cord-271701-tx0lqgff 3 16 de de FW cord-271701-tx0lqgff 3 17 novo novo NNP cord-271701-tx0lqgff 3 18 initiation initiation NN cord-271701-tx0lqgff 3 19 and and CC cord-271701-tx0lqgff 3 20 primer primer NN cord-271701-tx0lqgff 3 21 extension extension NN cord-271701-tx0lqgff 3 22 date date NN cord-271701-tx0lqgff 3 23 : : : cord-271701-tx0lqgff 3 24 2011 2011 CD cord-271701-tx0lqgff 3 25 - - SYM cord-271701-tx0lqgff 3 26 10 10 CD cord-271701-tx0lqgff 3 27 - - SYM cord-271701-tx0lqgff 3 28 29 29 CD cord-271701-tx0lqgff 3 29 journal journal NN cord-271701-tx0lqgff 3 30 : : : cord-271701-tx0lqgff 3 31 Nucleic nucleic JJ cord-271701-tx0lqgff 3 32 Acids acid NNS cord-271701-tx0lqgff 3 33 Res res NN cord-271701-tx0lqgff 3 34 DOI doi NN cord-271701-tx0lqgff 3 35 : : : cord-271701-tx0lqgff 3 36 10.1093 10.1093 CD cord-271701-tx0lqgff 3 37 / / SYM cord-271701-tx0lqgff 3 38 nar nar NNP cord-271701-tx0lqgff 3 39 / / SYM cord-271701-tx0lqgff 3 40 gkr893 gkr893 NNP cord-271701-tx0lqgff 3 41 sha sha NNP cord-271701-tx0lqgff 3 42 : : : cord-271701-tx0lqgff 4 1 24df3883c547f5976077bc7a924eec9ae8fa9e71 24df3883c547f5976077bc7a924eec9ae8fa9e71 CD cord-271701-tx0lqgff 4 2 doc_id doc_id CD cord-271701-tx0lqgff 4 3 : : : cord-271701-tx0lqgff 4 4 271701 271701 CD cord-271701-tx0lqgff 4 5 cord_uid cord_uid NNS cord-271701-tx0lqgff 4 6 : : : cord-271701-tx0lqgff 4 7 tx0lqgff tx0lqgff . cord-271701-tx0lqgff 5 1 Uniquely uniquely RB cord-271701-tx0lqgff 5 2 among among IN cord-271701-tx0lqgff 5 3 RNA RNA NNP cord-271701-tx0lqgff 5 4 viruses virus NNS cord-271701-tx0lqgff 5 5 , , , cord-271701-tx0lqgff 5 6 replication replication NN cord-271701-tx0lqgff 5 7 of of IN cord-271701-tx0lqgff 5 8 the the DT cord-271701-tx0lqgff 5 9 ∼30-kb ∼30-kb NNP cord-271701-tx0lqgff 5 10 SARS SARS NNP cord-271701-tx0lqgff 5 11 - - HYPH cord-271701-tx0lqgff 5 12 coronavirus coronavirus NN cord-271701-tx0lqgff 5 13 genome genome NN cord-271701-tx0lqgff 5 14 is be VBZ cord-271701-tx0lqgff 5 15 believed believe VBN cord-271701-tx0lqgff 5 16 to to TO cord-271701-tx0lqgff 5 17 involve involve VB cord-271701-tx0lqgff 5 18 two two CD cord-271701-tx0lqgff 5 19 RNA RNA NNP cord-271701-tx0lqgff 5 20 - - HYPH cord-271701-tx0lqgff 5 21 dependent dependent JJ cord-271701-tx0lqgff 5 22 RNA RNA NNP cord-271701-tx0lqgff 5 23 polymerase polymerase NN cord-271701-tx0lqgff 5 24 ( ( -LRB- cord-271701-tx0lqgff 5 25 RdRp RdRp NNP cord-271701-tx0lqgff 5 26 ) ) -RRB- cord-271701-tx0lqgff 5 27 activities activity NNS cord-271701-tx0lqgff 5 28 . . . cord-271701-tx0lqgff 6 1 The the DT cord-271701-tx0lqgff 6 2 first first JJ cord-271701-tx0lqgff 6 3 is be VBZ cord-271701-tx0lqgff 6 4 primer primer NN cord-271701-tx0lqgff 6 5 - - HYPH cord-271701-tx0lqgff 6 6 dependent dependent JJ cord-271701-tx0lqgff 6 7 and and CC cord-271701-tx0lqgff 6 8 associated associate VBN cord-271701-tx0lqgff 6 9 with with IN cord-271701-tx0lqgff 6 10 the the DT cord-271701-tx0lqgff 6 11 106-kDa 106-kda CD cord-271701-tx0lqgff 6 12 non non JJ cord-271701-tx0lqgff 6 13 - - JJ cord-271701-tx0lqgff 6 14 structural structural JJ cord-271701-tx0lqgff 6 15 protein protein NN cord-271701-tx0lqgff 6 16 12 12 CD cord-271701-tx0lqgff 6 17 ( ( -LRB- cord-271701-tx0lqgff 6 18 nsp12 nsp12 CD cord-271701-tx0lqgff 6 19 ) ) -RRB- cord-271701-tx0lqgff 6 20 , , , cord-271701-tx0lqgff 6 21 whereas whereas IN cord-271701-tx0lqgff 6 22 the the DT cord-271701-tx0lqgff 6 23 second second JJ cord-271701-tx0lqgff 6 24 is be VBZ cord-271701-tx0lqgff 6 25 catalysed catalyse VBN cord-271701-tx0lqgff 6 26 by by IN cord-271701-tx0lqgff 6 27 the the DT cord-271701-tx0lqgff 6 28 22-kDa 22-kda CD cord-271701-tx0lqgff 6 29 nsp8 nsp8 NN cord-271701-tx0lqgff 6 30 . . . cord-271701-tx0lqgff 7 1 This this DT cord-271701-tx0lqgff 7 2 latter latter JJ cord-271701-tx0lqgff 7 3 enzyme enzyme NN cord-271701-tx0lqgff 7 4 is be VBZ cord-271701-tx0lqgff 7 5 capable capable JJ cord-271701-tx0lqgff 7 6 of of IN cord-271701-tx0lqgff 7 7 de de NNP cord-271701-tx0lqgff 7 8 novo novo NNP cord-271701-tx0lqgff 7 9 initiation initiation NN cord-271701-tx0lqgff 7 10 and and CC cord-271701-tx0lqgff 7 11 has have VBZ cord-271701-tx0lqgff 7 12 been be VBN cord-271701-tx0lqgff 7 13 proposed propose VBN cord-271701-tx0lqgff 7 14 to to TO cord-271701-tx0lqgff 7 15 operate operate VB cord-271701-tx0lqgff 7 16 as as IN cord-271701-tx0lqgff 7 17 a a DT cord-271701-tx0lqgff 7 18 primase primase NN cord-271701-tx0lqgff 7 19 . . . cord-271701-tx0lqgff 8 1 Interestingly interestingly RB cord-271701-tx0lqgff 8 2 , , , cord-271701-tx0lqgff 8 3 this this DT cord-271701-tx0lqgff 8 4 protein protein NN cord-271701-tx0lqgff 8 5 has have VBZ cord-271701-tx0lqgff 8 6 only only RB cord-271701-tx0lqgff 8 7 been be VBN cord-271701-tx0lqgff 8 8 crystallized crystallize VBN cord-271701-tx0lqgff 8 9 together together RB cord-271701-tx0lqgff 8 10 with with IN cord-271701-tx0lqgff 8 11 the the DT cord-271701-tx0lqgff 8 12 10-kDa 10-kda CD cord-271701-tx0lqgff 8 13 nsp7 nsp7 NN cord-271701-tx0lqgff 8 14 , , , cord-271701-tx0lqgff 8 15 forming form VBG cord-271701-tx0lqgff 8 16 a a DT cord-271701-tx0lqgff 8 17 hexadecameric hexadecameric NN cord-271701-tx0lqgff 8 18 , , , cord-271701-tx0lqgff 8 19 dsRNA dsrna RB cord-271701-tx0lqgff 8 20 - - HYPH cord-271701-tx0lqgff 8 21 encircling encircle VBG cord-271701-tx0lqgff 8 22 ring ring NN cord-271701-tx0lqgff 8 23 structure structure NN cord-271701-tx0lqgff 8 24 [ [ -LRB- cord-271701-tx0lqgff 8 25 i.e. i.e. FW cord-271701-tx0lqgff 8 26 nsp(7 nsp(7 NN cord-271701-tx0lqgff 8 27 + + SYM cord-271701-tx0lqgff 8 28 8 8 CD cord-271701-tx0lqgff 8 29 ) ) -RRB- cord-271701-tx0lqgff 8 30 , , , cord-271701-tx0lqgff 8 31 consisting consist VBG cord-271701-tx0lqgff 8 32 of of IN cord-271701-tx0lqgff 8 33 8 8 CD cord-271701-tx0lqgff 8 34 copies copy NNS cord-271701-tx0lqgff 8 35 of of IN cord-271701-tx0lqgff 8 36 both both DT cord-271701-tx0lqgff 8 37 nsps nsp NNS cord-271701-tx0lqgff 8 38 ] ] -RRB- cord-271701-tx0lqgff 8 39 . . . cord-271701-tx0lqgff 9 1 To to TO cord-271701-tx0lqgff 9 2 better well RBR cord-271701-tx0lqgff 9 3 understand understand VB cord-271701-tx0lqgff 9 4 the the DT cord-271701-tx0lqgff 9 5 implications implication NNS cord-271701-tx0lqgff 9 6 of of IN cord-271701-tx0lqgff 9 7 these these DT cord-271701-tx0lqgff 9 8 structural structural JJ cord-271701-tx0lqgff 9 9 characteristics characteristic NNS cord-271701-tx0lqgff 9 10 for for IN cord-271701-tx0lqgff 9 11 nsp8-driven nsp8-driven NNP cord-271701-tx0lqgff 9 12 RNA RNA NNP cord-271701-tx0lqgff 9 13 synthesis synthesis NN cord-271701-tx0lqgff 9 14 , , , cord-271701-tx0lqgff 9 15 we -PRON- PRP cord-271701-tx0lqgff 9 16 studied study VBD cord-271701-tx0lqgff 9 17 the the DT cord-271701-tx0lqgff 9 18 prerequisites prerequisite NNS cord-271701-tx0lqgff 9 19 for for IN cord-271701-tx0lqgff 9 20 the the DT cord-271701-tx0lqgff 9 21 formation formation NN cord-271701-tx0lqgff 9 22 of of IN cord-271701-tx0lqgff 9 23 the the DT cord-271701-tx0lqgff 9 24 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 9 25 + + SYM cord-271701-tx0lqgff 9 26 8 8 CD cord-271701-tx0lqgff 9 27 ) ) -RRB- cord-271701-tx0lqgff 9 28 complex complex NN cord-271701-tx0lqgff 9 29 and and CC cord-271701-tx0lqgff 9 30 its -PRON- PRP$ cord-271701-tx0lqgff 9 31 polymerase polymerase NN cord-271701-tx0lqgff 9 32 activity activity NN cord-271701-tx0lqgff 9 33 . . . cord-271701-tx0lqgff 10 1 We -PRON- PRP cord-271701-tx0lqgff 10 2 found find VBD cord-271701-tx0lqgff 10 3 that that IN cord-271701-tx0lqgff 10 4 in in IN cord-271701-tx0lqgff 10 5 particular particular JJ cord-271701-tx0lqgff 10 6 the the DT cord-271701-tx0lqgff 10 7 exposure exposure NN cord-271701-tx0lqgff 10 8 of of IN cord-271701-tx0lqgff 10 9 nsp8 nsp8 NN cord-271701-tx0lqgff 10 10 's 's POS cord-271701-tx0lqgff 10 11 natural natural JJ cord-271701-tx0lqgff 10 12 N n CD cord-271701-tx0lqgff 10 13 - - HYPH cord-271701-tx0lqgff 10 14 terminal terminal NN cord-271701-tx0lqgff 10 15 residue residue NN cord-271701-tx0lqgff 10 16 was be VBD cord-271701-tx0lqgff 10 17 paramount paramount JJ cord-271701-tx0lqgff 10 18 for for IN cord-271701-tx0lqgff 10 19 both both CC cord-271701-tx0lqgff 10 20 the the DT cord-271701-tx0lqgff 10 21 protein protein NN cord-271701-tx0lqgff 10 22 's 's POS cord-271701-tx0lqgff 10 23 ability ability NN cord-271701-tx0lqgff 10 24 to to TO cord-271701-tx0lqgff 10 25 associate associate VB cord-271701-tx0lqgff 10 26 with with IN cord-271701-tx0lqgff 10 27 nsp7 nsp7 NNP cord-271701-tx0lqgff 10 28 and and CC cord-271701-tx0lqgff 10 29 for for IN cord-271701-tx0lqgff 10 30 boosting boost VBG cord-271701-tx0lqgff 10 31 its -PRON- PRP$ cord-271701-tx0lqgff 10 32 RdRp RdRp NNP cord-271701-tx0lqgff 10 33 activity activity NN cord-271701-tx0lqgff 10 34 . . . cord-271701-tx0lqgff 11 1 Moreover moreover RB cord-271701-tx0lqgff 11 2 , , , cord-271701-tx0lqgff 11 3 this this DT cord-271701-tx0lqgff 11 4 ‘ ' `` cord-271701-tx0lqgff 11 5 improved improved JJ cord-271701-tx0lqgff 11 6 ’ ' '' cord-271701-tx0lqgff 11 7 recombinant recombinant JJ cord-271701-tx0lqgff 11 8 nsp8 nsp8 NN cord-271701-tx0lqgff 11 9 was be VBD cord-271701-tx0lqgff 11 10 capable capable JJ cord-271701-tx0lqgff 11 11 of of IN cord-271701-tx0lqgff 11 12 extending extend VBG cord-271701-tx0lqgff 11 13 primed prime VBN cord-271701-tx0lqgff 11 14 RNA RNA NNP cord-271701-tx0lqgff 11 15 templates template NNS cord-271701-tx0lqgff 11 16 , , , cord-271701-tx0lqgff 11 17 a a DT cord-271701-tx0lqgff 11 18 property property NN cord-271701-tx0lqgff 11 19 that that WDT cord-271701-tx0lqgff 11 20 had have VBD cord-271701-tx0lqgff 11 21 gone go VBN cord-271701-tx0lqgff 11 22 unnoticed unnoticed JJ cord-271701-tx0lqgff 11 23 thus thus RB cord-271701-tx0lqgff 11 24 far far RB cord-271701-tx0lqgff 11 25 . . . cord-271701-tx0lqgff 12 1 The the DT cord-271701-tx0lqgff 12 2 latter latter JJ cord-271701-tx0lqgff 12 3 activity activity NN cord-271701-tx0lqgff 12 4 is be VBZ cord-271701-tx0lqgff 12 5 , , , cord-271701-tx0lqgff 12 6 however however RB cord-271701-tx0lqgff 12 7 , , , cord-271701-tx0lqgff 12 8 ∼20-fold ∼20-fold DT cord-271701-tx0lqgff 12 9 weaker weak JJR cord-271701-tx0lqgff 12 10 than than IN cord-271701-tx0lqgff 12 11 that that DT cord-271701-tx0lqgff 12 12 of of IN cord-271701-tx0lqgff 12 13 the the DT cord-271701-tx0lqgff 12 14 primer primer NN cord-271701-tx0lqgff 12 15 - - HYPH cord-271701-tx0lqgff 12 16 dependent dependent JJ cord-271701-tx0lqgff 12 17 nsp12-RdRp nsp12-RdRp NNS cord-271701-tx0lqgff 12 18 at at IN cord-271701-tx0lqgff 12 19 equal equal JJ cord-271701-tx0lqgff 12 20 monomer monomer NN cord-271701-tx0lqgff 12 21 concentrations concentration NNS cord-271701-tx0lqgff 12 22 . . . cord-271701-tx0lqgff 13 1 Finally finally RB cord-271701-tx0lqgff 13 2 , , , cord-271701-tx0lqgff 13 3 site site NN cord-271701-tx0lqgff 13 4 - - HYPH cord-271701-tx0lqgff 13 5 directed direct VBN cord-271701-tx0lqgff 13 6 mutagenesis mutagenesis NN cord-271701-tx0lqgff 13 7 of of IN cord-271701-tx0lqgff 13 8 conserved conserved JJ cord-271701-tx0lqgff 13 9 D D NNP cord-271701-tx0lqgff 13 10 / / SYM cord-271701-tx0lqgff 13 11 ExD exd NN cord-271701-tx0lqgff 13 12 / / SYM cord-271701-tx0lqgff 13 13 E e NN cord-271701-tx0lqgff 13 14 motifs motif NNS cord-271701-tx0lqgff 13 15 was be VBD cord-271701-tx0lqgff 13 16 employed employ VBN cord-271701-tx0lqgff 13 17 to to TO cord-271701-tx0lqgff 13 18 identify identify VB cord-271701-tx0lqgff 13 19 residues residue NNS cord-271701-tx0lqgff 13 20 crucial crucial JJ cord-271701-tx0lqgff 13 21 for for IN cord-271701-tx0lqgff 13 22 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 13 23 + + SYM cord-271701-tx0lqgff 13 24 8 8 CD cord-271701-tx0lqgff 13 25 ) ) -RRB- cord-271701-tx0lqgff 13 26 RdRp rdrp NN cord-271701-tx0lqgff 13 27 activity activity NN cord-271701-tx0lqgff 13 28 . . . cord-271701-tx0lqgff 14 1 In in IN cord-271701-tx0lqgff 14 2 the the DT cord-271701-tx0lqgff 14 3 replicative replicative JJ cord-271701-tx0lqgff 14 4 cycle cycle NN cord-271701-tx0lqgff 14 5 of of IN cord-271701-tx0lqgff 14 6 RNA RNA NNP cord-271701-tx0lqgff 14 7 viruses virus NNS cord-271701-tx0lqgff 14 8 , , , cord-271701-tx0lqgff 14 9 the the DT cord-271701-tx0lqgff 14 10 crucially crucially RB cord-271701-tx0lqgff 14 11 important important JJ cord-271701-tx0lqgff 14 12 process process NN cord-271701-tx0lqgff 14 13 of of IN cord-271701-tx0lqgff 14 14 RNA RNA NNP cord-271701-tx0lqgff 14 15 - - HYPH cord-271701-tx0lqgff 14 16 templated templated JJ cord-271701-tx0lqgff 14 17 RNA RNA NNP cord-271701-tx0lqgff 14 18 synthesis synthesis NN cord-271701-tx0lqgff 14 19 is be VBZ cord-271701-tx0lqgff 14 20 generally generally RB cord-271701-tx0lqgff 14 21 performed perform VBN cord-271701-tx0lqgff 14 22 by by IN cord-271701-tx0lqgff 14 23 an an DT cord-271701-tx0lqgff 14 24 RNA RNA NNP cord-271701-tx0lqgff 14 25 - - HYPH cord-271701-tx0lqgff 14 26 synthesizing synthesize VBG cord-271701-tx0lqgff 14 27 complex complex NN cord-271701-tx0lqgff 14 28 of of IN cord-271701-tx0lqgff 14 29 viral viral JJ cord-271701-tx0lqgff 14 30 enzymes enzyme NNS cord-271701-tx0lqgff 14 31 ( ( -LRB- cord-271701-tx0lqgff 14 32 1 1 CD cord-271701-tx0lqgff 14 33 , , , cord-271701-tx0lqgff 14 34 2 2 CD cord-271701-tx0lqgff 14 35 ) ) -RRB- cord-271701-tx0lqgff 14 36 . . . cord-271701-tx0lqgff 15 1 Commonly commonly RB cord-271701-tx0lqgff 15 2 , , , cord-271701-tx0lqgff 15 3 its -PRON- PRP$ cord-271701-tx0lqgff 15 4 core core NN cord-271701-tx0lqgff 15 5 subunit subunit NN cord-271701-tx0lqgff 15 6 is be VBZ cord-271701-tx0lqgff 15 7 a a DT cord-271701-tx0lqgff 15 8 single single JJ cord-271701-tx0lqgff 15 9 RNA RNA NNP cord-271701-tx0lqgff 15 10 - - HYPH cord-271701-tx0lqgff 15 11 dependent dependent JJ cord-271701-tx0lqgff 15 12 RNA RNA NNP cord-271701-tx0lqgff 15 13 polymerase polymerase NN cord-271701-tx0lqgff 15 14 ( ( -LRB- cord-271701-tx0lqgff 15 15 RdRp RdRp NNP cord-271701-tx0lqgff 15 16 ) ) -RRB- cord-271701-tx0lqgff 15 17 that that WDT cord-271701-tx0lqgff 15 18 drives drive VBZ cord-271701-tx0lqgff 15 19 the the DT cord-271701-tx0lqgff 15 20 production production NN cord-271701-tx0lqgff 15 21 of of IN cord-271701-tx0lqgff 15 22 template template NN cord-271701-tx0lqgff 15 23 strands strand NNS cord-271701-tx0lqgff 15 24 for for IN cord-271701-tx0lqgff 15 25 replication replication NN cord-271701-tx0lqgff 15 26 , , , cord-271701-tx0lqgff 15 27 new new JJ cord-271701-tx0lqgff 15 28 genome genome NN cord-271701-tx0lqgff 15 29 molecules molecule NNS cord-271701-tx0lqgff 15 30 , , , cord-271701-tx0lqgff 15 31 and and CC cord-271701-tx0lqgff 15 32 - - : cord-271701-tx0lqgff 15 33 in in IN cord-271701-tx0lqgff 15 34 many many JJ cord-271701-tx0lqgff 15 35 RNA RNA NNP cord-271701-tx0lqgff 15 36 virus virus NN cord-271701-tx0lqgff 15 37 groupsalso groupsalso NNP cord-271701-tx0lqgff 15 38 subgenomic subgenomic NNP cord-271701-tx0lqgff 15 39 ( ( -LRB- cord-271701-tx0lqgff 15 40 sg sg NNP cord-271701-tx0lqgff 15 41 ) ) -RRB- cord-271701-tx0lqgff 15 42 mRNAs mrnas CD cord-271701-tx0lqgff 15 43 . . . cord-271701-tx0lqgff 16 1 This this DT cord-271701-tx0lqgff 16 2 canonical canonical JJ cord-271701-tx0lqgff 16 3 RdRp rdrp NN cord-271701-tx0lqgff 16 4 is be VBZ cord-271701-tx0lqgff 16 5 structurally structurally RB cord-271701-tx0lqgff 16 6 conserved conserve VBN cord-271701-tx0lqgff 16 7 among among IN cord-271701-tx0lqgff 16 8 RNA RNA NNP cord-271701-tx0lqgff 16 9 viruses virus NNS cord-271701-tx0lqgff 16 10 and and CC cord-271701-tx0lqgff 16 11 widely widely RB cord-271701-tx0lqgff 16 12 accepted accept VBN cord-271701-tx0lqgff 16 13 to to TO cord-271701-tx0lqgff 16 14 drive drive VB cord-271701-tx0lqgff 16 15 catalysis catalysis NN cord-271701-tx0lqgff 16 16 of of IN cord-271701-tx0lqgff 16 17 phosphodiester phosphodiester NN cord-271701-tx0lqgff 16 18 bond bond NN cord-271701-tx0lqgff 16 19 formation formation NN cord-271701-tx0lqgff 16 20 via via IN cord-271701-tx0lqgff 16 21 a a DT cord-271701-tx0lqgff 16 22 well well RB cord-271701-tx0lqgff 16 23 - - HYPH cord-271701-tx0lqgff 16 24 established establish VBN cord-271701-tx0lqgff 16 25 reaction reaction NN cord-271701-tx0lqgff 16 26 mechanism mechanism NN cord-271701-tx0lqgff 16 27 involving involve VBG cord-271701-tx0lqgff 16 28 two two CD cord-271701-tx0lqgff 16 29 metal metal NN cord-271701-tx0lqgff 16 30 ions ion NNS cord-271701-tx0lqgff 16 31 that that WDT cord-271701-tx0lqgff 16 32 are be VBP cord-271701-tx0lqgff 16 33 coordinated coordinate VBN cord-271701-tx0lqgff 16 34 by by IN cord-271701-tx0lqgff 16 35 aspartate aspartate NN cord-271701-tx0lqgff 16 36 residues residue NNS cord-271701-tx0lqgff 16 37 in in IN cord-271701-tx0lqgff 16 38 its -PRON- PRP$ cord-271701-tx0lqgff 16 39 motifs motif NNS cord-271701-tx0lqgff 16 40 A a NN cord-271701-tx0lqgff 16 41 and and CC cord-271701-tx0lqgff 16 42 C C NNP cord-271701-tx0lqgff 16 43 ( ( -LRB- cord-271701-tx0lqgff 16 44 3 3 CD cord-271701-tx0lqgff 16 45 ) ) -RRB- cord-271701-tx0lqgff 16 46 ( ( -LRB- cord-271701-tx0lqgff 16 47 4 4 LS cord-271701-tx0lqgff 16 48 ) ) -RRB- cord-271701-tx0lqgff 16 49 ( ( -LRB- cord-271701-tx0lqgff 16 50 5 5 CD cord-271701-tx0lqgff 16 51 ) ) -RRB- cord-271701-tx0lqgff 16 52 . . . cord-271701-tx0lqgff 17 1 Uniquely uniquely RB cord-271701-tx0lqgff 17 2 among among IN cord-271701-tx0lqgff 17 3 RNA RNA NNP cord-271701-tx0lqgff 17 4 viruses virus NNS cord-271701-tx0lqgff 17 5 , , , cord-271701-tx0lqgff 17 6 however however RB cord-271701-tx0lqgff 17 7 , , , cord-271701-tx0lqgff 17 8 current current JJ cord-271701-tx0lqgff 17 9 evidence evidence NN cord-271701-tx0lqgff 17 10 suggests suggest VBZ cord-271701-tx0lqgff 17 11 that that IN cord-271701-tx0lqgff 17 12 at at RB cord-271701-tx0lqgff 17 13 least least RBS cord-271701-tx0lqgff 17 14 two two CD cord-271701-tx0lqgff 17 15 RdRp RdRp NNP cord-271701-tx0lqgff 17 16 activities activity NNS cord-271701-tx0lqgff 17 17 are be VBP cord-271701-tx0lqgff 17 18 encoded encode VBN cord-271701-tx0lqgff 17 19 by by IN cord-271701-tx0lqgff 17 20 the the DT cord-271701-tx0lqgff 17 21 genomes genome NNS cord-271701-tx0lqgff 17 22 of of IN cord-271701-tx0lqgff 17 23 members member NNS cord-271701-tx0lqgff 17 24 of of IN cord-271701-tx0lqgff 17 25 the the DT cord-271701-tx0lqgff 17 26 coronavirus coronavirus NN cord-271701-tx0lqgff 17 27 ( ( -LRB- cord-271701-tx0lqgff 17 28 CoV CoV NNP cord-271701-tx0lqgff 17 29 ) ) -RRB- cord-271701-tx0lqgff 17 30 family family NN cord-271701-tx0lqgff 17 31 , , , cord-271701-tx0lqgff 17 32 the the DT cord-271701-tx0lqgff 17 33 + + SYM cord-271701-tx0lqgff 17 34 RNA RNA NNP cord-271701-tx0lqgff 17 35 virus virus NN cord-271701-tx0lqgff 17 36 group group NN cord-271701-tx0lqgff 17 37 that that WDT cord-271701-tx0lqgff 17 38 infects infect VBZ cord-271701-tx0lqgff 17 39 a a DT cord-271701-tx0lqgff 17 40 wide wide JJ cord-271701-tx0lqgff 17 41 range range NN cord-271701-tx0lqgff 17 42 of of IN cord-271701-tx0lqgff 17 43 vertebrates vertebrate NNS cord-271701-tx0lqgff 17 44 and and CC cord-271701-tx0lqgff 17 45 is be VBZ cord-271701-tx0lqgff 17 46 renowned renowned JJ cord-271701-tx0lqgff 17 47 for for IN cord-271701-tx0lqgff 17 48 its -PRON- PRP$ cord-271701-tx0lqgff 17 49 exceptionally exceptionally RB cord-271701-tx0lqgff 17 50 large large JJ cord-271701-tx0lqgff 17 51 polycistronic polycistronic JJ cord-271701-tx0lqgff 17 52 genome genome NN cord-271701-tx0lqgff 17 53 of of IN cord-271701-tx0lqgff 17 54 $ $ $ cord-271701-tx0lqgff 17 55 30 30 CD cord-271701-tx0lqgff 17 56 kilobases kilobase NNS cord-271701-tx0lqgff 17 57 ( ( -LRB- cord-271701-tx0lqgff 17 58 6 6 CD cord-271701-tx0lqgff 17 59 ) ) -RRB- cord-271701-tx0lqgff 17 60 . . . cord-271701-tx0lqgff 18 1 Both both DT cord-271701-tx0lqgff 18 2 CoV CoV NNP cord-271701-tx0lqgff 18 3 RdRps RdRps NNP cord-271701-tx0lqgff 18 4 belong belong VBP cord-271701-tx0lqgff 18 5 to to IN cord-271701-tx0lqgff 18 6 the the DT cord-271701-tx0lqgff 18 7 set set NN cord-271701-tx0lqgff 18 8 of of IN cord-271701-tx0lqgff 18 9 16 16 CD cord-271701-tx0lqgff 18 10 non non JJ cord-271701-tx0lqgff 18 11 - - JJ cord-271701-tx0lqgff 18 12 structural structural JJ cord-271701-tx0lqgff 18 13 proteins protein NNS cord-271701-tx0lqgff 18 14 ( ( -LRB- cord-271701-tx0lqgff 18 15 nsps nsps NNP cord-271701-tx0lqgff 18 16 ) ) -RRB- cord-271701-tx0lqgff 18 17 that that WDT cord-271701-tx0lqgff 18 18 are be VBP cord-271701-tx0lqgff 18 19 produced produce VBN cord-271701-tx0lqgff 18 20 through through IN cord-271701-tx0lqgff 18 21 proteolytic proteolytic JJ cord-271701-tx0lqgff 18 22 processing processing NN cord-271701-tx0lqgff 18 23 of of IN cord-271701-tx0lqgff 18 24 the the DT cord-271701-tx0lqgff 18 25 pp1a pp1a NNP cord-271701-tx0lqgff 18 26 and and CC cord-271701-tx0lqgff 18 27 pp1ab pp1ab NNP cord-271701-tx0lqgff 18 28 replicase replicase NN cord-271701-tx0lqgff 18 29 precursor precursor NN cord-271701-tx0lqgff 18 30 polyproteins polyprotein NNS cord-271701-tx0lqgff 18 31 , , , cord-271701-tx0lqgff 18 32 which which WDT cord-271701-tx0lqgff 18 33 both both DT cord-271701-tx0lqgff 18 34 derive derive VBP cord-271701-tx0lqgff 18 35 from from IN cord-271701-tx0lqgff 18 36 translation translation NN cord-271701-tx0lqgff 18 37 of of IN cord-271701-tx0lqgff 18 38 the the DT cord-271701-tx0lqgff 18 39 genomic genomic JJ cord-271701-tx0lqgff 18 40 RNA RNA NNP cord-271701-tx0lqgff 18 41 ( ( -LRB- cord-271701-tx0lqgff 18 42 7 7 CD cord-271701-tx0lqgff 18 43 , , , cord-271701-tx0lqgff 18 44 8) 8) NN cord-271701-tx0lqgff 18 45 . . . cord-271701-tx0lqgff 19 1 For for IN cord-271701-tx0lqgff 19 2 the the DT cord-271701-tx0lqgff 19 3 Severe severe JJ cord-271701-tx0lqgff 19 4 Acute acute JJ cord-271701-tx0lqgff 19 5 Respiratory Respiratory NNP cord-271701-tx0lqgff 19 6 Syndrome syndrome NN cord-271701-tx0lqgff 19 7 - - HYPH cord-271701-tx0lqgff 19 8 associated associate VBN cord-271701-tx0lqgff 19 9 coronavirus coronavirus NN cord-271701-tx0lqgff 19 10 ( ( -LRB- cord-271701-tx0lqgff 19 11 SARS SARS NNP cord-271701-tx0lqgff 19 12 - - HYPH cord-271701-tx0lqgff 19 13 CoV CoV NNP cord-271701-tx0lqgff 19 14 ) ) -RRB- cord-271701-tx0lqgff 19 15 , , , cord-271701-tx0lqgff 19 16 which which WDT cord-271701-tx0lqgff 19 17 emerged emerge VBD cord-271701-tx0lqgff 19 18 in in IN cord-271701-tx0lqgff 19 19 2003 2003 CD cord-271701-tx0lqgff 19 20 and and CC cord-271701-tx0lqgff 19 21 caused cause VBD cord-271701-tx0lqgff 19 22 worldwide worldwide JJ cord-271701-tx0lqgff 19 23 concern concern NN cord-271701-tx0lqgff 19 24 due due IN cord-271701-tx0lqgff 19 25 to to IN cord-271701-tx0lqgff 19 26 the the DT cord-271701-tx0lqgff 19 27 $ $ $ cord-271701-tx0lqgff 19 28 10 10 CD cord-271701-tx0lqgff 19 29 % % NN cord-271701-tx0lqgff 19 30 mortality mortality NN cord-271701-tx0lqgff 19 31 rate rate NN cord-271701-tx0lqgff 19 32 associated associate VBN cord-271701-tx0lqgff 19 33 with with IN cord-271701-tx0lqgff 19 34 infection infection NN cord-271701-tx0lqgff 19 35 of of IN cord-271701-tx0lqgff 19 36 humans human NNS cord-271701-tx0lqgff 19 37 ( ( -LRB- cord-271701-tx0lqgff 19 38 6 6 CD cord-271701-tx0lqgff 19 39 , , , cord-271701-tx0lqgff 19 40 9 9 CD cord-271701-tx0lqgff 19 41 ) ) -RRB- cord-271701-tx0lqgff 19 42 , , , cord-271701-tx0lqgff 19 43 the the DT cord-271701-tx0lqgff 19 44 two two CD cord-271701-tx0lqgff 19 45 replicase replicase NN cord-271701-tx0lqgff 19 46 subunits subunit NNS cord-271701-tx0lqgff 19 47 with with IN cord-271701-tx0lqgff 19 48 RdRp RdRp NNP cord-271701-tx0lqgff 19 49 activity activity NN cord-271701-tx0lqgff 19 50 have have VBP cord-271701-tx0lqgff 19 51 been be VBN cord-271701-tx0lqgff 19 52 studied study VBN cord-271701-tx0lqgff 19 53 in in IN cord-271701-tx0lqgff 19 54 some some DT cord-271701-tx0lqgff 19 55 detail detail NN cord-271701-tx0lqgff 19 56 . . . cord-271701-tx0lqgff 20 1 The the DT cord-271701-tx0lqgff 20 2 first first JJ cord-271701-tx0lqgff 20 3 is be VBZ cord-271701-tx0lqgff 20 4 the the DT cord-271701-tx0lqgff 20 5 106-kDa 106-kda CD cord-271701-tx0lqgff 20 6 nsp12 nsp12 NNS cord-271701-tx0lqgff 20 7 , , , cord-271701-tx0lqgff 20 8 which which WDT cord-271701-tx0lqgff 20 9 contains contain VBZ cord-271701-tx0lqgff 20 10 the the DT cord-271701-tx0lqgff 20 11 canonical canonical JJ cord-271701-tx0lqgff 20 12 viral viral JJ cord-271701-tx0lqgff 20 13 RdRp RdRp NNP cord-271701-tx0lqgff 20 14 motifs motif NNS cord-271701-tx0lqgff 20 15 in in IN cord-271701-tx0lqgff 20 16 its -PRON- PRP$ cord-271701-tx0lqgff 20 17 C c NN cord-271701-tx0lqgff 20 18 - - HYPH cord-271701-tx0lqgff 20 19 terminal terminal NN cord-271701-tx0lqgff 20 20 part part NN cord-271701-tx0lqgff 20 21 and and CC cord-271701-tx0lqgff 20 22 employs employ VBZ cord-271701-tx0lqgff 20 23 a a DT cord-271701-tx0lqgff 20 24 primerdependent primerdependent NN cord-271701-tx0lqgff 20 25 initiation initiation NN cord-271701-tx0lqgff 20 26 mechanism mechanism NN cord-271701-tx0lqgff 20 27 ( ( -LRB- cord-271701-tx0lqgff 20 28 10 10 CD cord-271701-tx0lqgff 20 29 , , , cord-271701-tx0lqgff 20 30 11 11 CD cord-271701-tx0lqgff 20 31 ) ) -RRB- cord-271701-tx0lqgff 20 32 . . . cord-271701-tx0lqgff 21 1 The the DT cord-271701-tx0lqgff 21 2 second second JJ cord-271701-tx0lqgff 21 3 polymerase polymerase NN cord-271701-tx0lqgff 21 4 , , , cord-271701-tx0lqgff 21 5 the the DT cord-271701-tx0lqgff 21 6 22-kDa 22-kda CD cord-271701-tx0lqgff 21 7 nsp8 nsp8 NN cord-271701-tx0lqgff 21 8 , , , cord-271701-tx0lqgff 21 9 is be VBZ cord-271701-tx0lqgff 21 10 unique unique JJ cord-271701-tx0lqgff 21 11 for for IN cord-271701-tx0lqgff 21 12 CoVs CoVs NNP cord-271701-tx0lqgff 21 13 and and CC cord-271701-tx0lqgff 21 14 was be VBD cord-271701-tx0lqgff 21 15 reported report VBN cord-271701-tx0lqgff 21 16 to to TO cord-271701-tx0lqgff 21 17 be be VB cord-271701-tx0lqgff 21 18 only only RB cord-271701-tx0lqgff 21 19 capable capable JJ cord-271701-tx0lqgff 21 20 of of IN cord-271701-tx0lqgff 21 21 de de NNP cord-271701-tx0lqgff 21 22 novo novo NNP cord-271701-tx0lqgff 21 23 RNA RNA NNP cord-271701-tx0lqgff 21 24 synthesis synthesis NN cord-271701-tx0lqgff 21 25 with with IN cord-271701-tx0lqgff 21 26 a a DT cord-271701-tx0lqgff 21 27 low low JJ cord-271701-tx0lqgff 21 28 fidelity fidelity NN cord-271701-tx0lqgff 21 29 on on IN cord-271701-tx0lqgff 21 30 ssRNA ssrna ADD cord-271701-tx0lqgff 21 31 templates template NNS cord-271701-tx0lqgff 21 32 ( ( -LRB- cord-271701-tx0lqgff 21 33 12 12 CD cord-271701-tx0lqgff 21 34 ) ) -RRB- cord-271701-tx0lqgff 21 35 . . . cord-271701-tx0lqgff 22 1 Together together RB cord-271701-tx0lqgff 22 2 , , , cord-271701-tx0lqgff 22 3 these these DT cord-271701-tx0lqgff 22 4 observations observation NNS cord-271701-tx0lqgff 22 5 inspired inspire VBD cord-271701-tx0lqgff 22 6 a a DT cord-271701-tx0lqgff 22 7 hypothesis hypothesis NN cord-271701-tx0lqgff 22 8 in in IN cord-271701-tx0lqgff 22 9 which which WDT cord-271701-tx0lqgff 22 10 nsp8 nsp8 NN cord-271701-tx0lqgff 22 11 would would MD cord-271701-tx0lqgff 22 12 serve serve VB cord-271701-tx0lqgff 22 13 as as IN cord-271701-tx0lqgff 22 14 an an DT cord-271701-tx0lqgff 22 15 RNA RNA NNP cord-271701-tx0lqgff 22 16 primase primase NN cord-271701-tx0lqgff 22 17 , , , cord-271701-tx0lqgff 22 18 i.e. i.e. FW cord-271701-tx0lqgff 22 19 would would MD cord-271701-tx0lqgff 22 20 synthesise synthesise VB cord-271701-tx0lqgff 22 21 short short JJ cord-271701-tx0lqgff 22 22 oligonucleotide oligonucleotide JJ cord-271701-tx0lqgff 22 23 primers primer NNS cord-271701-tx0lqgff 22 24 for for IN cord-271701-tx0lqgff 22 25 subsequent subsequent JJ cord-271701-tx0lqgff 22 26 extension extension NN cord-271701-tx0lqgff 22 27 by by IN cord-271701-tx0lqgff 22 28 the the DT cord-271701-tx0lqgff 22 29 nsp12 nsp12 NNP cord-271701-tx0lqgff 22 30 ' ' POS cord-271701-tx0lqgff 22 31 main main JJ cord-271701-tx0lqgff 22 32 RdRp RdRp NNP cord-271701-tx0lqgff 22 33 ' ' '' cord-271701-tx0lqgff 22 34 ( ( -LRB- cord-271701-tx0lqgff 22 35 12 12 CD cord-271701-tx0lqgff 22 36 ) ) -RRB- cord-271701-tx0lqgff 22 37 . . . cord-271701-tx0lqgff 23 1 In in IN cord-271701-tx0lqgff 23 2 spite spite NN cord-271701-tx0lqgff 23 3 of of IN cord-271701-tx0lqgff 23 4 this this DT cord-271701-tx0lqgff 23 5 attractive attractive JJ cord-271701-tx0lqgff 23 6 model model NN cord-271701-tx0lqgff 23 7 , , , cord-271701-tx0lqgff 23 8 however however RB cord-271701-tx0lqgff 23 9 , , , cord-271701-tx0lqgff 23 10 many many JJ cord-271701-tx0lqgff 23 11 questions question NNS cord-271701-tx0lqgff 23 12 regarding regard VBG cord-271701-tx0lqgff 23 13 CoV CoV NNP cord-271701-tx0lqgff 23 14 RNA RNA NNP cord-271701-tx0lqgff 23 15 synthesis synthesis NN cord-271701-tx0lqgff 23 16 remain remain VBP cord-271701-tx0lqgff 23 17 unanswered unanswered JJ cord-271701-tx0lqgff 23 18 thus thus RB cord-271701-tx0lqgff 23 19 far far RB cord-271701-tx0lqgff 23 20 . . . cord-271701-tx0lqgff 24 1 For for IN cord-271701-tx0lqgff 24 2 instance instance NN cord-271701-tx0lqgff 24 3 , , , cord-271701-tx0lqgff 24 4 it -PRON- PRP cord-271701-tx0lqgff 24 5 is be VBZ cord-271701-tx0lqgff 24 6 unclear unclear JJ cord-271701-tx0lqgff 24 7 whether whether IN cord-271701-tx0lqgff 24 8 the the DT cord-271701-tx0lqgff 24 9 homomeric homomeric NNP cord-271701-tx0lqgff 24 10 form form NN cord-271701-tx0lqgff 24 11 of of IN cord-271701-tx0lqgff 24 12 nsp8 nsp8 NN cord-271701-tx0lqgff 24 13 , , , cord-271701-tx0lqgff 24 14 for for IN cord-271701-tx0lqgff 24 15 which which WDT cord-271701-tx0lqgff 24 16 in in IN cord-271701-tx0lqgff 24 17 vitro vitro FW cord-271701-tx0lqgff 24 18 RdRp RdRp NNP cord-271701-tx0lqgff 24 19 activity activity NN cord-271701-tx0lqgff 24 20 was be VBD cord-271701-tx0lqgff 24 21 previously previously RB cord-271701-tx0lqgff 24 22 documented document VBN cord-271701-tx0lqgff 24 23 ( ( -LRB- cord-271701-tx0lqgff 24 24 12 12 CD cord-271701-tx0lqgff 24 25 ) ) -RRB- cord-271701-tx0lqgff 24 26 , , , cord-271701-tx0lqgff 24 27 actually actually RB cord-271701-tx0lqgff 24 28 occurs occur VBZ cord-271701-tx0lqgff 24 29 in in IN cord-271701-tx0lqgff 24 30 vivo vivo NN cord-271701-tx0lqgff 24 31 , , , cord-271701-tx0lqgff 24 32 as as IN cord-271701-tx0lqgff 24 33 nsp8 nsp8 NN cord-271701-tx0lqgff 24 34 was be VBD cord-271701-tx0lqgff 24 35 also also RB cord-271701-tx0lqgff 24 36 shown show VBN cord-271701-tx0lqgff 24 37 to to TO cord-271701-tx0lqgff 24 38 co co VB cord-271701-tx0lqgff 24 39 - - VB cord-271701-tx0lqgff 24 40 crystallize crystallize VB cord-271701-tx0lqgff 24 41 and and CC cord-271701-tx0lqgff 24 42 form form VB cord-271701-tx0lqgff 24 43 a a DT cord-271701-tx0lqgff 24 44 unique unique JJ cord-271701-tx0lqgff 24 45 hexadecameric hexadecameric JJ cord-271701-tx0lqgff 24 46 ring ring NN cord-271701-tx0lqgff 24 47 - - HYPH cord-271701-tx0lqgff 24 48 structure structure NN cord-271701-tx0lqgff 24 49 with with IN cord-271701-tx0lqgff 24 50 the the DT cord-271701-tx0lqgff 24 51 10-kDa 10-kda CD cord-271701-tx0lqgff 24 52 nsp7 nsp7 NNP cord-271701-tx0lqgff 24 53 subunit subunit NNP cord-271701-tx0lqgff 24 54 that that WDT cord-271701-tx0lqgff 24 55 resides reside VBZ cord-271701-tx0lqgff 24 56 immediately immediately RB cord-271701-tx0lqgff 24 57 upstream upstream RB cord-271701-tx0lqgff 24 58 in in IN cord-271701-tx0lqgff 24 59 the the DT cord-271701-tx0lqgff 24 60 replicase replicase NN cord-271701-tx0lqgff 24 61 polyprotein polyprotein NNP cord-271701-tx0lqgff 24 62 precursors precursor NNS cord-271701-tx0lqgff 24 63 ( ( -LRB- cord-271701-tx0lqgff 24 64 Figure figure NN cord-271701-tx0lqgff 24 65 1 1 CD cord-271701-tx0lqgff 24 66 ) ) -RRB- cord-271701-tx0lqgff 24 67 ( ( -LRB- cord-271701-tx0lqgff 24 68 13 13 CD cord-271701-tx0lqgff 24 69 ) ) -RRB- cord-271701-tx0lqgff 24 70 . . . cord-271701-tx0lqgff 25 1 In in IN cord-271701-tx0lqgff 25 2 a a DT cord-271701-tx0lqgff 25 3 similar similar JJ cord-271701-tx0lqgff 25 4 fashion fashion NN cord-271701-tx0lqgff 25 5 , , , cord-271701-tx0lqgff 25 6 it -PRON- PRP cord-271701-tx0lqgff 25 7 is be VBZ cord-271701-tx0lqgff 25 8 presently presently RB cord-271701-tx0lqgff 25 9 unknown unknown JJ cord-271701-tx0lqgff 25 10 whether whether IN cord-271701-tx0lqgff 25 11 the the DT cord-271701-tx0lqgff 25 12 postulated postulate VBN cord-271701-tx0lqgff 25 13 double double RB cord-271701-tx0lqgff 25 14 - - HYPH cord-271701-tx0lqgff 25 15 stranded strand VBN cord-271701-tx0lqgff 25 16 RNA RNA NNP cord-271701-tx0lqgff 25 17 ( ( -LRB- cord-271701-tx0lqgff 25 18 dsRNA dsrna NN cord-271701-tx0lqgff 25 19 ) ) -RRB- cord-271701-tx0lqgff 25 20 binding bind VBG cord-271701-tx0lqgff 25 21 channel channel NN cord-271701-tx0lqgff 25 22 of of IN cord-271701-tx0lqgff 25 23 this this DT cord-271701-tx0lqgff 25 24 complex complex NN cord-271701-tx0lqgff 25 25 plays play VBZ cord-271701-tx0lqgff 25 26 a a DT cord-271701-tx0lqgff 25 27 role role NN cord-271701-tx0lqgff 25 28 in in IN cord-271701-tx0lqgff 25 29 the the DT cord-271701-tx0lqgff 25 30 RdRp RdRp NNP cord-271701-tx0lqgff 25 31 activity activity NN cord-271701-tx0lqgff 25 32 of of IN cord-271701-tx0lqgff 25 33 nsp8 nsp8 NN cord-271701-tx0lqgff 25 34 and and CC cord-271701-tx0lqgff 25 35 whether whether IN cord-271701-tx0lqgff 25 36 this this DT cord-271701-tx0lqgff 25 37 activity activity NN cord-271701-tx0lqgff 25 38 is be VBZ cord-271701-tx0lqgff 25 39 influenced influence VBN cord-271701-tx0lqgff 25 40 by by IN cord-271701-tx0lqgff 25 41 nsp7 nsp7 NNP cord-271701-tx0lqgff 25 42 , , , cord-271701-tx0lqgff 25 43 particularly particularly RB cord-271701-tx0lqgff 25 44 given give VBN cord-271701-tx0lqgff 25 45 the the DT cord-271701-tx0lqgff 25 46 observed observed JJ cord-271701-tx0lqgff 25 47 low low JJ cord-271701-tx0lqgff 25 48 fidelity fidelity NN cord-271701-tx0lqgff 25 49 and and CC cord-271701-tx0lqgff 25 50 low low JJ cord-271701-tx0lqgff 25 51 processivity processivity NN cord-271701-tx0lqgff 25 52 of of IN cord-271701-tx0lqgff 25 53 nsp8 nsp8 NN cord-271701-tx0lqgff 25 54 ( ( -LRB- cord-271701-tx0lqgff 25 55 12 12 CD cord-271701-tx0lqgff 25 56 ) ) -RRB- cord-271701-tx0lqgff 25 57 . . . cord-271701-tx0lqgff 26 1 To to TO cord-271701-tx0lqgff 26 2 investigate investigate VB cord-271701-tx0lqgff 26 3 the the DT cord-271701-tx0lqgff 26 4 properties property NNS cord-271701-tx0lqgff 26 5 of of IN cord-271701-tx0lqgff 26 6 the the DT cord-271701-tx0lqgff 26 7 nsp7+nsp8 nsp7+nsp8 NNP cord-271701-tx0lqgff 26 8 [ [ -LRB- cord-271701-tx0lqgff 26 9 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 26 10 + + SYM cord-271701-tx0lqgff 26 11 8 8 CD cord-271701-tx0lqgff 26 12 ) ) -RRB- cord-271701-tx0lqgff 26 13 ] ] -RRB- cord-271701-tx0lqgff 27 1 hexadecamer hexadecamer NNP cord-271701-tx0lqgff 27 2 in in IN cord-271701-tx0lqgff 27 3 more more JJR cord-271701-tx0lqgff 27 4 detail detail NN cord-271701-tx0lqgff 27 5 , , , cord-271701-tx0lqgff 27 6 and and CC cord-271701-tx0lqgff 27 7 seek seek VB cord-271701-tx0lqgff 27 8 answers answer NNS cord-271701-tx0lqgff 27 9 to to IN cord-271701-tx0lqgff 27 10 the the DT cord-271701-tx0lqgff 27 11 above above JJ cord-271701-tx0lqgff 27 12 questions question NNS cord-271701-tx0lqgff 27 13 , , , cord-271701-tx0lqgff 27 14 we -PRON- PRP cord-271701-tx0lqgff 27 15 here here RB cord-271701-tx0lqgff 27 16 generated generate VBD cord-271701-tx0lqgff 27 17 and and CC cord-271701-tx0lqgff 27 18 purified purify VBN cord-271701-tx0lqgff 27 19 recombinant recombinant JJ cord-271701-tx0lqgff 27 20 forms form NNS cord-271701-tx0lqgff 27 21 of of IN cord-271701-tx0lqgff 27 22 SARS SARS NNP cord-271701-tx0lqgff 27 23 - - HYPH cord-271701-tx0lqgff 27 24 CoV CoV NNP cord-271701-tx0lqgff 27 25 nsp8 nsp8 NN cord-271701-tx0lqgff 27 26 and and CC cord-271701-tx0lqgff 27 27 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 27 28 + + SYM cord-271701-tx0lqgff 27 29 8 8 CD cord-271701-tx0lqgff 27 30 ) ) -RRB- cord-271701-tx0lqgff 27 31 that that WDT cord-271701-tx0lqgff 27 32 have have VBP cord-271701-tx0lqgff 27 33 natural natural JJ cord-271701-tx0lqgff 27 34 N n CD cord-271701-tx0lqgff 27 35 - - HYPH cord-271701-tx0lqgff 27 36 terminal terminal NN cord-271701-tx0lqgff 27 37 residues residue NNS cord-271701-tx0lqgff 27 38 . . . cord-271701-tx0lqgff 28 1 This this DT cord-271701-tx0lqgff 28 2 technical technical JJ cord-271701-tx0lqgff 28 3 refinement refinement NN cord-271701-tx0lqgff 28 4 was be VBD cord-271701-tx0lqgff 28 5 found find VBN cord-271701-tx0lqgff 28 6 to to TO cord-271701-tx0lqgff 28 7 greatly greatly RB cord-271701-tx0lqgff 28 8 improve improve VB cord-271701-tx0lqgff 28 9 nsp8 nsp8 NN cord-271701-tx0lqgff 28 10 's 's POS cord-271701-tx0lqgff 28 11 ability ability NN cord-271701-tx0lqgff 28 12 to to TO cord-271701-tx0lqgff 28 13 associate associate VB cord-271701-tx0lqgff 28 14 with with IN cord-271701-tx0lqgff 28 15 nsp7 nsp7 NNP cord-271701-tx0lqgff 28 16 . . . cord-271701-tx0lqgff 29 1 Moreover moreover RB cord-271701-tx0lqgff 29 2 , , , cord-271701-tx0lqgff 29 3 and and CC cord-271701-tx0lqgff 29 4 in in IN cord-271701-tx0lqgff 29 5 contrast contrast NN cord-271701-tx0lqgff 29 6 to to IN cord-271701-tx0lqgff 29 7 previous previous JJ cord-271701-tx0lqgff 29 8 observations observation NNS cord-271701-tx0lqgff 29 9 ( ( -LRB- cord-271701-tx0lqgff 29 10 12 12 CD cord-271701-tx0lqgff 29 11 ) ) -RRB- cord-271701-tx0lqgff 29 12 , , , cord-271701-tx0lqgff 29 13 exposure exposure NN cord-271701-tx0lqgff 29 14 of of IN cord-271701-tx0lqgff 29 15 the the DT cord-271701-tx0lqgff 29 16 natural natural JJ cord-271701-tx0lqgff 29 17 N n CD cord-271701-tx0lqgff 29 18 - - HYPH cord-271701-tx0lqgff 29 19 terminus terminus NN cord-271701-tx0lqgff 29 20 proved prove VBD cord-271701-tx0lqgff 29 21 crucial crucial JJ cord-271701-tx0lqgff 29 22 for for IN cord-271701-tx0lqgff 29 23 the the DT cord-271701-tx0lqgff 29 24 enzymatic enzymatic JJ cord-271701-tx0lqgff 29 25 activity activity NN cord-271701-tx0lqgff 29 26 of of IN cord-271701-tx0lqgff 29 27 the the DT cord-271701-tx0lqgff 29 28 complex complex NN cord-271701-tx0lqgff 29 29 on on IN cord-271701-tx0lqgff 29 30 partially partially RB cord-271701-tx0lqgff 29 31 double double RB cord-271701-tx0lqgff 29 32 - - HYPH cord-271701-tx0lqgff 29 33 stranded strand VBN cord-271701-tx0lqgff 29 34 RNA RNA NNP cord-271701-tx0lqgff 29 35 templates template NNS cord-271701-tx0lqgff 29 36 , , , cord-271701-tx0lqgff 29 37 demonstrating demonstrate VBG cord-271701-tx0lqgff 29 38 that that IN cord-271701-tx0lqgff 29 39 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 29 40 + + SYM cord-271701-tx0lqgff 29 41 8 8 CD cord-271701-tx0lqgff 29 42 ) ) -RRB- cord-271701-tx0lqgff 29 43 is be VBZ cord-271701-tx0lqgff 29 44 capable capable JJ cord-271701-tx0lqgff 29 45 of of IN cord-271701-tx0lqgff 29 46 primerdependent primerdependent NN cord-271701-tx0lqgff 29 47 RdRp RdRp NNP cord-271701-tx0lqgff 29 48 activity activity NN cord-271701-tx0lqgff 29 49 as as RB cord-271701-tx0lqgff 29 50 well well RB cord-271701-tx0lqgff 29 51 . . . cord-271701-tx0lqgff 30 1 Site site NN cord-271701-tx0lqgff 30 2 - - HYPH cord-271701-tx0lqgff 30 3 directed direct VBN cord-271701-tx0lqgff 30 4 mutagenesis mutagenesis NN cord-271701-tx0lqgff 30 5 of of IN cord-271701-tx0lqgff 30 6 nsp8 nsp8 NN cord-271701-tx0lqgff 30 7 in in IN cord-271701-tx0lqgff 30 8 the the DT cord-271701-tx0lqgff 30 9 context context NN cord-271701-tx0lqgff 30 10 of of IN cord-271701-tx0lqgff 30 11 the the DT cord-271701-tx0lqgff 30 12 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 30 13 + + SYM cord-271701-tx0lqgff 30 14 8 8 CD cord-271701-tx0lqgff 30 15 ) ) -RRB- cord-271701-tx0lqgff 30 16 complex complex NN cord-271701-tx0lqgff 30 17 identified identify VBD cord-271701-tx0lqgff 30 18 a a DT cord-271701-tx0lqgff 30 19 conserved conserved JJ cord-271701-tx0lqgff 30 20 D D NNP cord-271701-tx0lqgff 30 21 / / SYM cord-271701-tx0lqgff 30 22 ExD exd NN cord-271701-tx0lqgff 30 23 / / SYM cord-271701-tx0lqgff 30 24 E e NN cord-271701-tx0lqgff 30 25 motif motif NN cord-271701-tx0lqgff 30 26 that that WDT cord-271701-tx0lqgff 30 27 is be VBZ cord-271701-tx0lqgff 30 28 important important JJ cord-271701-tx0lqgff 30 29 for for IN cord-271701-tx0lqgff 30 30 catalysis catalysis NN cord-271701-tx0lqgff 30 31 in in IN cord-271701-tx0lqgff 30 32 vitro vitro FW cord-271701-tx0lqgff 30 33 , , , cord-271701-tx0lqgff 30 34 possibly possibly RB cord-271701-tx0lqgff 30 35 providing provide VBG cord-271701-tx0lqgff 30 36 a a DT cord-271701-tx0lqgff 30 37 first first JJ cord-271701-tx0lqgff 30 38 indication indication NN cord-271701-tx0lqgff 30 39 of of IN cord-271701-tx0lqgff 30 40 the the DT cord-271701-tx0lqgff 30 41 location location NN cord-271701-tx0lqgff 30 42 of of IN cord-271701-tx0lqgff 30 43 the the DT cord-271701-tx0lqgff 30 44 presently presently RB cord-271701-tx0lqgff 30 45 unknown unknown JJ cord-271701-tx0lqgff 30 46 nsp8 nsp8 NN cord-271701-tx0lqgff 30 47 active active JJ cord-271701-tx0lqgff 30 48 site site NN cord-271701-tx0lqgff 30 49 . . . cord-271701-tx0lqgff 31 1 Overall overall RB cord-271701-tx0lqgff 31 2 , , , cord-271701-tx0lqgff 31 3 these these DT cord-271701-tx0lqgff 31 4 results result NNS cord-271701-tx0lqgff 31 5 define define VBP cord-271701-tx0lqgff 31 6 the the DT cord-271701-tx0lqgff 31 7 SARS SARS NNP cord-271701-tx0lqgff 31 8 - - HYPH cord-271701-tx0lqgff 31 9 CoV CoV NNP cord-271701-tx0lqgff 31 10 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 31 11 + + SYM cord-271701-tx0lqgff 31 12 8 8 CD cord-271701-tx0lqgff 31 13 ) ) -RRB- cord-271701-tx0lqgff 31 14 complex complex JJ cord-271701-tx0lqgff 31 15 as as IN cord-271701-tx0lqgff 31 16 an an DT cord-271701-tx0lqgff 31 17 intriguing intriguing JJ cord-271701-tx0lqgff 31 18 multimeric multimeric JJ cord-271701-tx0lqgff 31 19 RNA RNA NNP cord-271701-tx0lqgff 31 20 polymerase polymerase NN cord-271701-tx0lqgff 31 21 that that WDT cord-271701-tx0lqgff 31 22 is be VBZ cord-271701-tx0lqgff 31 23 capable capable JJ cord-271701-tx0lqgff 31 24 of of IN cord-271701-tx0lqgff 31 25 primer primer NN cord-271701-tx0lqgff 31 26 extension extension NN cord-271701-tx0lqgff 31 27 . . . cord-271701-tx0lqgff 32 1 For for IN cord-271701-tx0lqgff 32 2 SARS SARS NNP cord-271701-tx0lqgff 32 3 - - HYPH cord-271701-tx0lqgff 32 4 CoV CoV NNP cord-271701-tx0lqgff 32 5 nsp7-nsp8 nsp7-nsp8 CD cord-271701-tx0lqgff 32 6 expression expression NN cord-271701-tx0lqgff 32 7 , , , cord-271701-tx0lqgff 32 8 the the DT cord-271701-tx0lqgff 32 9 sequence sequence NN cord-271701-tx0lqgff 32 10 encoding encode VBG cord-271701-tx0lqgff 32 11 amino amino JJ cord-271701-tx0lqgff 32 12 acids acid NNS cord-271701-tx0lqgff 32 13 3837 3837 CD cord-271701-tx0lqgff 32 14 - - : cord-271701-tx0lqgff 32 15 4117 4117 CD cord-271701-tx0lqgff 32 16 of of IN cord-271701-tx0lqgff 32 17 the the DT cord-271701-tx0lqgff 32 18 SARS SARS NNP cord-271701-tx0lqgff 32 19 - - HYPH cord-271701-tx0lqgff 32 20 CoV CoV NNP cord-271701-tx0lqgff 32 21 replicase replicase NNP cord-271701-tx0lqgff 32 22 pp1a pp1a NNP cord-271701-tx0lqgff 32 23 was be VBD cord-271701-tx0lqgff 32 24 amplified amplify VBN cord-271701-tx0lqgff 32 25 by by IN cord-271701-tx0lqgff 32 26 reverse reverse NN cord-271701-tx0lqgff 32 27 transcriptionpolymerase transcriptionpolymerase NNP cord-271701-tx0lqgff 32 28 chain chain NN cord-271701-tx0lqgff 32 29 reaction reaction NN cord-271701-tx0lqgff 32 30 ( ( -LRB- cord-271701-tx0lqgff 32 31 RT RT NNP cord-271701-tx0lqgff 32 32 - - HYPH cord-271701-tx0lqgff 32 33 PCR PCR NNP cord-271701-tx0lqgff 32 34 ) ) -RRB- cord-271701-tx0lqgff 32 35 from from IN cord-271701-tx0lqgff 32 36 the the DT cord-271701-tx0lqgff 32 37 genome genome NN cord-271701-tx0lqgff 32 38 of of IN cord-271701-tx0lqgff 32 39 SARS SARS NNP cord-271701-tx0lqgff 32 40 - - HYPH cord-271701-tx0lqgff 32 41 CoV CoV NNP cord-271701-tx0lqgff 32 42 isolate isolate NN cord-271701-tx0lqgff 33 1 Frankfurt-1 Frankfurt-1 NNP cord-271701-tx0lqgff 34 1 ( ( -LRB- cord-271701-tx0lqgff 34 2 Genbank Genbank NNP cord-271701-tx0lqgff 34 3 accession accession NN cord-271701-tx0lqgff 34 4 number number NN cord-271701-tx0lqgff 34 5 AY291315 ay291315 NN cord-271701-tx0lqgff 34 6 ) ) -RRB- cord-271701-tx0lqgff 34 7 . . . cord-271701-tx0lqgff 35 1 The the DT cord-271701-tx0lqgff 35 2 primers primer NNS cord-271701-tx0lqgff 35 3 used use VBN cord-271701-tx0lqgff 35 4 were be VBD cord-271701-tx0lqgff 35 5 SAV704 sav704 JJ cord-271701-tx0lqgff 35 6 and and CC cord-271701-tx0lqgff 35 7 SAV429 sav429 JJ cord-271701-tx0lqgff 35 8 ( ( -LRB- cord-271701-tx0lqgff 35 9 Supplementary supplementary JJ cord-271701-tx0lqgff 35 10 Table Table NNP cord-271701-tx0lqgff 35 11 S1 S1 NNP cord-271701-tx0lqgff 35 12 ) ) -RRB- cord-271701-tx0lqgff 35 13 . . . cord-271701-tx0lqgff 36 1 For for IN cord-271701-tx0lqgff 36 2 nsp8 nsp8 JJ cord-271701-tx0lqgff 36 3 expression expression NN cord-271701-tx0lqgff 36 4 , , , cord-271701-tx0lqgff 36 5 the the DT cord-271701-tx0lqgff 36 6 sequence sequence NN cord-271701-tx0lqgff 36 7 encoding encode VBG cord-271701-tx0lqgff 37 1 pp1a pp1a NN cord-271701-tx0lqgff 37 2 residues residue NNS cord-271701-tx0lqgff 37 3 3920 3920 CD cord-271701-tx0lqgff 37 4 to to IN cord-271701-tx0lqgff 37 5 4117 4117 CD cord-271701-tx0lqgff 37 6 was be VBD cord-271701-tx0lqgff 37 7 amplified amplify VBN cord-271701-tx0lqgff 37 8 by by IN cord-271701-tx0lqgff 37 9 RT RT NNP cord-271701-tx0lqgff 37 10 - - HYPH cord-271701-tx0lqgff 37 11 PCR PCR NNP cord-271701-tx0lqgff 37 12 using use VBG cord-271701-tx0lqgff 37 13 SAV428 SAV428 NNP cord-271701-tx0lqgff 37 14 and and CC cord-271701-tx0lqgff 37 15 SAV429 SAV429 NNP cord-271701-tx0lqgff 37 16 as as IN cord-271701-tx0lqgff 37 17 primers primer NNS cord-271701-tx0lqgff 37 18 ( ( -LRB- cord-271701-tx0lqgff 37 19 Supplementary supplementary JJ cord-271701-tx0lqgff 37 20 Table Table NNP cord-271701-tx0lqgff 37 21 S1 S1 NNP cord-271701-tx0lqgff 37 22 ) ) -RRB- cord-271701-tx0lqgff 37 23 . . . cord-271701-tx0lqgff 38 1 Both both DT cord-271701-tx0lqgff 38 2 PCR PCR NNP cord-271701-tx0lqgff 38 3 products product NNS cord-271701-tx0lqgff 38 4 were be VBD cord-271701-tx0lqgff 38 5 digested digest VBN cord-271701-tx0lqgff 38 6 with with IN cord-271701-tx0lqgff 38 7 SacII SacII NNP cord-271701-tx0lqgff 38 8 and and CC cord-271701-tx0lqgff 38 9 BamHI BamHI NNP cord-271701-tx0lqgff 38 10 , , , cord-271701-tx0lqgff 38 11 and and CC cord-271701-tx0lqgff 38 12 ligated ligate VBD cord-271701-tx0lqgff 38 13 into into IN cord-271701-tx0lqgff 38 14 expression expression NN cord-271701-tx0lqgff 38 15 vector vector NN cord-271701-tx0lqgff 38 16 pASK3-Ub pASK3-Ub NNP cord-271701-tx0lqgff 38 17 - - HYPH cord-271701-tx0lqgff 38 18 CHis CHis NNP cord-271701-tx0lqgff 38 19 6 6 CD cord-271701-tx0lqgff 38 20 ( ( -LRB- cord-271701-tx0lqgff 38 21 10 10 CD cord-271701-tx0lqgff 38 22 ) ) -RRB- cord-271701-tx0lqgff 38 23 . . . cord-271701-tx0lqgff 39 1 This this DT cord-271701-tx0lqgff 39 2 vector vector NN cord-271701-tx0lqgff 39 3 was be VBD cord-271701-tx0lqgff 39 4 originally originally RB cord-271701-tx0lqgff 39 5 derived derive VBN cord-271701-tx0lqgff 39 6 from from IN cord-271701-tx0lqgff 39 7 the the DT cord-271701-tx0lqgff 39 8 pET26-Ub pET26-Ub NNS cord-271701-tx0lqgff 39 9 - - : cord-271701-tx0lqgff 39 10 CHis chis $ cord-271701-tx0lqgff 39 11 6 6 CD cord-271701-tx0lqgff 39 12 vector vector NN cord-271701-tx0lqgff 39 13 ( ( -LRB- cord-271701-tx0lqgff 39 14 14 14 CD cord-271701-tx0lqgff 39 15 ) ) -RRB- cord-271701-tx0lqgff 39 16 , , , cord-271701-tx0lqgff 39 17 but but CC cord-271701-tx0lqgff 39 18 drives drive VBZ cord-271701-tx0lqgff 39 19 expression expression NN cord-271701-tx0lqgff 39 20 of of IN cord-271701-tx0lqgff 39 21 N n NN cord-271701-tx0lqgff 39 22 - - HYPH cord-271701-tx0lqgff 39 23 terminally terminally RB cord-271701-tx0lqgff 39 24 ubiquitintagged ubiquitintagge VBN cord-271701-tx0lqgff 39 25 and and CC cord-271701-tx0lqgff 40 1 C c NN cord-271701-tx0lqgff 40 2 - - : cord-271701-tx0lqgff 40 3 terminally terminally RB cord-271701-tx0lqgff 40 4 His -PRON- PRP$ cord-271701-tx0lqgff 40 5 6 6 CD cord-271701-tx0lqgff 40 6 -tagged -tagged CD cord-271701-tx0lqgff 40 7 fusion fusion NN cord-271701-tx0lqgff 40 8 proteins protein NNS cord-271701-tx0lqgff 40 9 via via IN cord-271701-tx0lqgff 40 10 a a DT cord-271701-tx0lqgff 40 11 tetracyclin tetracyclin JJ cord-271701-tx0lqgff 40 12 - - HYPH cord-271701-tx0lqgff 40 13 inducible inducible JJ cord-271701-tx0lqgff 40 14 promoter promoter NN cord-271701-tx0lqgff 40 15 , , , cord-271701-tx0lqgff 40 16 to to TO cord-271701-tx0lqgff 40 17 rule rule VB cord-271701-tx0lqgff 40 18 out out RP cord-271701-tx0lqgff 40 19 the the DT cord-271701-tx0lqgff 40 20 potential potential JJ cord-271701-tx0lqgff 40 21 T7 t7 NN cord-271701-tx0lqgff 40 22 polymerase polymerase NN cord-271701-tx0lqgff 40 23 contaminations contamination NNS cord-271701-tx0lqgff 40 24 that that WDT cord-271701-tx0lqgff 40 25 are be VBP cord-271701-tx0lqgff 40 26 known know VBN cord-271701-tx0lqgff 40 27 to to TO cord-271701-tx0lqgff 40 28 cause cause VB cord-271701-tx0lqgff 40 29 false false JJ cord-271701-tx0lqgff 40 30 positive positive JJ cord-271701-tx0lqgff 40 31 results result NNS cord-271701-tx0lqgff 40 32 when when WRB cord-271701-tx0lqgff 40 33 using use VBG cord-271701-tx0lqgff 40 34 T7 t7 NN cord-271701-tx0lqgff 40 35 promoter promoter NN cord-271701-tx0lqgff 40 36 - - HYPH cord-271701-tx0lqgff 40 37 driven drive VBN cord-271701-tx0lqgff 40 38 systems system NNS cord-271701-tx0lqgff 40 39 for for IN cord-271701-tx0lqgff 40 40 recombinant recombinant JJ cord-271701-tx0lqgff 40 41 RdRp RdRp NNP cord-271701-tx0lqgff 40 42 expression expression NN cord-271701-tx0lqgff 40 43 . . . cord-271701-tx0lqgff 41 1 All all DT cord-271701-tx0lqgff 41 2 described describe VBD cord-271701-tx0lqgff 41 3 nsp8 nsp8 JJ cord-271701-tx0lqgff 41 4 mutants mutant NNS cord-271701-tx0lqgff 41 5 were be VBD cord-271701-tx0lqgff 41 6 engineered engineer VBN cord-271701-tx0lqgff 41 7 via via IN cord-271701-tx0lqgff 41 8 site site NN cord-271701-tx0lqgff 41 9 - - HYPH cord-271701-tx0lqgff 41 10 directed direct VBN cord-271701-tx0lqgff 41 11 mutagenesis mutagenesis NN cord-271701-tx0lqgff 41 12 according accord VBG cord-271701-tx0lqgff 41 13 to to IN cord-271701-tx0lqgff 41 14 the the DT cord-271701-tx0lqgff 41 15 QuikChange QuikChange NNP cord-271701-tx0lqgff 41 16 protocol protocol NN cord-271701-tx0lqgff 41 17 ( ( -LRB- cord-271701-tx0lqgff 41 18 Stratagene Stratagene NNP cord-271701-tx0lqgff 41 19 ) ) -RRB- cord-271701-tx0lqgff 41 20 using use VBG cord-271701-tx0lqgff 41 21 the the DT cord-271701-tx0lqgff 41 22 primers primer NNS cord-271701-tx0lqgff 41 23 listed list VBN cord-271701-tx0lqgff 41 24 in in IN cord-271701-tx0lqgff 41 25 Supplementary Supplementary NNP cord-271701-tx0lqgff 41 26 Table Table NNP cord-271701-tx0lqgff 41 27 S2 s2 NN cord-271701-tx0lqgff 41 28 . . . cord-271701-tx0lqgff 42 1 For for IN cord-271701-tx0lqgff 42 2 nsp7 nsp7 JJ cord-271701-tx0lqgff 42 3 - - SYM cord-271701-tx0lqgff 42 4 8 8 CD cord-271701-tx0lqgff 42 5 or or CC cord-271701-tx0lqgff 42 6 nsp8 nsp8 JJ cord-271701-tx0lqgff 42 7 expression expression NN cord-271701-tx0lqgff 42 8 , , , cord-271701-tx0lqgff 42 9 Escherichia Escherichia NNP cord-271701-tx0lqgff 42 10 coli coli NNS cord-271701-tx0lqgff 43 1 C2523 C2523 NNP cord-271701-tx0lqgff 43 2 cells cell NNS cord-271701-tx0lqgff 43 3 ( ( -LRB- cord-271701-tx0lqgff 43 4 New New NNP cord-271701-tx0lqgff 43 5 England England NNP cord-271701-tx0lqgff 43 6 Biolabs Biolabs NNP cord-271701-tx0lqgff 43 7 ) ) -RRB- cord-271701-tx0lqgff 43 8 were be VBD cord-271701-tx0lqgff 43 9 transformed transform VBN cord-271701-tx0lqgff 43 10 with with IN cord-271701-tx0lqgff 43 11 the the DT cord-271701-tx0lqgff 43 12 plasmids plasmid NNS cord-271701-tx0lqgff 44 1 pASK3-Ub pASK3-Ub NNP cord-271701-tx0lqgff 44 2 - - HYPH cord-271701-tx0lqgff 44 3 nsp7 nsp7 NN cord-271701-tx0lqgff 44 4 - - HYPH cord-271701-tx0lqgff 44 5 8-CHis 8-chis CD cord-271701-tx0lqgff 44 6 6 6 CD cord-271701-tx0lqgff 44 7 or or CC cord-271701-tx0lqgff 44 8 pASK3-Ub pASK3-Ub NNP cord-271701-tx0lqgff 44 9 - - HYPH cord-271701-tx0lqgff 44 10 nsp8-CHis nsp8-chis NN cord-271701-tx0lqgff 44 11 6 6 CD cord-271701-tx0lqgff 44 12 together together RB cord-271701-tx0lqgff 44 13 with with IN cord-271701-tx0lqgff 44 14 the the DT cord-271701-tx0lqgff 44 15 Ubp1 ubp1 JJ cord-271701-tx0lqgff 44 16 protease protease NN cord-271701-tx0lqgff 44 17 expression expression NN cord-271701-tx0lqgff 44 18 plasmid plasmid NN cord-271701-tx0lqgff 44 19 pCG1 pCG1 NNP cord-271701-tx0lqgff 44 20 ( ( -LRB- cord-271701-tx0lqgff 44 21 14 14 CD cord-271701-tx0lqgff 44 22 ) ) -RRB- cord-271701-tx0lqgff 44 23 . . . cord-271701-tx0lqgff 45 1 Routinely routinely RB cord-271701-tx0lqgff 45 2 , , , cord-271701-tx0lqgff 45 3 50 50 CD cord-271701-tx0lqgff 45 4 ml ml NNS cord-271701-tx0lqgff 45 5 of of IN cord-271701-tx0lqgff 45 6 Luria Luria NNP cord-271701-tx0lqgff 45 7 Broth Broth NNP cord-271701-tx0lqgff 45 8 , , , cord-271701-tx0lqgff 45 9 containing contain VBG cord-271701-tx0lqgff 45 10 ampicillin ampicillin NN cord-271701-tx0lqgff 45 11 ( ( -LRB- cord-271701-tx0lqgff 45 12 50 50 CD cord-271701-tx0lqgff 45 13 mg mg NNP cord-271701-tx0lqgff 45 14 / / SYM cord-271701-tx0lqgff 45 15 ml ml NNP cord-271701-tx0lqgff 45 16 ) ) -RRB- cord-271701-tx0lqgff 45 17 and and CC cord-271701-tx0lqgff 45 18 chloramphenicol chloramphenicol NNP cord-271701-tx0lqgff 45 19 ( ( -LRB- cord-271701-tx0lqgff 45 20 34 34 CD cord-271701-tx0lqgff 45 21 mg mg NNP cord-271701-tx0lqgff 45 22 / / SYM cord-271701-tx0lqgff 45 23 ml ml NNP cord-271701-tx0lqgff 45 24 ) ) -RRB- cord-271701-tx0lqgff 45 25 , , , cord-271701-tx0lqgff 45 26 was be VBD cord-271701-tx0lqgff 45 27 inoculated inoculate VBN cord-271701-tx0lqgff 45 28 1:1000 1:1000 CD cord-271701-tx0lqgff 46 1 with with IN cord-271701-tx0lqgff 46 2 o o NNP cord-271701-tx0lqgff 46 3 / / SYM cord-271701-tx0lqgff 46 4 n n CC cord-271701-tx0lqgff 46 5 precultures preculture NNS cord-271701-tx0lqgff 46 6 , , , cord-271701-tx0lqgff 46 7 and and CC cord-271701-tx0lqgff 46 8 cells cell NNS cord-271701-tx0lqgff 46 9 were be VBD cord-271701-tx0lqgff 46 10 grown grow VBN cord-271701-tx0lqgff 46 11 to to IN cord-271701-tx0lqgff 46 12 OD OD NNP cord-271701-tx0lqgff 46 13 600 600 CD cord-271701-tx0lqgff 46 14 > > XX cord-271701-tx0lqgff 46 15 0.8 0.8 CD cord-271701-tx0lqgff 46 16 at at IN cord-271701-tx0lqgff 46 17 37 37 CD cord-271701-tx0lqgff 46 18 C. c. NN cord-271701-tx0lqgff 47 1 Subsequently subsequently RB cord-271701-tx0lqgff 47 2 , , , cord-271701-tx0lqgff 47 3 the the DT cord-271701-tx0lqgff 47 4 cells cell NNS cord-271701-tx0lqgff 47 5 were be VBD cord-271701-tx0lqgff 47 6 slowly slowly RB cord-271701-tx0lqgff 47 7 cooled cool VBN cord-271701-tx0lqgff 47 8 to to IN cord-271701-tx0lqgff 47 9 20 20 CD cord-271701-tx0lqgff 47 10 C c NN cord-271701-tx0lqgff 47 11 , , , cord-271701-tx0lqgff 47 12 followed follow VBN cord-271701-tx0lqgff 47 13 by by IN cord-271701-tx0lqgff 47 14 induction induction NN cord-271701-tx0lqgff 47 15 with with IN cord-271701-tx0lqgff 47 16 anhydrotetracycline anhydrotetracycline NN cord-271701-tx0lqgff 47 17 ( ( -LRB- cord-271701-tx0lqgff 47 18 Fluka Fluka NNP cord-271701-tx0lqgff 47 19 ) ) -RRB- cord-271701-tx0lqgff 47 20 at at IN cord-271701-tx0lqgff 47 21 a a DT cord-271701-tx0lqgff 47 22 final final JJ cord-271701-tx0lqgff 47 23 concentration concentration NN cord-271701-tx0lqgff 47 24 of of IN cord-271701-tx0lqgff 47 25 200 200 CD cord-271701-tx0lqgff 47 26 ng ng NN cord-271701-tx0lqgff 47 27 / / SYM cord-271701-tx0lqgff 47 28 ml ml NN cord-271701-tx0lqgff 47 29 for for IN cord-271701-tx0lqgff 47 30 16 16 CD cord-271701-tx0lqgff 47 31 h. h. NN cord-271701-tx0lqgff 47 32 Expression expression NN cord-271701-tx0lqgff 47 33 at at IN cord-271701-tx0lqgff 47 34 20 20 CD cord-271701-tx0lqgff 47 35 C c NN cord-271701-tx0lqgff 47 36 was be VBD cord-271701-tx0lqgff 47 37 , , , cord-271701-tx0lqgff 47 38 however however RB cord-271701-tx0lqgff 47 39 , , , cord-271701-tx0lqgff 47 40 only only RB cord-271701-tx0lqgff 47 41 crucial crucial JJ cord-271701-tx0lqgff 47 42 for for IN cord-271701-tx0lqgff 47 43 the the DT cord-271701-tx0lqgff 47 44 preparation preparation NN cord-271701-tx0lqgff 47 45 of of IN cord-271701-tx0lqgff 47 46 certain certain JJ cord-271701-tx0lqgff 47 47 nsp8 nsp8 JJ cord-271701-tx0lqgff 47 48 mutants mutant NNS cord-271701-tx0lqgff 47 49 and and CC cord-271701-tx0lqgff 47 50 similar similar JJ cord-271701-tx0lqgff 47 51 yields yield NNS cord-271701-tx0lqgff 47 52 of of IN cord-271701-tx0lqgff 47 53 active active JJ cord-271701-tx0lqgff 47 54 wild wild JJ cord-271701-tx0lqgff 47 55 - - HYPH cord-271701-tx0lqgff 47 56 type type NN cord-271701-tx0lqgff 47 57 protein protein NN cord-271701-tx0lqgff 47 58 could could MD cord-271701-tx0lqgff 47 59 be be VB cord-271701-tx0lqgff 47 60 obtained obtain VBN cord-271701-tx0lqgff 47 61 by by IN cord-271701-tx0lqgff 47 62 expression expression NN cord-271701-tx0lqgff 47 63 at at IN cord-271701-tx0lqgff 47 64 37 37 CD cord-271701-tx0lqgff 47 65 C c NN cord-271701-tx0lqgff 47 66 for for IN cord-271701-tx0lqgff 47 67 3 3 CD cord-271701-tx0lqgff 47 68 - - SYM cord-271701-tx0lqgff 47 69 4 4 CD cord-271701-tx0lqgff 47 70 h. h. NNP cord-271701-tx0lqgff 47 71 Cells cell NNS cord-271701-tx0lqgff 47 72 were be VBD cord-271701-tx0lqgff 47 73 harvested harvest VBN cord-271701-tx0lqgff 47 74 by by IN cord-271701-tx0lqgff 47 75 centrifugation centrifugation NN cord-271701-tx0lqgff 47 76 and and CC cord-271701-tx0lqgff 47 77 stored store VBN cord-271701-tx0lqgff 47 78 at at IN cord-271701-tx0lqgff 47 79 20 20 CD cord-271701-tx0lqgff 47 80 C c NN cord-271701-tx0lqgff 47 81 until until IN cord-271701-tx0lqgff 47 82 protein protein NN cord-271701-tx0lqgff 47 83 purification purification NN cord-271701-tx0lqgff 47 84 was be VBD cord-271701-tx0lqgff 47 85 started start VBN cord-271701-tx0lqgff 47 86 . . . cord-271701-tx0lqgff 48 1 The the DT cord-271701-tx0lqgff 48 2 expression expression NN cord-271701-tx0lqgff 48 3 of of IN cord-271701-tx0lqgff 48 4 SARS SARS NNP cord-271701-tx0lqgff 48 5 - - HYPH cord-271701-tx0lqgff 48 6 CoV CoV NNP cord-271701-tx0lqgff 48 7 nsp7 nsp7 NN cord-271701-tx0lqgff 48 8 with with IN cord-271701-tx0lqgff 48 9 a a DT cord-271701-tx0lqgff 48 10 C c NN cord-271701-tx0lqgff 48 11 - - HYPH cord-271701-tx0lqgff 48 12 terminal terminal NN cord-271701-tx0lqgff 49 1 His -PRON- PRP$ cord-271701-tx0lqgff 49 2 6 6 CD cord-271701-tx0lqgff 49 3 -tag -tag : cord-271701-tx0lqgff 49 4 ( ( -LRB- cord-271701-tx0lqgff 49 5 nsp7-His nsp7-his NN cord-271701-tx0lqgff 49 6 ) ) -RRB- cord-271701-tx0lqgff 49 7 was be VBD cord-271701-tx0lqgff 49 8 achieved achieve VBN cord-271701-tx0lqgff 49 9 from from IN cord-271701-tx0lqgff 49 10 plasmid plasmid NN cord-271701-tx0lqgff 49 11 pDEST14-nsp7-His pDEST14-nsp7-His NNP cord-271701-tx0lqgff 49 12 6 6 CD cord-271701-tx0lqgff 49 13 according accord VBG cord-271701-tx0lqgff 49 14 to to IN cord-271701-tx0lqgff 49 15 the the DT cord-271701-tx0lqgff 49 16 protocol protocol NN cord-271701-tx0lqgff 49 17 previously previously RB cord-271701-tx0lqgff 49 18 described describe VBN cord-271701-tx0lqgff 49 19 for for IN cord-271701-tx0lqgff 49 20 EAV EAV NNP cord-271701-tx0lqgff 49 21 nsp9 nsp9 NNP cord-271701-tx0lqgff 49 22 ( ( -LRB- cord-271701-tx0lqgff 49 23 11 11 CD cord-271701-tx0lqgff 49 24 ) ) -RRB- cord-271701-tx0lqgff 49 25 . . . cord-271701-tx0lqgff 50 1 SARS SARS NNP cord-271701-tx0lqgff 50 2 - - HYPH cord-271701-tx0lqgff 50 3 CoV CoV NNP cord-271701-tx0lqgff 50 4 nsp5-His nsp5-His NNP cord-271701-tx0lqgff 50 5 6 6 CD cord-271701-tx0lqgff 50 6 ( ( -LRB- cord-271701-tx0lqgff 50 7 nsp5-His nsp5-His NNP cord-271701-tx0lqgff 50 8 ) ) -RRB- cord-271701-tx0lqgff 50 9 was be VBD cord-271701-tx0lqgff 50 10 expressed express VBN cord-271701-tx0lqgff 50 11 as as IN cord-271701-tx0lqgff 50 12 a a DT cord-271701-tx0lqgff 50 13 self self NN cord-271701-tx0lqgff 50 14 - - HYPH cord-271701-tx0lqgff 50 15 cleaving cleave VBG cord-271701-tx0lqgff 50 16 maltose maltose NN cord-271701-tx0lqgff 50 17 binding bind VBG cord-271701-tx0lqgff 50 18 protein protein NN cord-271701-tx0lqgff 50 19 ( ( -LRB- cord-271701-tx0lqgff 50 20 MBP)-fusion MBP)-fusion VBG cord-271701-tx0lqgff 50 21 protein protein NN cord-271701-tx0lqgff 50 22 and and CC cord-271701-tx0lqgff 50 23 was be VBD cord-271701-tx0lqgff 50 24 purified purify VBN cord-271701-tx0lqgff 50 25 via via IN cord-271701-tx0lqgff 50 26 its -PRON- PRP$ cord-271701-tx0lqgff 50 27 C c NN cord-271701-tx0lqgff 50 28 - - HYPH cord-271701-tx0lqgff 50 29 terminal terminal NN cord-271701-tx0lqgff 51 1 His -PRON- PRP$ cord-271701-tx0lqgff 51 2 6 6 CD cord-271701-tx0lqgff 51 3 -tag -tag : cord-271701-tx0lqgff 51 4 ( ( -LRB- cord-271701-tx0lqgff 51 5 15 15 CD cord-271701-tx0lqgff 51 6 ) ) -RRB- cord-271701-tx0lqgff 51 7 . . . cord-271701-tx0lqgff 52 1 The the DT cord-271701-tx0lqgff 52 2 pASK3-His pask3-his CD cord-271701-tx0lqgff 52 3 - - HYPH cord-271701-tx0lqgff 52 4 nsp8 nsp8 JJ cord-271701-tx0lqgff 52 5 plasmid plasmid NN cord-271701-tx0lqgff 52 6 for for IN cord-271701-tx0lqgff 52 7 expression expression NN cord-271701-tx0lqgff 52 8 of of IN cord-271701-tx0lqgff 52 9 the the DT cord-271701-tx0lqgff 52 10 N n NN cord-271701-tx0lqgff 52 11 - - HYPH cord-271701-tx0lqgff 52 12 terminally terminally RB cord-271701-tx0lqgff 52 13 His -PRON- PRP$ cord-271701-tx0lqgff 52 14 6 6 CD cord-271701-tx0lqgff 52 15 -tagged -tagged CD cord-271701-tx0lqgff 53 1 The the DT cord-271701-tx0lqgff 53 2 coronavirus coronavirus NN cord-271701-tx0lqgff 53 3 genome genome NN cord-271701-tx0lqgff 53 4 contains contain VBZ cord-271701-tx0lqgff 53 5 two two CD cord-271701-tx0lqgff 53 6 large large JJ cord-271701-tx0lqgff 53 7 5 5 CD cord-271701-tx0lqgff 53 8 0 0 CD cord-271701-tx0lqgff 53 9 -proximal -proximal CD cord-271701-tx0lqgff 53 10 ORFs ORFs NNP cord-271701-tx0lqgff 53 11 ( ( -LRB- cord-271701-tx0lqgff 53 12 ORF1a ORF1a NNP cord-271701-tx0lqgff 53 13 and and CC cord-271701-tx0lqgff 53 14 1 1 CD cord-271701-tx0lqgff 53 15 b b NN cord-271701-tx0lqgff 53 16 ) ) -RRB- cord-271701-tx0lqgff 53 17 that that WDT cord-271701-tx0lqgff 53 18 encode encode VBP cord-271701-tx0lqgff 53 19 the the DT cord-271701-tx0lqgff 53 20 two two CD cord-271701-tx0lqgff 53 21 replicase replicase NN cord-271701-tx0lqgff 53 22 polyproteins polyprotein NNS cord-271701-tx0lqgff 53 23 , , , cord-271701-tx0lqgff 53 24 whose whose WP$ cord-271701-tx0lqgff 53 25 mature mature JJ cord-271701-tx0lqgff 53 26 products product NNS cord-271701-tx0lqgff 53 27 assemble assemble VB cord-271701-tx0lqgff 53 28 into into IN cord-271701-tx0lqgff 53 29 the the DT cord-271701-tx0lqgff 53 30 viral viral JJ cord-271701-tx0lqgff 53 31 replication replication NN cord-271701-tx0lqgff 53 32 and and CC cord-271701-tx0lqgff 53 33 transcription transcription NN cord-271701-tx0lqgff 53 34 complex complex NN cord-271701-tx0lqgff 53 35 . . . cord-271701-tx0lqgff 54 1 Both both DT cord-271701-tx0lqgff 54 2 polyproteins polyprotein NNS cord-271701-tx0lqgff 54 3 are be VBP cord-271701-tx0lqgff 54 4 cleaved cleave VBN cord-271701-tx0lqgff 54 5 ( ( -LRB- cord-271701-tx0lqgff 54 6 cleavage cleavage NN cord-271701-tx0lqgff 54 7 sites site NNS cord-271701-tx0lqgff 54 8 indicated indicate VBN cord-271701-tx0lqgff 54 9 with with IN cord-271701-tx0lqgff 54 10 arrow arrow NN cord-271701-tx0lqgff 54 11 heads head NNS cord-271701-tx0lqgff 54 12 ) ) -RRB- cord-271701-tx0lqgff 54 13 by by IN cord-271701-tx0lqgff 54 14 the the DT cord-271701-tx0lqgff 54 15 proteinase proteinase NN cord-271701-tx0lqgff 54 16 activities activity NNS cord-271701-tx0lqgff 54 17 of of IN cord-271701-tx0lqgff 54 18 nsp3 nsp3 NNS cord-271701-tx0lqgff 54 19 ( ( -LRB- cord-271701-tx0lqgff 54 20 black black JJ cord-271701-tx0lqgff 54 21 lines line NNS cord-271701-tx0lqgff 54 22 ) ) -RRB- cord-271701-tx0lqgff 54 23 and and CC cord-271701-tx0lqgff 54 24 nsp5 nsp5 NNP cord-271701-tx0lqgff 54 25 ( ( -LRB- cord-271701-tx0lqgff 54 26 red red JJ cord-271701-tx0lqgff 54 27 lines line NNS cord-271701-tx0lqgff 54 28 ) ) -RRB- cord-271701-tx0lqgff 54 29 , , , cord-271701-tx0lqgff 54 30 which which WDT cord-271701-tx0lqgff 54 31 releases release VBZ cord-271701-tx0lqgff 54 32 the the DT cord-271701-tx0lqgff 54 33 mature mature JJ cord-271701-tx0lqgff 54 34 nsps nsp NNS cord-271701-tx0lqgff 54 35 . . . cord-271701-tx0lqgff 55 1 Also also RB cord-271701-tx0lqgff 55 2 indicated indicate VBN cord-271701-tx0lqgff 55 3 are be VBP cord-271701-tx0lqgff 55 4 the the DT cord-271701-tx0lqgff 55 5 5 5 CD cord-271701-tx0lqgff 55 6 0 0 CD cord-271701-tx0lqgff 55 7 cap cap NN cord-271701-tx0lqgff 55 8 structure structure NN cord-271701-tx0lqgff 55 9 and and CC cord-271701-tx0lqgff 55 10 the the DT cord-271701-tx0lqgff 55 11 3 3 CD cord-271701-tx0lqgff 55 12 0 0 CD cord-271701-tx0lqgff 55 13 polyA polyA NNP cord-271701-tx0lqgff 55 14 tail tail NN cord-271701-tx0lqgff 55 15 ( ( -LRB- cord-271701-tx0lqgff 55 16 A a NN cord-271701-tx0lqgff 55 17 n n NN cord-271701-tx0lqgff 55 18 ) ) -RRB- cord-271701-tx0lqgff 55 19 . . . cord-271701-tx0lqgff 56 1 ( ( -LRB- cord-271701-tx0lqgff 56 2 B b NN cord-271701-tx0lqgff 56 3 ) ) -RRB- cord-271701-tx0lqgff 57 1 The the DT cord-271701-tx0lqgff 57 2 SARS SARS NNP cord-271701-tx0lqgff 57 3 - - HYPH cord-271701-tx0lqgff 57 4 CoV CoV NNP cord-271701-tx0lqgff 57 5 nsp8 nsp8 NNP cord-271701-tx0lqgff 57 6 crystal crystal NNP cord-271701-tx0lqgff 57 7 structure structure NN cord-271701-tx0lqgff 57 8 ( ( -LRB- cord-271701-tx0lqgff 57 9 pdb pdb NNP cord-271701-tx0lqgff 57 10 2AHM 2ahm CD cord-271701-tx0lqgff 57 11 ) ) -RRB- cord-271701-tx0lqgff 57 12 resembles resemble VBZ cord-271701-tx0lqgff 57 13 a a DT cord-271701-tx0lqgff 57 14 ' ' `` cord-271701-tx0lqgff 57 15 golf golf NN cord-271701-tx0lqgff 57 16 club club NN cord-271701-tx0lqgff 57 17 - - HYPH cord-271701-tx0lqgff 57 18 like like JJ cord-271701-tx0lqgff 57 19 ' ' '' cord-271701-tx0lqgff 57 20 shape shape NN cord-271701-tx0lqgff 57 21 , , , cord-271701-tx0lqgff 57 22 as as IN cord-271701-tx0lqgff 57 23 presented present VBN cord-271701-tx0lqgff 57 24 by by IN cord-271701-tx0lqgff 57 25 the the DT cord-271701-tx0lqgff 57 26 yellow yellow JJ cord-271701-tx0lqgff 57 27 ribbon ribbon NN cord-271701-tx0lqgff 57 28 structure structure NN cord-271701-tx0lqgff 57 29 . . . cord-271701-tx0lqgff 58 1 This this DT cord-271701-tx0lqgff 58 2 nsp8 nsp8 JJ cord-271701-tx0lqgff 58 3 conformation conformation NN cord-271701-tx0lqgff 58 4 connects connect VBZ cord-271701-tx0lqgff 58 5 to to IN cord-271701-tx0lqgff 58 6 a a DT cord-271701-tx0lqgff 58 7 much much RB cord-271701-tx0lqgff 58 8 larger large JJR cord-271701-tx0lqgff 58 9 , , , cord-271701-tx0lqgff 58 10 hexadecameric hexadecameric NNP cord-271701-tx0lqgff 58 11 structure structure NN cord-271701-tx0lqgff 58 12 that that WDT cord-271701-tx0lqgff 58 13 is be VBZ cord-271701-tx0lqgff 58 14 composed compose VBN cord-271701-tx0lqgff 58 15 of of IN cord-271701-tx0lqgff 58 16 seven seven CD cord-271701-tx0lqgff 58 17 additional additional JJ cord-271701-tx0lqgff 58 18 nsp8 nsp8 JJ cord-271701-tx0lqgff 58 19 subunits subunit NNS cord-271701-tx0lqgff 58 20 ( ( -LRB- cord-271701-tx0lqgff 58 21 grey grey NNP cord-271701-tx0lqgff 58 22 ) ) -RRB- cord-271701-tx0lqgff 58 23 and and CC cord-271701-tx0lqgff 58 24 eight eight CD cord-271701-tx0lqgff 58 25 nsp7 nsp7 NNP cord-271701-tx0lqgff 58 26 subunits subunit NNS cord-271701-tx0lqgff 58 27 ( ( -LRB- cord-271701-tx0lqgff 58 28 green green JJ cord-271701-tx0lqgff 58 29 ) ) -RRB- cord-271701-tx0lqgff 58 30 . . . cord-271701-tx0lqgff 59 1 The the DT cord-271701-tx0lqgff 59 2 hollow hollow JJ cord-271701-tx0lqgff 59 3 hexadecameric hexadecameric NNP cord-271701-tx0lqgff 59 4 ring ring NN cord-271701-tx0lqgff 59 5 structure structure NN cord-271701-tx0lqgff 59 6 has have VBZ cord-271701-tx0lqgff 59 7 a a DT cord-271701-tx0lqgff 59 8 positively positively RB cord-271701-tx0lqgff 59 9 charged charge VBN cord-271701-tx0lqgff 59 10 channel channel NN cord-271701-tx0lqgff 59 11 ( ( -LRB- cord-271701-tx0lqgff 59 12 blue blue JJ cord-271701-tx0lqgff 59 13 background background NN cord-271701-tx0lqgff 59 14 shading shade VBG cord-271701-tx0lqgff 59 15 ) ) -RRB- cord-271701-tx0lqgff 59 16 that that WDT cord-271701-tx0lqgff 59 17 was be VBD cord-271701-tx0lqgff 59 18 proposed propose VBN cord-271701-tx0lqgff 59 19 to to TO cord-271701-tx0lqgff 59 20 mediate mediate VB cord-271701-tx0lqgff 59 21 RNA RNA NNP cord-271701-tx0lqgff 59 22 binding binding NN cord-271701-tx0lqgff 59 23 . . . cord-271701-tx0lqgff 60 1 The the DT cord-271701-tx0lqgff 60 2 outside outside NN cord-271701-tx0lqgff 60 3 of of IN cord-271701-tx0lqgff 60 4 the the DT cord-271701-tx0lqgff 60 5 structure structure NN cord-271701-tx0lqgff 60 6 is be VBZ cord-271701-tx0lqgff 60 7 predominantly predominantly RB cord-271701-tx0lqgff 60 8 negatively negatively RB cord-271701-tx0lqgff 60 9 charged charge VBN cord-271701-tx0lqgff 60 10 ( ( -LRB- cord-271701-tx0lqgff 60 11 red red JJ cord-271701-tx0lqgff 60 12 background background NN cord-271701-tx0lqgff 60 13 shading shade VBG cord-271701-tx0lqgff 60 14 ) ) -RRB- cord-271701-tx0lqgff 60 15 . . . cord-271701-tx0lqgff 61 1 nsp8 nsp8 NN cord-271701-tx0lqgff 61 2 was be VBD cord-271701-tx0lqgff 61 3 kindly kindly RB cord-271701-tx0lqgff 61 4 provided provide VBN cord-271701-tx0lqgff 61 5 by by IN cord-271701-tx0lqgff 61 6 Dr Dr NNP cord-271701-tx0lqgff 61 7 Imbert Imbert NNP cord-271701-tx0lqgff 61 8 and and CC cord-271701-tx0lqgff 61 9 Dr Dr NNP cord-271701-tx0lqgff 61 10 Canard Canard NNP cord-271701-tx0lqgff 62 1 ( ( -LRB- cord-271701-tx0lqgff 62 2 University University NNP cord-271701-tx0lqgff 62 3 of of IN cord-271701-tx0lqgff 62 4 Marseille Marseille NNP cord-271701-tx0lqgff 62 5 , , , cord-271701-tx0lqgff 62 6 France France NNP cord-271701-tx0lqgff 62 7 ) ) -RRB- cord-271701-tx0lqgff 62 8 . . . cord-271701-tx0lqgff 63 1 Purification purification NN cord-271701-tx0lqgff 63 2 of of IN cord-271701-tx0lqgff 63 3 SARS SARS NNP cord-271701-tx0lqgff 63 4 - - HYPH cord-271701-tx0lqgff 63 5 CoV CoV NNP cord-271701-tx0lqgff 63 6 nsp8 nsp8 NN cord-271701-tx0lqgff 63 7 , , , cord-271701-tx0lqgff 63 8 nsp7 nsp7 NNP cord-271701-tx0lqgff 63 9 - - SYM cord-271701-tx0lqgff 63 10 8 8 CD cord-271701-tx0lqgff 63 11 and and CC cord-271701-tx0lqgff 63 12 nsp7 nsp7 JJ cord-271701-tx0lqgff 63 13 Bacterial bacterial JJ cord-271701-tx0lqgff 63 14 pellets pellet NNS cord-271701-tx0lqgff 63 15 were be VBD cord-271701-tx0lqgff 63 16 thawed thaw VBN cord-271701-tx0lqgff 63 17 on on IN cord-271701-tx0lqgff 63 18 ice ice NN cord-271701-tx0lqgff 63 19 , , , cord-271701-tx0lqgff 63 20 resuspended resuspend VBN cord-271701-tx0lqgff 63 21 in in IN cord-271701-tx0lqgff 63 22 buffer buffer NN cord-271701-tx0lqgff 64 1 A a DT cord-271701-tx0lqgff 64 2 [ [ -LRB- cord-271701-tx0lqgff 64 3 20 20 CD cord-271701-tx0lqgff 64 4 mM mm NN cord-271701-tx0lqgff 65 1 HEPES HEPES NNP cord-271701-tx0lqgff 65 2 pH pH NNP cord-271701-tx0lqgff 65 3 7.4 7.4 CD cord-271701-tx0lqgff 65 4 , , , cord-271701-tx0lqgff 65 5 10 10 CD cord-271701-tx0lqgff 65 6 mM mm CD cord-271701-tx0lqgff 65 7 imidazole imidazole NN cord-271701-tx0lqgff 65 8 , , , cord-271701-tx0lqgff 65 9 0.05 0.05 CD cord-271701-tx0lqgff 65 10 % % NN cord-271701-tx0lqgff 65 11 Tween-20 Tween-20 NNP cord-271701-tx0lqgff 65 12 , , , cord-271701-tx0lqgff 65 13 5 5 CD cord-271701-tx0lqgff 65 14 mM mm CD cord-271701-tx0lqgff 65 15 b b NN cord-271701-tx0lqgff 65 16 - - HYPH cord-271701-tx0lqgff 65 17 mercaptoethanol mercaptoethanol NNP cord-271701-tx0lqgff 65 18 and and CC cord-271701-tx0lqgff 65 19 EDTA edta NN cord-271701-tx0lqgff 65 20 - - HYPH cord-271701-tx0lqgff 65 21 free free JJ cord-271701-tx0lqgff 65 22 protease protease NN cord-271701-tx0lqgff 65 23 inhibitor inhibitor NN cord-271701-tx0lqgff 65 24 cocktail cocktail NN cord-271701-tx0lqgff 65 25 ( ( -LRB- cord-271701-tx0lqgff 65 26 Roche Roche NNP cord-271701-tx0lqgff 65 27 ) ) -RRB- cord-271701-tx0lqgff 65 28 ] ] -RRB- cord-271701-tx0lqgff 66 1 containing contain VBG cord-271701-tx0lqgff 66 2 500 500 CD cord-271701-tx0lqgff 66 3 mM mm CD cord-271701-tx0lqgff 66 4 NaCl nacl NN cord-271701-tx0lqgff 66 5 , , , cord-271701-tx0lqgff 66 6 and and CC cord-271701-tx0lqgff 66 7 lysed lyse VBN cord-271701-tx0lqgff 66 8 by by IN cord-271701-tx0lqgff 66 9 sonication sonication NN cord-271701-tx0lqgff 66 10 . . . cord-271701-tx0lqgff 67 1 The the DT cord-271701-tx0lqgff 67 2 supernatant supernatant NN cord-271701-tx0lqgff 67 3 was be VBD cord-271701-tx0lqgff 67 4 cleared clear VBN cord-271701-tx0lqgff 67 5 by by IN cord-271701-tx0lqgff 67 6 ultracentrifugation ultracentrifugation NN cord-271701-tx0lqgff 67 7 at at IN cord-271701-tx0lqgff 67 8 20 20 CD cord-271701-tx0lqgff 67 9 000 000 CD cord-271701-tx0lqgff 67 10 g g NN cord-271701-tx0lqgff 67 11 for for IN cord-271701-tx0lqgff 67 12 30 30 CD cord-271701-tx0lqgff 67 13 min min NN cord-271701-tx0lqgff 67 14 and and CC cord-271701-tx0lqgff 67 15 subsequently subsequently RB cord-271701-tx0lqgff 67 16 incubated incubate VBN cord-271701-tx0lqgff 67 17 with with IN cord-271701-tx0lqgff 67 18 Talon Talon NNP cord-271701-tx0lqgff 67 19 beads bead NNS cord-271701-tx0lqgff 67 20 ( ( -LRB- cord-271701-tx0lqgff 67 21 Clontech Clontech NNP cord-271701-tx0lqgff 67 22 ) ) -RRB- cord-271701-tx0lqgff 67 23 for for IN cord-271701-tx0lqgff 67 24 2 2 CD cord-271701-tx0lqgff 67 25 h h NN cord-271701-tx0lqgff 67 26 at at IN cord-271701-tx0lqgff 67 27 4 4 CD cord-271701-tx0lqgff 67 28 C. c. NN cord-271701-tx0lqgff 68 1 The the DT cord-271701-tx0lqgff 68 2 beads bead NNS cord-271701-tx0lqgff 68 3 were be VBD cord-271701-tx0lqgff 68 4 washed wash VBN cord-271701-tx0lqgff 68 5 four four CD cord-271701-tx0lqgff 68 6 times time NNS cord-271701-tx0lqgff 68 7 15 15 CD cord-271701-tx0lqgff 68 8 min min NN cord-271701-tx0lqgff 68 9 with with IN cord-271701-tx0lqgff 68 10 20 20 CD cord-271701-tx0lqgff 68 11 volumes volume NNS cord-271701-tx0lqgff 68 12 of of IN cord-271701-tx0lqgff 68 13 binding bind VBG cord-271701-tx0lqgff 68 14 buffer buffer NN cord-271701-tx0lqgff 68 15 . . . cord-271701-tx0lqgff 69 1 Ultimately ultimately RB cord-271701-tx0lqgff 69 2 , , , cord-271701-tx0lqgff 69 3 the the DT cord-271701-tx0lqgff 69 4 C c NN cord-271701-tx0lqgff 69 5 - - , cord-271701-tx0lqgff 69 6 terminally terminally RB cord-271701-tx0lqgff 69 7 His -PRON- PRP$ cord-271701-tx0lqgff 69 8 6 6 CD cord-271701-tx0lqgff 69 9 -tagged -tagged CD cord-271701-tx0lqgff 69 10 proteins protein NNS cord-271701-tx0lqgff 69 11 were be VBD cord-271701-tx0lqgff 69 12 eluted elute VBN cord-271701-tx0lqgff 69 13 with with IN cord-271701-tx0lqgff 69 14 150 150 CD cord-271701-tx0lqgff 69 15 mM mm CD cord-271701-tx0lqgff 69 16 imidazole imidazole NN cord-271701-tx0lqgff 69 17 in in IN cord-271701-tx0lqgff 69 18 buffer buffer NN cord-271701-tx0lqgff 69 19 A A NNP cord-271701-tx0lqgff 69 20 containing contain VBG cord-271701-tx0lqgff 69 21 150 150 CD cord-271701-tx0lqgff 69 22 mM mm CD cord-271701-tx0lqgff 69 23 NaCl nacl NN cord-271701-tx0lqgff 69 24 , , , cord-271701-tx0lqgff 69 25 or or CC cord-271701-tx0lqgff 69 26 cleaved cleave VBN cord-271701-tx0lqgff 69 27 off off IN cord-271701-tx0lqgff 69 28 of of IN cord-271701-tx0lqgff 69 29 the the DT cord-271701-tx0lqgff 69 30 column column NN cord-271701-tx0lqgff 69 31 during during IN cord-271701-tx0lqgff 69 32 a a DT cord-271701-tx0lqgff 69 33 3-h 3-h CD cord-271701-tx0lqgff 69 34 digestion digestion NN cord-271701-tx0lqgff 69 35 with with IN cord-271701-tx0lqgff 69 36 SARS SARS NNP cord-271701-tx0lqgff 69 37 - - HYPH cord-271701-tx0lqgff 69 38 CoV CoV NNP cord-271701-tx0lqgff 69 39 nsp5 nsp5 NN cord-271701-tx0lqgff 69 40 in in IN cord-271701-tx0lqgff 69 41 the the DT cord-271701-tx0lqgff 69 42 presence presence NN cord-271701-tx0lqgff 69 43 of of IN cord-271701-tx0lqgff 69 44 4 4 CD cord-271701-tx0lqgff 69 45 mM mm CD cord-271701-tx0lqgff 69 46 MgCl MgCl NNP cord-271701-tx0lqgff 69 47 2 2 CD cord-271701-tx0lqgff 69 48 . . . cord-271701-tx0lqgff 70 1 The the DT cord-271701-tx0lqgff 70 2 eluates eluate NNS cord-271701-tx0lqgff 70 3 were be VBD cord-271701-tx0lqgff 70 4 analysed analyse VBN cord-271701-tx0lqgff 70 5 by by IN cord-271701-tx0lqgff 70 6 sodium sodium NN cord-271701-tx0lqgff 70 7 dodecyl dodecyl NNP cord-271701-tx0lqgff 70 8 sulfate sulfate NN cord-271701-tx0lqgff 70 9 polyacrylamide polyacrylamide NN cord-271701-tx0lqgff 70 10 gel gel NN cord-271701-tx0lqgff 70 11 electrophoresis electrophoresis NN cord-271701-tx0lqgff 70 12 ( ( -LRB- cord-271701-tx0lqgff 70 13 SDS SDS NNP cord-271701-tx0lqgff 70 14 - - HYPH cord-271701-tx0lqgff 70 15 PAGE PAGE NNP cord-271701-tx0lqgff 70 16 ) ) -RRB- cord-271701-tx0lqgff 70 17 and and CC cord-271701-tx0lqgff 70 18 typically typically RB cord-271701-tx0lqgff 70 19 found find VBN cord-271701-tx0lqgff 70 20 to to TO cord-271701-tx0lqgff 70 21 be be VB cord-271701-tx0lqgff 70 22 > > $ cord-271701-tx0lqgff 70 23 90 90 CD cord-271701-tx0lqgff 70 24 % % NN cord-271701-tx0lqgff 70 25 pure pure JJ cord-271701-tx0lqgff 70 26 . . . cord-271701-tx0lqgff 71 1 Elution Elution NNP cord-271701-tx0lqgff 71 2 fractions fraction NNS cord-271701-tx0lqgff 71 3 containing contain VBG cord-271701-tx0lqgff 71 4 nsp8- nsp8- CD cord-271701-tx0lqgff 71 5 , , , cord-271701-tx0lqgff 71 6 nsp7 nsp7 NNP cord-271701-tx0lqgff 71 7 - - SYM cord-271701-tx0lqgff 71 8 8 8 CD cord-271701-tx0lqgff 71 9 or or CC cord-271701-tx0lqgff 71 10 nsp7 nsp7 NNPS cord-271701-tx0lqgff 71 11 were be VBD cord-271701-tx0lqgff 71 12 subsequently subsequently RB cord-271701-tx0lqgff 71 13 pooled pool VBN cord-271701-tx0lqgff 71 14 , , , cord-271701-tx0lqgff 71 15 dialysed dialysed JJ cord-271701-tx0lqgff 71 16 , , , cord-271701-tx0lqgff 71 17 stored store VBN cord-271701-tx0lqgff 71 18 and and CC cord-271701-tx0lqgff 71 19 analysed analyse VBN cord-271701-tx0lqgff 71 20 as as IN cord-271701-tx0lqgff 71 21 described describe VBN cord-271701-tx0lqgff 71 22 previously previously RB cord-271701-tx0lqgff 71 23 for for IN cord-271701-tx0lqgff 71 24 SARS SARS NNP cord-271701-tx0lqgff 71 25 - - HYPH cord-271701-tx0lqgff 71 26 CoV CoV NNP cord-271701-tx0lqgff 71 27 nsp12 nsp12 CD cord-271701-tx0lqgff 71 28 ( ( -LRB- cord-271701-tx0lqgff 71 29 10 10 CD cord-271701-tx0lqgff 71 30 ) ) -RRB- cord-271701-tx0lqgff 71 31 . . . cord-271701-tx0lqgff 72 1 To to TO cord-271701-tx0lqgff 72 2 study study VB cord-271701-tx0lqgff 72 3 SARS SARS NNP cord-271701-tx0lqgff 72 4 - - HYPH cord-271701-tx0lqgff 72 5 CoV CoV NNP cord-271701-tx0lqgff 72 6 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 72 7 + + SYM cord-271701-tx0lqgff 72 8 8 8 CD cord-271701-tx0lqgff 72 9 ) ) -RRB- cord-271701-tx0lqgff 73 1 complex complex JJ cord-271701-tx0lqgff 73 2 formation formation NN cord-271701-tx0lqgff 73 3 , , , cord-271701-tx0lqgff 73 4 different different JJ cord-271701-tx0lqgff 73 5 nsp8 nsp8 NN cord-271701-tx0lqgff 74 1 : : : cord-271701-tx0lqgff 74 2 nsp7 nsp7 JJ cord-271701-tx0lqgff 74 3 ratios ratio NNS cord-271701-tx0lqgff 74 4 were be VBD cord-271701-tx0lqgff 74 5 mixed mix VBN cord-271701-tx0lqgff 74 6 in in IN cord-271701-tx0lqgff 74 7 binding bind VBG cord-271701-tx0lqgff 74 8 buffer buffer NN cord-271701-tx0lqgff 74 9 ( ( -LRB- cord-271701-tx0lqgff 74 10 20 20 CD cord-271701-tx0lqgff 74 11 mM mm CD cord-271701-tx0lqgff 74 12 HEPES HEPES NNP cord-271701-tx0lqgff 74 13 pH ph NN cord-271701-tx0lqgff 74 14 7.5 7.5 CD cord-271701-tx0lqgff 74 15 , , , cord-271701-tx0lqgff 74 16 50 50 CD cord-271701-tx0lqgff 74 17 mM mm CD cord-271701-tx0lqgff 74 18 NaCl nacl NN cord-271701-tx0lqgff 74 19 , , , cord-271701-tx0lqgff 74 20 5 5 CD cord-271701-tx0lqgff 74 21 % % NN cord-271701-tx0lqgff 74 22 glycerol glycerol NN cord-271701-tx0lqgff 74 23 , , , cord-271701-tx0lqgff 74 24 0.1 0.1 CD cord-271701-tx0lqgff 74 25 % % NN cord-271701-tx0lqgff 74 26 Triton Triton NNP cord-271701-tx0lqgff 74 27 X-100 x-100 NN cord-271701-tx0lqgff 74 28 and and CC cord-271701-tx0lqgff 74 29 1 1 CD cord-271701-tx0lqgff 74 30 mM mm CD cord-271701-tx0lqgff 74 31 DTT DTT NNP cord-271701-tx0lqgff 74 32 ) ) -RRB- cord-271701-tx0lqgff 74 33 to to TO cord-271701-tx0lqgff 74 34 give give VB cord-271701-tx0lqgff 74 35 a a DT cord-271701-tx0lqgff 74 36 final final JJ cord-271701-tx0lqgff 74 37 reaction reaction NN cord-271701-tx0lqgff 74 38 volume volume NN cord-271701-tx0lqgff 74 39 of of IN cord-271701-tx0lqgff 74 40 10 10 CD cord-271701-tx0lqgff 74 41 ml ml NNS cord-271701-tx0lqgff 74 42 . . . cord-271701-tx0lqgff 75 1 The the DT cord-271701-tx0lqgff 75 2 proteins protein NNS cord-271701-tx0lqgff 75 3 were be VBD cord-271701-tx0lqgff 75 4 pre pre JJ cord-271701-tx0lqgff 75 5 - - JJ cord-271701-tx0lqgff 75 6 incubated incubate VBN cord-271701-tx0lqgff 75 7 for for IN cord-271701-tx0lqgff 75 8 10 10 CD cord-271701-tx0lqgff 75 9 min min NN cord-271701-tx0lqgff 75 10 at at IN cord-271701-tx0lqgff 75 11 20 20 CD cord-271701-tx0lqgff 75 12 C c NN cord-271701-tx0lqgff 75 13 , , , cord-271701-tx0lqgff 75 14 after after IN cord-271701-tx0lqgff 75 15 which which WDT cord-271701-tx0lqgff 75 16 cross cross NN cord-271701-tx0lqgff 75 17 - - NN cord-271701-tx0lqgff 75 18 linking linking NN cord-271701-tx0lqgff 75 19 was be VBD cord-271701-tx0lqgff 75 20 initiated initiate VBN cord-271701-tx0lqgff 75 21 through through IN cord-271701-tx0lqgff 75 22 the the DT cord-271701-tx0lqgff 75 23 addition addition NN cord-271701-tx0lqgff 75 24 of of IN cord-271701-tx0lqgff 75 25 0.5 0.5 CD cord-271701-tx0lqgff 75 26 ml ml NNS cord-271701-tx0lqgff 75 27 of of IN cord-271701-tx0lqgff 75 28 a a DT cord-271701-tx0lqgff 75 29 freshly freshly RB cord-271701-tx0lqgff 75 30 prepared prepare VBN cord-271701-tx0lqgff 75 31 2.5 2.5 CD cord-271701-tx0lqgff 75 32 % % NN cord-271701-tx0lqgff 75 33 glutaraldehyde glutaraldehyde NN cord-271701-tx0lqgff 75 34 solution solution NN cord-271701-tx0lqgff 75 35 . . . cord-271701-tx0lqgff 76 1 The the DT cord-271701-tx0lqgff 76 2 reactions reaction NNS cord-271701-tx0lqgff 76 3 were be VBD cord-271701-tx0lqgff 76 4 incubated incubate VBN cord-271701-tx0lqgff 76 5 for for IN cord-271701-tx0lqgff 76 6 a a DT cord-271701-tx0lqgff 76 7 further further JJ cord-271701-tx0lqgff 76 8 5 5 CD cord-271701-tx0lqgff 76 9 min min NN cord-271701-tx0lqgff 76 10 at at IN cord-271701-tx0lqgff 76 11 30 30 CD cord-271701-tx0lqgff 76 12 C c NN cord-271701-tx0lqgff 76 13 and and CC cord-271701-tx0lqgff 76 14 then then RB cord-271701-tx0lqgff 76 15 terminated terminate VBD cord-271701-tx0lqgff 76 16 with with IN cord-271701-tx0lqgff 76 17 1 1 CD cord-271701-tx0lqgff 76 18 ml ml NN cord-271701-tx0lqgff 76 19 1 1 CD cord-271701-tx0lqgff 76 20 M M NNP cord-271701-tx0lqgff 76 21 Tris Tris NNP cord-271701-tx0lqgff 76 22 pH ph NN cord-271701-tx0lqgff 76 23 8.0 8.0 CD cord-271701-tx0lqgff 76 24 . . . cord-271701-tx0lqgff 77 1 Analysis analysis NN cord-271701-tx0lqgff 77 2 of of IN cord-271701-tx0lqgff 77 3 complex complex JJ cord-271701-tx0lqgff 77 4 formation formation NN cord-271701-tx0lqgff 77 5 was be VBD cord-271701-tx0lqgff 77 6 performed perform VBN cord-271701-tx0lqgff 77 7 on on IN cord-271701-tx0lqgff 77 8 SDS SDS NNP cord-271701-tx0lqgff 77 9 - - HYPH cord-271701-tx0lqgff 77 10 PAGE PAGE NNP cord-271701-tx0lqgff 77 11 gels gel NNS cord-271701-tx0lqgff 77 12 , , , cord-271701-tx0lqgff 77 13 which which WDT cord-271701-tx0lqgff 77 14 were be VBD cord-271701-tx0lqgff 77 15 stained stain VBN cord-271701-tx0lqgff 77 16 with with IN cord-271701-tx0lqgff 77 17 Coomassie Coomassie NNP cord-271701-tx0lqgff 77 18 G-250 g-250 JJ cord-271701-tx0lqgff 77 19 dye dye NN cord-271701-tx0lqgff 77 20 . . . cord-271701-tx0lqgff 78 1 A a DT cord-271701-tx0lqgff 78 2 dilution dilution NN cord-271701-tx0lqgff 78 3 series series NN cord-271701-tx0lqgff 78 4 of of IN cord-271701-tx0lqgff 78 5 0 0 CD cord-271701-tx0lqgff 78 6 - - SYM cord-271701-tx0lqgff 78 7 5 5 CD cord-271701-tx0lqgff 78 8 mM mM NNP cord-271701-tx0lqgff 78 9 SARS SARS NNP cord-271701-tx0lqgff 78 10 - - HYPH cord-271701-tx0lqgff 78 11 CoV CoV NNP cord-271701-tx0lqgff 78 12 nsp8 nsp8 NN cord-271701-tx0lqgff 78 13 in in IN cord-271701-tx0lqgff 78 14 storage storage NN cord-271701-tx0lqgff 78 15 buffer buffer NN cord-271701-tx0lqgff 78 16 was be VBD cord-271701-tx0lqgff 78 17 incubated incubate VBN cord-271701-tx0lqgff 78 18 for for IN cord-271701-tx0lqgff 78 19 10 10 CD cord-271701-tx0lqgff 78 20 min min NN cord-271701-tx0lqgff 78 21 at at IN cord-271701-tx0lqgff 78 22 20 20 CD cord-271701-tx0lqgff 78 23 C c NN cord-271701-tx0lqgff 78 24 with with IN cord-271701-tx0lqgff 78 25 0.2 0.2 CD cord-271701-tx0lqgff 78 26 nM nm CD cord-271701-tx0lqgff 78 27 of of IN cord-271701-tx0lqgff 78 28 32 32 CD cord-271701-tx0lqgff 78 29 P p NN cord-271701-tx0lqgff 78 30 - - HYPH cord-271701-tx0lqgff 78 31 labelled label VBN cord-271701-tx0lqgff 78 32 duplex duplex NN cord-271701-tx0lqgff 78 33 RNA rna NN cord-271701-tx0lqgff 78 34 . . . cord-271701-tx0lqgff 79 1 Subsequently subsequently RB cord-271701-tx0lqgff 79 2 , , , cord-271701-tx0lqgff 79 3 samples sample NNS cord-271701-tx0lqgff 79 4 were be VBD cord-271701-tx0lqgff 79 5 directly directly RB cord-271701-tx0lqgff 79 6 loaded load VBN cord-271701-tx0lqgff 79 7 onto onto IN cord-271701-tx0lqgff 79 8 8 8 CD cord-271701-tx0lqgff 79 9 % % NN cord-271701-tx0lqgff 79 10 polyacrylamide polyacrylamide NN cord-271701-tx0lqgff 79 11 gels gel NNS cord-271701-tx0lqgff 79 12 containing contain VBG cord-271701-tx0lqgff 79 13 5 5 CD cord-271701-tx0lqgff 79 14 % % NN cord-271701-tx0lqgff 79 15 glycerol glycerol NN cord-271701-tx0lqgff 79 16 and and CC cord-271701-tx0lqgff 79 17 0.5x 0.5x CD cord-271701-tx0lqgff 79 18 TGE TGE NNP cord-271701-tx0lqgff 80 1 ( ( -LRB- cord-271701-tx0lqgff 80 2 25 25 CD cord-271701-tx0lqgff 80 3 mM mM NNP cord-271701-tx0lqgff 80 4 Tris Tris NNP cord-271701-tx0lqgff 80 5 , , , cord-271701-tx0lqgff 80 6 190 190 CD cord-271701-tx0lqgff 80 7 mM mm CD cord-271701-tx0lqgff 80 8 glycine glycine NN cord-271701-tx0lqgff 80 9 and and CC cord-271701-tx0lqgff 80 10 10 10 CD cord-271701-tx0lqgff 80 11 mM mm CD cord-271701-tx0lqgff 80 12 EDTA EDTA NNP cord-271701-tx0lqgff 80 13 ) ) -RRB- cord-271701-tx0lqgff 80 14 buffer buffer NN cord-271701-tx0lqgff 80 15 and and CC cord-271701-tx0lqgff 80 16 run run VB cord-271701-tx0lqgff 80 17 at at IN cord-271701-tx0lqgff 80 18 150 150 CD cord-271701-tx0lqgff 80 19 V v NN cord-271701-tx0lqgff 80 20 for for IN cord-271701-tx0lqgff 80 21 1 1 CD cord-271701-tx0lqgff 80 22 h h NN cord-271701-tx0lqgff 80 23 at at IN cord-271701-tx0lqgff 80 24 4 4 CD cord-271701-tx0lqgff 80 25 C. C. NNP cord-271701-tx0lqgff 80 26 Gels gel NNS cord-271701-tx0lqgff 80 27 were be VBD cord-271701-tx0lqgff 80 28 dried dry VBN cord-271701-tx0lqgff 80 29 on on IN cord-271701-tx0lqgff 80 30 Whatman Whatman NNP cord-271701-tx0lqgff 80 31 filter filter NN cord-271701-tx0lqgff 80 32 paper paper NN cord-271701-tx0lqgff 80 33 and and CC cord-271701-tx0lqgff 80 34 bands band NNS cord-271701-tx0lqgff 80 35 were be VBD cord-271701-tx0lqgff 80 36 quantified quantify VBN cord-271701-tx0lqgff 80 37 by by IN cord-271701-tx0lqgff 80 38 phosphorimaging phosphorimage VBG cord-271701-tx0lqgff 80 39 using use VBG cord-271701-tx0lqgff 80 40 a a DT cord-271701-tx0lqgff 80 41 Typhoon Typhoon NNP cord-271701-tx0lqgff 80 42 variable variable JJ cord-271701-tx0lqgff 80 43 mode mode NN cord-271701-tx0lqgff 80 44 scanner scanner NN cord-271701-tx0lqgff 80 45 ( ( -LRB- cord-271701-tx0lqgff 80 46 GE GE NNP cord-271701-tx0lqgff 80 47 Healthcare Healthcare NNP cord-271701-tx0lqgff 80 48 ) ) -RRB- cord-271701-tx0lqgff 80 49 and and CC cord-271701-tx0lqgff 80 50 ImageQuant ImageQuant NNP cord-271701-tx0lqgff 80 51 TL TL NNP cord-271701-tx0lqgff 80 52 7.0 7.0 CD cord-271701-tx0lqgff 80 53 software software NN cord-271701-tx0lqgff 80 54 ( ( -LRB- cord-271701-tx0lqgff 80 55 GE GE NNP cord-271701-tx0lqgff 80 56 Healthcare Healthcare NNP cord-271701-tx0lqgff 80 57 ) ) -RRB- cord-271701-tx0lqgff 80 58 as as IN cord-271701-tx0lqgff 80 59 described describe VBN cord-271701-tx0lqgff 80 60 elsewhere elsewhere RB cord-271701-tx0lqgff 80 61 ( ( -LRB- cord-271701-tx0lqgff 80 62 10 10 CD cord-271701-tx0lqgff 80 63 ) ) -RRB- cord-271701-tx0lqgff 80 64 . . . cord-271701-tx0lqgff 81 1 Using use VBG cord-271701-tx0lqgff 81 2 the the DT cord-271701-tx0lqgff 81 3 Matlab Matlab NNP cord-271701-tx0lqgff 81 4 2009a 2009a CD cord-271701-tx0lqgff 81 5 Curve Curve NNP cord-271701-tx0lqgff 81 6 Fitting Fitting NNP cord-271701-tx0lqgff 81 7 Toolbox Toolbox NNP cord-271701-tx0lqgff 81 8 , , , cord-271701-tx0lqgff 81 9 the the DT cord-271701-tx0lqgff 81 10 percentage percentage NN cord-271701-tx0lqgff 81 11 of of IN cord-271701-tx0lqgff 81 12 bound bind VBN cord-271701-tx0lqgff 81 13 RNA RNA NNP cord-271701-tx0lqgff 81 14 was be VBD cord-271701-tx0lqgff 81 15 fit fit JJ cord-271701-tx0lqgff 81 16 to to IN cord-271701-tx0lqgff 81 17 the the DT cord-271701-tx0lqgff 81 18 Hill Hill NNP cord-271701-tx0lqgff 81 19 equation equation NN cord-271701-tx0lqgff 81 20 , , , cord-271701-tx0lqgff 81 21 which which WDT cord-271701-tx0lqgff 81 22 is be VBZ cord-271701-tx0lqgff 81 23 defined define VBN cord-271701-tx0lqgff 81 24 as as IN cord-271701-tx0lqgff 81 25 : : : cord-271701-tx0lqgff 81 26 RNA RNA NNP cord-271701-tx0lqgff 81 27 bound bind VBD cord-271701-tx0lqgff 81 28 ¼ ¼ CD cord-271701-tx0lqgff 81 29 b b NN cord-271701-tx0lqgff 81 30 Á á NN cord-271701-tx0lqgff 81 31 ½nsp8 ½nsp8 NNP cord-271701-tx0lqgff 82 1 n n NN cord-271701-tx0lqgff 82 2 = = NN cord-271701-tx0lqgff 82 3 ðK ðk NN cord-271701-tx0lqgff 82 4 n n NN cord-271701-tx0lqgff 82 5 d d NN cord-271701-tx0lqgff 82 6 + + CC cord-271701-tx0lqgff 82 7 ½nsp8 ½nsp8 NN cord-271701-tx0lqgff 82 8 n n NN cord-271701-tx0lqgff 82 9 Þ. þ. NN cord-271701-tx0lqgff 83 1 Here here RB cord-271701-tx0lqgff 83 2 b b NN cord-271701-tx0lqgff 83 3 is be VBZ cord-271701-tx0lqgff 83 4 the the DT cord-271701-tx0lqgff 83 5 upper upper JJ cord-271701-tx0lqgff 83 6 binding binding NN cord-271701-tx0lqgff 83 7 limit limit NN cord-271701-tx0lqgff 83 8 , , , cord-271701-tx0lqgff 83 9 ½nsp8 ½nsp8 VB cord-271701-tx0lqgff 83 10 the the DT cord-271701-tx0lqgff 83 11 nsp8 nsp8 NNP cord-271701-tx0lqgff 83 12 concentration concentration NN cord-271701-tx0lqgff 83 13 , , , cord-271701-tx0lqgff 83 14 n n CC cord-271701-tx0lqgff 83 15 the the DT cord-271701-tx0lqgff 83 16 Hill Hill NNP cord-271701-tx0lqgff 83 17 coefficient coefficient NN cord-271701-tx0lqgff 83 18 and and CC cord-271701-tx0lqgff 83 19 K k NN cord-271701-tx0lqgff 83 20 d d XX cord-271701-tx0lqgff 83 21 the the DT cord-271701-tx0lqgff 83 22 dissociation dissociation NN cord-271701-tx0lqgff 83 23 constant constant JJ cord-271701-tx0lqgff 83 24 . . . cord-271701-tx0lqgff 84 1 The the DT cord-271701-tx0lqgff 84 2 oligoribonucleotide oligoribonucleotide JJ cord-271701-tx0lqgff 84 3 substrates substrate NNS cord-271701-tx0lqgff 84 4 used use VBN cord-271701-tx0lqgff 84 5 for for IN cord-271701-tx0lqgff 84 6 polymerase polymerase NN cord-271701-tx0lqgff 84 7 assays assay NNS cord-271701-tx0lqgff 84 8 are be VBP cord-271701-tx0lqgff 84 9 listed list VBN cord-271701-tx0lqgff 84 10 in in IN cord-271701-tx0lqgff 84 11 Table Table NNP cord-271701-tx0lqgff 84 12 1 1 CD cord-271701-tx0lqgff 84 13 and and CC cord-271701-tx0lqgff 84 14 were be VBD cord-271701-tx0lqgff 84 15 prepared prepare VBN cord-271701-tx0lqgff 84 16 as as IN cord-271701-tx0lqgff 84 17 described describe VBN cord-271701-tx0lqgff 84 18 previously previously RB cord-271701-tx0lqgff 84 19 ( ( -LRB- cord-271701-tx0lqgff 84 20 10 10 CD cord-271701-tx0lqgff 84 21 ) ) -RRB- cord-271701-tx0lqgff 84 22 . . . cord-271701-tx0lqgff 85 1 Primer primer NN cord-271701-tx0lqgff 85 2 - - HYPH cord-271701-tx0lqgff 85 3 extension extension NN cord-271701-tx0lqgff 85 4 assays assay NNS cord-271701-tx0lqgff 85 5 for for IN cord-271701-tx0lqgff 85 6 nsp8 nsp8 NN cord-271701-tx0lqgff 85 7 , , , cord-271701-tx0lqgff 85 8 the the DT cord-271701-tx0lqgff 85 9 nsp7 nsp7 JJ cord-271701-tx0lqgff 85 10 - - HYPH cord-271701-tx0lqgff 85 11 8 8 NNP cord-271701-tx0lqgff 85 12 polyprotein polyprotein NN cord-271701-tx0lqgff 85 13 , , , cord-271701-tx0lqgff 85 14 and and CC cord-271701-tx0lqgff 85 15 the the DT cord-271701-tx0lqgff 85 16 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 85 17 + + SYM cord-271701-tx0lqgff 85 18 8 8 CD cord-271701-tx0lqgff 85 19 ) ) -RRB- cord-271701-tx0lqgff 85 20 complex complex NN cord-271701-tx0lqgff 85 21 were be VBD cord-271701-tx0lqgff 85 22 essentially essentially RB cord-271701-tx0lqgff 85 23 performed perform VBN cord-271701-tx0lqgff 85 24 as as IN cord-271701-tx0lqgff 85 25 described describe VBN cord-271701-tx0lqgff 85 26 previously previously RB cord-271701-tx0lqgff 85 27 for for IN cord-271701-tx0lqgff 85 28 SARS SARS NNP cord-271701-tx0lqgff 85 29 - - HYPH cord-271701-tx0lqgff 85 30 CoV CoV NNP cord-271701-tx0lqgff 85 31 nsp12 nsp12 CD cord-271701-tx0lqgff 85 32 ( ( -LRB- cord-271701-tx0lqgff 85 33 10 10 CD cord-271701-tx0lqgff 85 34 , , , cord-271701-tx0lqgff 85 35 11 11 CD cord-271701-tx0lqgff 85 36 ) ) -RRB- cord-271701-tx0lqgff 85 37 . . . cord-271701-tx0lqgff 86 1 In in IN cord-271701-tx0lqgff 86 2 each each DT cord-271701-tx0lqgff 86 3 primer primer NN cord-271701-tx0lqgff 86 4 - - HYPH cord-271701-tx0lqgff 86 5 extension extension NN cord-271701-tx0lqgff 86 6 reaction reaction NN cord-271701-tx0lqgff 86 7 , , , cord-271701-tx0lqgff 86 8 typically typically RB cord-271701-tx0lqgff 86 9 1 1 CD cord-271701-tx0lqgff 86 10 mM mm CD cord-271701-tx0lqgff 86 11 wild wild JJ cord-271701-tx0lqgff 86 12 - - HYPH cord-271701-tx0lqgff 86 13 type type NN cord-271701-tx0lqgff 86 14 or or CC cord-271701-tx0lqgff 86 15 mutant mutant JJ cord-271701-tx0lqgff 86 16 nsp8 nsp8 NN cord-271701-tx0lqgff 86 17 was be VBD cord-271701-tx0lqgff 86 18 incubated incubate VBN cord-271701-tx0lqgff 86 19 with with IN cord-271701-tx0lqgff 86 20 4 4 CD cord-271701-tx0lqgff 86 21 mM mm CD cord-271701-tx0lqgff 86 22 MgCl MgCl NNP cord-271701-tx0lqgff 86 23 2 2 CD cord-271701-tx0lqgff 86 24 , , , cord-271701-tx0lqgff 86 25 50 50 CD cord-271701-tx0lqgff 86 26 mM mm CD cord-271701-tx0lqgff 86 27 GTP GTP NNP cord-271701-tx0lqgff 86 28 , , , cord-271701-tx0lqgff 86 29 50 50 CD cord-271701-tx0lqgff 86 30 mM mm CD cord-271701-tx0lqgff 86 31 ATP ATP NNP cord-271701-tx0lqgff 86 32 , , , cord-271701-tx0lqgff 86 33 0.17 0.17 CD cord-271701-tx0lqgff 86 34 mM mm CD cord-271701-tx0lqgff 86 35 [ [ -LRB- cord-271701-tx0lqgff 86 36 a-32 a-32 NNP cord-271701-tx0lqgff 86 37 P]ATP P]ATP NNP cord-271701-tx0lqgff 86 38 , , , cord-271701-tx0lqgff 86 39 1 1 CD cord-271701-tx0lqgff 86 40 mM mm CD cord-271701-tx0lqgff 86 41 DTT DTT NNP cord-271701-tx0lqgff 86 42 , , , cord-271701-tx0lqgff 86 43 0.1 0.1 CD cord-271701-tx0lqgff 86 44 % % NN cord-271701-tx0lqgff 86 45 Triton Triton NNP cord-271701-tx0lqgff 86 46 X-100 x-100 NN cord-271701-tx0lqgff 86 47 , , , cord-271701-tx0lqgff 86 48 10 10 CD cord-271701-tx0lqgff 86 49 mM mm CD cord-271701-tx0lqgff 86 50 KCl KCl NNS cord-271701-tx0lqgff 86 51 and and CC cord-271701-tx0lqgff 86 52 20 20 CD cord-271701-tx0lqgff 86 53 mM mM NNP cord-271701-tx0lqgff 86 54 Tris Tris NNP cord-271701-tx0lqgff 86 55 ( ( -LRB- cord-271701-tx0lqgff 86 56 pH pH NNP cord-271701-tx0lqgff 86 57 9.5 9.5 CD cord-271701-tx0lqgff 86 58 ) ) -RRB- cord-271701-tx0lqgff 86 59 . . . cord-271701-tx0lqgff 87 1 At at IN cord-271701-tx0lqgff 87 2 most most JJS cord-271701-tx0lqgff 87 3 , , , cord-271701-tx0lqgff 87 4 10 10 CD cord-271701-tx0lqgff 87 5 mM mm CD cord-271701-tx0lqgff 87 6 NaCl nacl NN cord-271701-tx0lqgff 87 7 and and CC cord-271701-tx0lqgff 87 8 5 5 CD cord-271701-tx0lqgff 87 9 % % NN cord-271701-tx0lqgff 87 10 glycerol glycerol NN cord-271701-tx0lqgff 87 11 were be VBD cord-271701-tx0lqgff 87 12 introduced introduce VBN cord-271701-tx0lqgff 87 13 with with IN cord-271701-tx0lqgff 87 14 the the DT cord-271701-tx0lqgff 87 15 nsp8 nsp8 JJ cord-271701-tx0lqgff 87 16 storage storage NN cord-271701-tx0lqgff 87 17 buffer buffer NN cord-271701-tx0lqgff 87 18 . . . cord-271701-tx0lqgff 88 1 Gels gel NNS cord-271701-tx0lqgff 88 2 were be VBD cord-271701-tx0lqgff 88 3 run run VBN cord-271701-tx0lqgff 88 4 and and CC cord-271701-tx0lqgff 88 5 analysed analyse VBN cord-271701-tx0lqgff 88 6 as as IN cord-271701-tx0lqgff 88 7 described describe VBN cord-271701-tx0lqgff 88 8 previously previously RB cord-271701-tx0lqgff 88 9 ( ( -LRB- cord-271701-tx0lqgff 88 10 10 10 CD cord-271701-tx0lqgff 88 11 ) ) -RRB- cord-271701-tx0lqgff 88 12 . . . cord-271701-tx0lqgff 89 1 To to TO cord-271701-tx0lqgff 89 2 convert convert VB cord-271701-tx0lqgff 89 3 the the DT cord-271701-tx0lqgff 89 4 phosphorimager phosphorimager NN cord-271701-tx0lqgff 89 5 signal signal NN cord-271701-tx0lqgff 89 6 into into IN cord-271701-tx0lqgff 89 7 the the DT cord-271701-tx0lqgff 89 8 amount amount NN cord-271701-tx0lqgff 89 9 of of IN cord-271701-tx0lqgff 89 10 [ [ -LRB- cord-271701-tx0lqgff 89 11 a-32 a-32 NNP cord-271701-tx0lqgff 89 12 P]AMP P]AMP NNP cord-271701-tx0lqgff 89 13 incorporated incorporate VBD cord-271701-tx0lqgff 89 14 , , , cord-271701-tx0lqgff 89 15 a a DT cord-271701-tx0lqgff 89 16 10 10 CD cord-271701-tx0lqgff 89 17 À2 à2 NN cord-271701-tx0lqgff 89 18 to to IN cord-271701-tx0lqgff 89 19 10 10 CD cord-271701-tx0lqgff 89 20 À5 À5 NNP cord-271701-tx0lqgff 89 21 dilution dilution NN cord-271701-tx0lqgff 89 22 series series NN cord-271701-tx0lqgff 89 23 of of IN cord-271701-tx0lqgff 89 24 the the DT cord-271701-tx0lqgff 89 25 [ [ -LRB- cord-271701-tx0lqgff 89 26 a-32 a-32 NNP cord-271701-tx0lqgff 89 27 P]ATP P]ATP NNP cord-271701-tx0lqgff 89 28 stock stock NN cord-271701-tx0lqgff 89 29 was be VBD cord-271701-tx0lqgff 89 30 spotted spot VBN cord-271701-tx0lqgff 89 31 in in IN cord-271701-tx0lqgff 89 32 triplicate triplicate NN cord-271701-tx0lqgff 89 33 on on IN cord-271701-tx0lqgff 89 34 Whatman Whatman NNP cord-271701-tx0lqgff 89 35 filter filter NN cord-271701-tx0lqgff 89 36 paper paper NN cord-271701-tx0lqgff 89 37 and and CC cord-271701-tx0lqgff 89 38 exposed expose VBN cord-271701-tx0lqgff 89 39 alongside alongside IN cord-271701-tx0lqgff 89 40 the the DT cord-271701-tx0lqgff 89 41 PAGE page NN cord-271701-tx0lqgff 89 42 gel gel NN cord-271701-tx0lqgff 89 43 . . . cord-271701-tx0lqgff 90 1 The the DT cord-271701-tx0lqgff 90 2 amount amount NN cord-271701-tx0lqgff 90 3 of of IN cord-271701-tx0lqgff 90 4 incorporated incorporated JJ cord-271701-tx0lqgff 90 5 label label NN cord-271701-tx0lqgff 90 6 was be VBD cord-271701-tx0lqgff 90 7 ultimately ultimately RB cord-271701-tx0lqgff 90 8 corrected correct VBN cord-271701-tx0lqgff 90 9 for for IN cord-271701-tx0lqgff 90 10 the the DT cord-271701-tx0lqgff 90 11 concentration concentration NN cord-271701-tx0lqgff 90 12 of of IN cord-271701-tx0lqgff 90 13 competing compete VBG cord-271701-tx0lqgff 90 14 , , , cord-271701-tx0lqgff 90 15 unlabelled unlabelled JJ cord-271701-tx0lqgff 90 16 nucleotides nucleotide NNS cord-271701-tx0lqgff 90 17 present present JJ cord-271701-tx0lqgff 90 18 in in IN cord-271701-tx0lqgff 90 19 the the DT cord-271701-tx0lqgff 90 20 reaction reaction NN cord-271701-tx0lqgff 90 21 mixture mixture NN cord-271701-tx0lqgff 90 22 . . . cord-271701-tx0lqgff 91 1 De De NNP cord-271701-tx0lqgff 91 2 novo novo NNP cord-271701-tx0lqgff 91 3 initiation initiation NN cord-271701-tx0lqgff 91 4 assays assay NNS cord-271701-tx0lqgff 91 5 were be VBD cord-271701-tx0lqgff 91 6 essentially essentially RB cord-271701-tx0lqgff 91 7 performed perform VBN cord-271701-tx0lqgff 91 8 as as IN cord-271701-tx0lqgff 91 9 described describe VBN cord-271701-tx0lqgff 91 10 by by IN cord-271701-tx0lqgff 91 11 Imbert Imbert NNP cord-271701-tx0lqgff 91 12 et et NNP cord-271701-tx0lqgff 91 13 al al NNP cord-271701-tx0lqgff 91 14 . . . cord-271701-tx0lqgff 92 1 ( ( -LRB- cord-271701-tx0lqgff 92 2 12 12 CD cord-271701-tx0lqgff 92 3 ) ) -RRB- cord-271701-tx0lqgff 92 4 , , , cord-271701-tx0lqgff 92 5 with with IN cord-271701-tx0lqgff 92 6 small small JJ cord-271701-tx0lqgff 92 7 modifications modification NNS cord-271701-tx0lqgff 92 8 for for IN cord-271701-tx0lqgff 92 9 optimisation optimisation NN cord-271701-tx0lqgff 92 10 . . . cord-271701-tx0lqgff 93 1 Briefly briefly RB cord-271701-tx0lqgff 93 2 , , , cord-271701-tx0lqgff 93 3 1 1 CD cord-271701-tx0lqgff 93 4 mM mm CD cord-271701-tx0lqgff 93 5 wild wild JJ cord-271701-tx0lqgff 93 6 - - HYPH cord-271701-tx0lqgff 93 7 type type NN cord-271701-tx0lqgff 93 8 or or CC cord-271701-tx0lqgff 93 9 mutant mutant JJ cord-271701-tx0lqgff 93 10 nsp8 nsp8 NN cord-271701-tx0lqgff 93 11 was be VBD cord-271701-tx0lqgff 93 12 incubated incubate VBN cord-271701-tx0lqgff 93 13 with with IN cord-271701-tx0lqgff 93 14 4 4 CD cord-271701-tx0lqgff 93 15 mM mm CD cord-271701-tx0lqgff 93 16 MgCl MgCl NNP cord-271701-tx0lqgff 93 17 2 2 CD cord-271701-tx0lqgff 93 18 , , , cord-271701-tx0lqgff 93 19 1 1 CD cord-271701-tx0lqgff 93 20 mM mm CD cord-271701-tx0lqgff 93 21 MnCl MnCl NNP cord-271701-tx0lqgff 93 22 2 2 CD cord-271701-tx0lqgff 93 23 , , , cord-271701-tx0lqgff 94 1 1 1 LS cord-271701-tx0lqgff 94 2 mM mm CD cord-271701-tx0lqgff 94 3 GTP GTP NNP cord-271701-tx0lqgff 94 4 , , , cord-271701-tx0lqgff 94 5 5 5 CD cord-271701-tx0lqgff 94 6 mM mm CD cord-271701-tx0lqgff 94 7 ATP ATP NNP cord-271701-tx0lqgff 94 8 , , , cord-271701-tx0lqgff 94 9 0.17 0.17 CD cord-271701-tx0lqgff 94 10 mM mm CD cord-271701-tx0lqgff 94 11 [ [ -LRB- cord-271701-tx0lqgff 94 12 a-32 a-32 NNP cord-271701-tx0lqgff 94 13 P]ATP P]ATP NNP cord-271701-tx0lqgff 94 14 and and CC cord-271701-tx0lqgff 94 15 1 1 CD cord-271701-tx0lqgff 94 16 mM mm CD cord-271701-tx0lqgff 94 17 of of IN cord-271701-tx0lqgff 94 18 oligo oligo NN cord-271701-tx0lqgff 94 19 AFMB131 AFMB131 NNP cord-271701-tx0lqgff 94 20 . . . cord-271701-tx0lqgff 95 1 Alignments alignment NNS cord-271701-tx0lqgff 95 2 of of IN cord-271701-tx0lqgff 95 3 nsp8 nsp8 JJ cord-271701-tx0lqgff 95 4 sequences sequence NNS cord-271701-tx0lqgff 95 5 were be VBD cord-271701-tx0lqgff 95 6 made make VBN cord-271701-tx0lqgff 95 7 using use VBG cord-271701-tx0lqgff 95 8 Muscle Muscle NNP cord-271701-tx0lqgff 95 9 ( ( -LRB- cord-271701-tx0lqgff 95 10 16 16 CD cord-271701-tx0lqgff 95 11 ) ) -RRB- cord-271701-tx0lqgff 95 12 . . . cord-271701-tx0lqgff 96 1 Sequences sequence NNS cord-271701-tx0lqgff 96 2 used use VBD cord-271701-tx0lqgff 96 3 included include VBD cord-271701-tx0lqgff 96 4 the the DT cord-271701-tx0lqgff 96 5 alphacoronaviruses alphacoronaviruses NNP cord-271701-tx0lqgff 96 6 human human NNP cord-271701-tx0lqgff 96 7 CoV CoV NNP cord-271701-tx0lqgff 96 8 229E 229e CD cord-271701-tx0lqgff 97 1 ( ( -LRB- cord-271701-tx0lqgff 97 2 NC_002645 NC_002645 NNP cord-271701-tx0lqgff 97 3 ) ) -RRB- cord-271701-tx0lqgff 97 4 , , , cord-271701-tx0lqgff 97 5 human human JJ cord-271701-tx0lqgff 97 6 CoV cov NN cord-271701-tx0lqgff 98 1 NL63 NL63 NNP cord-271701-tx0lqgff 98 2 ( ( -LRB- cord-271701-tx0lqgff 98 3 NC_005831 NC_005831 NNP cord-271701-tx0lqgff 98 4 ) ) -RRB- cord-271701-tx0lqgff 98 5 , , , cord-271701-tx0lqgff 98 6 and and CC cord-271701-tx0lqgff 98 7 bat bat NN cord-271701-tx0lqgff 98 8 CoV cov NN cord-271701-tx0lqgff 98 9 HKU8 HKU8 NNP cord-271701-tx0lqgff 98 10 ( ( -LRB- cord-271701-tx0lqgff 98 11 NC_010438 NC_010438 NNP cord-271701-tx0lqgff 98 12 ) ) -RRB- cord-271701-tx0lqgff 98 13 ; ; : cord-271701-tx0lqgff 98 14 the the DT cord-271701-tx0lqgff 98 15 betacoronaviruses betacoronaviruses NNP cord-271701-tx0lqgff 98 16 SARS SARS NNP cord-271701-tx0lqgff 98 17 - - HYPH cord-271701-tx0lqgff 98 18 CoV CoV NNP cord-271701-tx0lqgff 98 19 Frankfurt-1 Frankfurt-1 NNP cord-271701-tx0lqgff 98 20 ( ( -LRB- cord-271701-tx0lqgff 98 21 AY291315 AY291315 NNP cord-271701-tx0lqgff 98 22 ) ) -RRB- cord-271701-tx0lqgff 98 23 , , , cord-271701-tx0lqgff 98 24 mouse mouse NN cord-271701-tx0lqgff 98 25 hepatitis hepatitis NN cord-271701-tx0lqgff 98 26 virus virus NN cord-271701-tx0lqgff 98 27 A59 A59 NNP cord-271701-tx0lqgff 98 28 ( ( -LRB- cord-271701-tx0lqgff 98 29 MHV MHV NNP cord-271701-tx0lqgff 98 30 , , , cord-271701-tx0lqgff 98 31 NC_001849 NC_001849 NNP cord-271701-tx0lqgff 98 32 ) ) -RRB- cord-271701-tx0lqgff 98 33 and and CC cord-271701-tx0lqgff 98 34 human human JJ cord-271701-tx0lqgff 98 35 CoV cov NN cord-271701-tx0lqgff 98 36 OC43 OC43 NNP cord-271701-tx0lqgff 98 37 ( ( -LRB- cord-271701-tx0lqgff 98 38 NC_005147 NC_005147 NNP cord-271701-tx0lqgff 98 39 ) ) -RRB- cord-271701-tx0lqgff 98 40 ; ; : cord-271701-tx0lqgff 98 41 and and CC cord-271701-tx0lqgff 98 42 the the DT cord-271701-tx0lqgff 98 43 gammacoronaviruses gammacoronaviruses NNP cord-271701-tx0lqgff 98 44 beluga beluga NNP cord-271701-tx0lqgff 98 45 whale whale NNP cord-271701-tx0lqgff 98 46 CoV CoV NNP cord-271701-tx0lqgff 98 47 SW1 SW1 NNP cord-271701-tx0lqgff 98 48 ( ( -LRB- cord-271701-tx0lqgff 98 49 NC010646 NC010646 NNP cord-271701-tx0lqgff 98 50 ) ) -RRB- cord-271701-tx0lqgff 98 51 , , , cord-271701-tx0lqgff 98 52 turkey turkey NNP cord-271701-tx0lqgff 98 53 CoV CoV NNP cord-271701-tx0lqgff 98 54 ( ( -LRB- cord-271701-tx0lqgff 98 55 NC_010800 NC_010800 NNP cord-271701-tx0lqgff 98 56 ) ) -RRB- cord-271701-tx0lqgff 98 57 and and CC cord-271701-tx0lqgff 98 58 avian avian JJ cord-271701-tx0lqgff 98 59 infectious infectious JJ cord-271701-tx0lqgff 98 60 bronchitis bronchitis NN cord-271701-tx0lqgff 98 61 virus virus NN cord-271701-tx0lqgff 98 62 ( ( -LRB- cord-271701-tx0lqgff 98 63 IBV IBV NNP cord-271701-tx0lqgff 98 64 , , , cord-271701-tx0lqgff 98 65 AJ311317 AJ311317 NNP cord-271701-tx0lqgff 98 66 ) ) -RRB- cord-271701-tx0lqgff 98 67 . . . cord-271701-tx0lqgff 99 1 N n CD cord-271701-tx0lqgff 99 2 - - HYPH cord-271701-tx0lqgff 99 3 terminal terminal NN cord-271701-tx0lqgff 99 4 processing processing NN cord-271701-tx0lqgff 99 5 defines define VBZ cord-271701-tx0lqgff 99 6 nsp8 nsp8 JJ cord-271701-tx0lqgff 99 7 multimerization multimerization NN cord-271701-tx0lqgff 99 8 and and CC cord-271701-tx0lqgff 99 9 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 99 10 + + SYM cord-271701-tx0lqgff 99 11 8 8 CD cord-271701-tx0lqgff 99 12 ) ) -RRB- cord-271701-tx0lqgff 100 1 complex complex JJ cord-271701-tx0lqgff 100 2 formation formation NN cord-271701-tx0lqgff 100 3 SARS SARS NNP cord-271701-tx0lqgff 100 4 - - HYPH cord-271701-tx0lqgff 100 5 CoV CoV NNP cord-271701-tx0lqgff 100 6 nsp7 nsp7 NN cord-271701-tx0lqgff 100 7 and and CC cord-271701-tx0lqgff 100 8 nsp8 nsp8 NN cord-271701-tx0lqgff 100 9 were be VBD cord-271701-tx0lqgff 100 10 previously previously RB cord-271701-tx0lqgff 100 11 reported report VBN cord-271701-tx0lqgff 100 12 to to TO cord-271701-tx0lqgff 100 13 interact interact VB cord-271701-tx0lqgff 100 14 and and CC cord-271701-tx0lqgff 100 15 form form VB cord-271701-tx0lqgff 100 16 a a DT cord-271701-tx0lqgff 100 17 hollow hollow JJ cord-271701-tx0lqgff 100 18 ring ring NN cord-271701-tx0lqgff 100 19 structure structure NN cord-271701-tx0lqgff 100 20 that that WDT cord-271701-tx0lqgff 100 21 is be VBZ cord-271701-tx0lqgff 100 22 composed compose VBN cord-271701-tx0lqgff 100 23 of of IN cord-271701-tx0lqgff 100 24 an an DT cord-271701-tx0lqgff 100 25 intricate intricate JJ cord-271701-tx0lqgff 100 26 nsp8 nsp8 JJ cord-271701-tx0lqgff 100 27 octamer octamer NN cord-271701-tx0lqgff 100 28 supported support VBN cord-271701-tx0lqgff 100 29 by by IN cord-271701-tx0lqgff 100 30 _SP cord-271701-tx0lqgff 100 31 eight eight CD cord-271701-tx0lqgff 100 32 copies copy NNS cord-271701-tx0lqgff 100 33 of of IN cord-271701-tx0lqgff 100 34 nsp7 nsp7 JJ cord-271701-tx0lqgff 100 35 ( ( -LRB- cord-271701-tx0lqgff 100 36 13,17 13,17 CD cord-271701-tx0lqgff 100 37 ) ) -RRB- cord-271701-tx0lqgff 101 1 ( ( -LRB- cord-271701-tx0lqgff 101 2 Figure figure NN cord-271701-tx0lqgff 101 3 1B 1b CD cord-271701-tx0lqgff 101 4 ) ) -RRB- cord-271701-tx0lqgff 101 5 . . . cord-271701-tx0lqgff 102 1 Based base VBN cord-271701-tx0lqgff 102 2 on on IN cord-271701-tx0lqgff 102 3 the the DT cord-271701-tx0lqgff 102 4 large large JJ cord-271701-tx0lqgff 102 5 diameter diameter NN cord-271701-tx0lqgff 102 6 , , , cord-271701-tx0lqgff 102 7 positive positive JJ cord-271701-tx0lqgff 102 8 charge charge NN cord-271701-tx0lqgff 102 9 of of IN cord-271701-tx0lqgff 102 10 the the DT cord-271701-tx0lqgff 102 11 hexadecamer hexadecamer NN cord-271701-tx0lqgff 102 12 's 's POS cord-271701-tx0lqgff 102 13 channel channel NN cord-271701-tx0lqgff 102 14 and and CC cord-271701-tx0lqgff 102 15 in in IN cord-271701-tx0lqgff 102 16 silico silico NN cord-271701-tx0lqgff 102 17 docking docking NN cord-271701-tx0lqgff 102 18 , , , cord-271701-tx0lqgff 102 19 it -PRON- PRP cord-271701-tx0lqgff 102 20 was be VBD cord-271701-tx0lqgff 102 21 proposed propose VBN cord-271701-tx0lqgff 102 22 to to TO cord-271701-tx0lqgff 102 23 be be VB cord-271701-tx0lqgff 102 24 able able JJ cord-271701-tx0lqgff 102 25 to to TO cord-271701-tx0lqgff 102 26 encircle encircle VB cord-271701-tx0lqgff 102 27 dsRNA dsrna JJ cord-271701-tx0lqgff 103 1 ( ( -LRB- cord-271701-tx0lqgff 103 2 Figure figure NN cord-271701-tx0lqgff 103 3 1B 1b CD cord-271701-tx0lqgff 103 4 ) ) -RRB- cord-271701-tx0lqgff 103 5 . . . cord-271701-tx0lqgff 104 1 However however RB cord-271701-tx0lqgff 104 2 , , , cord-271701-tx0lqgff 104 3 the the DT cord-271701-tx0lqgff 104 4 functional functional JJ cord-271701-tx0lqgff 104 5 significance significance NN cord-271701-tx0lqgff 104 6 of of IN cord-271701-tx0lqgff 104 7 the the DT cord-271701-tx0lqgff 104 8 compound compound NN cord-271701-tx0lqgff 104 9 interactions interaction NNS cord-271701-tx0lqgff 104 10 between between IN cord-271701-tx0lqgff 104 11 nsp7 nsp7 NN cord-271701-tx0lqgff 104 12 and and CC cord-271701-tx0lqgff 104 13 nsp8 nsp8 NN cord-271701-tx0lqgff 104 14 is be VBZ cord-271701-tx0lqgff 104 15 poorly poorly RB cord-271701-tx0lqgff 104 16 understood understand VBN cord-271701-tx0lqgff 104 17 , , , cord-271701-tx0lqgff 104 18 as as IN cord-271701-tx0lqgff 104 19 are be VBP cord-271701-tx0lqgff 104 20 the the DT cord-271701-tx0lqgff 104 21 polymerase polymerase NN cord-271701-tx0lqgff 104 22 activities activity NNS cord-271701-tx0lqgff 104 23 associated associate VBN cord-271701-tx0lqgff 104 24 with with IN cord-271701-tx0lqgff 104 25 monomeric monomeric JJ cord-271701-tx0lqgff 104 26 nsp8 nsp8 NN cord-271701-tx0lqgff 104 27 or or CC cord-271701-tx0lqgff 104 28 nsp8-containing nsp8-containing NNP cord-271701-tx0lqgff 104 29 multimers multimer NNS cord-271701-tx0lqgff 104 30 . . . cord-271701-tx0lqgff 105 1 So so RB cord-271701-tx0lqgff 105 2 far far RB cord-271701-tx0lqgff 105 3 , , , cord-271701-tx0lqgff 105 4 strategies strategy NNS cord-271701-tx0lqgff 105 5 for for IN cord-271701-tx0lqgff 105 6 the the DT cord-271701-tx0lqgff 105 7 purification purification NN cord-271701-tx0lqgff 105 8 of of IN cord-271701-tx0lqgff 105 9 recombinant recombinant JJ cord-271701-tx0lqgff 105 10 nsp8 nsp8 NNP cord-271701-tx0lqgff 105 11 have have VBP cord-271701-tx0lqgff 105 12 involved involve VBN cord-271701-tx0lqgff 105 13 the the DT cord-271701-tx0lqgff 105 14 use use NN cord-271701-tx0lqgff 105 15 of of IN cord-271701-tx0lqgff 105 16 affinity affinity NN cord-271701-tx0lqgff 105 17 tags tag NNS cord-271701-tx0lqgff 105 18 [ [ -LRB- cord-271701-tx0lqgff 105 19 e.g. e.g. PDT cord-271701-tx0lqgff 105 20 His -PRON- PRP$ cord-271701-tx0lqgff 105 21 6 6 CD cord-271701-tx0lqgff 105 22 or or CC cord-271701-tx0lqgff 105 23 glutathione glutathione NN cord-271701-tx0lqgff 105 24 - - HYPH cord-271701-tx0lqgff 105 25 S s NN cord-271701-tx0lqgff 105 26 - - HYPH cord-271701-tx0lqgff 105 27 transferase transferase NN cord-271701-tx0lqgff 105 28 ( ( -LRB- cord-271701-tx0lqgff 105 29 GST GST NNP cord-271701-tx0lqgff 105 30 ) ) -RRB- cord-271701-tx0lqgff 105 31 ( ( -LRB- cord-271701-tx0lqgff 105 32 12 12 CD cord-271701-tx0lqgff 105 33 , , , cord-271701-tx0lqgff 105 34 13 13 CD cord-271701-tx0lqgff 105 35 ) ) -RRB- cord-271701-tx0lqgff 105 36 ] ] -RRB- cord-271701-tx0lqgff 105 37 that that WDT cord-271701-tx0lqgff 105 38 were be VBD cord-271701-tx0lqgff 105 39 fused fuse VBN cord-271701-tx0lqgff 105 40 to to IN cord-271701-tx0lqgff 105 41 one one CD cord-271701-tx0lqgff 105 42 terminus terminus NN cord-271701-tx0lqgff 105 43 to to TO cord-271701-tx0lqgff 105 44 facilitate facilitate VB cord-271701-tx0lqgff 105 45 protein protein NN cord-271701-tx0lqgff 105 46 recovery recovery NN cord-271701-tx0lqgff 105 47 . . . cord-271701-tx0lqgff 106 1 Inadvertently inadvertently RB cord-271701-tx0lqgff 106 2 though though RB cord-271701-tx0lqgff 106 3 , , , cord-271701-tx0lqgff 106 4 such such JJ cord-271701-tx0lqgff 106 5 tags tag NNS cord-271701-tx0lqgff 106 6 or or CC cord-271701-tx0lqgff 106 7 other other JJ cord-271701-tx0lqgff 106 8 exogenous exogenous JJ cord-271701-tx0lqgff 106 9 sequences sequence NNS cord-271701-tx0lqgff 106 10 may may MD cord-271701-tx0lqgff 106 11 significantly significantly RB cord-271701-tx0lqgff 106 12 impede impede VB cord-271701-tx0lqgff 106 13 the the DT cord-271701-tx0lqgff 106 14 correct correct JJ cord-271701-tx0lqgff 106 15 folding folding NN cord-271701-tx0lqgff 106 16 of of IN cord-271701-tx0lqgff 106 17 enzymes enzyme NNS cord-271701-tx0lqgff 106 18 and and CC cord-271701-tx0lqgff 106 19 thus thus RB cord-271701-tx0lqgff 106 20 alter alter VB cord-271701-tx0lqgff 106 21 their -PRON- PRP$ cord-271701-tx0lqgff 106 22 stability stability NN cord-271701-tx0lqgff 106 23 or or CC cord-271701-tx0lqgff 106 24 activity activity NN cord-271701-tx0lqgff 106 25 , , , cord-271701-tx0lqgff 106 26 as as IN cord-271701-tx0lqgff 106 27 exemplified exemplify VBN cord-271701-tx0lqgff 106 28 by by IN cord-271701-tx0lqgff 106 29 studies study NNS cord-271701-tx0lqgff 106 30 of of IN cord-271701-tx0lqgff 106 31 the the DT cord-271701-tx0lqgff 106 32 poliovirus poliovirus NN cord-271701-tx0lqgff 106 33 ( ( -LRB- cord-271701-tx0lqgff 106 34 3D 3D NNP cord-271701-tx0lqgff 106 35 pol pol NNP cord-271701-tx0lqgff 106 36 ) ) -RRB- cord-271701-tx0lqgff 106 37 and and CC cord-271701-tx0lqgff 106 38 SARS SARS NNP cord-271701-tx0lqgff 106 39 - - HYPH cord-271701-tx0lqgff 106 40 CoV CoV NNP cord-271701-tx0lqgff 106 41 ( ( -LRB- cord-271701-tx0lqgff 106 42 nsp12 nsp12 CD cord-271701-tx0lqgff 106 43 ) ) -RRB- cord-271701-tx0lqgff 106 44 RdRp RdRp NNP cord-271701-tx0lqgff 106 45 subunits subunit NNS cord-271701-tx0lqgff 106 46 ( ( -LRB- cord-271701-tx0lqgff 106 47 10 10 CD cord-271701-tx0lqgff 106 48 , , , cord-271701-tx0lqgff 106 49 14 14 CD cord-271701-tx0lqgff 106 50 , , , cord-271701-tx0lqgff 106 51 18 18 CD cord-271701-tx0lqgff 106 52 ) ) -RRB- cord-271701-tx0lqgff 106 53 . . . cord-271701-tx0lqgff 107 1 To to TO cord-271701-tx0lqgff 107 2 circumvent circumvent VB cord-271701-tx0lqgff 107 3 this this DT cord-271701-tx0lqgff 107 4 issue issue NN cord-271701-tx0lqgff 107 5 , , , cord-271701-tx0lqgff 107 6 we -PRON- PRP cord-271701-tx0lqgff 107 7 developed develop VBD cord-271701-tx0lqgff 107 8 a a DT cord-271701-tx0lqgff 107 9 protocol protocol NN cord-271701-tx0lqgff 107 10 in in IN cord-271701-tx0lqgff 107 11 which which WDT cord-271701-tx0lqgff 107 12 SARS SARS NNP cord-271701-tx0lqgff 107 13 - - HYPH cord-271701-tx0lqgff 107 14 CoV CoV NNP cord-271701-tx0lqgff 107 15 nsp8 nsp8 NN cord-271701-tx0lqgff 107 16 was be VBD cord-271701-tx0lqgff 107 17 expressed express VBN cord-271701-tx0lqgff 107 18 as as IN cord-271701-tx0lqgff 107 19 a a DT cord-271701-tx0lqgff 107 20 ubiquitin ubiquitin NN cord-271701-tx0lqgff 107 21 ( ( -LRB- cord-271701-tx0lqgff 107 22 ub ub NNP cord-271701-tx0lqgff 107 23 ) ) -RRB- cord-271701-tx0lqgff 107 24 fusion fusion NN cord-271701-tx0lqgff 107 25 protein protein NN cord-271701-tx0lqgff 107 26 carrying carry VBG cord-271701-tx0lqgff 107 27 a a DT cord-271701-tx0lqgff 107 28 C c NN cord-271701-tx0lqgff 107 29 - - HYPH cord-271701-tx0lqgff 107 30 terminal terminal NN cord-271701-tx0lqgff 108 1 His -PRON- PRP$ cord-271701-tx0lqgff 108 2 6 6 CD cord-271701-tx0lqgff 108 3 -tag -tag : cord-271701-tx0lqgff 108 4 ( ( -LRB- cord-271701-tx0lqgff 108 5 ub ub NNP cord-271701-tx0lqgff 108 6 - - HYPH cord-271701-tx0lqgff 108 7 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 108 8 ) ) -RRB- cord-271701-tx0lqgff 108 9 , , , cord-271701-tx0lqgff 108 10 which which WDT cord-271701-tx0lqgff 108 11 was be VBD cord-271701-tx0lqgff 108 12 subsequently subsequently RB cord-271701-tx0lqgff 108 13 processed process VBN cord-271701-tx0lqgff 108 14 at at IN cord-271701-tx0lqgff 108 15 both both DT cord-271701-tx0lqgff 108 16 termini terminus NNS cord-271701-tx0lqgff 108 17 in in IN cord-271701-tx0lqgff 108 18 two two CD cord-271701-tx0lqgff 108 19 steps step NNS cord-271701-tx0lqgff 108 20 . . . cord-271701-tx0lqgff 109 1 The the DT cord-271701-tx0lqgff 109 2 first first JJ cord-271701-tx0lqgff 109 3 step step NN cord-271701-tx0lqgff 109 4 was be VBD cord-271701-tx0lqgff 109 5 co co JJ cord-271701-tx0lqgff 109 6 - - JJ cord-271701-tx0lqgff 109 7 translational translational JJ cord-271701-tx0lqgff 109 8 and and CC cord-271701-tx0lqgff 109 9 involved involve VBD cord-271701-tx0lqgff 109 10 the the DT cord-271701-tx0lqgff 109 11 release release NN cord-271701-tx0lqgff 109 12 of of IN cord-271701-tx0lqgff 109 13 the the DT cord-271701-tx0lqgff 109 14 N n CD cord-271701-tx0lqgff 109 15 - - HYPH cord-271701-tx0lqgff 109 16 terminal terminal NNP cord-271701-tx0lqgff 109 17 ub ub NNP cord-271701-tx0lqgff 109 18 fusion fusion NN cord-271701-tx0lqgff 109 19 partner partner NN cord-271701-tx0lqgff 109 20 by by IN cord-271701-tx0lqgff 109 21 the the DT cord-271701-tx0lqgff 109 22 co co NN cord-271701-tx0lqgff 109 23 - - VBD cord-271701-tx0lqgff 109 24 expressed express VBN cord-271701-tx0lqgff 109 25 ubiquitin ubiquitin NN cord-271701-tx0lqgff 109 26 carboxyl carboxyl NN cord-271701-tx0lqgff 109 27 - - HYPH cord-271701-tx0lqgff 109 28 terminal terminal NN cord-271701-tx0lqgff 109 29 hydrolase hydrolase NN cord-271701-tx0lqgff 109 30 1 1 CD cord-271701-tx0lqgff 109 31 ( ( -LRB- cord-271701-tx0lqgff 109 32 Upb1 Upb1 NNP cord-271701-tx0lqgff 109 33 , , , cord-271701-tx0lqgff 109 34 Figure figure NN cord-271701-tx0lqgff 109 35 2A 2a CD cord-271701-tx0lqgff 109 36 ) ) -RRB- cord-271701-tx0lqgff 109 37 ( ( -LRB- cord-271701-tx0lqgff 109 38 10 10 CD cord-271701-tx0lqgff 109 39 , , , cord-271701-tx0lqgff 109 40 14 14 CD cord-271701-tx0lqgff 109 41 ) ) -RRB- cord-271701-tx0lqgff 109 42 . . . cord-271701-tx0lqgff 110 1 The the DT cord-271701-tx0lqgff 110 2 second second JJ cord-271701-tx0lqgff 110 3 proteolytic proteolytic JJ cord-271701-tx0lqgff 110 4 step step NN cord-271701-tx0lqgff 110 5 , , , cord-271701-tx0lqgff 110 6 catalysed catalyse VBN cord-271701-tx0lqgff 110 7 by by IN cord-271701-tx0lqgff 110 8 a a DT cord-271701-tx0lqgff 110 9 recombinant recombinant JJ cord-271701-tx0lqgff 110 10 form form NN cord-271701-tx0lqgff 110 11 of of IN cord-271701-tx0lqgff 110 12 the the DT cord-271701-tx0lqgff 110 13 SARS SARS NNP cord-271701-tx0lqgff 110 14 - - HYPH cord-271701-tx0lqgff 110 15 CoV CoV NNP cord-271701-tx0lqgff 110 16 nsp5 nsp5 NN cord-271701-tx0lqgff 110 17 main main JJ cord-271701-tx0lqgff 110 18 protease protease NN cord-271701-tx0lqgff 110 19 ( ( -LRB- cord-271701-tx0lqgff 110 20 15 15 CD cord-271701-tx0lqgff 110 21 ) ) -RRB- cord-271701-tx0lqgff 110 22 , , , cord-271701-tx0lqgff 110 23 removed remove VBD cord-271701-tx0lqgff 110 24 the the DT cord-271701-tx0lqgff 110 25 C c NN cord-271701-tx0lqgff 110 26 - - HYPH cord-271701-tx0lqgff 110 27 terminal terminal NN cord-271701-tx0lqgff 111 1 His -PRON- PRP$ cord-271701-tx0lqgff 111 2 6 6 CD cord-271701-tx0lqgff 111 3 -tag -tag RBS cord-271701-tx0lqgff 111 4 and and CC cord-271701-tx0lqgff 111 5 was be VBD cord-271701-tx0lqgff 111 6 performed perform VBN cord-271701-tx0lqgff 111 7 either either CC cord-271701-tx0lqgff 111 8 in in IN cord-271701-tx0lqgff 111 9 solution solution NN cord-271701-tx0lqgff 111 10 ( ( -LRB- cord-271701-tx0lqgff 111 11 Figure figure NN cord-271701-tx0lqgff 111 12 2A 2a NN cord-271701-tx0lqgff 111 13 and and CC cord-271701-tx0lqgff 111 14 B b NN cord-271701-tx0lqgff 111 15 ) ) -RRB- cord-271701-tx0lqgff 111 16 or or CC cord-271701-tx0lqgff 111 17 when when WRB cord-271701-tx0lqgff 111 18 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 111 19 was be VBD cord-271701-tx0lqgff 111 20 immobilised immobilise VBN cord-271701-tx0lqgff 111 21 to to IN cord-271701-tx0lqgff 111 22 Talon Talon NNP cord-271701-tx0lqgff 111 23 beads bead NNS cord-271701-tx0lqgff 111 24 . . . cord-271701-tx0lqgff 112 1 This this DT cord-271701-tx0lqgff 112 2 procedure procedure NN cord-271701-tx0lqgff 112 3 yielded yield VBD cord-271701-tx0lqgff 112 4 SARS SARS NNP cord-271701-tx0lqgff 112 5 - - HYPH cord-271701-tx0lqgff 112 6 CoV CoV NNP cord-271701-tx0lqgff 112 7 nsp8 nsp8 NN cord-271701-tx0lqgff 112 8 with with IN cord-271701-tx0lqgff 112 9 its -PRON- PRP$ cord-271701-tx0lqgff 112 10 exact exact JJ cord-271701-tx0lqgff 112 11 natural natural JJ cord-271701-tx0lqgff 112 12 Nand Nand NNP cord-271701-tx0lqgff 112 13 C C NNP cord-271701-tx0lqgff 112 14 - - HYPH cord-271701-tx0lqgff 112 15 terminus terminus NNP cord-271701-tx0lqgff 112 16 ( ( -LRB- cord-271701-tx0lqgff 112 17 replicase replicase NN cord-271701-tx0lqgff 112 18 residues residue NNS cord-271701-tx0lqgff 112 19 Ala-3920 Ala-3920 NNP cord-271701-tx0lqgff 112 20 and and CC cord-271701-tx0lqgff 112 21 Gln-4117 gln-4117 NN cord-271701-tx0lqgff 112 22 , , , cord-271701-tx0lqgff 112 23 respectively respectively RB cord-271701-tx0lqgff 112 24 ; ; : cord-271701-tx0lqgff 112 25 Figure figure NN cord-271701-tx0lqgff 112 26 2A 2a CD cord-271701-tx0lqgff 112 27 ) ) -RRB- cord-271701-tx0lqgff 112 28 , , , cord-271701-tx0lqgff 112 29 the the DT cord-271701-tx0lqgff 112 30 product product NN cord-271701-tx0lqgff 112 31 that that WDT cord-271701-tx0lqgff 112 32 is be VBZ cord-271701-tx0lqgff 112 33 normally normally RB cord-271701-tx0lqgff 112 34 liberated liberate VBN cord-271701-tx0lqgff 112 35 by by IN cord-271701-tx0lqgff 112 36 the the DT cord-271701-tx0lqgff 112 37 nsp5-driven nsp5-driven NNP cord-271701-tx0lqgff 112 38 autoprocessing autoprocesse VBG cord-271701-tx0lqgff 112 39 of of IN cord-271701-tx0lqgff 112 40 the the DT cord-271701-tx0lqgff 112 41 SARS SARS NNP cord-271701-tx0lqgff 112 42 - - HYPH cord-271701-tx0lqgff 112 43 CoV CoV NNP cord-271701-tx0lqgff 112 44 replicase replicase NNP cord-271701-tx0lqgff 112 45 polyproteins polyproteins NNP cord-271701-tx0lqgff 112 46 ( ( -LRB- cord-271701-tx0lqgff 112 47 19 19 CD cord-271701-tx0lqgff 112 48 ) ) -RRB- cord-271701-tx0lqgff 112 49 . . . cord-271701-tx0lqgff 113 1 In in IN cord-271701-tx0lqgff 113 2 accordance accordance NN cord-271701-tx0lqgff 113 3 with with IN cord-271701-tx0lqgff 113 4 the the DT cord-271701-tx0lqgff 113 5 octameric octameric JJ cord-271701-tx0lqgff 113 6 state state NN cord-271701-tx0lqgff 113 7 observed observe VBN cord-271701-tx0lqgff 113 8 in in IN cord-271701-tx0lqgff 113 9 cross cross JJ cord-271701-tx0lqgff 113 10 - - JJ cord-271701-tx0lqgff 113 11 linking link VBG cord-271701-tx0lqgff 113 12 experiments experiment NNS cord-271701-tx0lqgff 113 13 using use VBG cord-271701-tx0lqgff 113 14 glutaraldehyde glutaraldehyde VBN cord-271701-tx0lqgff 113 15 ( ( -LRB- cord-271701-tx0lqgff 113 16 Supplementary Supplementary NNP cord-271701-tx0lqgff 113 17 Figure Figure NNP cord-271701-tx0lqgff 113 18 S1 S1 NNP cord-271701-tx0lqgff 113 19 ) ) -RRB- cord-271701-tx0lqgff 113 20 or or CC cord-271701-tx0lqgff 113 21 ethylene ethylene NN cord-271701-tx0lqgff 113 22 glycolbis glycolbis NNP cord-271701-tx0lqgff 113 23 ( ( -LRB- cord-271701-tx0lqgff 113 24 13 13 CD cord-271701-tx0lqgff 113 25 ) ) -RRB- cord-271701-tx0lqgff 113 26 , , , cord-271701-tx0lqgff 113 27 the the DT cord-271701-tx0lqgff 113 28 hydrodynamic hydrodynamic JJ cord-271701-tx0lqgff 113 29 profile profile NN cord-271701-tx0lqgff 113 30 of of IN cord-271701-tx0lqgff 113 31 the the DT cord-271701-tx0lqgff 113 32 untagged untagged JJ cord-271701-tx0lqgff 113 33 nsp8 nsp8 NN cord-271701-tx0lqgff 113 34 corresponded correspond VBD cord-271701-tx0lqgff 113 35 to to IN cord-271701-tx0lqgff 113 36 a a DT cord-271701-tx0lqgff 113 37 mass mass NN cord-271701-tx0lqgff 113 38 of of IN cord-271701-tx0lqgff 113 39 $ $ $ cord-271701-tx0lqgff 113 40 160 160 CD cord-271701-tx0lqgff 113 41 kDa kDa NNS cord-271701-tx0lqgff 113 42 ( ( -LRB- cord-271701-tx0lqgff 113 43 Figure Figure NNP cord-271701-tx0lqgff 113 44 2D 2D NNP cord-271701-tx0lqgff 113 45 ) ) -RRB- cord-271701-tx0lqgff 113 46 . . . cord-271701-tx0lqgff 114 1 To to TO cord-271701-tx0lqgff 114 2 identify identify VB cord-271701-tx0lqgff 114 3 and and CC cord-271701-tx0lqgff 114 4 explain explain VB cord-271701-tx0lqgff 114 5 differences difference NNS cord-271701-tx0lqgff 114 6 with with IN cord-271701-tx0lqgff 114 7 previously previously RB cord-271701-tx0lqgff 114 8 published publish VBN cord-271701-tx0lqgff 114 9 observations observation NNS cord-271701-tx0lqgff 114 10 , , , cord-271701-tx0lqgff 114 11 we -PRON- PRP cord-271701-tx0lqgff 114 12 also also RB cord-271701-tx0lqgff 114 13 produced produce VBD cord-271701-tx0lqgff 114 14 and and CC cord-271701-tx0lqgff 114 15 characterised characterise VBN cord-271701-tx0lqgff 114 16 N n CD cord-271701-tx0lqgff 114 17 - - HYPH cord-271701-tx0lqgff 114 18 and and CC cord-271701-tx0lqgff 114 19 C C NNP cord-271701-tx0lqgff 114 20 - - HYPH cord-271701-tx0lqgff 114 21 terminally terminally RB cord-271701-tx0lqgff 114 22 tagged tag VBN cord-271701-tx0lqgff 114 23 forms form NNS cord-271701-tx0lqgff 114 24 of of IN cord-271701-tx0lqgff 114 25 nsp8 nsp8 NN cord-271701-tx0lqgff 114 26 ( ( -LRB- cord-271701-tx0lqgff 114 27 Figure figure NN cord-271701-tx0lqgff 114 28 2C 2c NN cord-271701-tx0lqgff 114 29 ) ) -RRB- cord-271701-tx0lqgff 114 30 . . . cord-271701-tx0lqgff 115 1 Importantly importantly RB cord-271701-tx0lqgff 115 2 , , , cord-271701-tx0lqgff 115 3 under under IN cord-271701-tx0lqgff 115 4 the the DT cord-271701-tx0lqgff 115 5 same same JJ cord-271701-tx0lqgff 115 6 assay assay NN cord-271701-tx0lqgff 115 7 conditions condition NNS cord-271701-tx0lqgff 115 8 , , , cord-271701-tx0lqgff 115 9 the the DT cord-271701-tx0lqgff 115 10 N n NN cord-271701-tx0lqgff 115 11 - - HYPH cord-271701-tx0lqgff 115 12 terminally terminally RB cord-271701-tx0lqgff 115 13 His -PRON- PRP$ cord-271701-tx0lqgff 115 14 6 6 CD cord-271701-tx0lqgff 115 15 -tagged -tagged CD cord-271701-tx0lqgff 115 16 nsp8 nsp8 CD cord-271701-tx0lqgff 115 17 ( ( -LRB- cord-271701-tx0lqgff 115 18 His -PRON- PRP$ cord-271701-tx0lqgff 115 19 - - HYPH cord-271701-tx0lqgff 115 20 nsp8 nsp8 NN cord-271701-tx0lqgff 115 21 ) ) -RRB- cord-271701-tx0lqgff 115 22 that that WDT cord-271701-tx0lqgff 115 23 was be VBD cord-271701-tx0lqgff 115 24 used use VBN cord-271701-tx0lqgff 115 25 in in IN cord-271701-tx0lqgff 115 26 the the DT cord-271701-tx0lqgff 115 27 original original JJ cord-271701-tx0lqgff 115 28 nsp8 nsp8 NNP cord-271701-tx0lqgff 115 29 RdRp RdRp NNP cord-271701-tx0lqgff 115 30 activity activity NN cord-271701-tx0lqgff 115 31 study study NN cord-271701-tx0lqgff 115 32 ( ( -LRB- cord-271701-tx0lqgff 115 33 12 12 CD cord-271701-tx0lqgff 115 34 ) ) -RRB- cord-271701-tx0lqgff 115 35 showed show VBD cord-271701-tx0lqgff 115 36 a a DT cord-271701-tx0lqgff 115 37 marked marked JJ cord-271701-tx0lqgff 115 38 difference difference NN cord-271701-tx0lqgff 115 39 in in IN cord-271701-tx0lqgff 115 40 multimerization multimerization NN cord-271701-tx0lqgff 115 41 behaviour behaviour NN cord-271701-tx0lqgff 115 42 ( ( -LRB- cord-271701-tx0lqgff 115 43 Figure figure NN cord-271701-tx0lqgff 115 44 2D 2D NNP cord-271701-tx0lqgff 115 45 and and CC cord-271701-tx0lqgff 115 46 Supplementary Supplementary NNP cord-271701-tx0lqgff 115 47 Figure Figure NNP cord-271701-tx0lqgff 115 48 S1 S1 NNP cord-271701-tx0lqgff 115 49 ) ) -RRB- cord-271701-tx0lqgff 115 50 . . . cord-271701-tx0lqgff 116 1 On on IN cord-271701-tx0lqgff 116 2 the the DT cord-271701-tx0lqgff 116 3 other other JJ cord-271701-tx0lqgff 116 4 hand hand NN cord-271701-tx0lqgff 116 5 , , , cord-271701-tx0lqgff 116 6 little little JJ cord-271701-tx0lqgff 116 7 difference difference NN cord-271701-tx0lqgff 116 8 was be VBD cord-271701-tx0lqgff 116 9 observed observe VBN cord-271701-tx0lqgff 116 10 between between IN cord-271701-tx0lqgff 116 11 untagged untagged JJ cord-271701-tx0lqgff 116 12 nsp8 nsp8 NNP cord-271701-tx0lqgff 116 13 and and CC cord-271701-tx0lqgff 116 14 a a DT cord-271701-tx0lqgff 116 15 C c NN cord-271701-tx0lqgff 116 16 - - HYPH cord-271701-tx0lqgff 116 17 terminally terminally RB cord-271701-tx0lqgff 116 18 His -PRON- PRP$ cord-271701-tx0lqgff 116 19 6 6 CD cord-271701-tx0lqgff 116 20 -tagged -tagged JJ cord-271701-tx0lqgff 116 21 version version NN cord-271701-tx0lqgff 116 22 of of IN cord-271701-tx0lqgff 116 23 the the DT cord-271701-tx0lqgff 116 24 protein protein NN cord-271701-tx0lqgff 116 25 ( ( -LRB- cord-271701-tx0lqgff 116 26 nsp8-His nsp8-his UH cord-271701-tx0lqgff 116 27 ; ; : cord-271701-tx0lqgff 116 28 Figure figure NN cord-271701-tx0lqgff 116 29 2E 2e NN cord-271701-tx0lqgff 116 30 ) ) -RRB- cord-271701-tx0lqgff 116 31 . . . cord-271701-tx0lqgff 117 1 To to TO cord-271701-tx0lqgff 117 2 investigate investigate VB cord-271701-tx0lqgff 117 3 whether whether IN cord-271701-tx0lqgff 117 4 nsp7 nsp7 PRP cord-271701-tx0lqgff 117 5 could could MD cord-271701-tx0lqgff 117 6 influence influence VB cord-271701-tx0lqgff 117 7 the the DT cord-271701-tx0lqgff 117 8 change change NN cord-271701-tx0lqgff 117 9 in in IN cord-271701-tx0lqgff 117 10 multimerisation multimerisation NN cord-271701-tx0lqgff 117 11 behaviour behaviour NN cord-271701-tx0lqgff 117 12 , , , cord-271701-tx0lqgff 117 13 we -PRON- PRP cord-271701-tx0lqgff 117 14 next next RB cord-271701-tx0lqgff 117 15 added add VBD cord-271701-tx0lqgff 117 16 separately separately RB cord-271701-tx0lqgff 117 17 purified purify VBN cord-271701-tx0lqgff 117 18 and and CC cord-271701-tx0lqgff 117 19 C c NN cord-271701-tx0lqgff 117 20 - - , cord-271701-tx0lqgff 117 21 terminally terminally RB cord-271701-tx0lqgff 117 22 processed process VBN cord-271701-tx0lqgff 117 23 nsp7 nsp7 PRP cord-271701-tx0lqgff 117 24 to to IN cord-271701-tx0lqgff 117 25 the the DT cord-271701-tx0lqgff 117 26 different different JJ cord-271701-tx0lqgff 117 27 nsp8 nsp8 JJ cord-271701-tx0lqgff 117 28 preparations preparation NNS cord-271701-tx0lqgff 117 29 . . . cord-271701-tx0lqgff 118 1 Interestingly interestingly RB cord-271701-tx0lqgff 118 2 , , , cord-271701-tx0lqgff 118 3 we -PRON- PRP cord-271701-tx0lqgff 118 4 found find VBD cord-271701-tx0lqgff 118 5 that that IN cord-271701-tx0lqgff 118 6 nsp8 nsp8 NN cord-271701-tx0lqgff 118 7 and and CC cord-271701-tx0lqgff 118 8 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 118 9 could could MD cord-271701-tx0lqgff 118 10 both both DT cord-271701-tx0lqgff 118 11 associate associate VB cord-271701-tx0lqgff 118 12 with with IN cord-271701-tx0lqgff 118 13 this this DT cord-271701-tx0lqgff 118 14 protein protein NN cord-271701-tx0lqgff 118 15 , , , cord-271701-tx0lqgff 118 16 in in IN cord-271701-tx0lqgff 118 17 accordance accordance NN cord-271701-tx0lqgff 118 18 with with IN cord-271701-tx0lqgff 118 19 published publish VBN cord-271701-tx0lqgff 118 20 data datum NNS cord-271701-tx0lqgff 118 21 ( ( -LRB- cord-271701-tx0lqgff 118 22 13 13 CD cord-271701-tx0lqgff 118 23 ) ) -RRB- cord-271701-tx0lqgff 118 24 , , , cord-271701-tx0lqgff 118 25 but but CC cord-271701-tx0lqgff 118 26 that that IN cord-271701-tx0lqgff 118 27 His -PRON- PRP$ cord-271701-tx0lqgff 118 28 - - HYPH cord-271701-tx0lqgff 118 29 nsp8 nsp8 NN cord-271701-tx0lqgff 118 30 was be VBD cord-271701-tx0lqgff 118 31 unable unable JJ cord-271701-tx0lqgff 118 32 to to TO cord-271701-tx0lqgff 118 33 do do VB cord-271701-tx0lqgff 118 34 so so RB cord-271701-tx0lqgff 118 35 within within IN cord-271701-tx0lqgff 118 36 the the DT cord-271701-tx0lqgff 118 37 frame frame NN cord-271701-tx0lqgff 118 38 of of IN cord-271701-tx0lqgff 118 39 our -PRON- PRP$ cord-271701-tx0lqgff 118 40 experimental experimental JJ cord-271701-tx0lqgff 118 41 conditions condition NNS cord-271701-tx0lqgff 118 42 ( ( -LRB- cord-271701-tx0lqgff 118 43 Figure figure NN cord-271701-tx0lqgff 118 44 2F 2f NN cord-271701-tx0lqgff 118 45 ) ) -RRB- cord-271701-tx0lqgff 118 46 . . . cord-271701-tx0lqgff 119 1 Consequently consequently RB cord-271701-tx0lqgff 119 2 , , , cord-271701-tx0lqgff 119 3 although although IN cord-271701-tx0lqgff 119 4 various various JJ cord-271701-tx0lqgff 119 5 lines line NNS cord-271701-tx0lqgff 119 6 of of IN cord-271701-tx0lqgff 119 7 evidence evidence NN cord-271701-tx0lqgff 119 8 support support VBP cord-271701-tx0lqgff 119 9 the the DT cord-271701-tx0lqgff 119 10 observation observation NN cord-271701-tx0lqgff 119 11 that that IN cord-271701-tx0lqgff 119 12 nsp7 nsp7 NNP cord-271701-tx0lqgff 119 13 and and CC cord-271701-tx0lqgff 119 14 nsp8 nsp8 NN cord-271701-tx0lqgff 119 15 can can MD cord-271701-tx0lqgff 119 16 form form VB cord-271701-tx0lqgff 119 17 a a DT cord-271701-tx0lqgff 119 18 hexadecamer hexadecamer NN cord-271701-tx0lqgff 119 19 , , , cord-271701-tx0lqgff 119 20 it -PRON- PRP cord-271701-tx0lqgff 119 21 now now RB cord-271701-tx0lqgff 119 22 appears appear VBZ cord-271701-tx0lqgff 119 23 that that IN cord-271701-tx0lqgff 119 24 the the DT cord-271701-tx0lqgff 119 25 correct correct JJ cord-271701-tx0lqgff 119 26 N n CD cord-271701-tx0lqgff 119 27 - - HYPH cord-271701-tx0lqgff 119 28 terminal terminal NN cord-271701-tx0lqgff 119 29 processing processing NN cord-271701-tx0lqgff 119 30 of of IN cord-271701-tx0lqgff 119 31 nsp8 nsp8 NN cord-271701-tx0lqgff 119 32 is be VBZ cord-271701-tx0lqgff 119 33 a a DT cord-271701-tx0lqgff 119 34 significant significant JJ cord-271701-tx0lqgff 119 35 factor factor NN cord-271701-tx0lqgff 119 36 in in IN cord-271701-tx0lqgff 119 37 determining determine VBG cord-271701-tx0lqgff 119 38 the the DT cord-271701-tx0lqgff 119 39 final final JJ cord-271701-tx0lqgff 119 40 oligomeric oligomeric JJ cord-271701-tx0lqgff 119 41 state state NN cord-271701-tx0lqgff 119 42 of of IN cord-271701-tx0lqgff 119 43 the the DT cord-271701-tx0lqgff 119 44 protein protein NN cord-271701-tx0lqgff 119 45 . . . cord-271701-tx0lqgff 120 1 A a DT cord-271701-tx0lqgff 120 2 unique unique JJ cord-271701-tx0lqgff 120 3 feature feature NN cord-271701-tx0lqgff 120 4 of of IN cord-271701-tx0lqgff 120 5 the the DT cord-271701-tx0lqgff 120 6 hexadecameric hexadecameric NNP cord-271701-tx0lqgff 120 7 SARS SARS NNP cord-271701-tx0lqgff 120 8 - - HYPH cord-271701-tx0lqgff 120 9 CoV CoV NNP cord-271701-tx0lqgff 120 10 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 120 11 + + SYM cord-271701-tx0lqgff 120 12 8 8 CD cord-271701-tx0lqgff 120 13 ) ) -RRB- cord-271701-tx0lqgff 120 14 structure structure NN cord-271701-tx0lqgff 120 15 is be VBZ cord-271701-tx0lqgff 120 16 the the DT cord-271701-tx0lqgff 120 17 fact fact NN cord-271701-tx0lqgff 120 18 that that IN cord-271701-tx0lqgff 120 19 it -PRON- PRP cord-271701-tx0lqgff 120 20 does do VBZ cord-271701-tx0lqgff 120 21 not not RB cord-271701-tx0lqgff 120 22 derive derive VB cord-271701-tx0lqgff 120 23 from from IN cord-271701-tx0lqgff 120 24 stacking stack VBG cord-271701-tx0lqgff 120 25 of of IN cord-271701-tx0lqgff 120 26 its -PRON- PRP$ cord-271701-tx0lqgff 120 27 protein protein NN cord-271701-tx0lqgff 120 28 subunits subunit NNS cord-271701-tx0lqgff 120 29 , , , cord-271701-tx0lqgff 120 30 but but CC cord-271701-tx0lqgff 120 31 rather rather RB cord-271701-tx0lqgff 120 32 from from IN cord-271701-tx0lqgff 120 33 stable stable JJ cord-271701-tx0lqgff 120 34 inter inter JJ cord-271701-tx0lqgff 120 35 - - NNS cord-271701-tx0lqgff 120 36 connections connection NNS cord-271701-tx0lqgff 120 37 of of IN cord-271701-tx0lqgff 120 38 the the DT cord-271701-tx0lqgff 120 39 ' ' `` cord-271701-tx0lqgff 120 40 golf golf NN cord-271701-tx0lqgff 120 41 club club NN cord-271701-tx0lqgff 120 42 - - HYPH cord-271701-tx0lqgff 120 43 like like JJ cord-271701-tx0lqgff 120 44 ' ' '' cord-271701-tx0lqgff 120 45 nsp8 nsp8 JJ cord-271701-tx0lqgff 120 46 molecules molecule NNS cord-271701-tx0lqgff 120 47 ( ( -LRB- cord-271701-tx0lqgff 120 48 Figure figure NN cord-271701-tx0lqgff 120 49 1B 1b CD cord-271701-tx0lqgff 120 50 ) ) -RRB- cord-271701-tx0lqgff 120 51 ( ( -LRB- cord-271701-tx0lqgff 120 52 13 13 CD cord-271701-tx0lqgff 120 53 ) ) -RRB- cord-271701-tx0lqgff 120 54 . . . cord-271701-tx0lqgff 121 1 The the DT cord-271701-tx0lqgff 121 2 structural structural JJ cord-271701-tx0lqgff 121 3 support support NN cord-271701-tx0lqgff 121 4 of of IN cord-271701-tx0lqgff 121 5 the the DT cord-271701-tx0lqgff 121 6 nsp8 nsp8 NN cord-271701-tx0lqgff 121 7 , , , cord-271701-tx0lqgff 121 8 followed follow VBN cord-271701-tx0lqgff 121 9 by by IN cord-271701-tx0lqgff 121 10 purification purification NN cord-271701-tx0lqgff 121 11 and and CC cord-271701-tx0lqgff 121 12 cleavage cleavage NN cord-271701-tx0lqgff 121 13 by by IN cord-271701-tx0lqgff 121 14 recombinant recombinant JJ cord-271701-tx0lqgff 121 15 SARS SARS NNP cord-271701-tx0lqgff 121 16 - - HYPH cord-271701-tx0lqgff 121 17 CoV CoV NNP cord-271701-tx0lqgff 121 18 nsp5 nsp5 NN cord-271701-tx0lqgff 121 19 main main JJ cord-271701-tx0lqgff 121 20 protease protease NN cord-271701-tx0lqgff 121 21 to to TO cord-271701-tx0lqgff 121 22 remove remove VB cord-271701-tx0lqgff 121 23 the the DT cord-271701-tx0lqgff 121 24 C c NN cord-271701-tx0lqgff 121 25 - - HYPH cord-271701-tx0lqgff 121 26 terminal terminal NN cord-271701-tx0lqgff 122 1 His -PRON- PRP$ cord-271701-tx0lqgff 122 2 6 6 CD cord-271701-tx0lqgff 122 3 -tag -tag RBS cord-271701-tx0lqgff 122 4 and and CC cord-271701-tx0lqgff 122 5 its -PRON- PRP$ cord-271701-tx0lqgff 122 6 upstream upstream JJ cord-271701-tx0lqgff 122 7 GSSG GSSG NNP cord-271701-tx0lqgff 122 8 linker linker NN cord-271701-tx0lqgff 122 9 . . . cord-271701-tx0lqgff 123 1 ( ( -LRB- cord-271701-tx0lqgff 123 2 B b NN cord-271701-tx0lqgff 123 3 ) ) -RRB- cord-271701-tx0lqgff 124 1 Eighteen eighteen CD cord-271701-tx0lqgff 124 2 percent percent NN cord-271701-tx0lqgff 124 3 SDS SDS NNP cord-271701-tx0lqgff 124 4 - - HYPH cord-271701-tx0lqgff 124 5 PAGE PAGE NNP cord-271701-tx0lqgff 124 6 analysis analysis NN cord-271701-tx0lqgff 124 7 of of IN cord-271701-tx0lqgff 124 8 nsp5-treated nsp5-treate VBN cord-271701-tx0lqgff 124 9 , , , cord-271701-tx0lqgff 124 10 purified purify VBN cord-271701-tx0lqgff 125 1 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 125 2 demonstrates demonstrate VBZ cord-271701-tx0lqgff 125 3 near near RB cord-271701-tx0lqgff 125 4 - - HYPH cord-271701-tx0lqgff 125 5 complete complete JJ cord-271701-tx0lqgff 125 6 release release NN cord-271701-tx0lqgff 125 7 of of IN cord-271701-tx0lqgff 125 8 the the DT cord-271701-tx0lqgff 125 9 C C NNP cord-271701-tx0lqgff 125 10 - - HYPH cord-271701-tx0lqgff 125 11 terminal terminal NN cord-271701-tx0lqgff 126 1 His -PRON- PRP$ cord-271701-tx0lqgff 126 2 6 6 CD cord-271701-tx0lqgff 126 3 -tag -tag RB cord-271701-tx0lqgff 126 4 within within IN cord-271701-tx0lqgff 126 5 60 60 CD cord-271701-tx0lqgff 126 6 min min NN cord-271701-tx0lqgff 126 7 . . . cord-271701-tx0lqgff 127 1 The the DT cord-271701-tx0lqgff 127 2 maltose maltose NN cord-271701-tx0lqgff 127 3 binding bind VBG cord-271701-tx0lqgff 127 4 protein protein NN cord-271701-tx0lqgff 127 5 ( ( -LRB- cord-271701-tx0lqgff 127 6 MBP MBP NNP cord-271701-tx0lqgff 127 7 ) ) -RRB- cord-271701-tx0lqgff 127 8 was be VBD cord-271701-tx0lqgff 127 9 added add VBN cord-271701-tx0lqgff 127 10 to to IN cord-271701-tx0lqgff 127 11 the the DT cord-271701-tx0lqgff 127 12 reaction reaction NN cord-271701-tx0lqgff 127 13 to to TO cord-271701-tx0lqgff 127 14 serve serve VB cord-271701-tx0lqgff 127 15 as as IN cord-271701-tx0lqgff 127 16 an an DT cord-271701-tx0lqgff 127 17 independent independent JJ cord-271701-tx0lqgff 127 18 loading loading NN cord-271701-tx0lqgff 127 19 control control NN cord-271701-tx0lqgff 127 20 . . . cord-271701-tx0lqgff 128 1 Asterisks asterisk NNS cord-271701-tx0lqgff 128 2 indicate indicate VBP cord-271701-tx0lqgff 128 3 non non JJ cord-271701-tx0lqgff 128 4 - - JJ cord-271701-tx0lqgff 128 5 specific specific JJ cord-271701-tx0lqgff 128 6 bands band NNS cord-271701-tx0lqgff 128 7 . . . cord-271701-tx0lqgff 129 1 ( ( -LRB- cord-271701-tx0lqgff 129 2 C C NNP cord-271701-tx0lqgff 129 3 ) ) -RRB- cord-271701-tx0lqgff 130 1 In in IN cord-271701-tx0lqgff 130 2 addition addition NN cord-271701-tx0lqgff 130 3 to to IN cord-271701-tx0lqgff 130 4 the the DT cord-271701-tx0lqgff 130 5 tag tag NN cord-271701-tx0lqgff 130 6 - - HYPH cord-271701-tx0lqgff 130 7 less less JJR cord-271701-tx0lqgff 130 8 nps8 nps8 NN cord-271701-tx0lqgff 130 9 and and CC cord-271701-tx0lqgff 130 10 nsp8-His nsp8-his UH cord-271701-tx0lqgff 130 11 , , , cord-271701-tx0lqgff 130 12 we -PRON- PRP cord-271701-tx0lqgff 130 13 also also RB cord-271701-tx0lqgff 130 14 produced produce VBD cord-271701-tx0lqgff 130 15 the the DT cord-271701-tx0lqgff 130 16 N n NN cord-271701-tx0lqgff 130 17 - - HYPH cord-271701-tx0lqgff 130 18 terminally terminally RB cord-271701-tx0lqgff 130 19 His -PRON- PRP$ cord-271701-tx0lqgff 130 20 6 6 CD cord-271701-tx0lqgff 130 21 -tagged -tagged CD cord-271701-tx0lqgff 130 22 nsp8 nsp8 CD cord-271701-tx0lqgff 130 23 ( ( -LRB- cord-271701-tx0lqgff 130 24 His -PRON- PRP$ cord-271701-tx0lqgff 130 25 - - HYPH cord-271701-tx0lqgff 130 26 nsp8 nsp8 NN cord-271701-tx0lqgff 130 27 ) ) -RRB- cord-271701-tx0lqgff 130 28 used use VBN cord-271701-tx0lqgff 130 29 by by IN cord-271701-tx0lqgff 130 30 Imbert Imbert NNP cord-271701-tx0lqgff 130 31 et et NNP cord-271701-tx0lqgff 130 32 al al NNP cord-271701-tx0lqgff 130 33 . . . cord-271701-tx0lqgff 131 1 ( ( -LRB- cord-271701-tx0lqgff 131 2 12 12 CD cord-271701-tx0lqgff 131 3 ) ) -RRB- cord-271701-tx0lqgff 131 4 . . . cord-271701-tx0lqgff 132 1 ( ( -LRB- cord-271701-tx0lqgff 132 2 D D NNP cord-271701-tx0lqgff 132 3 ) ) -RRB- cord-271701-tx0lqgff 132 4 Comparative comparative JJ cord-271701-tx0lqgff 132 5 gel gel NN cord-271701-tx0lqgff 132 6 filtration filtration NN cord-271701-tx0lqgff 132 7 analysis analysis NN cord-271701-tx0lqgff 132 8 of of IN cord-271701-tx0lqgff 132 9 nsp8 nsp8 NN cord-271701-tx0lqgff 132 10 ( ( -LRB- cord-271701-tx0lqgff 132 11 22 22 CD cord-271701-tx0lqgff 132 12 kDa kDa NNS cord-271701-tx0lqgff 132 13 as as IN cord-271701-tx0lqgff 132 14 a a DT cord-271701-tx0lqgff 132 15 monomer monomer NN cord-271701-tx0lqgff 132 16 ) ) -RRB- cord-271701-tx0lqgff 132 17 versus versus IN cord-271701-tx0lqgff 132 18 His -PRON- PRP$ cord-271701-tx0lqgff 132 19 - - HYPH cord-271701-tx0lqgff 132 20 nsp8 nsp8 NN cord-271701-tx0lqgff 132 21 and and CC cord-271701-tx0lqgff 132 22 ( ( -LRB- cord-271701-tx0lqgff 132 23 E e NN cord-271701-tx0lqgff 132 24 ) ) -RRB- cord-271701-tx0lqgff 132 25 nsp8 nsp8 NN cord-271701-tx0lqgff 132 26 versus versus IN cord-271701-tx0lqgff 132 27 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 132 28 . . . cord-271701-tx0lqgff 133 1 In in IN cord-271701-tx0lqgff 133 2 all all DT cord-271701-tx0lqgff 133 3 three three CD cord-271701-tx0lqgff 133 4 cases case NNS cord-271701-tx0lqgff 133 5 , , , cord-271701-tx0lqgff 133 6 nsp8 nsp8 NN cord-271701-tx0lqgff 133 7 formed form VBN cord-271701-tx0lqgff 133 8 multimers multimer NNS cord-271701-tx0lqgff 133 9 in in IN cord-271701-tx0lqgff 133 10 solution solution NN cord-271701-tx0lqgff 133 11 , , , cord-271701-tx0lqgff 133 12 but but CC cord-271701-tx0lqgff 133 13 the the DT cord-271701-tx0lqgff 133 14 apparent apparent JJ cord-271701-tx0lqgff 133 15 molecular molecular JJ cord-271701-tx0lqgff 133 16 mass mass NN cord-271701-tx0lqgff 133 17 of of IN cord-271701-tx0lqgff 133 18 complexes complex NNS cord-271701-tx0lqgff 133 19 formed form VBN cord-271701-tx0lqgff 133 20 by by IN cord-271701-tx0lqgff 133 21 both both CC cord-271701-tx0lqgff 133 22 nsp8 nsp8 NN cord-271701-tx0lqgff 133 23 and and CC cord-271701-tx0lqgff 133 24 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 133 25 was be VBD cord-271701-tx0lqgff 133 26 $ $ $ cord-271701-tx0lqgff 133 27 2-fold 2-fold CD cord-271701-tx0lqgff 133 28 higher high JJR cord-271701-tx0lqgff 133 29 than than IN cord-271701-tx0lqgff 133 30 for for IN cord-271701-tx0lqgff 133 31 complexes complex NNS cord-271701-tx0lqgff 133 32 formed form VBN cord-271701-tx0lqgff 133 33 by by IN cord-271701-tx0lqgff 133 34 His -PRON- PRP$ cord-271701-tx0lqgff 133 35 - - HYPH cord-271701-tx0lqgff 133 36 nsp8 nsp8 NN cord-271701-tx0lqgff 133 37 . . . cord-271701-tx0lqgff 134 1 ( ( -LRB- cord-271701-tx0lqgff 134 2 F F NNP cord-271701-tx0lqgff 134 3 ) ) -RRB- cord-271701-tx0lqgff 134 4 Comparative comparative JJ cord-271701-tx0lqgff 134 5 analysis analysis NN cord-271701-tx0lqgff 134 6 of of IN cord-271701-tx0lqgff 134 7 nsp8 nsp8 NN cord-271701-tx0lqgff 134 8 , , , cord-271701-tx0lqgff 134 9 nsp(7 nsp(7 IN cord-271701-tx0lqgff 134 10 + + SYM cord-271701-tx0lqgff 134 11 8 8 CD cord-271701-tx0lqgff 134 12 ) ) -RRB- cord-271701-tx0lqgff 134 13 , , , cord-271701-tx0lqgff 134 14 His -PRON- PRP$ cord-271701-tx0lqgff 134 15 - - HYPH cord-271701-tx0lqgff 134 16 nsp8 nsp8 NN cord-271701-tx0lqgff 134 17 and and CC cord-271701-tx0lqgff 134 18 nsp7+nsp8-His nsp7+nsp8-his NN cord-271701-tx0lqgff 134 19 . . . cord-271701-tx0lqgff 135 1 Only only RB cord-271701-tx0lqgff 135 2 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 135 3 + + SYM cord-271701-tx0lqgff 135 4 8 8 CD cord-271701-tx0lqgff 135 5 ) ) -RRB- cord-271701-tx0lqgff 135 6 showed show VBD cord-271701-tx0lqgff 135 7 a a DT cord-271701-tx0lqgff 135 8 molecular molecular JJ cord-271701-tx0lqgff 135 9 weight weight NN cord-271701-tx0lqgff 135 10 shift shift NN cord-271701-tx0lqgff 135 11 to to IN cord-271701-tx0lqgff 135 12 the the DT cord-271701-tx0lqgff 135 13 $ $ $ cord-271701-tx0lqgff 135 14 225-kDa 225-kda CD cord-271701-tx0lqgff 135 15 size size NN cord-271701-tx0lqgff 135 16 range range NN cord-271701-tx0lqgff 135 17 with with IN cord-271701-tx0lqgff 135 18 a a DT cord-271701-tx0lqgff 135 19 standard standard JJ cord-271701-tx0lqgff 135 20 deviation deviation NN cord-271701-tx0lqgff 135 21 of of IN cord-271701-tx0lqgff 135 22 15-kDa 15-kda CD cord-271701-tx0lqgff 135 23 ( ( -LRB- cord-271701-tx0lqgff 135 24 n n NN cord-271701-tx0lqgff 135 25 = = SYM cord-271701-tx0lqgff 135 26 3 3 CD cord-271701-tx0lqgff 135 27 ) ) -RRB- cord-271701-tx0lqgff 135 28 . . . cord-271701-tx0lqgff 136 1 This this DT cord-271701-tx0lqgff 136 2 size size NN cord-271701-tx0lqgff 136 3 is be VBZ cord-271701-tx0lqgff 136 4 indicative indicative JJ cord-271701-tx0lqgff 136 5 of of IN cord-271701-tx0lqgff 136 6 hexadecamer hexadecamer NN cord-271701-tx0lqgff 136 7 formation formation NN cord-271701-tx0lqgff 136 8 , , , cord-271701-tx0lqgff 136 9 whereas whereas IN cord-271701-tx0lqgff 136 10 the the DT cord-271701-tx0lqgff 136 11 analysis analysis NN cord-271701-tx0lqgff 136 12 of of IN cord-271701-tx0lqgff 136 13 nsp7+nsp8-His nsp7+nsp8-his NN cord-271701-tx0lqgff 136 14 showed show VBD cord-271701-tx0lqgff 136 15 dominant dominant JJ cord-271701-tx0lqgff 136 16 peaks peak NNS cord-271701-tx0lqgff 136 17 of of IN cord-271701-tx0lqgff 136 18 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 136 19 and and CC cord-271701-tx0lqgff 136 20 nsp7 nsp7 NN cord-271701-tx0lqgff 136 21 ( ( -LRB- cord-271701-tx0lqgff 136 22 which which WDT cord-271701-tx0lqgff 136 23 is be VBZ cord-271701-tx0lqgff 136 24 $ $ $ cord-271701-tx0lqgff 136 25 10 10 CD cord-271701-tx0lqgff 136 26 kDa kDa NNS cord-271701-tx0lqgff 136 27 as as IN cord-271701-tx0lqgff 136 28 a a DT cord-271701-tx0lqgff 136 29 monomer monomer NN cord-271701-tx0lqgff 136 30 ) ) -RRB- cord-271701-tx0lqgff 136 31 . . . cord-271701-tx0lqgff 137 1 octamer octamer NNP cord-271701-tx0lqgff 137 2 by by IN cord-271701-tx0lqgff 137 3 eight eight CD cord-271701-tx0lqgff 137 4 copies copy NNS cord-271701-tx0lqgff 137 5 of of IN cord-271701-tx0lqgff 137 6 nsp7 nsp7 NNP cord-271701-tx0lqgff 137 7 thus thus RB cord-271701-tx0lqgff 137 8 appears appear VBZ cord-271701-tx0lqgff 137 9 to to TO cord-271701-tx0lqgff 137 10 be be VB cord-271701-tx0lqgff 137 11 redundant redundant JJ cord-271701-tx0lqgff 137 12 , , , cord-271701-tx0lqgff 137 13 in in IN cord-271701-tx0lqgff 137 14 line line NN cord-271701-tx0lqgff 137 15 with with IN cord-271701-tx0lqgff 137 16 the the DT cord-271701-tx0lqgff 137 17 critical critical JJ cord-271701-tx0lqgff 137 18 role role NN cord-271701-tx0lqgff 137 19 for for IN cord-271701-tx0lqgff 137 20 the the DT cord-271701-tx0lqgff 137 21 nsp8 nsp8 NNP cord-271701-tx0lqgff 137 22 N n CD cord-271701-tx0lqgff 137 23 - - HYPH cord-271701-tx0lqgff 137 24 terminal terminal NN cord-271701-tx0lqgff 137 25 domain domain NN cord-271701-tx0lqgff 137 26 described describe VBN cord-271701-tx0lqgff 137 27 above above RB cord-271701-tx0lqgff 137 28 . . . cord-271701-tx0lqgff 138 1 We -PRON- PRP cord-271701-tx0lqgff 138 2 surmised surmise VBD cord-271701-tx0lqgff 138 3 therefore therefore RB cord-271701-tx0lqgff 138 4 that that IN cord-271701-tx0lqgff 138 5 the the DT cord-271701-tx0lqgff 138 6 additional additional JJ cord-271701-tx0lqgff 138 7 complexity complexity NN cord-271701-tx0lqgff 138 8 must must MD cord-271701-tx0lqgff 138 9 have have VB cord-271701-tx0lqgff 138 10 evolved evolve VBN cord-271701-tx0lqgff 138 11 to to TO cord-271701-tx0lqgff 138 12 improve improve VB cord-271701-tx0lqgff 138 13 nsp8 nsp8 NNP cord-271701-tx0lqgff 138 14 's 's POS cord-271701-tx0lqgff 138 15 function function NN cord-271701-tx0lqgff 138 16 and and CC cord-271701-tx0lqgff 138 17 set set VBD cord-271701-tx0lqgff 138 18 out out RP cord-271701-tx0lqgff 138 19 to to TO cord-271701-tx0lqgff 138 20 compare compare VB cord-271701-tx0lqgff 138 21 the the DT cord-271701-tx0lqgff 138 22 RNA RNA NNP cord-271701-tx0lqgff 138 23 binding binding NN cord-271701-tx0lqgff 138 24 capabilities capability NNS cord-271701-tx0lqgff 138 25 of of IN cord-271701-tx0lqgff 138 26 the the DT cord-271701-tx0lqgff 138 27 purified purify VBN cord-271701-tx0lqgff 138 28 nsp8 nsp8 NNP cord-271701-tx0lqgff 138 29 octamer octamer NN cord-271701-tx0lqgff 138 30 and and CC cord-271701-tx0lqgff 138 31 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 138 32 + + SYM cord-271701-tx0lqgff 138 33 8 8 CD cord-271701-tx0lqgff 138 34 ) ) -RRB- cord-271701-tx0lqgff 138 35 hexadecamer hexadecamer NN cord-271701-tx0lqgff 138 36 . . . cord-271701-tx0lqgff 139 1 By by IN cord-271701-tx0lqgff 139 2 analysing analyse VBG cord-271701-tx0lqgff 139 3 the the DT cord-271701-tx0lqgff 139 4 steady steady JJ cord-271701-tx0lqgff 139 5 - - HYPH cord-271701-tx0lqgff 139 6 state state NN cord-271701-tx0lqgff 139 7 ribonucleotide ribonucleotide NN cord-271701-tx0lqgff 139 8 - - HYPH cord-271701-tx0lqgff 139 9 protein protein NN cord-271701-tx0lqgff 139 10 ( ( -LRB- cord-271701-tx0lqgff 139 11 RNP RNP NNP cord-271701-tx0lqgff 139 12 ) ) -RRB- cord-271701-tx0lqgff 139 13 complexes complex NNS cord-271701-tx0lqgff 139 14 formed form VBN cord-271701-tx0lqgff 139 15 through through IN cord-271701-tx0lqgff 139 16 binding binding NN cord-271701-tx0lqgff 139 17 of of IN cord-271701-tx0lqgff 139 18 nsp8 nsp8 NN cord-271701-tx0lqgff 139 19 to to IN cord-271701-tx0lqgff 139 20 5 5 CD cord-271701-tx0lqgff 139 21 0 0 CD cord-271701-tx0lqgff 139 22 32 32 CD cord-271701-tx0lqgff 139 23 P p NN cord-271701-tx0lqgff 139 24 - - HYPH cord-271701-tx0lqgff 139 25 labelled label VBN cord-271701-tx0lqgff 139 26 dsRNA dsrna NN cord-271701-tx0lqgff 140 1 ( ( -LRB- cord-271701-tx0lqgff 140 2 Figure figure NN cord-271701-tx0lqgff 140 3 3A 3a CD cord-271701-tx0lqgff 140 4 ) ) -RRB- cord-271701-tx0lqgff 141 1 , , , cord-271701-tx0lqgff 141 2 we -PRON- PRP cord-271701-tx0lqgff 141 3 estimated estimate VBD cord-271701-tx0lqgff 141 4 the the DT cord-271701-tx0lqgff 141 5 nsp8 nsp8 NNP cord-271701-tx0lqgff 141 6 dissociation dissociation NN cord-271701-tx0lqgff 141 7 constant constant NN cord-271701-tx0lqgff 141 8 ( ( -LRB- cord-271701-tx0lqgff 141 9 K K NNP cord-271701-tx0lqgff 141 10 d d NNP cord-271701-tx0lqgff 141 11 ) ) -RRB- cord-271701-tx0lqgff 141 12 for for IN cord-271701-tx0lqgff 141 13 dsRNA dsrna NN cord-271701-tx0lqgff 142 1 to to TO cord-271701-tx0lqgff 142 2 be be VB cord-271701-tx0lqgff 142 3 $ $ $ cord-271701-tx0lqgff 142 4 3.3 3.3 CD cord-271701-tx0lqgff 142 5 mM mm CD cord-271701-tx0lqgff 142 6 ( ( -LRB- cord-271701-tx0lqgff 142 7 Figure Figure NNP cord-271701-tx0lqgff 142 8 3F 3F NNP cord-271701-tx0lqgff 142 9 ) ) -RRB- cord-271701-tx0lqgff 142 10 , , , cord-271701-tx0lqgff 142 11 which which WDT cord-271701-tx0lqgff 142 12 is be VBZ cord-271701-tx0lqgff 142 13 about about RB cord-271701-tx0lqgff 142 14 $ $ $ cord-271701-tx0lqgff 142 15 25-fold 25-fold CD cord-271701-tx0lqgff 142 16 higher high JJR cord-271701-tx0lqgff 142 17 than than IN cord-271701-tx0lqgff 142 18 the the DT cord-271701-tx0lqgff 142 19 apparent apparent JJ cord-271701-tx0lqgff 142 20 K K NNP cord-271701-tx0lqgff 142 21 d d NN cord-271701-tx0lqgff 142 22 of of IN cord-271701-tx0lqgff 142 23 nsp12 nsp12 CD cord-271701-tx0lqgff 142 24 under under IN cord-271701-tx0lqgff 142 25 comparable comparable JJ cord-271701-tx0lqgff 142 26 conditions condition NNS cord-271701-tx0lqgff 142 27 ( ( -LRB- cord-271701-tx0lqgff 142 28 10 10 CD cord-271701-tx0lqgff 142 29 ) ) -RRB- cord-271701-tx0lqgff 142 30 . . . cord-271701-tx0lqgff 143 1 A a DT cord-271701-tx0lqgff 143 2 comprehensive comprehensive JJ cord-271701-tx0lqgff 143 3 analysis analysis NN cord-271701-tx0lqgff 143 4 of of IN cord-271701-tx0lqgff 143 5 the the DT cord-271701-tx0lqgff 143 6 influence influence NN cord-271701-tx0lqgff 143 7 of of IN cord-271701-tx0lqgff 143 8 nsp7 nsp7 NN cord-271701-tx0lqgff 143 9 on on IN cord-271701-tx0lqgff 143 10 nsp8-dependent nsp8-dependent NNP cord-271701-tx0lqgff 143 11 RNA RNA NNP cord-271701-tx0lqgff 143 12 binding binding NN cord-271701-tx0lqgff 143 13 required require VBD cord-271701-tx0lqgff 143 14 an an DT cord-271701-tx0lqgff 143 15 nsp8 nsp8 JJ cord-271701-tx0lqgff 143 16 mutant mutant NN cord-271701-tx0lqgff 143 17 that that WDT cord-271701-tx0lqgff 143 18 was be VBD cord-271701-tx0lqgff 143 19 incapable incapable JJ cord-271701-tx0lqgff 143 20 of of IN cord-271701-tx0lqgff 143 21 RNA RNA NNP cord-271701-tx0lqgff 143 22 binding binding NN cord-271701-tx0lqgff 143 23 . . . cord-271701-tx0lqgff 144 1 To to IN cord-271701-tx0lqgff 144 2 this this DT cord-271701-tx0lqgff 144 3 end end NN cord-271701-tx0lqgff 144 4 , , , cord-271701-tx0lqgff 144 5 we -PRON- PRP cord-271701-tx0lqgff 144 6 engineered engineer VBD cord-271701-tx0lqgff 144 7 an an DT cord-271701-tx0lqgff 144 8 alanine alanine JJ cord-271701-tx0lqgff 144 9 substitution substitution NN cord-271701-tx0lqgff 144 10 of of IN cord-271701-tx0lqgff 144 11 the the DT cord-271701-tx0lqgff 144 12 conserved conserved JJ cord-271701-tx0lqgff 144 13 residue residue NN cord-271701-tx0lqgff 144 14 K58 K58 NNP cord-271701-tx0lqgff 144 15 , , , cord-271701-tx0lqgff 144 16 which which WDT cord-271701-tx0lqgff 144 17 resides reside VBZ cord-271701-tx0lqgff 144 18 in in IN cord-271701-tx0lqgff 144 19 nsp8 nsp8 NNP cord-271701-tx0lqgff 144 20 's 's POS cord-271701-tx0lqgff 144 21 proposed propose VBN cord-271701-tx0lqgff 144 22 dsRNA dsrna RB cord-271701-tx0lqgff 144 23 - - HYPH cord-271701-tx0lqgff 144 24 binding bind VBG cord-271701-tx0lqgff 144 25 channel channel NN cord-271701-tx0lqgff 144 26 [ [ -LRB- cord-271701-tx0lqgff 144 27 residues residue NNS cord-271701-tx0lqgff 144 28 55 55 CD cord-271701-tx0lqgff 144 29 - - HYPH cord-271701-tx0lqgff 144 30 78 78 CD cord-271701-tx0lqgff 144 31 ( ( -LRB- cord-271701-tx0lqgff 144 32 13 13 CD cord-271701-tx0lqgff 144 33 ) ) -RRB- cord-271701-tx0lqgff 144 34 ] ] -RRB- cord-271701-tx0lqgff 144 35 . . . cord-271701-tx0lqgff 145 1 As as IN cord-271701-tx0lqgff 145 2 is be VBZ cord-271701-tx0lqgff 145 3 evident evident JJ cord-271701-tx0lqgff 145 4 from from IN cord-271701-tx0lqgff 145 5 the the DT cord-271701-tx0lqgff 145 6 electromobility electromobility NN cord-271701-tx0lqgff 145 7 shift shift NN cord-271701-tx0lqgff 145 8 assay assay NN cord-271701-tx0lqgff 145 9 in in IN cord-271701-tx0lqgff 145 10 Figure Figure NNP cord-271701-tx0lqgff 145 11 3B 3B NNP cord-271701-tx0lqgff 145 12 , , , cord-271701-tx0lqgff 145 13 this this DT cord-271701-tx0lqgff 145 14 mutation mutation NN cord-271701-tx0lqgff 145 15 was be VBD cord-271701-tx0lqgff 145 16 sufficient sufficient JJ cord-271701-tx0lqgff 145 17 to to TO cord-271701-tx0lqgff 145 18 significantly significantly RB cord-271701-tx0lqgff 145 19 disrupt disrupt VB cord-271701-tx0lqgff 145 20 RNA RNA NNP cord-271701-tx0lqgff 145 21 binding binding NN cord-271701-tx0lqgff 145 22 . . . cord-271701-tx0lqgff 146 1 As as IN cord-271701-tx0lqgff 146 2 a a DT cord-271701-tx0lqgff 146 3 control control NN cord-271701-tx0lqgff 146 4 , , , cord-271701-tx0lqgff 146 5 we -PRON- PRP cord-271701-tx0lqgff 146 6 also also RB cord-271701-tx0lqgff 146 7 performed perform VBD cord-271701-tx0lqgff 146 8 an an DT cord-271701-tx0lqgff 146 9 aspartate aspartate NN cord-271701-tx0lqgff 146 10 - - HYPH cord-271701-tx0lqgff 146 11 to to IN cord-271701-tx0lqgff 146 12 - - HYPH cord-271701-tx0lqgff 146 13 alanine alanine NN cord-271701-tx0lqgff 146 14 substitution substitution NN cord-271701-tx0lqgff 146 15 at at IN cord-271701-tx0lqgff 146 16 position position NN cord-271701-tx0lqgff 146 17 52 52 CD cord-271701-tx0lqgff 146 18 , , , cord-271701-tx0lqgff 146 19 which which WDT cord-271701-tx0lqgff 146 20 is be VBZ cord-271701-tx0lqgff 146 21 partially partially RB cord-271701-tx0lqgff 146 22 conserved conserve VBN cord-271701-tx0lqgff 146 23 , , , cord-271701-tx0lqgff 146 24 yet yet CC cord-271701-tx0lqgff 146 25 not not RB cord-271701-tx0lqgff 146 26 expected expect VBN cord-271701-tx0lqgff 146 27 to to TO cord-271701-tx0lqgff 146 28 participate participate VB cord-271701-tx0lqgff 146 29 in in IN cord-271701-tx0lqgff 146 30 RNA RNA NNP cord-271701-tx0lqgff 146 31 backbone backbone NN cord-271701-tx0lqgff 146 32 binding bind VBG cord-271701-tx0lqgff 146 33 due due IN cord-271701-tx0lqgff 146 34 to to IN cord-271701-tx0lqgff 146 35 its -PRON- PRP$ cord-271701-tx0lqgff 146 36 negative negative JJ cord-271701-tx0lqgff 146 37 charge charge NN cord-271701-tx0lqgff 146 38 and and CC cord-271701-tx0lqgff 146 39 position position NN cord-271701-tx0lqgff 146 40 just just RB cord-271701-tx0lqgff 146 41 outside outside IN cord-271701-tx0lqgff 146 42 the the DT cord-271701-tx0lqgff 146 43 proposed propose VBN cord-271701-tx0lqgff 146 44 RNA RNA NNP cord-271701-tx0lqgff 146 45 binding binding NN cord-271701-tx0lqgff 146 46 channel channel NN cord-271701-tx0lqgff 146 47 . . . cord-271701-tx0lqgff 147 1 Indeed indeed RB cord-271701-tx0lqgff 147 2 , , , cord-271701-tx0lqgff 147 3 the the DT cord-271701-tx0lqgff 147 4 D52A d52a JJ cord-271701-tx0lqgff 147 5 mutation mutation NN cord-271701-tx0lqgff 147 6 only only RB cord-271701-tx0lqgff 147 7 induced induce VBD cord-271701-tx0lqgff 147 8 a a DT cord-271701-tx0lqgff 147 9 migratory migratory JJ cord-271701-tx0lqgff 147 10 shift shift NN cord-271701-tx0lqgff 147 11 of of IN cord-271701-tx0lqgff 147 12 the the DT cord-271701-tx0lqgff 147 13 dominant dominant JJ cord-271701-tx0lqgff 147 14 RNP RNP NNP cord-271701-tx0lqgff 147 15 signal signal NN cord-271701-tx0lqgff 147 16 towards towards IN cord-271701-tx0lqgff 147 17 the the DT cord-271701-tx0lqgff 147 18 anode anode NN cord-271701-tx0lqgff 147 19 , , , cord-271701-tx0lqgff 147 20 likely likely JJ cord-271701-tx0lqgff 147 21 as as IN cord-271701-tx0lqgff 147 22 a a DT cord-271701-tx0lqgff 147 23 result result NN cord-271701-tx0lqgff 147 24 of of IN cord-271701-tx0lqgff 147 25 the the DT cord-271701-tx0lqgff 147 26 lost lose VBN cord-271701-tx0lqgff 147 27 negative negative JJ cord-271701-tx0lqgff 147 28 charge charge NN cord-271701-tx0lqgff 147 29 ( ( -LRB- cord-271701-tx0lqgff 147 30 Figure figure NN cord-271701-tx0lqgff 147 31 3C 3c NN cord-271701-tx0lqgff 147 32 ) ) -RRB- cord-271701-tx0lqgff 147 33 . . . cord-271701-tx0lqgff 148 1 With with IN cord-271701-tx0lqgff 148 2 the the DT cord-271701-tx0lqgff 148 3 results result NNS cord-271701-tx0lqgff 148 4 obtained obtain VBN cord-271701-tx0lqgff 148 5 with with IN cord-271701-tx0lqgff 148 6 these these DT cord-271701-tx0lqgff 148 7 control control NN cord-271701-tx0lqgff 148 8 proteins protein NNS cord-271701-tx0lqgff 148 9 in in IN cord-271701-tx0lqgff 148 10 mind mind NN cord-271701-tx0lqgff 148 11 , , , cord-271701-tx0lqgff 148 12 we -PRON- PRP cord-271701-tx0lqgff 148 13 next next RB cord-271701-tx0lqgff 148 14 explored explore VBD cord-271701-tx0lqgff 148 15 the the DT cord-271701-tx0lqgff 148 16 contribution contribution NN cord-271701-tx0lqgff 148 17 of of IN cord-271701-tx0lqgff 148 18 nsp7 nsp7 NN cord-271701-tx0lqgff 148 19 to to IN cord-271701-tx0lqgff 148 20 RNA RNA NNP cord-271701-tx0lqgff 148 21 binding bind VBG cord-271701-tx0lqgff 148 22 by by IN cord-271701-tx0lqgff 148 23 the the DT cord-271701-tx0lqgff 148 24 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 148 25 + + SYM cord-271701-tx0lqgff 148 26 8 8 CD cord-271701-tx0lqgff 148 27 ) ) -RRB- cord-271701-tx0lqgff 148 28 complex complex NN cord-271701-tx0lqgff 148 29 . . . cord-271701-tx0lqgff 149 1 We -PRON- PRP cord-271701-tx0lqgff 149 2 used use VBD cord-271701-tx0lqgff 149 3 a a DT cord-271701-tx0lqgff 149 4 fixed fix VBN cord-271701-tx0lqgff 149 5 concentration concentration NN cord-271701-tx0lqgff 149 6 of of IN cord-271701-tx0lqgff 149 7 nsp7 nsp7 NN cord-271701-tx0lqgff 149 8 and and CC cord-271701-tx0lqgff 149 9 added add VBD cord-271701-tx0lqgff 149 10 either either CC cord-271701-tx0lqgff 149 11 wild wild JJ cord-271701-tx0lqgff 149 12 - - HYPH cord-271701-tx0lqgff 149 13 type type NN cord-271701-tx0lqgff 149 14 or or CC cord-271701-tx0lqgff 149 15 mutant mutant JJ cord-271701-tx0lqgff 149 16 nsp8 nsp8 NN cord-271701-tx0lqgff 149 17 up up IN cord-271701-tx0lqgff 149 18 to to IN cord-271701-tx0lqgff 149 19 the the DT cord-271701-tx0lqgff 149 20 point point NN cord-271701-tx0lqgff 149 21 where where WRB cord-271701-tx0lqgff 149 22 the the DT cord-271701-tx0lqgff 149 23 nsp7 nsp7 JJ cord-271701-tx0lqgff 149 24 : : : cord-271701-tx0lqgff 149 25 nsp8 nsp8 NN cord-271701-tx0lqgff 149 26 ratio ratio NN cord-271701-tx0lqgff 149 27 reached reach VBD cord-271701-tx0lqgff 149 28 equimolarity equimolarity NN cord-271701-tx0lqgff 149 29 . . . cord-271701-tx0lqgff 150 1 No no DT cord-271701-tx0lqgff 150 2 RNA RNA NNP cord-271701-tx0lqgff 150 3 binding binding NN cord-271701-tx0lqgff 150 4 was be VBD cord-271701-tx0lqgff 150 5 observed observe VBN cord-271701-tx0lqgff 150 6 in in IN cord-271701-tx0lqgff 150 7 the the DT cord-271701-tx0lqgff 150 8 absence absence NN cord-271701-tx0lqgff 150 9 of of IN cord-271701-tx0lqgff 150 10 nsp8 nsp8 NN cord-271701-tx0lqgff 150 11 , , , cord-271701-tx0lqgff 150 12 but but CC cord-271701-tx0lqgff 150 13 upon upon IN cord-271701-tx0lqgff 150 14 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 150 15 + + SYM cord-271701-tx0lqgff 150 16 8 8 CD cord-271701-tx0lqgff 150 17 ) ) -RRB- cord-271701-tx0lqgff 150 18 complex complex JJ cord-271701-tx0lqgff 150 19 formation formation NN cord-271701-tx0lqgff 150 20 the the DT cord-271701-tx0lqgff 150 21 amount amount NN cord-271701-tx0lqgff 150 22 of of IN cord-271701-tx0lqgff 150 23 bound bind VBN cord-271701-tx0lqgff 150 24 dsRNA dsrna NN cord-271701-tx0lqgff 150 25 rapidly rapidly RB cord-271701-tx0lqgff 150 26 increased increase VBN cord-271701-tx0lqgff 150 27 ( ( -LRB- cord-271701-tx0lqgff 150 28 Figure Figure NNP cord-271701-tx0lqgff 150 29 3D 3D NNP cord-271701-tx0lqgff 150 30 ) ) -RRB- cord-271701-tx0lqgff 150 31 . . . cord-271701-tx0lqgff 151 1 Indicative indicative JJ cord-271701-tx0lqgff 151 2 of of IN cord-271701-tx0lqgff 151 3 successful successful JJ cord-271701-tx0lqgff 151 4 complex complex JJ cord-271701-tx0lqgff 151 5 formation formation NN cord-271701-tx0lqgff 151 6 , , , cord-271701-tx0lqgff 151 7 we -PRON- PRP cord-271701-tx0lqgff 151 8 also also RB cord-271701-tx0lqgff 151 9 observed observe VBD cord-271701-tx0lqgff 151 10 a a DT cord-271701-tx0lqgff 151 11 shift shift NN cord-271701-tx0lqgff 151 12 in in IN cord-271701-tx0lqgff 151 13 the the DT cord-271701-tx0lqgff 151 14 molecular molecular JJ cord-271701-tx0lqgff 151 15 weight weight NN cord-271701-tx0lqgff 151 16 of of IN cord-271701-tx0lqgff 151 17 the the DT cord-271701-tx0lqgff 151 18 major major JJ cord-271701-tx0lqgff 151 19 RNP RNP NNP cord-271701-tx0lqgff 151 20 complex complex NN cord-271701-tx0lqgff 151 21 formed form VBN cord-271701-tx0lqgff 151 22 ( ( -LRB- cord-271701-tx0lqgff 151 23 Figure Figure NNP cord-271701-tx0lqgff 151 24 3D 3D NNP cord-271701-tx0lqgff 151 25 ) ) -RRB- cord-271701-tx0lqgff 151 26 . . . cord-271701-tx0lqgff 152 1 Western western JJ cord-271701-tx0lqgff 152 2 blot blot NN cord-271701-tx0lqgff 152 3 analysis analysis NN cord-271701-tx0lqgff 152 4 confirmed confirm VBD cord-271701-tx0lqgff 152 5 that that IN cord-271701-tx0lqgff 152 6 both both CC cord-271701-tx0lqgff 152 7 nsp7 nsp7 NN cord-271701-tx0lqgff 152 8 and and CC cord-271701-tx0lqgff 152 9 nsp8 nsp8 NN cord-271701-tx0lqgff 152 10 were be VBD cord-271701-tx0lqgff 152 11 present present JJ cord-271701-tx0lqgff 152 12 at at IN cord-271701-tx0lqgff 152 13 this this DT cord-271701-tx0lqgff 152 14 position position NN cord-271701-tx0lqgff 152 15 in in IN cord-271701-tx0lqgff 152 16 the the DT cord-271701-tx0lqgff 152 17 gel gel NN cord-271701-tx0lqgff 152 18 ( ( -LRB- cord-271701-tx0lqgff 152 19 not not RB cord-271701-tx0lqgff 152 20 shown show VBN cord-271701-tx0lqgff 152 21 ) ) -RRB- cord-271701-tx0lqgff 152 22 , , , cord-271701-tx0lqgff 152 23 but but CC cord-271701-tx0lqgff 152 24 due due IN cord-271701-tx0lqgff 152 25 to to IN cord-271701-tx0lqgff 152 26 the the DT cord-271701-tx0lqgff 152 27 generally generally RB cord-271701-tx0lqgff 152 28 unpredictable unpredictable JJ cord-271701-tx0lqgff 152 29 migration migration NN cord-271701-tx0lqgff 152 30 behaviour behaviour NN cord-271701-tx0lqgff 152 31 of of IN cord-271701-tx0lqgff 152 32 proteins protein NNS cord-271701-tx0lqgff 152 33 and and CC cord-271701-tx0lqgff 152 34 RNPs rnp NNS cord-271701-tx0lqgff 152 35 in in IN cord-271701-tx0lqgff 152 36 native native JJ cord-271701-tx0lqgff 152 37 PAGE page NN cord-271701-tx0lqgff 152 38 , , , cord-271701-tx0lqgff 152 39 it -PRON- PRP cord-271701-tx0lqgff 152 40 was be VBD cord-271701-tx0lqgff 152 41 not not RB cord-271701-tx0lqgff 152 42 possible possible JJ cord-271701-tx0lqgff 152 43 to to TO cord-271701-tx0lqgff 152 44 assess assess VB cord-271701-tx0lqgff 152 45 whether whether IN cord-271701-tx0lqgff 152 46 this this DT cord-271701-tx0lqgff 152 47 band band NN cord-271701-tx0lqgff 152 48 indeed indeed RB cord-271701-tx0lqgff 152 49 corresponded correspond VBD cord-271701-tx0lqgff 152 50 to to IN cord-271701-tx0lqgff 152 51 the the DT cord-271701-tx0lqgff 152 52 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 152 53 + + SYM cord-271701-tx0lqgff 152 54 8 8 CD cord-271701-tx0lqgff 152 55 ) ) -RRB- cord-271701-tx0lqgff 152 56 hexadecamer hexadecamer NN cord-271701-tx0lqgff 152 57 . . . cord-271701-tx0lqgff 153 1 The the DT cord-271701-tx0lqgff 153 2 K K NNP cord-271701-tx0lqgff 153 3 d d NN cord-271701-tx0lqgff 153 4 of of IN cord-271701-tx0lqgff 153 5 the the DT cord-271701-tx0lqgff 153 6 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 153 7 + + SYM cord-271701-tx0lqgff 153 8 8 8 CD cord-271701-tx0lqgff 153 9 ) ) -RRB- cord-271701-tx0lqgff 153 10 complex complex NN cord-271701-tx0lqgff 153 11 was be VBD cord-271701-tx0lqgff 153 12 estimated estimate VBN cord-271701-tx0lqgff 153 13 at at IN cord-271701-tx0lqgff 153 14 $ $ $ cord-271701-tx0lqgff 153 15 1.2 1.2 CD cord-271701-tx0lqgff 153 16 mM mm CD cord-271701-tx0lqgff 153 17 , , , cord-271701-tx0lqgff 153 18 about about RB cord-271701-tx0lqgff 153 19 3-fold 3-fold CD cord-271701-tx0lqgff 153 20 lower low JJR cord-271701-tx0lqgff 153 21 than than IN cord-271701-tx0lqgff 153 22 that that DT cord-271701-tx0lqgff 153 23 of of IN cord-271701-tx0lqgff 153 24 nsp8 nsp8 NN cord-271701-tx0lqgff 153 25 alone alone JJ cord-271701-tx0lqgff 154 1 ( ( -LRB- cord-271701-tx0lqgff 154 2 Figure Figure NNP cord-271701-tx0lqgff 154 3 3F 3F NNP cord-271701-tx0lqgff 154 4 ) ) -RRB- cord-271701-tx0lqgff 154 5 . . . cord-271701-tx0lqgff 155 1 When when WRB cord-271701-tx0lqgff 155 2 we -PRON- PRP cord-271701-tx0lqgff 155 3 next next RB cord-271701-tx0lqgff 155 4 added add VBD cord-271701-tx0lqgff 155 5 an an DT cord-271701-tx0lqgff 155 6 equimolar equimolar JJ cord-271701-tx0lqgff 155 7 amount amount NN cord-271701-tx0lqgff 155 8 of of IN cord-271701-tx0lqgff 155 9 nsp7 nsp7 NN cord-271701-tx0lqgff 155 10 to to IN cord-271701-tx0lqgff 155 11 the the DT cord-271701-tx0lqgff 155 12 nsp8 nsp8 NNP cord-271701-tx0lqgff 155 13 RNA RNA NNP cord-271701-tx0lqgff 155 14 - - HYPH cord-271701-tx0lqgff 155 15 binding bind VBG cord-271701-tx0lqgff 155 16 mutant mutant JJ cord-271701-tx0lqgff 155 17 K58A k58a NN cord-271701-tx0lqgff 155 18 , , , cord-271701-tx0lqgff 155 19 we -PRON- PRP cord-271701-tx0lqgff 155 20 observed observe VBD cord-271701-tx0lqgff 155 21 a a DT cord-271701-tx0lqgff 155 22 minor minor JJ cord-271701-tx0lqgff 155 23 increase increase NN cord-271701-tx0lqgff 155 24 in in IN cord-271701-tx0lqgff 155 25 the the DT cord-271701-tx0lqgff 155 26 binding bind VBG cord-271701-tx0lqgff 155 27 affinity affinity NN cord-271701-tx0lqgff 155 28 for for IN cord-271701-tx0lqgff 155 29 RNA RNA NNP cord-271701-tx0lqgff 155 30 ( ( -LRB- cord-271701-tx0lqgff 155 31 compare compare VB cord-271701-tx0lqgff 155 32 Figure figure NN cord-271701-tx0lqgff 155 33 3B 3b NN cord-271701-tx0lqgff 155 34 with with IN cord-271701-tx0lqgff 155 35 3E 3E NNP cord-271701-tx0lqgff 155 36 ) ) -RRB- cord-271701-tx0lqgff 155 37 . . . cord-271701-tx0lqgff 156 1 Mutant mutant JJ cord-271701-tx0lqgff 156 2 D52A d52a RB cord-271701-tx0lqgff 156 3 , , , cord-271701-tx0lqgff 156 4 on on IN cord-271701-tx0lqgff 156 5 the the DT cord-271701-tx0lqgff 156 6 other other JJ cord-271701-tx0lqgff 156 7 hand hand NN cord-271701-tx0lqgff 156 8 , , , cord-271701-tx0lqgff 156 9 behaved behave VBD cord-271701-tx0lqgff 156 10 similar similar JJ cord-271701-tx0lqgff 156 11 to to IN cord-271701-tx0lqgff 156 12 the the DT cord-271701-tx0lqgff 156 13 wild wild JJ cord-271701-tx0lqgff 156 14 - - HYPH cord-271701-tx0lqgff 156 15 type type NN cord-271701-tx0lqgff 156 16 protein protein NN cord-271701-tx0lqgff 156 17 ( ( -LRB- cord-271701-tx0lqgff 156 18 Figure Figure NNP cord-271701-tx0lqgff 156 19 3E 3e NN cord-271701-tx0lqgff 156 20 ) ) -RRB- cord-271701-tx0lqgff 156 21 . . . cord-271701-tx0lqgff 157 1 Together together RB cord-271701-tx0lqgff 157 2 , , , cord-271701-tx0lqgff 157 3 these these DT cord-271701-tx0lqgff 157 4 results result NNS cord-271701-tx0lqgff 157 5 complement complement VBP cord-271701-tx0lqgff 157 6 the the DT cord-271701-tx0lqgff 157 7 observation observation NN cord-271701-tx0lqgff 157 8 that that IN cord-271701-tx0lqgff 157 9 various various JJ cord-271701-tx0lqgff 157 10 positively positively RB cord-271701-tx0lqgff 157 11 charged charge VBN cord-271701-tx0lqgff 157 12 nsp7 nsp7 JJ cord-271701-tx0lqgff 157 13 residues residue NNS cord-271701-tx0lqgff 157 14 line line VBP cord-271701-tx0lqgff 157 15 the the DT cord-271701-tx0lqgff 157 16 inside inside NN cord-271701-tx0lqgff 157 17 of of IN cord-271701-tx0lqgff 157 18 the the DT cord-271701-tx0lqgff 157 19 nsp8-scaffolded nsp8-scaffolded NNP cord-271701-tx0lqgff 157 20 RNA RNA NNP cord-271701-tx0lqgff 157 21 binding bind VBG cord-271701-tx0lqgff 157 22 channel channel NN cord-271701-tx0lqgff 157 23 ( ( -LRB- cord-271701-tx0lqgff 157 24 13 13 CD cord-271701-tx0lqgff 157 25 ) ) -RRB- cord-271701-tx0lqgff 157 26 , , , cord-271701-tx0lqgff 157 27 and and CC cord-271701-tx0lqgff 157 28 they -PRON- PRP cord-271701-tx0lqgff 157 29 provide provide VBP cord-271701-tx0lqgff 157 30 the the DT cord-271701-tx0lqgff 157 31 first first JJ cord-271701-tx0lqgff 157 32 direct direct JJ cord-271701-tx0lqgff 157 33 evidence evidence NN cord-271701-tx0lqgff 157 34 for for IN cord-271701-tx0lqgff 157 35 a a DT cord-271701-tx0lqgff 157 36 functional functional JJ cord-271701-tx0lqgff 157 37 role role NN cord-271701-tx0lqgff 157 38 of of IN cord-271701-tx0lqgff 157 39 nsp7 nsp7 NN cord-271701-tx0lqgff 157 40 in in IN cord-271701-tx0lqgff 157 41 the the DT cord-271701-tx0lqgff 157 42 SARS SARS NNP cord-271701-tx0lqgff 157 43 - - HYPH cord-271701-tx0lqgff 157 44 CoV CoV NNP cord-271701-tx0lqgff 157 45 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 157 46 + + SYM cord-271701-tx0lqgff 157 47 8 8 CD cord-271701-tx0lqgff 157 48 ) ) -RRB- cord-271701-tx0lqgff 157 49 structure structure NN cord-271701-tx0lqgff 157 50 . . . cord-271701-tx0lqgff 157 51 _SP cord-271701-tx0lqgff 158 1 Given give VBN cord-271701-tx0lqgff 158 2 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 158 3 + + SYM cord-271701-tx0lqgff 158 4 8 8 CD cord-271701-tx0lqgff 158 5 ) ) -RRB- cord-271701-tx0lqgff 158 6 's 's POS cord-271701-tx0lqgff 158 7 ability ability NN cord-271701-tx0lqgff 158 8 to to TO cord-271701-tx0lqgff 158 9 bind bind VB cord-271701-tx0lqgff 158 10 dsRNA dsrna NN cord-271701-tx0lqgff 158 11 , , , cord-271701-tx0lqgff 158 12 we -PRON- PRP cord-271701-tx0lqgff 158 13 wondered wonder VBD cord-271701-tx0lqgff 158 14 whether whether IN cord-271701-tx0lqgff 158 15 this this DT cord-271701-tx0lqgff 158 16 protein protein NN cord-271701-tx0lqgff 158 17 complex complex NN cord-271701-tx0lqgff 158 18 would would MD cord-271701-tx0lqgff 158 19 also also RB cord-271701-tx0lqgff 158 20 be be VB cord-271701-tx0lqgff 158 21 catalytically catalytically RB cord-271701-tx0lqgff 158 22 active active JJ cord-271701-tx0lqgff 158 23 on on IN cord-271701-tx0lqgff 158 24 this this DT cord-271701-tx0lqgff 158 25 type type NN cord-271701-tx0lqgff 158 26 of of IN cord-271701-tx0lqgff 158 27 template template NN cord-271701-tx0lqgff 158 28 and and CC cord-271701-tx0lqgff 158 29 able able JJ cord-271701-tx0lqgff 158 30 to to TO cord-271701-tx0lqgff 158 31 incorporate incorporate VB cord-271701-tx0lqgff 158 32 nucleoside nucleoside NN cord-271701-tx0lqgff 158 33 monophosphates monophosphate NNS cord-271701-tx0lqgff 158 34 ( ( -LRB- cord-271701-tx0lqgff 158 35 NMPs NMPs NNP cord-271701-tx0lqgff 158 36 ) ) -RRB- cord-271701-tx0lqgff 158 37 into into IN cord-271701-tx0lqgff 158 38 partially partially RB cord-271701-tx0lqgff 158 39 double double RB cord-271701-tx0lqgff 158 40 - - HYPH cord-271701-tx0lqgff 158 41 stranded strand VBN cord-271701-tx0lqgff 158 42 RNA RNA NNP cord-271701-tx0lqgff 158 43 molecules molecule NNS cord-271701-tx0lqgff 158 44 , , , cord-271701-tx0lqgff 158 45 i.e. i.e. FW cord-271701-tx0lqgff 158 46 primed prime VBN cord-271701-tx0lqgff 158 47 templates template NNS cord-271701-tx0lqgff 158 48 . . . cord-271701-tx0lqgff 159 1 We -PRON- PRP cord-271701-tx0lqgff 159 2 therefore therefore RB cord-271701-tx0lqgff 159 3 examined examine VBD cord-271701-tx0lqgff 159 4 the the DT cord-271701-tx0lqgff 159 5 ability ability NN cord-271701-tx0lqgff 159 6 of of IN cord-271701-tx0lqgff 159 7 nsp8 nsp8 NN cord-271701-tx0lqgff 159 8 to to TO cord-271701-tx0lqgff 159 9 extend extend VB cord-271701-tx0lqgff 159 10 a a DT cord-271701-tx0lqgff 159 11 20-nt 20-nt CD cord-271701-tx0lqgff 159 12 primer primer NN cord-271701-tx0lqgff 159 13 that that WDT cord-271701-tx0lqgff 159 14 was be VBD cord-271701-tx0lqgff 159 15 pre pre VBN cord-271701-tx0lqgff 159 16 - - VBN cord-271701-tx0lqgff 159 17 annealed anneal VBN cord-271701-tx0lqgff 159 18 to to IN cord-271701-tx0lqgff 159 19 a a DT cord-271701-tx0lqgff 159 20 heteromeric heteromeric JJ cord-271701-tx0lqgff 159 21 template template NN cord-271701-tx0lqgff 159 22 with with IN cord-271701-tx0lqgff 159 23 relatively relatively RB cord-271701-tx0lqgff 159 24 low low JJ cord-271701-tx0lqgff 159 25 secondary secondary JJ cord-271701-tx0lqgff 159 26 structure structure NN cord-271701-tx0lqgff 159 27 , , , cord-271701-tx0lqgff 159 28 to to TO cord-271701-tx0lqgff 159 29 rule rule VB cord-271701-tx0lqgff 159 30 out out RP cord-271701-tx0lqgff 159 31 potential potential JJ cord-271701-tx0lqgff 159 32 adverse adverse JJ cord-271701-tx0lqgff 159 33 effects effect NNS cord-271701-tx0lqgff 159 34 of of IN cord-271701-tx0lqgff 159 35 hairpins hairpin NNS cord-271701-tx0lqgff 159 36 ( ( -LRB- cord-271701-tx0lqgff 159 37 Figure figure NN cord-271701-tx0lqgff 159 38 4A 4a CD cord-271701-tx0lqgff 159 39 ) ) -RRB- cord-271701-tx0lqgff 159 40 . . . cord-271701-tx0lqgff 160 1 Interestingly interestingly RB cord-271701-tx0lqgff 160 2 and and CC cord-271701-tx0lqgff 160 3 in in IN cord-271701-tx0lqgff 160 4 contrast contrast NN cord-271701-tx0lqgff 160 5 to to IN cord-271701-tx0lqgff 160 6 previous previous JJ cord-271701-tx0lqgff 160 7 observations observation NNS cord-271701-tx0lqgff 160 8 ( ( -LRB- cord-271701-tx0lqgff 160 9 12 12 CD cord-271701-tx0lqgff 160 10 ) ) -RRB- cord-271701-tx0lqgff 160 11 , , , cord-271701-tx0lqgff 160 12 the the DT cord-271701-tx0lqgff 160 13 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 160 14 + + SYM cord-271701-tx0lqgff 160 15 8 8 CD cord-271701-tx0lqgff 160 16 ) ) -RRB- cord-271701-tx0lqgff 160 17 complex complex NN cord-271701-tx0lqgff 160 18 readily readily RB cord-271701-tx0lqgff 160 19 extended extend VBD cord-271701-tx0lqgff 160 20 the the DT cord-271701-tx0lqgff 160 21 primer primer NN cord-271701-tx0lqgff 160 22 up up RP cord-271701-tx0lqgff 160 23 to to IN cord-271701-tx0lqgff 160 24 template template NN cord-271701-tx0lqgff 160 25 length length NN cord-271701-tx0lqgff 160 26 , , , cord-271701-tx0lqgff 160 27 resulting result VBG cord-271701-tx0lqgff 160 28 in in IN cord-271701-tx0lqgff 160 29 the the DT cord-271701-tx0lqgff 160 30 formation formation NN cord-271701-tx0lqgff 160 31 of of IN cord-271701-tx0lqgff 160 32 a a DT cord-271701-tx0lqgff 160 33 40-base 40-base CD cord-271701-tx0lqgff 160 34 pair pair NN cord-271701-tx0lqgff 160 35 RNA RNA NNP cord-271701-tx0lqgff 160 36 duplex duplex NN cord-271701-tx0lqgff 160 37 ( ( -LRB- cord-271701-tx0lqgff 160 38 Figure figure NN cord-271701-tx0lqgff 160 39 4B 4b NN cord-271701-tx0lqgff 160 40 ) ) -RRB- cord-271701-tx0lqgff 160 41 . . . cord-271701-tx0lqgff 161 1 The the DT cord-271701-tx0lqgff 161 2 negatively negatively RB cord-271701-tx0lqgff 161 3 charged charge VBN cord-271701-tx0lqgff 161 4 and and CC cord-271701-tx0lqgff 161 5 helical helical JJ cord-271701-tx0lqgff 161 6 polymer polymer NN cord-271701-tx0lqgff 161 7 heparin heparin NN cord-271701-tx0lqgff 161 8 is be VBZ cord-271701-tx0lqgff 161 9 able able JJ cord-271701-tx0lqgff 161 10 to to TO cord-271701-tx0lqgff 161 11 occupy occupy VB cord-271701-tx0lqgff 161 12 the the DT cord-271701-tx0lqgff 161 13 binding bind VBG cord-271701-tx0lqgff 161 14 sites site NNS cord-271701-tx0lqgff 161 15 of of IN cord-271701-tx0lqgff 161 16 RNA RNA NNP cord-271701-tx0lqgff 161 17 and and CC cord-271701-tx0lqgff 161 18 DNA DNA NNP cord-271701-tx0lqgff 161 19 polymerases polymerase NNS cord-271701-tx0lqgff 161 20 , , , cord-271701-tx0lqgff 161 21 and and CC cord-271701-tx0lqgff 161 22 can can MD cord-271701-tx0lqgff 161 23 thus thus RB cord-271701-tx0lqgff 161 24 directly directly RB cord-271701-tx0lqgff 161 25 compete compete VB cord-271701-tx0lqgff 161 26 with with IN cord-271701-tx0lqgff 161 27 RNA RNA NNP cord-271701-tx0lqgff 161 28 and and CC cord-271701-tx0lqgff 161 29 DNA DNA NNP cord-271701-tx0lqgff 161 30 templates template NNS cord-271701-tx0lqgff 161 31 . . . cord-271701-tx0lqgff 162 1 To to TO cord-271701-tx0lqgff 162 2 verify verify VB cord-271701-tx0lqgff 162 3 that that IN cord-271701-tx0lqgff 162 4 the the DT cord-271701-tx0lqgff 162 5 full full JJ cord-271701-tx0lqgff 162 6 - - HYPH cord-271701-tx0lqgff 162 7 length length NN cord-271701-tx0lqgff 162 8 and and CC cord-271701-tx0lqgff 162 9 longer long JJR cord-271701-tx0lqgff 162 10 RNA RNA NNP cord-271701-tx0lqgff 162 11 products product NNS cord-271701-tx0lqgff 162 12 were be VBD cord-271701-tx0lqgff 162 13 derived derive VBN cord-271701-tx0lqgff 162 14 from from IN cord-271701-tx0lqgff 162 15 single single JJ cord-271701-tx0lqgff 162 16 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 162 17 + + SYM cord-271701-tx0lqgff 162 18 8 8 CD cord-271701-tx0lqgff 162 19 ) ) -RRB- cord-271701-tx0lqgff 162 20 complexes complex NNS cord-271701-tx0lqgff 162 21 bound bind VBN cord-271701-tx0lqgff 162 22 to to IN cord-271701-tx0lqgff 162 23 the the DT cord-271701-tx0lqgff 162 24 template template NN cord-271701-tx0lqgff 162 25 ( ( -LRB- cord-271701-tx0lqgff 162 26 i.e. i.e. FW cord-271701-tx0lqgff 162 27 from from IN cord-271701-tx0lqgff 162 28 a a DT cord-271701-tx0lqgff 162 29 processive processive JJ cord-271701-tx0lqgff 162 30 activity activity NN cord-271701-tx0lqgff 162 31 ) ) -RRB- cord-271701-tx0lqgff 162 32 , , , cord-271701-tx0lqgff 162 33 and and CC cord-271701-tx0lqgff 162 34 not not RB cord-271701-tx0lqgff 162 35 from from IN cord-271701-tx0lqgff 162 36 multiple multiple JJ cord-271701-tx0lqgff 162 37 binding binding NN cord-271701-tx0lqgff 162 38 and and CC cord-271701-tx0lqgff 162 39 extension extension NN cord-271701-tx0lqgff 162 40 events event NNS cord-271701-tx0lqgff 162 41 ( ( -LRB- cord-271701-tx0lqgff 162 42 i.e. i.e. FW cord-271701-tx0lqgff 162 43 a a DT cord-271701-tx0lqgff 162 44 distributive distributive JJ cord-271701-tx0lqgff 162 45 activity activity NN cord-271701-tx0lqgff 162 46 ) ) -RRB- cord-271701-tx0lqgff 162 47 , , , cord-271701-tx0lqgff 162 48 we -PRON- PRP cord-271701-tx0lqgff 162 49 performed perform VBD cord-271701-tx0lqgff 162 50 the the DT cord-271701-tx0lqgff 162 51 primer primer NN cord-271701-tx0lqgff 162 52 extension extension NN cord-271701-tx0lqgff 162 53 reaction reaction NN cord-271701-tx0lqgff 162 54 in in IN cord-271701-tx0lqgff 162 55 the the DT cord-271701-tx0lqgff 162 56 presence presence NN cord-271701-tx0lqgff 162 57 of of IN cord-271701-tx0lqgff 162 58 heparin heparin NN cord-271701-tx0lqgff 162 59 to to TO cord-271701-tx0lqgff 162 60 trap trap VB cord-271701-tx0lqgff 162 61 any any DT cord-271701-tx0lqgff 162 62 unbound unbound JJ cord-271701-tx0lqgff 162 63 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 162 64 + + SYM cord-271701-tx0lqgff 162 65 8 8 CD cord-271701-tx0lqgff 162 66 ) ) -RRB- cord-271701-tx0lqgff 162 67 . . . cord-271701-tx0lqgff 163 1 We -PRON- PRP cord-271701-tx0lqgff 163 2 first first RB cord-271701-tx0lqgff 163 3 tested test VBD cord-271701-tx0lqgff 163 4 the the DT cord-271701-tx0lqgff 163 5 concentration concentration NN cord-271701-tx0lqgff 163 6 required require VBN cord-271701-tx0lqgff 163 7 to to TO cord-271701-tx0lqgff 163 8 saturate saturate VB cord-271701-tx0lqgff 163 9 all all DT cord-271701-tx0lqgff 163 10 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 163 11 + + SYM cord-271701-tx0lqgff 163 12 8 8 CD cord-271701-tx0lqgff 163 13 ) ) -RRB- cord-271701-tx0lqgff 163 14 complexes complex NNS cord-271701-tx0lqgff 163 15 in in IN cord-271701-tx0lqgff 163 16 the the DT cord-271701-tx0lqgff 163 17 reaction reaction NN cord-271701-tx0lqgff 163 18 by by IN cord-271701-tx0lqgff 163 19 titrating titrate VBG cord-271701-tx0lqgff 163 20 0 0 CD cord-271701-tx0lqgff 163 21 - - SYM cord-271701-tx0lqgff 163 22 100 100 CD cord-271701-tx0lqgff 163 23 mM mm CD cord-271701-tx0lqgff 163 24 into into IN cord-271701-tx0lqgff 163 25 the the DT cord-271701-tx0lqgff 163 26 reaction reaction NN cord-271701-tx0lqgff 163 27 ( ( -LRB- cord-271701-tx0lqgff 163 28 Supplementary Supplementary NNP cord-271701-tx0lqgff 163 29 Figure figure NN cord-271701-tx0lqgff 163 30 S2A s2a NN cord-271701-tx0lqgff 163 31 ) ) -RRB- cord-271701-tx0lqgff 163 32 and and CC cord-271701-tx0lqgff 163 33 observed observe VBD cord-271701-tx0lqgff 163 34 that that IN cord-271701-tx0lqgff 163 35 the the DT cord-271701-tx0lqgff 163 36 incorporation incorporation NN cord-271701-tx0lqgff 163 37 levels level NNS cord-271701-tx0lqgff 163 38 were be VBD cord-271701-tx0lqgff 163 39 stable stable JJ cord-271701-tx0lqgff 163 40 above above IN cord-271701-tx0lqgff 163 41 1 1 CD cord-271701-tx0lqgff 163 42 mM mm CD cord-271701-tx0lqgff 163 43 ( ( -LRB- cord-271701-tx0lqgff 163 44 Supplementary Supplementary NNP cord-271701-tx0lqgff 163 45 Figure Figure NNP cord-271701-tx0lqgff 163 46 S2B S2B NNP cord-271701-tx0lqgff 163 47 ) ) -RRB- cord-271701-tx0lqgff 163 48 , , , cord-271701-tx0lqgff 163 49 suggesting suggest VBG cord-271701-tx0lqgff 163 50 that that IN cord-271701-tx0lqgff 163 51 these these DT cord-271701-tx0lqgff 163 52 reactions reaction NNS cord-271701-tx0lqgff 163 53 represent represent VBP cord-271701-tx0lqgff 163 54 single single JJ cord-271701-tx0lqgff 163 55 initiation initiation NN cord-271701-tx0lqgff 163 56 - - HYPH cord-271701-tx0lqgff 163 57 extension extension NN cord-271701-tx0lqgff 163 58 events event NNS cord-271701-tx0lqgff 163 59 . . . cord-271701-tx0lqgff 164 1 We -PRON- PRP cord-271701-tx0lqgff 164 2 next next RB cord-271701-tx0lqgff 164 3 assessed assess VBD cord-271701-tx0lqgff 164 4 whether whether IN cord-271701-tx0lqgff 164 5 the the DT cord-271701-tx0lqgff 164 6 activity activity NN cord-271701-tx0lqgff 164 7 of of IN cord-271701-tx0lqgff 164 8 nsp8 nsp8 NN cord-271701-tx0lqgff 164 9 or or CC cord-271701-tx0lqgff 164 10 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 164 11 + + SYM cord-271701-tx0lqgff 164 12 8 8 CD cord-271701-tx0lqgff 164 13 ) ) -RRB- cord-271701-tx0lqgff 164 14 was be VBD cord-271701-tx0lqgff 164 15 distributive distributive JJ cord-271701-tx0lqgff 164 16 or or CC cord-271701-tx0lqgff 164 17 processive processive JJ cord-271701-tx0lqgff 164 18 by by IN cord-271701-tx0lqgff 164 19 quantifying quantify VBG cord-271701-tx0lqgff 164 20 the the DT cord-271701-tx0lqgff 164 21 incorporated incorporate VBN cord-271701-tx0lqgff 164 22 signal signal NN cord-271701-tx0lqgff 164 23 in in IN cord-271701-tx0lqgff 164 24 full full JJ cord-271701-tx0lqgff 164 25 - - HYPH cord-271701-tx0lqgff 164 26 length length NN cord-271701-tx0lqgff 164 27 or or CC cord-271701-tx0lqgff 164 28 longer long JJR cord-271701-tx0lqgff 164 29 products product NNS cord-271701-tx0lqgff 164 30 in in IN cord-271701-tx0lqgff 164 31 the the DT cord-271701-tx0lqgff 164 32 presence presence NN cord-271701-tx0lqgff 164 33 of of IN cord-271701-tx0lqgff 164 34 1 1 CD cord-271701-tx0lqgff 164 35 mM mm CD cord-271701-tx0lqgff 164 36 heparin heparin JJ cord-271701-tx0lqgff 165 1 ( ( -LRB- cord-271701-tx0lqgff 165 2 Figure figure NN cord-271701-tx0lqgff 165 3 4C 4c CD cord-271701-tx0lqgff 165 4 ) ) -RRB- cord-271701-tx0lqgff 165 5 . . . cord-271701-tx0lqgff 166 1 As as IN cord-271701-tx0lqgff 166 2 shown show VBN cord-271701-tx0lqgff 166 3 in in IN cord-271701-tx0lqgff 166 4 Figure Figure NNP cord-271701-tx0lqgff 166 5 4D 4d CD cord-271701-tx0lqgff 166 6 , , , cord-271701-tx0lqgff 166 7 66 66 CD cord-271701-tx0lqgff 166 8 ± ± CD cord-271701-tx0lqgff 166 9 4 4 CD cord-271701-tx0lqgff 166 10 % % NN cord-271701-tx0lqgff 166 11 ( ( -LRB- cord-271701-tx0lqgff 166 12 mean mean VB cord-271701-tx0lqgff 166 13 ± ± NNP cord-271701-tx0lqgff 166 14 standard standard JJ cord-271701-tx0lqgff 166 15 deviation deviation NN cord-271701-tx0lqgff 166 16 ) ) -RRB- cord-271701-tx0lqgff 166 17 of of IN cord-271701-tx0lqgff 166 18 the the DT cord-271701-tx0lqgff 166 19 nsp8 nsp8 JJ cord-271701-tx0lqgff 166 20 products product NNS cord-271701-tx0lqgff 166 21 were be VBD cord-271701-tx0lqgff 166 22 full full JJ cord-271701-tx0lqgff 166 23 length length NN cord-271701-tx0lqgff 166 24 compared compare VBN cord-271701-tx0lqgff 166 25 to to IN cord-271701-tx0lqgff 166 26 61 61 CD cord-271701-tx0lqgff 166 27 ± ± CD cord-271701-tx0lqgff 166 28 2 2 CD cord-271701-tx0lqgff 166 29 % % NN cord-271701-tx0lqgff 166 30 of of IN cord-271701-tx0lqgff 166 31 the the DT cord-271701-tx0lqgff 166 32 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 166 33 + + SYM cord-271701-tx0lqgff 166 34 8 8 CD cord-271701-tx0lqgff 166 35 ) ) -RRB- cord-271701-tx0lqgff 166 36 products product NNS cord-271701-tx0lqgff 166 37 , , , cord-271701-tx0lqgff 166 38 suggesting suggest VBG cord-271701-tx0lqgff 166 39 that that IN cord-271701-tx0lqgff 166 40 both both CC cord-271701-tx0lqgff 166 41 the the DT cord-271701-tx0lqgff 166 42 enzymes enzyme NNS cord-271701-tx0lqgff 166 43 complexes complex NNS cord-271701-tx0lqgff 166 44 are be VBP cord-271701-tx0lqgff 166 45 mostly mostly RB cord-271701-tx0lqgff 166 46 processive processive JJ cord-271701-tx0lqgff 166 47 and and CC cord-271701-tx0lqgff 166 48 that that IN cord-271701-tx0lqgff 166 49 nsp7 nsp7 NNP cord-271701-tx0lqgff 166 50 does do VBZ cord-271701-tx0lqgff 166 51 not not RB cord-271701-tx0lqgff 166 52 confer confer VB cord-271701-tx0lqgff 166 53 additional additional JJ cord-271701-tx0lqgff 166 54 processivity processivity NN cord-271701-tx0lqgff 166 55 to to IN cord-271701-tx0lqgff 166 56 nsp8 nsp8 NN cord-271701-tx0lqgff 166 57 . . . cord-271701-tx0lqgff 167 1 Interestingly interestingly RB cord-271701-tx0lqgff 167 2 , , , cord-271701-tx0lqgff 167 3 both both CC cord-271701-tx0lqgff 167 4 nsp8 nsp8 NN cord-271701-tx0lqgff 167 5 and and CC cord-271701-tx0lqgff 167 6 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 167 7 + + SYM cord-271701-tx0lqgff 167 8 8 8 CD cord-271701-tx0lqgff 167 9 ) ) -RRB- cord-271701-tx0lqgff 167 10 are be VBP cord-271701-tx0lqgff 167 11 able able JJ cord-271701-tx0lqgff 167 12 to to TO cord-271701-tx0lqgff 167 13 extend extend VB cord-271701-tx0lqgff 167 14 the the DT cord-271701-tx0lqgff 167 15 RNA RNA NNP cord-271701-tx0lqgff 167 16 primers primer NNS cord-271701-tx0lqgff 167 17 beyond beyond IN cord-271701-tx0lqgff 167 18 template template NN cord-271701-tx0lqgff 167 19 length length NN cord-271701-tx0lqgff 167 20 in in IN cord-271701-tx0lqgff 167 21 the the DT cord-271701-tx0lqgff 167 22 presence presence NN cord-271701-tx0lqgff 167 23 of of IN cord-271701-tx0lqgff 167 24 heparin heparin NN cord-271701-tx0lqgff 167 25 ( ( -LRB- cord-271701-tx0lqgff 167 26 Figure Figure NNP cord-271701-tx0lqgff 167 27 4D 4D NNP cord-271701-tx0lqgff 167 28 and and CC cord-271701-tx0lqgff 167 29 Supplementary Supplementary NNP cord-271701-tx0lqgff 167 30 Figure Figure NNP cord-271701-tx0lqgff 167 31 S2B S2B NNP cord-271701-tx0lqgff 167 32 ) ) -RRB- cord-271701-tx0lqgff 167 33 , , , cord-271701-tx0lqgff 167 34 suggesting suggest VBG cord-271701-tx0lqgff 167 35 that that IN cord-271701-tx0lqgff 167 36 these these DT cord-271701-tx0lqgff 167 37 extensions extension NNS cord-271701-tx0lqgff 167 38 result result VBP cord-271701-tx0lqgff 167 39 from from IN cord-271701-tx0lqgff 167 40 terminal terminal JJ cord-271701-tx0lqgff 167 41 transferase transferase NN cord-271701-tx0lqgff 167 42 activity activity NN cord-271701-tx0lqgff 167 43 and and CC cord-271701-tx0lqgff 167 44 not not RB cord-271701-tx0lqgff 167 45 from from IN cord-271701-tx0lqgff 167 46 template template NN cord-271701-tx0lqgff 167 47 switching switching NN cord-271701-tx0lqgff 167 48 , , , cord-271701-tx0lqgff 167 49 as as IN cord-271701-tx0lqgff 167 50 was be VBD cord-271701-tx0lqgff 167 51 previously previously RB cord-271701-tx0lqgff 167 52 observed observe VBN cord-271701-tx0lqgff 167 53 for for IN cord-271701-tx0lqgff 167 54 poliovirus poliovirus NN cord-271701-tx0lqgff 167 55 3D 3D NNP cord-271701-tx0lqgff 167 56 pol pol NN cord-271701-tx0lqgff 167 57 ( ( -LRB- cord-271701-tx0lqgff 167 58 20 20 CD cord-271701-tx0lqgff 167 59 ) ) -RRB- cord-271701-tx0lqgff 167 60 . . . cord-271701-tx0lqgff 168 1 Intrigued intrigue VBN cord-271701-tx0lqgff 168 2 by by IN cord-271701-tx0lqgff 168 3 the the DT cord-271701-tx0lqgff 168 4 primer primer NN cord-271701-tx0lqgff 168 5 extension extension NN cord-271701-tx0lqgff 168 6 activity activity NN cord-271701-tx0lqgff 168 7 of of IN cord-271701-tx0lqgff 168 8 the the DT cord-271701-tx0lqgff 168 9 SARS SARS NNP cord-271701-tx0lqgff 168 10 - - HYPH cord-271701-tx0lqgff 168 11 CoV CoV NNP cord-271701-tx0lqgff 168 12 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 168 13 + + SYM cord-271701-tx0lqgff 168 14 8 8 CD cord-271701-tx0lqgff 168 15 ) ) -RRB- cord-271701-tx0lqgff 168 16 complex complex NN cord-271701-tx0lqgff 168 17 described describe VBN cord-271701-tx0lqgff 168 18 above above RB cord-271701-tx0lqgff 168 19 , , , cord-271701-tx0lqgff 168 20 we -PRON- PRP cord-271701-tx0lqgff 168 21 next next RB cord-271701-tx0lqgff 168 22 designed design VBD cord-271701-tx0lqgff 168 23 a a DT cord-271701-tx0lqgff 168 24 set set NN cord-271701-tx0lqgff 168 25 of of IN cord-271701-tx0lqgff 168 26 mutations mutation NNS cord-271701-tx0lqgff 168 27 to to TO cord-271701-tx0lqgff 168 28 verify verify VB cord-271701-tx0lqgff 168 29 that that IN cord-271701-tx0lqgff 168 30 the the DT cord-271701-tx0lqgff 168 31 activity activity NN cord-271701-tx0lqgff 168 32 indeed indeed RB cord-271701-tx0lqgff 168 33 was be VBD cord-271701-tx0lqgff 168 34 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 168 35 + + SYM cord-271701-tx0lqgff 168 36 8 8 CD cord-271701-tx0lqgff 168 37 ) ) -RRB- cord-271701-tx0lqgff 168 38 derived derive VBN cord-271701-tx0lqgff 168 39 and and CC cord-271701-tx0lqgff 168 40 to to TO cord-271701-tx0lqgff 168 41 identify identify VB cord-271701-tx0lqgff 168 42 the the DT cord-271701-tx0lqgff 168 43 most most RBS cord-271701-tx0lqgff 168 44 critical critical JJ cord-271701-tx0lqgff 168 45 residues residue NNS cord-271701-tx0lqgff 168 46 for for IN cord-271701-tx0lqgff 168 47 activity activity NN cord-271701-tx0lqgff 168 48 in in IN cord-271701-tx0lqgff 168 49 the the DT cord-271701-tx0lqgff 168 50 complex complex NN cord-271701-tx0lqgff 168 51 . . . cord-271701-tx0lqgff 169 1 We -PRON- PRP cord-271701-tx0lqgff 169 2 first first RB cord-271701-tx0lqgff 169 3 tested test VBD cord-271701-tx0lqgff 169 4 RNA RNA NNP cord-271701-tx0lqgff 169 5 - - HYPH cord-271701-tx0lqgff 169 6 binding bind VBG cord-271701-tx0lqgff 169 7 mutant mutant JJ cord-271701-tx0lqgff 169 8 K58A k58a NN cord-271701-tx0lqgff 169 9 ( ( -LRB- cord-271701-tx0lqgff 169 10 Figure figure NN cord-271701-tx0lqgff 169 11 2 2 CD cord-271701-tx0lqgff 169 12 ) ) -RRB- cord-271701-tx0lqgff 169 13 at at IN cord-271701-tx0lqgff 169 14 varying vary VBG cord-271701-tx0lqgff 169 15 concentrations concentration NNS cord-271701-tx0lqgff 169 16 and and CC cord-271701-tx0lqgff 169 17 observed observe VBD cord-271701-tx0lqgff 169 18 a a DT cord-271701-tx0lqgff 169 19 $ $ $ cord-271701-tx0lqgff 169 20 95 95 CD cord-271701-tx0lqgff 169 21 % % NN cord-271701-tx0lqgff 169 22 loss loss NN cord-271701-tx0lqgff 169 23 of of IN cord-271701-tx0lqgff 169 24 nucleotide nucleotide JJ cord-271701-tx0lqgff 169 25 incorporation incorporation NN cord-271701-tx0lqgff 169 26 activity activity NN cord-271701-tx0lqgff 169 27 compared compare VBN cord-271701-tx0lqgff 169 28 to to IN cord-271701-tx0lqgff 169 29 the the DT cord-271701-tx0lqgff 169 30 wild wild JJ cord-271701-tx0lqgff 169 31 - - HYPH cord-271701-tx0lqgff 169 32 type type NN cord-271701-tx0lqgff 169 33 protein protein NN cord-271701-tx0lqgff 169 34 ( ( -LRB- cord-271701-tx0lqgff 169 35 Figure figure NN cord-271701-tx0lqgff 169 36 5 5 CD cord-271701-tx0lqgff 169 37 ) ) -RRB- cord-271701-tx0lqgff 169 38 . . . cord-271701-tx0lqgff 170 1 Other other JJ cord-271701-tx0lqgff 170 2 likely likely JJ cord-271701-tx0lqgff 170 3 candidates candidate NNS cord-271701-tx0lqgff 170 4 for for IN cord-271701-tx0lqgff 170 5 a a DT cord-271701-tx0lqgff 170 6 direct direct JJ cord-271701-tx0lqgff 170 7 role role NN cord-271701-tx0lqgff 170 8 in in IN cord-271701-tx0lqgff 170 9 RdRp RdRp NNP cord-271701-tx0lqgff 170 10 catalysis catalysis NN cord-271701-tx0lqgff 170 11 generally generally RB cord-271701-tx0lqgff 170 12 are be VBP cord-271701-tx0lqgff 170 13 Mg Mg NNP cord-271701-tx0lqgff 170 14 2 2 CD cord-271701-tx0lqgff 171 1 + + CC cord-271701-tx0lqgff 172 1 -coordinating -coordinate VBG cord-271701-tx0lqgff 172 2 aspartate aspartate NN cord-271701-tx0lqgff 172 3 residues residue NNS cord-271701-tx0lqgff 172 4 and and CC cord-271701-tx0lqgff 172 5 lysine lysine NN cord-271701-tx0lqgff 172 6 or or CC cord-271701-tx0lqgff 172 7 histidine histidine NN cord-271701-tx0lqgff 172 8 residues residue NNS cord-271701-tx0lqgff 172 9 that that WDT cord-271701-tx0lqgff 172 10 can can MD cord-271701-tx0lqgff 172 11 function function VB cord-271701-tx0lqgff 172 12 as as IN cord-271701-tx0lqgff 172 13 general general JJ cord-271701-tx0lqgff 172 14 acid acid NN cord-271701-tx0lqgff 172 15 ( ( -LRB- cord-271701-tx0lqgff 172 16 3 3 CD cord-271701-tx0lqgff 172 17 ) ) -RRB- cord-271701-tx0lqgff 172 18 . . . cord-271701-tx0lqgff 173 1 In in IN cord-271701-tx0lqgff 173 2 canonical canonical JJ cord-271701-tx0lqgff 173 3 RNA RNA NNP cord-271701-tx0lqgff 173 4 polymerases polymerase NNS cord-271701-tx0lqgff 173 5 , , , cord-271701-tx0lqgff 173 6 the the DT cord-271701-tx0lqgff 173 7 aspartates aspartate NNS cord-271701-tx0lqgff 173 8 commonly commonly RB cord-271701-tx0lqgff 173 9 reside reside VBP cord-271701-tx0lqgff 173 10 in in IN cord-271701-tx0lqgff 173 11 motifs motif NNS cord-271701-tx0lqgff 173 12 A a NN cord-271701-tx0lqgff 173 13 and and CC cord-271701-tx0lqgff 173 14 C C NNP cord-271701-tx0lqgff 173 15 ( ( -LRB- cord-271701-tx0lqgff 173 16 3 3 CD cord-271701-tx0lqgff 173 17 , , , cord-271701-tx0lqgff 173 18 21 21 CD cord-271701-tx0lqgff 173 19 ) ) -RRB- cord-271701-tx0lqgff 173 20 , , , cord-271701-tx0lqgff 173 21 while while IN cord-271701-tx0lqgff 173 22 in in IN cord-271701-tx0lqgff 173 23 DNA dna NN cord-271701-tx0lqgff 173 24 - - HYPH cord-271701-tx0lqgff 173 25 dependent dependent JJ cord-271701-tx0lqgff 173 26 RNA RNA NNP cord-271701-tx0lqgff 173 27 primases primase NNS cord-271701-tx0lqgff 173 28 they -PRON- PRP cord-271701-tx0lqgff 173 29 are be VBP cord-271701-tx0lqgff 173 30 usually usually RB cord-271701-tx0lqgff 173 31 found find VBN cord-271701-tx0lqgff 173 32 in in IN cord-271701-tx0lqgff 173 33 a a DT cord-271701-tx0lqgff 173 34 central central JJ cord-271701-tx0lqgff 173 35 D D NNP cord-271701-tx0lqgff 173 36 / / SYM cord-271701-tx0lqgff 173 37 ExD ExD NNP cord-271701-tx0lqgff 173 38 / / SYM cord-271701-tx0lqgff 173 39 E e NN cord-271701-tx0lqgff 173 40 motif motif NN cord-271701-tx0lqgff 173 41 ( ( -LRB- cord-271701-tx0lqgff 173 42 22 22 CD cord-271701-tx0lqgff 173 43 ) ) -RRB- cord-271701-tx0lqgff 173 44 . . . cord-271701-tx0lqgff 174 1 Given give VBN cord-271701-tx0lqgff 174 2 the the DT cord-271701-tx0lqgff 174 3 absence absence NN cord-271701-tx0lqgff 174 4 of of IN cord-271701-tx0lqgff 174 5 classical classical JJ cord-271701-tx0lqgff 174 6 RdRp RdRp NNP cord-271701-tx0lqgff 174 7 A A NNP cord-271701-tx0lqgff 174 8 and and CC cord-271701-tx0lqgff 174 9 C c NN cord-271701-tx0lqgff 174 10 motifs motif NNS cord-271701-tx0lqgff 174 11 in in IN cord-271701-tx0lqgff 174 12 the the DT cord-271701-tx0lqgff 174 13 nsp8 nsp8 JJ cord-271701-tx0lqgff 174 14 sequence sequence NN cord-271701-tx0lqgff 174 15 ( ( -LRB- cord-271701-tx0lqgff 174 16 12 12 CD cord-271701-tx0lqgff 174 17 ) ) -RRB- cord-271701-tx0lqgff 174 18 , , , cord-271701-tx0lqgff 174 19 we -PRON- PRP cord-271701-tx0lqgff 174 20 screened screen VBD cord-271701-tx0lqgff 174 21 an an DT cord-271701-tx0lqgff 174 22 alignment alignment NN cord-271701-tx0lqgff 174 23 of of IN cord-271701-tx0lqgff 174 24 CoV CoV NNP cord-271701-tx0lqgff 174 25 nsp8 nsp8 NN cord-271701-tx0lqgff 174 26 sequences sequence NNS cord-271701-tx0lqgff 174 27 for for IN cord-271701-tx0lqgff 174 28 conserved conserved JJ cord-271701-tx0lqgff 174 29 D D NNP cord-271701-tx0lqgff 174 30 / / SYM cord-271701-tx0lqgff 174 31 ExD exd NN cord-271701-tx0lqgff 174 32 / / SYM cord-271701-tx0lqgff 174 33 E e NN cord-271701-tx0lqgff 174 34 motifs motif NNS cord-271701-tx0lqgff 174 35 . . . cord-271701-tx0lqgff 175 1 Interestingly interestingly RB cord-271701-tx0lqgff 175 2 , , , cord-271701-tx0lqgff 175 3 we -PRON- PRP cord-271701-tx0lqgff 175 4 found find VBD cord-271701-tx0lqgff 175 5 such such PDT cord-271701-tx0lqgff 175 6 a a DT cord-271701-tx0lqgff 175 7 motif motif NN cord-271701-tx0lqgff 175 8 in in IN cord-271701-tx0lqgff 175 9 both both CC cord-271701-tx0lqgff 175 10 the the DT cord-271701-tx0lqgff 175 11 N N NNP cord-271701-tx0lqgff 175 12 - - HYPH cord-271701-tx0lqgff 175 13 terminal terminal NN cord-271701-tx0lqgff 175 14 and and CC cord-271701-tx0lqgff 175 15 the the DT cord-271701-tx0lqgff 175 16 C c NN cord-271701-tx0lqgff 175 17 - - HYPH cord-271701-tx0lqgff 175 18 terminal terminal NN cord-271701-tx0lqgff 175 19 domain domain NN cord-271701-tx0lqgff 175 20 ( ( -LRB- cord-271701-tx0lqgff 175 21 Figure figure NN cord-271701-tx0lqgff 175 22 5A 5a NN cord-271701-tx0lqgff 175 23 ) ) -RRB- cord-271701-tx0lqgff 175 24 . . . cord-271701-tx0lqgff 176 1 Subsequent subsequent JJ cord-271701-tx0lqgff 176 2 alanine alanine JJ cord-271701-tx0lqgff 176 3 substitution substitution NN cord-271701-tx0lqgff 176 4 of of IN cord-271701-tx0lqgff 176 5 the the DT cord-271701-tx0lqgff 176 6 N n CD cord-271701-tx0lqgff 176 7 - - HYPH cord-271701-tx0lqgff 176 8 terminal terminal NN cord-271701-tx0lqgff 176 9 D/ D/ NNP cord-271701-tx0lqgff 176 10 ExD ExD NNP cord-271701-tx0lqgff 176 11 / / SYM cord-271701-tx0lqgff 176 12 E e NN cord-271701-tx0lqgff 176 13 motif motif NN cord-271701-tx0lqgff 176 14 , , , cord-271701-tx0lqgff 176 15 composed compose VBN cord-271701-tx0lqgff 176 16 of of IN cord-271701-tx0lqgff 176 17 D50 D50 NNP cord-271701-tx0lqgff 176 18 and and CC cord-271701-tx0lqgff 176 19 D52 D52 NNP cord-271701-tx0lqgff 176 20 in in IN cord-271701-tx0lqgff 176 21 SARS SARS NNP cord-271701-tx0lqgff 176 22 - - HYPH cord-271701-tx0lqgff 176 23 CoV CoV NNP cord-271701-tx0lqgff 176 24 , , , cord-271701-tx0lqgff 176 25 greatly greatly RB cord-271701-tx0lqgff 176 26 affected affect VBN cord-271701-tx0lqgff 176 27 primer primer NN cord-271701-tx0lqgff 176 28 extension extension NN cord-271701-tx0lqgff 176 29 activity activity NN cord-271701-tx0lqgff 176 30 on on IN cord-271701-tx0lqgff 176 31 the the DT cord-271701-tx0lqgff 176 32 CU CU NNP cord-271701-tx0lqgff 176 33 10 10 CD cord-271701-tx0lqgff 176 34 template template NN cord-271701-tx0lqgff 176 35 as as IN cord-271701-tx0lqgff 176 36 shown show VBN cord-271701-tx0lqgff 176 37 in in IN cord-271701-tx0lqgff 176 38 Figure figure NN cord-271701-tx0lqgff 176 39 5C 5c CD cord-271701-tx0lqgff 176 40 . . . cord-271701-tx0lqgff 177 1 Mutation mutation NN cord-271701-tx0lqgff 177 2 of of IN cord-271701-tx0lqgff 177 3 the the DT cord-271701-tx0lqgff 177 4 downstream downstream JJ cord-271701-tx0lqgff 177 5 domain domain NN cord-271701-tx0lqgff 177 6 ( ( -LRB- cord-271701-tx0lqgff 177 7 residues residue NNS cord-271701-tx0lqgff 177 8 D161 D161 NNS cord-271701-tx0lqgff 177 9 and and CC cord-271701-tx0lqgff 177 10 D163 D163 NNP cord-271701-tx0lqgff 177 11 in in IN cord-271701-tx0lqgff 177 12 SARS SARS NNP cord-271701-tx0lqgff 177 13 - - HYPH cord-271701-tx0lqgff 177 14 CoV CoV NNP cord-271701-tx0lqgff 177 15 ) ) -RRB- cord-271701-tx0lqgff 177 16 , , , cord-271701-tx0lqgff 177 17 however however RB cord-271701-tx0lqgff 177 18 , , , cord-271701-tx0lqgff 177 19 had have VBD cord-271701-tx0lqgff 177 20 a a DT cord-271701-tx0lqgff 177 21 much much RB cord-271701-tx0lqgff 177 22 smaller small JJR cord-271701-tx0lqgff 177 23 effect effect NN cord-271701-tx0lqgff 177 24 on on IN cord-271701-tx0lqgff 177 25 polymerase polymerase NN cord-271701-tx0lqgff 177 26 activity activity NN cord-271701-tx0lqgff 177 27 , , , cord-271701-tx0lqgff 177 28 suggesting suggest VBG cord-271701-tx0lqgff 177 29 that that IN cord-271701-tx0lqgff 177 30 this this DT cord-271701-tx0lqgff 177 31 C c NN cord-271701-tx0lqgff 177 32 - - HYPH cord-271701-tx0lqgff 177 33 terminal terminal NN cord-271701-tx0lqgff 177 34 D D NNP cord-271701-tx0lqgff 177 35 / / SYM cord-271701-tx0lqgff 177 36 ExD ExD NNP cord-271701-tx0lqgff 177 37 / / SYM cord-271701-tx0lqgff 177 38 E e NN cord-271701-tx0lqgff 177 39 motif motif NN cord-271701-tx0lqgff 177 40 is be VBZ cord-271701-tx0lqgff 177 41 not not RB cord-271701-tx0lqgff 177 42 critical critical JJ cord-271701-tx0lqgff 177 43 for for IN cord-271701-tx0lqgff 177 44 catalysis catalysis NN cord-271701-tx0lqgff 177 45 . . . cord-271701-tx0lqgff 178 1 Controls control NNS cord-271701-tx0lqgff 178 2 included include VBD cord-271701-tx0lqgff 178 3 mutant mutant JJ cord-271701-tx0lqgff 178 4 K58A K58A NNS cord-271701-tx0lqgff 178 5 and and CC cord-271701-tx0lqgff 178 6 a a DT cord-271701-tx0lqgff 178 7 mutant mutant JJ cord-271701-tx0lqgff 178 8 carrying carry VBG cord-271701-tx0lqgff 178 9 a a DT cord-271701-tx0lqgff 178 10 lysine lysine NN cord-271701-tx0lqgff 178 11 - - HYPH cord-271701-tx0lqgff 178 12 to to IN cord-271701-tx0lqgff 178 13 - - HYPH cord-271701-tx0lqgff 178 14 alanine alanine NN cord-271701-tx0lqgff 178 15 substitution substitution NN cord-271701-tx0lqgff 178 16 of of IN cord-271701-tx0lqgff 178 17 the the DT cord-271701-tx0lqgff 178 18 non non JJ cord-271701-tx0lqgff 178 19 - - JJ cord-271701-tx0lqgff 178 20 conserved conserved JJ cord-271701-tx0lqgff 178 21 residue residue NN cord-271701-tx0lqgff 178 22 127 127 CD cord-271701-tx0lqgff 178 23 . . . cord-271701-tx0lqgff 179 1 In in IN cord-271701-tx0lqgff 179 2 line line NN cord-271701-tx0lqgff 179 3 with with IN cord-271701-tx0lqgff 179 4 the the DT cord-271701-tx0lqgff 179 5 observation observation NN cord-271701-tx0lqgff 179 6 of of IN cord-271701-tx0lqgff 179 7 the the DT cord-271701-tx0lqgff 179 8 U U NNP cord-271701-tx0lqgff 179 9 20 20 CD cord-271701-tx0lqgff 179 10 template template NN cord-271701-tx0lqgff 179 11 and and CC cord-271701-tx0lqgff 179 12 its -PRON- PRP$ cord-271701-tx0lqgff 179 13 conservation conservation NN cord-271701-tx0lqgff 179 14 in in IN cord-271701-tx0lqgff 179 15 CoVs CoVs NNP cord-271701-tx0lqgff 179 16 , , , cord-271701-tx0lqgff 179 17 the the DT cord-271701-tx0lqgff 179 18 loss loss NN cord-271701-tx0lqgff 179 19 of of IN cord-271701-tx0lqgff 179 20 a a DT cord-271701-tx0lqgff 179 21 lysine lysine NN cord-271701-tx0lqgff 179 22 at at IN cord-271701-tx0lqgff 179 23 position position NN cord-271701-tx0lqgff 179 24 58 58 CD cord-271701-tx0lqgff 179 25 resulted result VBD cord-271701-tx0lqgff 179 26 in in IN cord-271701-tx0lqgff 179 27 a a DT cord-271701-tx0lqgff 179 28 near near JJ cord-271701-tx0lqgff 179 29 complete complete JJ cord-271701-tx0lqgff 179 30 loss loss NN cord-271701-tx0lqgff 179 31 of of IN cord-271701-tx0lqgff 179 32 RdRp RdRp NNP cord-271701-tx0lqgff 179 33 activity activity NN cord-271701-tx0lqgff 179 34 , , , cord-271701-tx0lqgff 179 35 whereas whereas IN cord-271701-tx0lqgff 179 36 mutation mutation NN cord-271701-tx0lqgff 179 37 of of IN cord-271701-tx0lqgff 179 38 K127 K127 NNP cord-271701-tx0lqgff 179 39 positively positively RB cord-271701-tx0lqgff 179 40 influenced influence VBD cord-271701-tx0lqgff 179 41 RNA RNA NNP cord-271701-tx0lqgff 179 42 synthesis synthesis NN cord-271701-tx0lqgff 179 43 ( ( -LRB- cord-271701-tx0lqgff 179 44 Figure figure NN cord-271701-tx0lqgff 179 45 5 5 CD cord-271701-tx0lqgff 179 46 ) ) -RRB- cord-271701-tx0lqgff 179 47 . . . cord-271701-tx0lqgff 179 48 _SP cord-271701-tx0lqgff 180 1 As as IN cord-271701-tx0lqgff 180 2 outlined outline VBN cord-271701-tx0lqgff 180 3 above above RB cord-271701-tx0lqgff 180 4 , , , cord-271701-tx0lqgff 180 5 magnesium magnesium NN cord-271701-tx0lqgff 180 6 ions ion NNS cord-271701-tx0lqgff 180 7 are be VBP cord-271701-tx0lqgff 180 8 well well RB cord-271701-tx0lqgff 180 9 - - HYPH cord-271701-tx0lqgff 180 10 known know VBN cord-271701-tx0lqgff 180 11 cofactors cofactor NNS cord-271701-tx0lqgff 180 12 of of IN cord-271701-tx0lqgff 180 13 nucleic nucleic JJ cord-271701-tx0lqgff 180 14 acid acid NN cord-271701-tx0lqgff 180 15 polymerases polymerase NNS cord-271701-tx0lqgff 180 16 and and CC cord-271701-tx0lqgff 180 17 assist assist VB cord-271701-tx0lqgff 180 18 in in IN cord-271701-tx0lqgff 180 19 the the DT cord-271701-tx0lqgff 180 20 coordination coordination NN cord-271701-tx0lqgff 180 21 and and CC cord-271701-tx0lqgff 180 22 activation activation NN cord-271701-tx0lqgff 180 23 of of IN cord-271701-tx0lqgff 180 24 incoming incoming JJ cord-271701-tx0lqgff 180 25 nucleoside nucleoside NN cord-271701-tx0lqgff 180 26 triphosphates triphosphate NNS cord-271701-tx0lqgff 180 27 . . . cord-271701-tx0lqgff 181 1 Also also RB cord-271701-tx0lqgff 181 2 the the DT cord-271701-tx0lqgff 181 3 activity activity NN cord-271701-tx0lqgff 181 4 of of IN cord-271701-tx0lqgff 181 5 SARS SARS NNP cord-271701-tx0lqgff 181 6 - - HYPH cord-271701-tx0lqgff 181 7 CoV CoV NNP cord-271701-tx0lqgff 181 8 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 181 9 + + SYM cord-271701-tx0lqgff 181 10 8 8 CD cord-271701-tx0lqgff 181 11 ) ) -RRB- cord-271701-tx0lqgff 181 12 was be VBD cord-271701-tx0lqgff 181 13 found find VBN cord-271701-tx0lqgff 181 14 to to TO cord-271701-tx0lqgff 181 15 be be VB cord-271701-tx0lqgff 181 16 positively positively RB cord-271701-tx0lqgff 181 17 correlated correlate VBN cord-271701-tx0lqgff 181 18 with with IN cord-271701-tx0lqgff 181 19 the the DT cord-271701-tx0lqgff 181 20 Mg Mg NNP cord-271701-tx0lqgff 181 21 2 2 CD cord-271701-tx0lqgff 181 22 + + CC cord-271701-tx0lqgff 181 23 concentration concentration NN cord-271701-tx0lqgff 181 24 , , , cord-271701-tx0lqgff 181 25 albeit albeit IN cord-271701-tx0lqgff 181 26 with with IN cord-271701-tx0lqgff 181 27 a a DT cord-271701-tx0lqgff 181 28 broad broad JJ cord-271701-tx0lqgff 181 29 optimum optimum JJ cord-271701-tx0lqgff 181 30 running running NN cord-271701-tx0lqgff 181 31 from from IN cord-271701-tx0lqgff 181 32 4 4 CD cord-271701-tx0lqgff 181 33 - - SYM cord-271701-tx0lqgff 181 34 10 10 CD cord-271701-tx0lqgff 181 35 mM mm CD cord-271701-tx0lqgff 181 36 ( ( -LRB- cord-271701-tx0lqgff 181 37 Figure figure NN cord-271701-tx0lqgff 181 38 6A 6a CD cord-271701-tx0lqgff 181 39 ) ) -RRB- cord-271701-tx0lqgff 181 40 . . . cord-271701-tx0lqgff 182 1 At at IN cord-271701-tx0lqgff 182 2 this this DT cord-271701-tx0lqgff 182 3 optimum optimum NN cord-271701-tx0lqgff 182 4 , , , cord-271701-tx0lqgff 182 5 nsp(7 nsp(7 IN cord-271701-tx0lqgff 182 6 + + SYM cord-271701-tx0lqgff 182 7 8 8 CD cord-271701-tx0lqgff 182 8 ) ) -RRB- cord-271701-tx0lqgff 182 9 incorporates incorporate VBZ cord-271701-tx0lqgff 182 10 $ $ $ cord-271701-tx0lqgff 182 11 1 1 CD cord-271701-tx0lqgff 182 12 mM mm CD cord-271701-tx0lqgff 182 13 NMP NMP NNP cord-271701-tx0lqgff 182 14 into into IN cord-271701-tx0lqgff 182 15 the the DT cord-271701-tx0lqgff 182 16 primed prime VBN cord-271701-tx0lqgff 182 17 template template NN cord-271701-tx0lqgff 182 18 per per IN cord-271701-tx0lqgff 182 19 mM mm CD cord-271701-tx0lqgff 182 20 of of IN cord-271701-tx0lqgff 182 21 monomeric monomeric JJ cord-271701-tx0lqgff 182 22 nsp7 nsp7 NN cord-271701-tx0lqgff 182 23 and and CC cord-271701-tx0lqgff 182 24 nsp8 nsp8 NN cord-271701-tx0lqgff 182 25 present present JJ cord-271701-tx0lqgff 182 26 in in IN cord-271701-tx0lqgff 182 27 the the DT cord-271701-tx0lqgff 182 28 reaction reaction NN cord-271701-tx0lqgff 182 29 . . . cord-271701-tx0lqgff 183 1 Similar similar JJ cord-271701-tx0lqgff 183 2 to to IN cord-271701-tx0lqgff 183 3 the the DT cord-271701-tx0lqgff 183 4 presence presence NN cord-271701-tx0lqgff 183 5 of of IN cord-271701-tx0lqgff 183 6 divalent divalent JJ cord-271701-tx0lqgff 183 7 cations cation NNS cord-271701-tx0lqgff 183 8 , , , cord-271701-tx0lqgff 183 9 the the DT cord-271701-tx0lqgff 183 10 pH pH NNP cord-271701-tx0lqgff 183 11 greatly greatly RB cord-271701-tx0lqgff 183 12 affects affect VBZ cord-271701-tx0lqgff 183 13 the the DT cord-271701-tx0lqgff 183 14 activity activity NN cord-271701-tx0lqgff 183 15 of of IN cord-271701-tx0lqgff 183 16 RdRps RdRps NNP cord-271701-tx0lqgff 183 17 and and CC cord-271701-tx0lqgff 183 18 has have VBZ cord-271701-tx0lqgff 183 19 been be VBN cord-271701-tx0lqgff 183 20 shown show VBN cord-271701-tx0lqgff 183 21 to to TO cord-271701-tx0lqgff 183 22 play play VB cord-271701-tx0lqgff 183 23 a a DT cord-271701-tx0lqgff 183 24 role role NN cord-271701-tx0lqgff 183 25 in in IN cord-271701-tx0lqgff 183 26 both both DT cord-271701-tx0lqgff 183 27 catalysis catalysis NN cord-271701-tx0lqgff 183 28 and and CC cord-271701-tx0lqgff 183 29 fidelity fidelity NN cord-271701-tx0lqgff 183 30 ( ( -LRB- cord-271701-tx0lqgff 183 31 3 3 CD cord-271701-tx0lqgff 183 32 , , , cord-271701-tx0lqgff 183 33 23 23 CD cord-271701-tx0lqgff 183 34 ) ) -RRB- cord-271701-tx0lqgff 183 35 . . . cord-271701-tx0lqgff 184 1 To to TO cord-271701-tx0lqgff 184 2 investigate investigate VB cord-271701-tx0lqgff 184 3 the the DT cord-271701-tx0lqgff 184 4 influence influence NN cord-271701-tx0lqgff 184 5 of of IN cord-271701-tx0lqgff 184 6 the the DT cord-271701-tx0lqgff 184 7 pH pH NNP cord-271701-tx0lqgff 184 8 on on IN cord-271701-tx0lqgff 184 9 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 184 10 + + SYM cord-271701-tx0lqgff 184 11 8 8 CD cord-271701-tx0lqgff 184 12 ) ) -RRB- cord-271701-tx0lqgff 184 13 , , , cord-271701-tx0lqgff 184 14 we -PRON- PRP cord-271701-tx0lqgff 184 15 tested test VBD cord-271701-tx0lqgff 184 16 the the DT cord-271701-tx0lqgff 184 17 activity activity NN cord-271701-tx0lqgff 184 18 of of IN cord-271701-tx0lqgff 184 19 the the DT cord-271701-tx0lqgff 184 20 complex complex NN cord-271701-tx0lqgff 184 21 in in IN cord-271701-tx0lqgff 184 22 a a DT cord-271701-tx0lqgff 184 23 pH pH NNP cord-271701-tx0lqgff 184 24 range range NN cord-271701-tx0lqgff 184 25 of of IN cord-271701-tx0lqgff 184 26 6 6 CD cord-271701-tx0lqgff 184 27 - - SYM cord-271701-tx0lqgff 184 28 11 11 CD cord-271701-tx0lqgff 184 29 . . . cord-271701-tx0lqgff 185 1 As as IN cord-271701-tx0lqgff 185 2 shown show VBN cord-271701-tx0lqgff 185 3 in in IN cord-271701-tx0lqgff 185 4 Figure figure NN cord-271701-tx0lqgff 185 5 6C 6c NN cord-271701-tx0lqgff 185 6 , , , cord-271701-tx0lqgff 185 7 we -PRON- PRP cord-271701-tx0lqgff 185 8 observed observe VBD cord-271701-tx0lqgff 185 9 a a DT cord-271701-tx0lqgff 185 10 sharp sharp JJ cord-271701-tx0lqgff 185 11 optimum optimum NN cord-271701-tx0lqgff 185 12 at at IN cord-271701-tx0lqgff 185 13 pH pH NNP cord-271701-tx0lqgff 185 14 9.5 9.5 CD cord-271701-tx0lqgff 185 15 , , , cord-271701-tx0lqgff 185 16 which which WDT cord-271701-tx0lqgff 185 17 is be VBZ cord-271701-tx0lqgff 185 18 considerably considerably RB cord-271701-tx0lqgff 185 19 higher high JJR cord-271701-tx0lqgff 185 20 than than IN cord-271701-tx0lqgff 185 21 the the DT cord-271701-tx0lqgff 185 22 optimum optimum NN cord-271701-tx0lqgff 185 23 that that WDT cord-271701-tx0lqgff 185 24 was be VBD cord-271701-tx0lqgff 185 25 previously previously RB cord-271701-tx0lqgff 185 26 observed observe VBN cord-271701-tx0lqgff 185 27 for for IN cord-271701-tx0lqgff 185 28 the the DT cord-271701-tx0lqgff 185 29 SARS SARS NNP cord-271701-tx0lqgff 185 30 - - HYPH cord-271701-tx0lqgff 185 31 CoV CoV NNP cord-271701-tx0lqgff 185 32 nsp12-RdRp nsp12-RdRp NNP cord-271701-tx0lqgff 185 33 and and CC cord-271701-tx0lqgff 185 34 the the DT cord-271701-tx0lqgff 185 35 His -PRON- PRP$ cord-271701-tx0lqgff 185 36 - - HYPH cord-271701-tx0lqgff 185 37 nsp8 nsp8 NN cord-271701-tx0lqgff 185 38 homomer homomer NN cord-271701-tx0lqgff 185 39 ( ( -LRB- cord-271701-tx0lqgff 185 40 pH pH NNP cord-271701-tx0lqgff 185 41 optimum optimum NNP cord-271701-tx0lqgff 185 42 7.5 7.5 CD cord-271701-tx0lqgff 185 43 and and CC cord-271701-tx0lqgff 185 44 8.0 8.0 CD cord-271701-tx0lqgff 185 45 , , , cord-271701-tx0lqgff 185 46 respectively respectively RB cord-271701-tx0lqgff 185 47 ) ) -RRB- cord-271701-tx0lqgff 185 48 ( ( -LRB- cord-271701-tx0lqgff 185 49 10 10 CD cord-271701-tx0lqgff 185 50 , , , cord-271701-tx0lqgff 185 51 12 12 CD cord-271701-tx0lqgff 185 52 ) ) -RRB- cord-271701-tx0lqgff 185 53 . . . cord-271701-tx0lqgff 186 1 Interestingly interestingly RB cord-271701-tx0lqgff 186 2 , , , cord-271701-tx0lqgff 186 3 the the DT cord-271701-tx0lqgff 186 4 primer primer NN cord-271701-tx0lqgff 186 5 extension extension NN cord-271701-tx0lqgff 186 6 activity activity NN cord-271701-tx0lqgff 186 7 of of IN cord-271701-tx0lqgff 186 8 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 186 9 + + SYM cord-271701-tx0lqgff 186 10 8 8 CD cord-271701-tx0lqgff 186 11 ) ) -RRB- cord-271701-tx0lqgff 186 12 did do VBD cord-271701-tx0lqgff 186 13 not not RB cord-271701-tx0lqgff 186 14 require require VB cord-271701-tx0lqgff 186 15 manganese manganese NN cord-271701-tx0lqgff 186 16 ions ion NNS cord-271701-tx0lqgff 186 17 as as IN cord-271701-tx0lqgff 186 18 was be VBD cord-271701-tx0lqgff 186 19 previously previously RB cord-271701-tx0lqgff 186 20 reported report VBN cord-271701-tx0lqgff 186 21 for for IN cord-271701-tx0lqgff 186 22 the the DT cord-271701-tx0lqgff 186 23 His -PRON- PRP$ cord-271701-tx0lqgff 186 24 - - HYPH cord-271701-tx0lqgff 186 25 nsp8 nsp8 NN cord-271701-tx0lqgff 186 26 homomer homomer NN cord-271701-tx0lqgff 186 27 ( ( -LRB- cord-271701-tx0lqgff 186 28 12 12 CD cord-271701-tx0lqgff 186 29 ) ) -RRB- cord-271701-tx0lqgff 186 30 . . . cord-271701-tx0lqgff 187 1 In in IN cord-271701-tx0lqgff 187 2 fact fact NN cord-271701-tx0lqgff 187 3 , , , cord-271701-tx0lqgff 187 4 similar similar JJ cord-271701-tx0lqgff 187 5 to to IN cord-271701-tx0lqgff 187 6 the the DT cord-271701-tx0lqgff 187 7 SARS SARS NNP cord-271701-tx0lqgff 187 8 - - HYPH cord-271701-tx0lqgff 187 9 CoV CoV NNP cord-271701-tx0lqgff 187 10 nsp12-RdRp nsp12-RdRp NNP cord-271701-tx0lqgff 187 11 ( ( -LRB- cord-271701-tx0lqgff 187 12 10 10 CD cord-271701-tx0lqgff 187 13 ) ) -RRB- cord-271701-tx0lqgff 187 14 , , , cord-271701-tx0lqgff 187 15 the the DT cord-271701-tx0lqgff 187 16 addition addition NN cord-271701-tx0lqgff 187 17 of of IN cord-271701-tx0lqgff 187 18 Mn Mn NNP cord-271701-tx0lqgff 187 19 2 2 CD cord-271701-tx0lqgff 187 20 + + SYM cord-271701-tx0lqgff 187 21 was be VBD cord-271701-tx0lqgff 187 22 found find VBN cord-271701-tx0lqgff 187 23 to to TO cord-271701-tx0lqgff 187 24 reduce reduce VB cord-271701-tx0lqgff 187 25 the the DT cord-271701-tx0lqgff 187 26 fidelity fidelity NN cord-271701-tx0lqgff 187 27 of of IN cord-271701-tx0lqgff 187 28 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 187 29 + + SYM cord-271701-tx0lqgff 187 30 8 8 CD cord-271701-tx0lqgff 187 31 ) ) -RRB- cord-271701-tx0lqgff 187 32 and and CC cord-271701-tx0lqgff 187 33 induce induce VB cord-271701-tx0lqgff 187 34 both both DT cord-271701-tx0lqgff 187 35 transversional transversional JJ cord-271701-tx0lqgff 187 36 and and CC cord-271701-tx0lqgff 187 37 transitional transitional JJ cord-271701-tx0lqgff 187 38 misincorporations misincorporation NNS cord-271701-tx0lqgff 187 39 in in IN cord-271701-tx0lqgff 187 40 a a DT cord-271701-tx0lqgff 187 41 pulse pulse NN cord-271701-tx0lqgff 187 42 - - HYPH cord-271701-tx0lqgff 187 43 chase chase NN cord-271701-tx0lqgff 187 44 experiment experiment NN cord-271701-tx0lqgff 187 45 ( ( -LRB- cord-271701-tx0lqgff 187 46 Figure Figure NNP cord-271701-tx0lqgff 187 47 6E 6E NNP cord-271701-tx0lqgff 187 48 and and CC cord-271701-tx0lqgff 187 49 F F NNP cord-271701-tx0lqgff 187 50 ) ) -RRB- cord-271701-tx0lqgff 187 51 . . . cord-271701-tx0lqgff 188 1 Interestingly interestingly RB cord-271701-tx0lqgff 188 2 , , , cord-271701-tx0lqgff 188 3 the the DT cord-271701-tx0lqgff 188 4 assay assay NN cord-271701-tx0lqgff 188 5 also also RB cord-271701-tx0lqgff 188 6 revealed reveal VBD cord-271701-tx0lqgff 188 7 a a DT cord-271701-tx0lqgff 188 8 discrimination discrimination NN cord-271701-tx0lqgff 188 9 against against IN cord-271701-tx0lqgff 188 10 the the DT cord-271701-tx0lqgff 188 11 widely widely RB cord-271701-tx0lqgff 188 12 Figure figure NN cord-271701-tx0lqgff 188 13 5 5 CD cord-271701-tx0lqgff 188 14 . . . cord-271701-tx0lqgff 189 1 Mutagenesis Mutagenesis NNP cord-271701-tx0lqgff 189 2 of of IN cord-271701-tx0lqgff 189 3 SARS SARS NNP cord-271701-tx0lqgff 189 4 - - HYPH cord-271701-tx0lqgff 189 5 CoV CoV NNP cord-271701-tx0lqgff 189 6 nsp8 nsp8 NN cord-271701-tx0lqgff 189 7 . . . cord-271701-tx0lqgff 190 1 ( ( -LRB- cord-271701-tx0lqgff 190 2 A a DT cord-271701-tx0lqgff 190 3 ) ) -RRB- cord-271701-tx0lqgff 190 4 Alignment alignment NN cord-271701-tx0lqgff 190 5 of of IN cord-271701-tx0lqgff 190 6 nsp8 nsp8 JJ cord-271701-tx0lqgff 190 7 sequences sequence NNS cord-271701-tx0lqgff 190 8 from from IN cord-271701-tx0lqgff 190 9 representative representative NNP cord-271701-tx0lqgff 190 10 alpha- alpha- NN cord-271701-tx0lqgff 190 11 , , , cord-271701-tx0lqgff 190 12 beta beta NN cord-271701-tx0lqgff 190 13 - - HYPH cord-271701-tx0lqgff 190 14 and and CC cord-271701-tx0lqgff 190 15 gammacoronaviruses gammacoronaviruse NNS cord-271701-tx0lqgff 190 16 . . . cord-271701-tx0lqgff 191 1 Fully fully RB cord-271701-tx0lqgff 191 2 conserved conserve VBN cord-271701-tx0lqgff 191 3 residues residue NNS cord-271701-tx0lqgff 191 4 are be VBP cord-271701-tx0lqgff 191 5 shaded shade VBN cord-271701-tx0lqgff 191 6 red red JJ cord-271701-tx0lqgff 191 7 , , , cord-271701-tx0lqgff 191 8 while while IN cord-271701-tx0lqgff 191 9 partially partially RB cord-271701-tx0lqgff 191 10 conserved conserve VBN cord-271701-tx0lqgff 191 11 residues residue NNS cord-271701-tx0lqgff 191 12 are be VBP cord-271701-tx0lqgff 191 13 boxed box VBN cord-271701-tx0lqgff 191 14 . . . cord-271701-tx0lqgff 192 1 The the DT cord-271701-tx0lqgff 192 2 residues residue NNS cord-271701-tx0lqgff 192 3 targeted target VBN cord-271701-tx0lqgff 192 4 by by IN cord-271701-tx0lqgff 192 5 mutagenesis mutagenesi NNS cord-271701-tx0lqgff 192 6 are be VBP cord-271701-tx0lqgff 192 7 indicated indicate VBN cord-271701-tx0lqgff 192 8 with with IN cord-271701-tx0lqgff 192 9 asterisks asterisk NNS cord-271701-tx0lqgff 192 10 . . . cord-271701-tx0lqgff 193 1 Please please UH cord-271701-tx0lqgff 193 2 see see VB cord-271701-tx0lqgff 193 3 ' ' '' cord-271701-tx0lqgff 193 4 Material Material NNP cord-271701-tx0lqgff 193 5 and and CC cord-271701-tx0lqgff 193 6 Methods Methods NNPS cord-271701-tx0lqgff 193 7 ' ' POS cord-271701-tx0lqgff 193 8 section section NN cord-271701-tx0lqgff 193 9 for for IN cord-271701-tx0lqgff 193 10 the the DT cord-271701-tx0lqgff 193 11 Genbank Genbank NNP cord-271701-tx0lqgff 193 12 accession accession NN cord-271701-tx0lqgff 193 13 numbers number NNS cord-271701-tx0lqgff 193 14 associated associate VBN cord-271701-tx0lqgff 193 15 with with IN cord-271701-tx0lqgff 193 16 the the DT cord-271701-tx0lqgff 193 17 presented present VBN cord-271701-tx0lqgff 193 18 sequences sequence NNS cord-271701-tx0lqgff 193 19 . . . cord-271701-tx0lqgff 194 1 ( ( -LRB- cord-271701-tx0lqgff 194 2 B b NN cord-271701-tx0lqgff 194 3 ) ) -RRB- cord-271701-tx0lqgff 195 1 To to TO cord-271701-tx0lqgff 195 2 verify verify VB cord-271701-tx0lqgff 195 3 that that IN cord-271701-tx0lqgff 195 4 the the DT cord-271701-tx0lqgff 195 5 observed observed JJ cord-271701-tx0lqgff 195 6 extension extension NN cord-271701-tx0lqgff 195 7 activity activity NN cord-271701-tx0lqgff 195 8 was be VBD cord-271701-tx0lqgff 195 9 nsp8-dependent nsp8-dependent NNP cord-271701-tx0lqgff 195 10 , , , cord-271701-tx0lqgff 195 11 we -PRON- PRP cord-271701-tx0lqgff 195 12 tested test VBD cord-271701-tx0lqgff 195 13 the the DT cord-271701-tx0lqgff 195 14 incorporation incorporation NN cord-271701-tx0lqgff 195 15 of of IN cord-271701-tx0lqgff 195 16 AMP amp NN cord-271701-tx0lqgff 195 17 into into IN cord-271701-tx0lqgff 195 18 the the DT cord-271701-tx0lqgff 195 19 primed prime VBN cord-271701-tx0lqgff 195 20 U u NN cord-271701-tx0lqgff 195 21 20 20 CD cord-271701-tx0lqgff 195 22 template template NN cord-271701-tx0lqgff 195 23 by by IN cord-271701-tx0lqgff 195 24 1 1 CD cord-271701-tx0lqgff 195 25 , , , cord-271701-tx0lqgff 195 26 5 5 CD cord-271701-tx0lqgff 195 27 or or CC cord-271701-tx0lqgff 195 28 10 10 CD cord-271701-tx0lqgff 195 29 mM mm CD cord-271701-tx0lqgff 195 30 of of IN cord-271701-tx0lqgff 195 31 wild wild JJ cord-271701-tx0lqgff 195 32 - - HYPH cord-271701-tx0lqgff 195 33 type type NN cord-271701-tx0lqgff 195 34 nsp8 nsp8 NN cord-271701-tx0lqgff 195 35 or or CC cord-271701-tx0lqgff 195 36 template template NN cord-271701-tx0lqgff 195 37 - - HYPH cord-271701-tx0lqgff 195 38 binding bind VBG cord-271701-tx0lqgff 195 39 mutant mutant JJ cord-271701-tx0lqgff 195 40 K58A. K58A. NNP cord-271701-tx0lqgff 195 41 Mutation Mutation NNP cord-271701-tx0lqgff 195 42 of of IN cord-271701-tx0lqgff 195 43 K58 K58 NNP cord-271701-tx0lqgff 195 44 resulted result VBD cord-271701-tx0lqgff 195 45 in in IN cord-271701-tx0lqgff 195 46 a a DT cord-271701-tx0lqgff 195 47 $ $ $ cord-271701-tx0lqgff 195 48 95 95 CD cord-271701-tx0lqgff 195 49 % % NN cord-271701-tx0lqgff 195 50 reduction reduction NN cord-271701-tx0lqgff 195 51 of of IN cord-271701-tx0lqgff 195 52 AMP amp NN cord-271701-tx0lqgff 195 53 incorporation incorporation NN cord-271701-tx0lqgff 195 54 . . . cord-271701-tx0lqgff 196 1 ( ( -LRB- cord-271701-tx0lqgff 196 2 C C NNP cord-271701-tx0lqgff 196 3 ) ) -RRB- cord-271701-tx0lqgff 197 1 To to TO cord-271701-tx0lqgff 197 2 assess assess VB cord-271701-tx0lqgff 197 3 the the DT cord-271701-tx0lqgff 197 4 importance importance NN cord-271701-tx0lqgff 197 5 of of IN cord-271701-tx0lqgff 197 6 the the DT cord-271701-tx0lqgff 197 7 two two CD cord-271701-tx0lqgff 197 8 D d NN cord-271701-tx0lqgff 197 9 / / SYM cord-271701-tx0lqgff 197 10 ExD exd NN cord-271701-tx0lqgff 197 11 / / SYM cord-271701-tx0lqgff 197 12 E e NN cord-271701-tx0lqgff 197 13 motifs motif NNS cord-271701-tx0lqgff 197 14 in in IN cord-271701-tx0lqgff 197 15 nsp8 nsp8 NN cord-271701-tx0lqgff 197 16 , , , cord-271701-tx0lqgff 197 17 we -PRON- PRP cord-271701-tx0lqgff 197 18 engineered engineer VBD cord-271701-tx0lqgff 197 19 alanine alanine JJ cord-271701-tx0lqgff 197 20 substitution substitution NN cord-271701-tx0lqgff 197 21 mutants mutant NNS cord-271701-tx0lqgff 197 22 of of IN cord-271701-tx0lqgff 197 23 these these DT cord-271701-tx0lqgff 197 24 residues residue NNS cord-271701-tx0lqgff 197 25 and and CC cord-271701-tx0lqgff 197 26 tested test VBD cord-271701-tx0lqgff 197 27 their -PRON- PRP$ cord-271701-tx0lqgff 197 28 primer primer NN cord-271701-tx0lqgff 197 29 extension extension NN cord-271701-tx0lqgff 197 30 activity activity NN cord-271701-tx0lqgff 197 31 on on IN cord-271701-tx0lqgff 197 32 the the DT cord-271701-tx0lqgff 197 33 primed prime VBN cord-271701-tx0lqgff 197 34 UC UC NNP cord-271701-tx0lqgff 197 35 10 10 CD cord-271701-tx0lqgff 197 36 template template NN cord-271701-tx0lqgff 197 37 ( ( -LRB- cord-271701-tx0lqgff 197 38 see see VB cord-271701-tx0lqgff 197 39 Figure figure NN cord-271701-tx0lqgff 197 40 4 4 CD cord-271701-tx0lqgff 197 41 ) ) -RRB- cord-271701-tx0lqgff 197 42 . . . cord-271701-tx0lqgff 198 1 Reactions reaction NNS cord-271701-tx0lqgff 198 2 were be VBD cord-271701-tx0lqgff 198 3 stopped stop VBN cord-271701-tx0lqgff 198 4 after after IN cord-271701-tx0lqgff 198 5 60 60 CD cord-271701-tx0lqgff 198 6 min min NN cord-271701-tx0lqgff 198 7 and and CC cord-271701-tx0lqgff 198 8 compared compare VBN cord-271701-tx0lqgff 198 9 to to IN cord-271701-tx0lqgff 198 10 the the DT cord-271701-tx0lqgff 198 11 activity activity NN cord-271701-tx0lqgff 198 12 of of IN cord-271701-tx0lqgff 198 13 the the DT cord-271701-tx0lqgff 198 14 wild wild JJ cord-271701-tx0lqgff 198 15 - - HYPH cord-271701-tx0lqgff 198 16 type type NN cord-271701-tx0lqgff 198 17 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 198 18 + + SYM cord-271701-tx0lqgff 198 19 8 8 CD cord-271701-tx0lqgff 198 20 ) ) -RRB- cord-271701-tx0lqgff 198 21 complex complex VB cord-271701-tx0lqgff 198 22 on on IN cord-271701-tx0lqgff 198 23 a a DT cord-271701-tx0lqgff 198 24 20 20 CD cord-271701-tx0lqgff 198 25 % % NN cord-271701-tx0lqgff 198 26 PAGE/ PAGE/ NNP cord-271701-tx0lqgff 198 27 used use VBD cord-271701-tx0lqgff 198 28 ATP ATP NNP cord-271701-tx0lqgff 198 29 and and CC cord-271701-tx0lqgff 198 30 GTP GTP NNP cord-271701-tx0lqgff 198 31 analogue analogue NN cord-271701-tx0lqgff 198 32 ribavirin ribavirin NN cord-271701-tx0lqgff 198 33 triphosphate triphosphate NN cord-271701-tx0lqgff 198 34 ( ( -LRB- cord-271701-tx0lqgff 198 35 RTP RTP NNP cord-271701-tx0lqgff 198 36 ) ) -RRB- cord-271701-tx0lqgff 198 37 ( ( -LRB- cord-271701-tx0lqgff 198 38 24 24 CD cord-271701-tx0lqgff 198 39 , , , cord-271701-tx0lqgff 198 40 25 25 CD cord-271701-tx0lqgff 198 41 ) ) -RRB- cord-271701-tx0lqgff 198 42 . . . cord-271701-tx0lqgff 199 1 Whether whether IN cord-271701-tx0lqgff 199 2 this this DT cord-271701-tx0lqgff 199 3 may may MD cord-271701-tx0lqgff 199 4 offer offer VB cord-271701-tx0lqgff 199 5 an an DT cord-271701-tx0lqgff 199 6 explanation explanation NN cord-271701-tx0lqgff 199 7 for for IN cord-271701-tx0lqgff 199 8 SARS SARS NNP cord-271701-tx0lqgff 199 9 - - HYPH cord-271701-tx0lqgff 199 10 CoV CoV NNP cord-271701-tx0lqgff 199 11 's 's POS cord-271701-tx0lqgff 199 12 relative relative JJ cord-271701-tx0lqgff 199 13 resistance resistance NN cord-271701-tx0lqgff 199 14 to to IN cord-271701-tx0lqgff 199 15 this this DT cord-271701-tx0lqgff 199 16 antiviral antiviral JJ cord-271701-tx0lqgff 199 17 drug drug NN cord-271701-tx0lqgff 199 18 ( ( -LRB- cord-271701-tx0lqgff 199 19 26 26 CD cord-271701-tx0lqgff 199 20 , , , cord-271701-tx0lqgff 199 21 27 27 CD cord-271701-tx0lqgff 199 22 ) ) -RRB- cord-271701-tx0lqgff 199 23 remains remain VBZ cord-271701-tx0lqgff 199 24 an an DT cord-271701-tx0lqgff 199 25 open open JJ cord-271701-tx0lqgff 199 26 question question NN cord-271701-tx0lqgff 199 27 for for IN cord-271701-tx0lqgff 199 28 future future JJ cord-271701-tx0lqgff 199 29 research research NN cord-271701-tx0lqgff 199 30 . . . cord-271701-tx0lqgff 200 1 The the DT cord-271701-tx0lqgff 200 2 primer primer NN cord-271701-tx0lqgff 200 3 - - HYPH cord-271701-tx0lqgff 200 4 extension extension NN cord-271701-tx0lqgff 200 5 and and CC cord-271701-tx0lqgff 200 6 terminal terminal JJ cord-271701-tx0lqgff 200 7 transferase transferase NN cord-271701-tx0lqgff 200 8 activity activity NN cord-271701-tx0lqgff 200 9 documented document VBN cord-271701-tx0lqgff 200 10 in in IN cord-271701-tx0lqgff 200 11 Figure figure NN cord-271701-tx0lqgff 200 12 4 4 CD cord-271701-tx0lqgff 200 13 for for IN cord-271701-tx0lqgff 200 14 the the DT cord-271701-tx0lqgff 200 15 complex complex NN cord-271701-tx0lqgff 200 16 containing contain VBG cord-271701-tx0lqgff 200 17 the the DT cord-271701-tx0lqgff 200 18 untagged untagged JJ cord-271701-tx0lqgff 200 19 nsp8 nsp8 NN cord-271701-tx0lqgff 200 20 was be VBD cord-271701-tx0lqgff 200 21 not not RB cord-271701-tx0lqgff 200 22 observed observe VBN cord-271701-tx0lqgff 200 23 by by IN cord-271701-tx0lqgff 200 24 Imbert Imbert NNP cord-271701-tx0lqgff 200 25 et et NNP cord-271701-tx0lqgff 200 26 al al NNP cord-271701-tx0lqgff 200 27 . . . cord-271701-tx0lqgff 201 1 ( ( -LRB- cord-271701-tx0lqgff 201 2 12 12 CD cord-271701-tx0lqgff 201 3 ) ) -RRB- cord-271701-tx0lqgff 201 4 when when WRB cord-271701-tx0lqgff 201 5 they -PRON- PRP cord-271701-tx0lqgff 201 6 first first RB cord-271701-tx0lqgff 201 7 purified purify VBD cord-271701-tx0lqgff 201 8 and and CC cord-271701-tx0lqgff 201 9 analysed analyse VBD cord-271701-tx0lqgff 201 10 His -PRON- PRP$ cord-271701-tx0lqgff 201 11 - - HYPH cord-271701-tx0lqgff 201 12 nsp8 nsp8 NN cord-271701-tx0lqgff 201 13 . . . cord-271701-tx0lqgff 202 1 To to TO cord-271701-tx0lqgff 202 2 investigate investigate VB cord-271701-tx0lqgff 202 3 whether whether IN cord-271701-tx0lqgff 202 4 this this DT cord-271701-tx0lqgff 202 5 difference difference NN cord-271701-tx0lqgff 202 6 could could MD cord-271701-tx0lqgff 202 7 be be VB cord-271701-tx0lqgff 202 8 attributed attribute VBN cord-271701-tx0lqgff 202 9 to to IN cord-271701-tx0lqgff 202 10 complex complex JJ cord-271701-tx0lqgff 202 11 formation formation NN cord-271701-tx0lqgff 202 12 with with IN cord-271701-tx0lqgff 202 13 nsp7 nsp7 NN cord-271701-tx0lqgff 202 14 or or CC cord-271701-tx0lqgff 202 15 the the DT cord-271701-tx0lqgff 202 16 removal removal NN cord-271701-tx0lqgff 202 17 of of IN cord-271701-tx0lqgff 202 18 the the DT cord-271701-tx0lqgff 202 19 affinity affinity NN cord-271701-tx0lqgff 202 20 tag tag NN cord-271701-tx0lqgff 202 21 , , , cord-271701-tx0lqgff 202 22 we -PRON- PRP cord-271701-tx0lqgff 202 23 performed perform VBD cord-271701-tx0lqgff 202 24 the the DT cord-271701-tx0lqgff 202 25 primer primer NN cord-271701-tx0lqgff 202 26 extension extension NN cord-271701-tx0lqgff 202 27 assay assay NN cord-271701-tx0lqgff 202 28 with with IN cord-271701-tx0lqgff 202 29 three three CD cord-271701-tx0lqgff 202 30 different different JJ cord-271701-tx0lqgff 202 31 recombinant recombinant JJ cord-271701-tx0lqgff 202 32 nsp8 nsp8 JJ cord-271701-tx0lqgff 202 33 versions version NNS cord-271701-tx0lqgff 202 34 of of IN cord-271701-tx0lqgff 202 35 which which WDT cord-271701-tx0lqgff 202 36 the the DT cord-271701-tx0lqgff 202 37 gel gel NN cord-271701-tx0lqgff 202 38 filtration filtration NN cord-271701-tx0lqgff 202 39 analysis analysis NN cord-271701-tx0lqgff 202 40 is be VBZ cord-271701-tx0lqgff 202 41 documented document VBN cord-271701-tx0lqgff 202 42 in in IN cord-271701-tx0lqgff 202 43 Figure figure NN cord-271701-tx0lqgff 202 44 2 2 CD cord-271701-tx0lqgff 202 45 . . . cord-271701-tx0lqgff 203 1 Interestingly interestingly RB cord-271701-tx0lqgff 203 2 , , , cord-271701-tx0lqgff 203 3 for for IN cord-271701-tx0lqgff 203 4 all all DT cord-271701-tx0lqgff 203 5 three three CD cord-271701-tx0lqgff 203 6 variants variant NNS cord-271701-tx0lqgff 203 7 primer primer NN cord-271701-tx0lqgff 203 8 - - HYPH cord-271701-tx0lqgff 203 9 extension extension NN cord-271701-tx0lqgff 203 10 activity activity NN cord-271701-tx0lqgff 203 11 was be VBD cord-271701-tx0lqgff 203 12 observed observe VBN cord-271701-tx0lqgff 203 13 ( ( -LRB- cord-271701-tx0lqgff 203 14 Figure figure NN cord-271701-tx0lqgff 203 15 7A 7a NN cord-271701-tx0lqgff 203 16 ) ) -RRB- cord-271701-tx0lqgff 203 17 , , , cord-271701-tx0lqgff 203 18 but but CC cord-271701-tx0lqgff 203 19 the the DT cord-271701-tx0lqgff 203 20 activity activity NN cord-271701-tx0lqgff 203 21 was be VBD cord-271701-tx0lqgff 203 22 most most RBS cord-271701-tx0lqgff 203 23 pronounced pronounce VBN cord-271701-tx0lqgff 203 24 for for IN cord-271701-tx0lqgff 203 25 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 203 26 and and CC cord-271701-tx0lqgff 203 27 the the DT cord-271701-tx0lqgff 203 28 untagged untagged JJ cord-271701-tx0lqgff 203 29 nsp8 nsp8 NN cord-271701-tx0lqgff 204 1 ( ( -LRB- cord-271701-tx0lqgff 204 2 Figure figure NN cord-271701-tx0lqgff 204 3 7A 7a NN cord-271701-tx0lqgff 204 4 ) ) -RRB- cord-271701-tx0lqgff 204 5 . . . cord-271701-tx0lqgff 205 1 To to TO cord-271701-tx0lqgff 205 2 estimate estimate VB cord-271701-tx0lqgff 205 3 the the DT cord-271701-tx0lqgff 205 4 effect effect NN cord-271701-tx0lqgff 205 5 of of IN cord-271701-tx0lqgff 205 6 nsp7 nsp7 NN cord-271701-tx0lqgff 205 7 on on IN cord-271701-tx0lqgff 205 8 the the DT cord-271701-tx0lqgff 205 9 nsp8-driven nsp8-driven NNP cord-271701-tx0lqgff 205 10 primer primer NN cord-271701-tx0lqgff 205 11 extension extension NN cord-271701-tx0lqgff 205 12 activity activity NN cord-271701-tx0lqgff 205 13 , , , cord-271701-tx0lqgff 205 14 we -PRON- PRP cord-271701-tx0lqgff 205 15 performed perform VBD cord-271701-tx0lqgff 205 16 a a DT cord-271701-tx0lqgff 205 17 direct direct JJ cord-271701-tx0lqgff 205 18 comparison comparison NN cord-271701-tx0lqgff 205 19 of of IN cord-271701-tx0lqgff 205 20 the the DT cord-271701-tx0lqgff 205 21 two two CD cord-271701-tx0lqgff 205 22 enzyme enzyme NN cord-271701-tx0lqgff 205 23 complexes complex NNS cord-271701-tx0lqgff 205 24 and and CC cord-271701-tx0lqgff 205 25 found find VBD cord-271701-tx0lqgff 205 26 that that IN cord-271701-tx0lqgff 205 27 the the DT cord-271701-tx0lqgff 205 28 activity activity NN cord-271701-tx0lqgff 205 29 of of IN cord-271701-tx0lqgff 205 30 nsp8 nsp8 NN cord-271701-tx0lqgff 205 31 alone alone JJ cord-271701-tx0lqgff 205 32 was be VBD cord-271701-tx0lqgff 205 33 > > XX cord-271701-tx0lqgff 205 34 2-fold 2-fold CD cord-271701-tx0lqgff 205 35 lower low JJR cord-271701-tx0lqgff 205 36 than than IN cord-271701-tx0lqgff 205 37 when when WRB cord-271701-tx0lqgff 205 38 nsp7 nsp7 JJ cord-271701-tx0lqgff 205 39 and and CC cord-271701-tx0lqgff 205 40 nsp8 nsp8 NN cord-271701-tx0lqgff 205 41 were be VBD cord-271701-tx0lqgff 205 42 present present JJ cord-271701-tx0lqgff 205 43 at at IN cord-271701-tx0lqgff 205 44 equal equal JJ cord-271701-tx0lqgff 205 45 molarity molarity NN cord-271701-tx0lqgff 205 46 in in IN cord-271701-tx0lqgff 205 47 the the DT cord-271701-tx0lqgff 205 48 reaction reaction NN cord-271701-tx0lqgff 205 49 ( ( -LRB- cord-271701-tx0lqgff 205 50 Figures figure NNS cord-271701-tx0lqgff 205 51 4D 4d CD cord-271701-tx0lqgff 205 52 and and CC cord-271701-tx0lqgff 205 53 7B 7B NNP cord-271701-tx0lqgff 205 54 ) ) -RRB- cord-271701-tx0lqgff 205 55 . . . cord-271701-tx0lqgff 206 1 A a DT cord-271701-tx0lqgff 206 2 similar similar JJ cord-271701-tx0lqgff 206 3 comparison comparison NN cord-271701-tx0lqgff 206 4 was be VBD cord-271701-tx0lqgff 206 5 performed perform VBN cord-271701-tx0lqgff 206 6 for for IN cord-271701-tx0lqgff 206 7 the the DT cord-271701-tx0lqgff 206 8 de de FW cord-271701-tx0lqgff 206 9 novo novo NNP cord-271701-tx0lqgff 206 10 activity activity NN cord-271701-tx0lqgff 206 11 of of IN cord-271701-tx0lqgff 206 12 nsp8 nsp8 NN cord-271701-tx0lqgff 206 13 , , , cord-271701-tx0lqgff 206 14 using use VBG cord-271701-tx0lqgff 206 15 the the DT cord-271701-tx0lqgff 206 16 assay assay NN cord-271701-tx0lqgff 206 17 published publish VBN cord-271701-tx0lqgff 206 18 by by IN cord-271701-tx0lqgff 206 19 Imbert Imbert NNP cord-271701-tx0lqgff 206 20 et et NNP cord-271701-tx0lqgff 206 21 al al NNP cord-271701-tx0lqgff 206 22 . . . cord-271701-tx0lqgff 207 1 ( ( -LRB- cord-271701-tx0lqgff 207 2 12 12 CD cord-271701-tx0lqgff 207 3 ) ) -RRB- cord-271701-tx0lqgff 207 4 and and CC cord-271701-tx0lqgff 207 5 taking take VBG cord-271701-tx0lqgff 207 6 the the DT cord-271701-tx0lqgff 207 7 first first JJ cord-271701-tx0lqgff 207 8 dinucleotide dinucleotide NN cord-271701-tx0lqgff 207 9 ( ( -LRB- cord-271701-tx0lqgff 207 10 pppGpA pppgpa CD cord-271701-tx0lqgff 207 11 ) ) -RRB- cord-271701-tx0lqgff 207 12 product product NN cord-271701-tx0lqgff 207 13 as as IN cord-271701-tx0lqgff 207 14 readout readout NN cord-271701-tx0lqgff 207 15 . . . cord-271701-tx0lqgff 208 1 Interestingly interestingly RB cord-271701-tx0lqgff 208 2 , , , cord-271701-tx0lqgff 208 3 both both CC cord-271701-tx0lqgff 208 4 nsp8 nsp8 NN cord-271701-tx0lqgff 208 5 and and CC cord-271701-tx0lqgff 208 6 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 208 7 + + SYM cord-271701-tx0lqgff 208 8 8 8 CD cord-271701-tx0lqgff 208 9 ) ) -RRB- cord-271701-tx0lqgff 208 10 synthesized synthesize VBD cord-271701-tx0lqgff 208 11 equal equal JJ cord-271701-tx0lqgff 208 12 amounts amount NNS cord-271701-tx0lqgff 208 13 of of IN cord-271701-tx0lqgff 208 14 the the DT cord-271701-tx0lqgff 208 15 pppGpA pppgpa SYM cord-271701-tx0lqgff 208 16 dinucleotide dinucleotide NN cord-271701-tx0lqgff 208 17 ( ( -LRB- cord-271701-tx0lqgff 208 18 Figure Figure NNP cord-271701-tx0lqgff 208 19 7C 7C NNP cord-271701-tx0lqgff 208 20 ) ) -RRB- cord-271701-tx0lqgff 208 21 , , , cord-271701-tx0lqgff 208 22 suggesting suggest VBG cord-271701-tx0lqgff 208 23 that that IN cord-271701-tx0lqgff 208 24 the the DT cord-271701-tx0lqgff 208 25 effect effect NN cord-271701-tx0lqgff 208 26 of of IN cord-271701-tx0lqgff 208 27 nsp8 nsp8 NN cord-271701-tx0lqgff 208 28 is be VBZ cord-271701-tx0lqgff 208 29 limited limit VBN cord-271701-tx0lqgff 208 30 to to IN cord-271701-tx0lqgff 208 31 the the DT cord-271701-tx0lqgff 208 32 primer primer NN cord-271701-tx0lqgff 208 33 - - HYPH cord-271701-tx0lqgff 208 34 extension extension NN cord-271701-tx0lqgff 208 35 activity activity NN cord-271701-tx0lqgff 208 36 of of IN cord-271701-tx0lqgff 208 37 nsp8 nsp8 NN cord-271701-tx0lqgff 208 38 . . . cord-271701-tx0lqgff 209 1 In in IN cord-271701-tx0lqgff 209 2 addition addition NN cord-271701-tx0lqgff 209 3 , , , cord-271701-tx0lqgff 209 4 we -PRON- PRP cord-271701-tx0lqgff 209 5 observed observe VBD cord-271701-tx0lqgff 209 6 that that IN cord-271701-tx0lqgff 209 7 the the DT cord-271701-tx0lqgff 209 8 de de FW cord-271701-tx0lqgff 209 9 novo novo NNP cord-271701-tx0lqgff 209 10 initiation initiation NN cord-271701-tx0lqgff 209 11 activity activity NN cord-271701-tx0lqgff 209 12 of of IN cord-271701-tx0lqgff 209 13 nsp8 nsp8 NN cord-271701-tx0lqgff 209 14 was be VBD cord-271701-tx0lqgff 209 15 $ $ $ cord-271701-tx0lqgff 209 16 2-fold 2-fold CD cord-271701-tx0lqgff 209 17 higher high JJR cord-271701-tx0lqgff 209 18 than than IN cord-271701-tx0lqgff 209 19 that that DT cord-271701-tx0lqgff 209 20 of of IN cord-271701-tx0lqgff 209 21 His -PRON- PRP$ cord-271701-tx0lqgff 209 22 - - HYPH cord-271701-tx0lqgff 209 23 nsp8 nsp8 NN cord-271701-tx0lqgff 209 24 ( ( -LRB- cord-271701-tx0lqgff 209 25 Figure figure NN cord-271701-tx0lqgff 209 26 7D 7D NNP cord-271701-tx0lqgff 209 27 ) ) -RRB- cord-271701-tx0lqgff 209 28 . . . cord-271701-tx0lqgff 210 1 Our -PRON- PRP$ cord-271701-tx0lqgff 210 2 comparative comparative JJ cord-271701-tx0lqgff 210 3 study study NN cord-271701-tx0lqgff 210 4 revealed reveal VBD cord-271701-tx0lqgff 210 5 that that IN cord-271701-tx0lqgff 210 6 the the DT cord-271701-tx0lqgff 210 7 N n CD cord-271701-tx0lqgff 210 8 - - HYPH cord-271701-tx0lqgff 210 9 terminal terminal NN cord-271701-tx0lqgff 210 10 His -PRON- PRP$ cord-271701-tx0lqgff 210 11 6 6 CD cord-271701-tx0lqgff 210 12 -tag -tag : cord-271701-tx0lqgff 210 13 of of IN cord-271701-tx0lqgff 210 14 His -PRON- PRP$ cord-271701-tx0lqgff 210 15 - - HYPH cord-271701-tx0lqgff 210 16 nsp8 nsp8 NN cord-271701-tx0lqgff 210 17 greatly greatly RB cord-271701-tx0lqgff 210 18 influences influence VBZ cord-271701-tx0lqgff 210 19 the the DT cord-271701-tx0lqgff 210 20 primerextension primerextension NN cord-271701-tx0lqgff 210 21 activity activity NN cord-271701-tx0lqgff 210 22 of of IN cord-271701-tx0lqgff 210 23 nsp8 nsp8 NN cord-271701-tx0lqgff 210 24 ( ( -LRB- cord-271701-tx0lqgff 210 25 Figure figure NN cord-271701-tx0lqgff 210 26 7A 7a NN cord-271701-tx0lqgff 210 27 ) ) -RRB- cord-271701-tx0lqgff 210 28 , , , cord-271701-tx0lqgff 210 29 its -PRON- PRP$ cord-271701-tx0lqgff 210 30 multimerization multimerization NN cord-271701-tx0lqgff 210 31 profile profile NN cord-271701-tx0lqgff 210 32 and and CC cord-271701-tx0lqgff 210 33 its -PRON- PRP$ cord-271701-tx0lqgff 210 34 association association NN cord-271701-tx0lqgff 210 35 with with IN cord-271701-tx0lqgff 210 36 nsp7 nsp7 NNP cord-271701-tx0lqgff 210 37 ( ( -LRB- cord-271701-tx0lqgff 210 38 Figure figure NN cord-271701-tx0lqgff 210 39 2 2 CD cord-271701-tx0lqgff 210 40 ) ) -RRB- cord-271701-tx0lqgff 210 41 . . . cord-271701-tx0lqgff 211 1 To to TO cord-271701-tx0lqgff 211 2 test test VB cord-271701-tx0lqgff 211 3 if if IN cord-271701-tx0lqgff 211 4 this this DT cord-271701-tx0lqgff 211 5 inhibitory inhibitory JJ cord-271701-tx0lqgff 211 6 effect effect NN cord-271701-tx0lqgff 211 7 was be VBD cord-271701-tx0lqgff 211 8 His -PRON- PRP$ cord-271701-tx0lqgff 211 9 6 6 CD cord-271701-tx0lqgff 211 10 -tag -tag RBS cord-271701-tx0lqgff 211 11 specific specific JJ cord-271701-tx0lqgff 211 12 , , , cord-271701-tx0lqgff 211 13 we -PRON- PRP cord-271701-tx0lqgff 211 14 assessed assess VBD cord-271701-tx0lqgff 211 15 the the DT cord-271701-tx0lqgff 211 16 activity activity NN cord-271701-tx0lqgff 211 17 of of IN cord-271701-tx0lqgff 211 18 a a DT cord-271701-tx0lqgff 211 19 ub ub NNP cord-271701-tx0lqgff 211 20 - - HYPH cord-271701-tx0lqgff 211 21 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 211 22 fusion fusion NN cord-271701-tx0lqgff 211 23 protein protein NN cord-271701-tx0lqgff 211 24 . . . cord-271701-tx0lqgff 212 1 At at IN cord-271701-tx0lqgff 212 2 the the DT cord-271701-tx0lqgff 212 3 same same JJ cord-271701-tx0lqgff 212 4 time time NN cord-271701-tx0lqgff 212 5 , , , cord-271701-tx0lqgff 212 6 control control NN cord-271701-tx0lqgff 212 7 reactions reaction NNS cord-271701-tx0lqgff 212 8 were be VBD cord-271701-tx0lqgff 212 9 performed perform VBN cord-271701-tx0lqgff 212 10 in in IN cord-271701-tx0lqgff 212 11 which which WDT cord-271701-tx0lqgff 212 12 we -PRON- PRP cord-271701-tx0lqgff 212 13 ( ( -LRB- cord-271701-tx0lqgff 212 14 i i NN cord-271701-tx0lqgff 212 15 ) ) -RRB- cord-271701-tx0lqgff 212 16 followed follow VBD cord-271701-tx0lqgff 212 17 the the DT cord-271701-tx0lqgff 212 18 activity activity NN cord-271701-tx0lqgff 212 19 of of IN cord-271701-tx0lqgff 212 20 this this DT cord-271701-tx0lqgff 212 21 protein protein NN cord-271701-tx0lqgff 212 22 as as IN cord-271701-tx0lqgff 212 23 it -PRON- PRP cord-271701-tx0lqgff 212 24 was be VBD cord-271701-tx0lqgff 212 25 being be VBG cord-271701-tx0lqgff 212 26 processed process VBN cord-271701-tx0lqgff 212 27 by by IN cord-271701-tx0lqgff 212 28 a a DT cord-271701-tx0lqgff 212 29 recombinant recombinant JJ cord-271701-tx0lqgff 212 30 form form NN cord-271701-tx0lqgff 212 31 of of IN cord-271701-tx0lqgff 212 32 the the DT cord-271701-tx0lqgff 212 33 ubiquitin ubiquitin NN cord-271701-tx0lqgff 212 34 - - HYPH cord-271701-tx0lqgff 212 35 cleaving cleave VBG cord-271701-tx0lqgff 212 36 nsp2 nsp2 JJR cord-271701-tx0lqgff 212 37 protease protease NN cord-271701-tx0lqgff 212 38 of of IN cord-271701-tx0lqgff 212 39 equine equine JJ cord-271701-tx0lqgff 212 40 arteritis arteritis NN cord-271701-tx0lqgff 212 41 virus virus NN cord-271701-tx0lqgff 212 42 ( ( -LRB- cord-271701-tx0lqgff 212 43 28 28 CD cord-271701-tx0lqgff 212 44 ) ) -RRB- cord-271701-tx0lqgff 212 45 or or CC cord-271701-tx0lqgff 212 46 ( ( -LRB- cord-271701-tx0lqgff 212 47 ii ii NN cord-271701-tx0lqgff 212 48 ) ) -RRB- cord-271701-tx0lqgff 212 49 monitored monitor VBD cord-271701-tx0lqgff 212 50 the the DT cord-271701-tx0lqgff 212 51 activity activity NN cord-271701-tx0lqgff 212 52 of of IN cord-271701-tx0lqgff 212 53 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 212 54 . . . cord-271701-tx0lqgff 213 1 As as IN cord-271701-tx0lqgff 213 2 shown show VBN cord-271701-tx0lqgff 213 3 in in IN cord-271701-tx0lqgff 213 4 Supplementary Supplementary NNP cord-271701-tx0lqgff 213 5 Figure Figure NNP cord-271701-tx0lqgff 213 6 S3 S3 NNP cord-271701-tx0lqgff 213 7 , , , cord-271701-tx0lqgff 213 8 the the DT cord-271701-tx0lqgff 213 9 presence presence NN cord-271701-tx0lqgff 213 10 of of IN cord-271701-tx0lqgff 213 11 the the DT cord-271701-tx0lqgff 213 12 ub ub NNP cord-271701-tx0lqgff 213 13 - - HYPH cord-271701-tx0lqgff 213 14 tag tag NN cord-271701-tx0lqgff 213 15 decreased decrease VBD cord-271701-tx0lqgff 213 16 nsp8 nsp8 JJ cord-271701-tx0lqgff 213 17 activity activity NN cord-271701-tx0lqgff 213 18 to to IN cord-271701-tx0lqgff 213 19 a a DT cord-271701-tx0lqgff 213 20 level level NN cord-271701-tx0lqgff 213 21 that that WDT cord-271701-tx0lqgff 213 22 was be VBD cord-271701-tx0lqgff 213 23 comparable comparable JJ cord-271701-tx0lqgff 213 24 to to IN cord-271701-tx0lqgff 213 25 that that DT cord-271701-tx0lqgff 213 26 of of IN cord-271701-tx0lqgff 213 27 N n NN cord-271701-tx0lqgff 213 28 - - HYPH cord-271701-tx0lqgff 213 29 terminally terminally RB cord-271701-tx0lqgff 213 30 His -PRON- PRP$ cord-271701-tx0lqgff 213 31 6 6 CD cord-271701-tx0lqgff 213 32 -tagged -tagged CD cord-271701-tx0lqgff 213 33 nsp8 nsp8 NN cord-271701-tx0lqgff 213 34 . . . cord-271701-tx0lqgff 214 1 Upon upon IN cord-271701-tx0lqgff 214 2 cleavage cleavage NN cord-271701-tx0lqgff 214 3 by by IN cord-271701-tx0lqgff 214 4 EAV EAV NNP cord-271701-tx0lqgff 214 5 nsp2 nsp2 NNP cord-271701-tx0lqgff 214 6 , , , cord-271701-tx0lqgff 214 7 however however RB cord-271701-tx0lqgff 214 8 , , , cord-271701-tx0lqgff 214 9 a a DT cord-271701-tx0lqgff 214 10 partial partial JJ cord-271701-tx0lqgff 214 11 recovery recovery NN cord-271701-tx0lqgff 214 12 of of IN cord-271701-tx0lqgff 214 13 the the DT cord-271701-tx0lqgff 214 14 primer primer NN cord-271701-tx0lqgff 214 15 extension extension NN cord-271701-tx0lqgff 214 16 activity activity NN cord-271701-tx0lqgff 214 17 was be VBD cord-271701-tx0lqgff 214 18 observed observe VBN cord-271701-tx0lqgff 214 19 ( ( -LRB- cord-271701-tx0lqgff 214 20 Supplementary supplementary JJ cord-271701-tx0lqgff 214 21 Figure Figure NNP cord-271701-tx0lqgff 214 22 S3 S3 NNP cord-271701-tx0lqgff 214 23 ) ) -RRB- cord-271701-tx0lqgff 214 24 . . . cord-271701-tx0lqgff 215 1 Unfortunately unfortunately RB cord-271701-tx0lqgff 215 2 , , , cord-271701-tx0lqgff 215 3 we -PRON- PRP cord-271701-tx0lqgff 215 4 were be VBD cord-271701-tx0lqgff 215 5 not not RB cord-271701-tx0lqgff 215 6 able able JJ cord-271701-tx0lqgff 215 7 to to TO cord-271701-tx0lqgff 215 8 perform perform VB cord-271701-tx0lqgff 215 9 the the DT cord-271701-tx0lqgff 215 10 same same JJ cord-271701-tx0lqgff 215 11 experiment experiment NN cord-271701-tx0lqgff 215 12 with with IN cord-271701-tx0lqgff 215 13 purified purify VBN cord-271701-tx0lqgff 215 14 ub ub NNP cord-271701-tx0lqgff 215 15 - - HYPH cord-271701-tx0lqgff 215 16 nsp8 nsp8 NNP cord-271701-tx0lqgff 215 17 , , , cord-271701-tx0lqgff 215 18 since since IN cord-271701-tx0lqgff 215 19 our -PRON- PRP$ cord-271701-tx0lqgff 215 20 recombinant recombinant JJ cord-271701-tx0lqgff 215 21 nsp5 nsp5 NN cord-271701-tx0lqgff 215 22 removed remove VBN cord-271701-tx0lqgff 215 23 the the DT cord-271701-tx0lqgff 215 24 N n CD cord-271701-tx0lqgff 215 25 - - HYPH cord-271701-tx0lqgff 215 26 terminal terminal JJ cord-271701-tx0lqgff 215 27 ub ub NNP cord-271701-tx0lqgff 215 28 - - HYPH cord-271701-tx0lqgff 215 29 tag tag NN cord-271701-tx0lqgff 215 30 with with IN cord-271701-tx0lqgff 215 31 similar similar JJ cord-271701-tx0lqgff 215 32 efficiency efficiency NN cord-271701-tx0lqgff 215 33 as as IN cord-271701-tx0lqgff 215 34 the the DT cord-271701-tx0lqgff 215 35 C C NNP cord-271701-tx0lqgff 215 36 - - HYPH cord-271701-tx0lqgff 215 37 terminal terminal NN cord-271701-tx0lqgff 216 1 His -PRON- PRP$ cord-271701-tx0lqgff 216 2 6 6 CD cord-271701-tx0lqgff 216 3 -tag -tag : cord-271701-tx0lqgff 216 4 ( ( -LRB- cord-271701-tx0lqgff 216 5 Supplementary supplementary JJ cord-271701-tx0lqgff 216 6 Figure Figure NNP cord-271701-tx0lqgff 216 7 S4 S4 NNP cord-271701-tx0lqgff 216 8 ) ) -RRB- cord-271701-tx0lqgff 216 9 . . . cord-271701-tx0lqgff 217 1 Extrapolating extrapolate VBG cord-271701-tx0lqgff 217 2 to to IN cord-271701-tx0lqgff 217 3 the the DT cord-271701-tx0lqgff 217 4 situation situation NN cord-271701-tx0lqgff 217 5 in in IN cord-271701-tx0lqgff 217 6 the the DT cord-271701-tx0lqgff 217 7 viral viral JJ cord-271701-tx0lqgff 217 8 pp1a pp1a NNP cord-271701-tx0lqgff 217 9 and and CC cord-271701-tx0lqgff 217 10 pp1ab pp1ab NNP cord-271701-tx0lqgff 217 11 precursor precursor NN cord-271701-tx0lqgff 217 12 polyproteins polyprotein NNS cord-271701-tx0lqgff 217 13 , , , cord-271701-tx0lqgff 217 14 in in IN cord-271701-tx0lqgff 217 15 which which WDT cord-271701-tx0lqgff 217 16 the the DT cord-271701-tx0lqgff 217 17 nsp8 nsp8 NNP cord-271701-tx0lqgff 217 18 N N NNP cord-271701-tx0lqgff 217 19 - - HYPH cord-271701-tx0lqgff 217 20 terminus terminus NN cord-271701-tx0lqgff 217 21 is be VBZ cord-271701-tx0lqgff 217 22 initially initially RB cord-271701-tx0lqgff 217 23 fused fuse VBN cord-271701-tx0lqgff 217 24 to to IN cord-271701-tx0lqgff 217 25 nsp7 nsp7 NNP cord-271701-tx0lqgff 217 26 ( ( -LRB- cord-271701-tx0lqgff 217 27 Figure figure NN cord-271701-tx0lqgff 217 28 1A 1a NN cord-271701-tx0lqgff 217 29 ) ) -RRB- cord-271701-tx0lqgff 217 30 , , , cord-271701-tx0lqgff 217 31 our -PRON- PRP$ cord-271701-tx0lqgff 217 32 observations observation NNS cord-271701-tx0lqgff 217 33 suggested suggest VBD cord-271701-tx0lqgff 217 34 that that IN cord-271701-tx0lqgff 217 35 nsp8 nsp8 NN cord-271701-tx0lqgff 217 36 may may MD cord-271701-tx0lqgff 217 37 thus thus RB cord-271701-tx0lqgff 217 38 be be VB cord-271701-tx0lqgff 217 39 inactive inactive JJ cord-271701-tx0lqgff 217 40 in in IN cord-271701-tx0lqgff 217 41 the the DT cord-271701-tx0lqgff 217 42 polyprotein polyprotein JJ cord-271701-tx0lqgff 217 43 context context NN cord-271701-tx0lqgff 217 44 . . . cord-271701-tx0lqgff 218 1 This this DT cord-271701-tx0lqgff 218 2 would would MD cord-271701-tx0lqgff 218 3 constitute constitute VB cord-271701-tx0lqgff 218 4 a a DT cord-271701-tx0lqgff 218 5 form form NN cord-271701-tx0lqgff 218 6 of of IN cord-271701-tx0lqgff 218 7 regulation regulation NN cord-271701-tx0lqgff 218 8 of of IN cord-271701-tx0lqgff 218 9 viral viral JJ cord-271701-tx0lqgff 218 10 enzyme enzyme NN cord-271701-tx0lqgff 218 11 activity activity NN cord-271701-tx0lqgff 218 12 that that WDT cord-271701-tx0lqgff 218 13 is be VBZ cord-271701-tx0lqgff 218 14 not not RB cord-271701-tx0lqgff 218 15 without without IN cord-271701-tx0lqgff 218 16 Figure figure NN cord-271701-tx0lqgff 218 17 6A 6a CD cord-271701-tx0lqgff 218 18 , , , cord-271701-tx0lqgff 218 19 presented present VBN cord-271701-tx0lqgff 218 20 as as IN cord-271701-tx0lqgff 218 21 the the DT cord-271701-tx0lqgff 218 22 amount amount NN cord-271701-tx0lqgff 218 23 of of IN cord-271701-tx0lqgff 218 24 NTP NTP NNP cord-271701-tx0lqgff 218 25 incorporated incorporate VBN cord-271701-tx0lqgff 218 26 per per IN cord-271701-tx0lqgff 218 27 mM mm CD cord-271701-tx0lqgff 218 28 nsp8 nsp8 JJ cord-271701-tx0lqgff 218 29 monomer monomer NN cord-271701-tx0lqgff 218 30 . . . cord-271701-tx0lqgff 219 1 Error error NN cord-271701-tx0lqgff 219 2 bars bar NNS cord-271701-tx0lqgff 219 3 represent represent VBP cord-271701-tx0lqgff 219 4 standard standard JJ cord-271701-tx0lqgff 219 5 deviations deviation NNS cord-271701-tx0lqgff 219 6 ( ( -LRB- cord-271701-tx0lqgff 219 7 n n NN cord-271701-tx0lqgff 219 8 = = SYM cord-271701-tx0lqgff 219 9 3 3 CD cord-271701-tx0lqgff 219 10 ) ) -RRB- cord-271701-tx0lqgff 219 11 . . . cord-271701-tx0lqgff 220 1 ( ( -LRB- cord-271701-tx0lqgff 220 2 C C NNP cord-271701-tx0lqgff 220 3 ) ) -RRB- cord-271701-tx0lqgff 221 1 The the DT cord-271701-tx0lqgff 221 2 influence influence NN cord-271701-tx0lqgff 221 3 of of IN cord-271701-tx0lqgff 221 4 the the DT cord-271701-tx0lqgff 221 5 pH pH NNP cord-271701-tx0lqgff 221 6 on on IN cord-271701-tx0lqgff 221 7 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 221 8 + + SYM cord-271701-tx0lqgff 221 9 8 8 CD cord-271701-tx0lqgff 221 10 ) ) -RRB- cord-271701-tx0lqgff 221 11 activity activity NN cord-271701-tx0lqgff 221 12 was be VBD cord-271701-tx0lqgff 221 13 tested test VBN cord-271701-tx0lqgff 221 14 for for IN cord-271701-tx0lqgff 221 15 a a DT cord-271701-tx0lqgff 221 16 pH pH NNP cord-271701-tx0lqgff 221 17 range range NN cord-271701-tx0lqgff 221 18 of of IN cord-271701-tx0lqgff 221 19 6 6 CD cord-271701-tx0lqgff 221 20 - - SYM cord-271701-tx0lqgff 221 21 11 11 CD cord-271701-tx0lqgff 221 22 . . . cord-271701-tx0lqgff 222 1 A a DT cord-271701-tx0lqgff 222 2 clear clear JJ cord-271701-tx0lqgff 222 3 optimum optimum NN cord-271701-tx0lqgff 222 4 was be VBD cord-271701-tx0lqgff 222 5 observed observe VBN cord-271701-tx0lqgff 222 6 around around IN cord-271701-tx0lqgff 222 7 9.5 9.5 CD cord-271701-tx0lqgff 222 8 . . . cord-271701-tx0lqgff 223 1 ( ( -LRB- cord-271701-tx0lqgff 223 2 D D NNP cord-271701-tx0lqgff 223 3 ) ) -RRB- cord-271701-tx0lqgff 223 4 Quantification quantification NN cord-271701-tx0lqgff 223 5 of of IN cord-271701-tx0lqgff 223 6 the the DT cord-271701-tx0lqgff 223 7 results result NNS cord-271701-tx0lqgff 223 8 in in IN cord-271701-tx0lqgff 223 9 Figure figure NN cord-271701-tx0lqgff 223 10 6C 6c NN cord-271701-tx0lqgff 223 11 , , , cord-271701-tx0lqgff 223 12 presented present VBN cord-271701-tx0lqgff 223 13 as as IN cord-271701-tx0lqgff 223 14 the the DT cord-271701-tx0lqgff 223 15 amount amount NN cord-271701-tx0lqgff 223 16 of of IN cord-271701-tx0lqgff 223 17 NTP NTP NNP cord-271701-tx0lqgff 223 18 incorporated incorporate VBN cord-271701-tx0lqgff 223 19 per per IN cord-271701-tx0lqgff 223 20 mM mm CD cord-271701-tx0lqgff 223 21 nsp8 nsp8 JJ cord-271701-tx0lqgff 223 22 monomer monomer NN cord-271701-tx0lqgff 223 23 . . . cord-271701-tx0lqgff 224 1 Error error NN cord-271701-tx0lqgff 224 2 bars bar NNS cord-271701-tx0lqgff 224 3 indicate indicate VBP cord-271701-tx0lqgff 224 4 standard standard JJ cord-271701-tx0lqgff 224 5 deviations deviation NNS cord-271701-tx0lqgff 224 6 ( ( -LRB- cord-271701-tx0lqgff 224 7 n n NN cord-271701-tx0lqgff 224 8 = = SYM cord-271701-tx0lqgff 224 9 3 3 CD cord-271701-tx0lqgff 224 10 ) ) -RRB- cord-271701-tx0lqgff 224 11 . . . cord-271701-tx0lqgff 225 1 ( ( -LRB- cord-271701-tx0lqgff 225 2 E e NN cord-271701-tx0lqgff 225 3 ) ) -RRB- cord-271701-tx0lqgff 226 1 Schematic schematic JJ cord-271701-tx0lqgff 226 2 presentation presentation NN cord-271701-tx0lqgff 226 3 of of IN cord-271701-tx0lqgff 226 4 the the DT cord-271701-tx0lqgff 226 5 pulse pulse NN cord-271701-tx0lqgff 226 6 - - HYPH cord-271701-tx0lqgff 226 7 chase chase NN cord-271701-tx0lqgff 226 8 experiment experiment NN cord-271701-tx0lqgff 226 9 that that WDT cord-271701-tx0lqgff 226 10 was be VBD cord-271701-tx0lqgff 226 11 used use VBN cord-271701-tx0lqgff 226 12 to to TO cord-271701-tx0lqgff 226 13 test test VB cord-271701-tx0lqgff 226 14 the the DT cord-271701-tx0lqgff 226 15 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 226 16 + + SYM cord-271701-tx0lqgff 226 17 8 8 CD cord-271701-tx0lqgff 226 18 ) ) -RRB- cord-271701-tx0lqgff 226 19 nucleotide nucleotide JJ cord-271701-tx0lqgff 226 20 incorporation incorporation NN cord-271701-tx0lqgff 226 21 specificity specificity NN cord-271701-tx0lqgff 226 22 on on IN cord-271701-tx0lqgff 226 23 a a DT cord-271701-tx0lqgff 226 24 primed primed JJ cord-271701-tx0lqgff 226 25 poly(U poly(u NN cord-271701-tx0lqgff 226 26 ) ) -RRB- cord-271701-tx0lqgff 226 27 template template NN cord-271701-tx0lqgff 226 28 ( ( -LRB- cord-271701-tx0lqgff 226 29 see see VB cord-271701-tx0lqgff 226 30 Table table NN cord-271701-tx0lqgff 226 31 1 1 CD cord-271701-tx0lqgff 226 32 ) ) -RRB- cord-271701-tx0lqgff 226 33 . . . cord-271701-tx0lqgff 227 1 The the DT cord-271701-tx0lqgff 227 2 reactions reaction NNS cord-271701-tx0lqgff 227 3 were be VBD cord-271701-tx0lqgff 227 4 initiated initiate VBN cord-271701-tx0lqgff 227 5 with with IN cord-271701-tx0lqgff 227 6 a a DT cord-271701-tx0lqgff 227 7 limiting limit VBG cord-271701-tx0lqgff 227 8 concentration concentration NN cord-271701-tx0lqgff 227 9 of of IN cord-271701-tx0lqgff 227 10 [ [ -LRB- cord-271701-tx0lqgff 227 11 a-32 a-32 NNP cord-271701-tx0lqgff 227 12 P]ATP P]ATP NNP cord-271701-tx0lqgff 227 13 to to TO cord-271701-tx0lqgff 227 14 allow allow VB cord-271701-tx0lqgff 227 15 the the DT cord-271701-tx0lqgff 227 16 formation formation NN cord-271701-tx0lqgff 227 17 of of IN cord-271701-tx0lqgff 227 18 a a DT cord-271701-tx0lqgff 227 19 stable stable JJ cord-271701-tx0lqgff 227 20 polymerase polymerase NN cord-271701-tx0lqgff 227 21 - - HYPH cord-271701-tx0lqgff 227 22 template template NN cord-271701-tx0lqgff 227 23 complex complex NN cord-271701-tx0lqgff 227 24 . . . cord-271701-tx0lqgff 228 1 Unlabelled unlabelled JJ cord-271701-tx0lqgff 228 2 nucleotides nucleotide NNS cord-271701-tx0lqgff 228 3 were be VBD cord-271701-tx0lqgff 228 4 used use VBN cord-271701-tx0lqgff 228 5 at at IN cord-271701-tx0lqgff 228 6 a a DT cord-271701-tx0lqgff 228 7 final final JJ cord-271701-tx0lqgff 228 8 concentration concentration NN cord-271701-tx0lqgff 228 9 of of IN cord-271701-tx0lqgff 228 10 50 50 CD cord-271701-tx0lqgff 228 11 mM. mM. NNS cord-271701-tx0lqgff 228 12 ( ( -LRB- cord-271701-tx0lqgff 228 13 F F NNP cord-271701-tx0lqgff 228 14 ) ) -RRB- cord-271701-tx0lqgff 228 15 SARS SARS NNP cord-271701-tx0lqgff 228 16 - - HYPH cord-271701-tx0lqgff 228 17 CoV CoV NNP cord-271701-tx0lqgff 228 18 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 228 19 + + SYM cord-271701-tx0lqgff 228 20 8 8 CD cord-271701-tx0lqgff 228 21 ) ) -RRB- cord-271701-tx0lqgff 228 22 allowed allow VBN cord-271701-tx0lqgff 228 23 only only RB cord-271701-tx0lqgff 228 24 limited limit VBN cord-271701-tx0lqgff 228 25 transversional transversional JJ cord-271701-tx0lqgff 228 26 and and CC cord-271701-tx0lqgff 228 27 transitional transitional JJ cord-271701-tx0lqgff 228 28 mutations mutation NNS cord-271701-tx0lqgff 228 29 . . . cord-271701-tx0lqgff 229 1 Use use NN cord-271701-tx0lqgff 229 2 of of IN cord-271701-tx0lqgff 229 3 manganese manganese NN cord-271701-tx0lqgff 229 4 ions ion NNS cord-271701-tx0lqgff 229 5 as as IN cord-271701-tx0lqgff 229 6 cofactor cofactor NN cord-271701-tx0lqgff 229 7 for for IN cord-271701-tx0lqgff 229 8 polymerase polymerase NN cord-271701-tx0lqgff 229 9 activity activity NN cord-271701-tx0lqgff 229 10 resulted result VBD cord-271701-tx0lqgff 229 11 in in IN cord-271701-tx0lqgff 229 12 a a DT cord-271701-tx0lqgff 229 13 minor minor JJ cord-271701-tx0lqgff 229 14 , , , cord-271701-tx0lqgff 229 15 though though IN cord-271701-tx0lqgff 229 16 noticeable noticeable JJ cord-271701-tx0lqgff 229 17 loss loss NN cord-271701-tx0lqgff 229 18 of of IN cord-271701-tx0lqgff 229 19 fidelity fidelity NN cord-271701-tx0lqgff 229 20 . . . cord-271701-tx0lqgff 230 1 Lane lane NN cord-271701-tx0lqgff 230 2 1 1 CD cord-271701-tx0lqgff 230 3 represents represent VBZ cord-271701-tx0lqgff 230 4 the the DT cord-271701-tx0lqgff 230 5 input input NN cord-271701-tx0lqgff 230 6 signal signal NN cord-271701-tx0lqgff 230 7 to to TO cord-271701-tx0lqgff 230 8 which which WDT cord-271701-tx0lqgff 230 9 no no DT cord-271701-tx0lqgff 230 10 unlabelled unlabelled JJ cord-271701-tx0lqgff 230 11 nucleotides nucleotide NNS cord-271701-tx0lqgff 230 12 were be VBD cord-271701-tx0lqgff 230 13 added add VBN cord-271701-tx0lqgff 230 14 . . . cord-271701-tx0lqgff 231 1 Nucleoside nucleoside NN cord-271701-tx0lqgff 231 2 triphosphates triphosphate NNS cord-271701-tx0lqgff 231 3 are be VBP cord-271701-tx0lqgff 231 4 abbreviated abbreviate VBN cord-271701-tx0lqgff 231 5 to to IN cord-271701-tx0lqgff 231 6 single single JJ cord-271701-tx0lqgff 231 7 letters letter NNS cord-271701-tx0lqgff 231 8 ( ( -LRB- cord-271701-tx0lqgff 231 9 i.e. i.e. FW cord-271701-tx0lqgff 231 10 A a NN cord-271701-tx0lqgff 231 11 for for IN cord-271701-tx0lqgff 231 12 ATP ATP NNP cord-271701-tx0lqgff 231 13 , , , cord-271701-tx0lqgff 231 14 G G NNP cord-271701-tx0lqgff 231 15 for for IN cord-271701-tx0lqgff 231 16 GTP GTP NNP cord-271701-tx0lqgff 231 17 , , , cord-271701-tx0lqgff 231 18 U U NNP cord-271701-tx0lqgff 231 19 for for IN cord-271701-tx0lqgff 231 20 UTP UTP NNP cord-271701-tx0lqgff 231 21 , , , cord-271701-tx0lqgff 231 22 C C NNP cord-271701-tx0lqgff 231 23 for for IN cord-271701-tx0lqgff 231 24 CTP CTP NNP cord-271701-tx0lqgff 231 25 and and CC cord-271701-tx0lqgff 231 26 R r NN cord-271701-tx0lqgff 231 27 for for IN cord-271701-tx0lqgff 231 28 RTP RTP NNP cord-271701-tx0lqgff 231 29 ) ) -RRB- cord-271701-tx0lqgff 231 30 . . . cord-271701-tx0lqgff 232 1 precedent precedent NN cord-271701-tx0lqgff 232 2 , , , cord-271701-tx0lqgff 232 3 since since IN cord-271701-tx0lqgff 232 4 also also RB cord-271701-tx0lqgff 232 5 the the DT cord-271701-tx0lqgff 232 6 poliovirus poliovirus NN cord-271701-tx0lqgff 232 7 3Dpol 3Dpol NNP cord-271701-tx0lqgff 232 8 is be VBZ cord-271701-tx0lqgff 232 9 inactive inactive JJ cord-271701-tx0lqgff 232 10 as as RB cord-271701-tx0lqgff 232 11 long long RB cord-271701-tx0lqgff 232 12 as as IN cord-271701-tx0lqgff 232 13 it -PRON- PRP cord-271701-tx0lqgff 232 14 is be VBZ cord-271701-tx0lqgff 232 15 fused fuse VBN cord-271701-tx0lqgff 232 16 to to IN cord-271701-tx0lqgff 232 17 the the DT cord-271701-tx0lqgff 232 18 3C 3C NNP cord-271701-tx0lqgff 232 19 protease protease NN cord-271701-tx0lqgff 232 20 in in IN cord-271701-tx0lqgff 232 21 the the DT cord-271701-tx0lqgff 232 22 3CD 3cd CD cord-271701-tx0lqgff 232 23 precursor precursor NN cord-271701-tx0lqgff 232 24 ( ( -LRB- cord-271701-tx0lqgff 232 25 29 29 CD cord-271701-tx0lqgff 232 26 ) ) -RRB- cord-271701-tx0lqgff 232 27 . . . cord-271701-tx0lqgff 233 1 To to TO cord-271701-tx0lqgff 233 2 verify verify VB cord-271701-tx0lqgff 233 3 this this DT cord-271701-tx0lqgff 233 4 hypothesis hypothesis NN cord-271701-tx0lqgff 233 5 , , , cord-271701-tx0lqgff 233 6 we -PRON- PRP cord-271701-tx0lqgff 233 7 expressed express VBD cord-271701-tx0lqgff 233 8 nsp7 nsp7 JJ cord-271701-tx0lqgff 233 9 - - HYPH cord-271701-tx0lqgff 233 10 8-His 8-His NNP cord-271701-tx0lqgff 233 11 and and CC cord-271701-tx0lqgff 233 12 tested test VBD cord-271701-tx0lqgff 233 13 this this DT cord-271701-tx0lqgff 233 14 protein protein NN cord-271701-tx0lqgff 233 15 for for IN cord-271701-tx0lqgff 233 16 RdRp RdRp NNP cord-271701-tx0lqgff 233 17 activity activity NN cord-271701-tx0lqgff 233 18 . . . cord-271701-tx0lqgff 234 1 Interestingly interestingly RB cord-271701-tx0lqgff 234 2 , , , cord-271701-tx0lqgff 234 3 this this DT cord-271701-tx0lqgff 234 4 fusion fusion NN cord-271701-tx0lqgff 234 5 protein protein NN cord-271701-tx0lqgff 234 6 , , , cord-271701-tx0lqgff 234 7 a a DT cord-271701-tx0lqgff 234 8 potential potential JJ cord-271701-tx0lqgff 234 9 intermediate intermediate NN cord-271701-tx0lqgff 234 10 of of IN cord-271701-tx0lqgff 234 11 CoV CoV NNP cord-271701-tx0lqgff 234 12 replicase replicase NNP cord-271701-tx0lqgff 234 13 polyprotein polyprotein NNP cord-271701-tx0lqgff 234 14 processing processing NNP cord-271701-tx0lqgff 234 15 and and CC cord-271701-tx0lqgff 234 16 a a DT cord-271701-tx0lqgff 234 17 multimer multimer NN cord-271701-tx0lqgff 234 18 in in IN cord-271701-tx0lqgff 234 19 solution solution NN cord-271701-tx0lqgff 234 20 ( ( -LRB- cord-271701-tx0lqgff 234 21 Figure Figure NNP cord-271701-tx0lqgff 234 22 7E 7E NNP cord-271701-tx0lqgff 234 23 ) ) -RRB- cord-271701-tx0lqgff 234 24 , , , cord-271701-tx0lqgff 234 25 showed show VBD cord-271701-tx0lqgff 234 26 primer primer NN cord-271701-tx0lqgff 234 27 extension extension NN cord-271701-tx0lqgff 234 28 activities activity NNS cord-271701-tx0lqgff 234 29 that that WDT cord-271701-tx0lqgff 234 30 were be VBD cord-271701-tx0lqgff 234 31 comparable comparable JJ cord-271701-tx0lqgff 234 32 to to IN cord-271701-tx0lqgff 234 33 or or CC cord-271701-tx0lqgff 234 34 higher high JJR cord-271701-tx0lqgff 234 35 than than IN cord-271701-tx0lqgff 234 36 the the DT cord-271701-tx0lqgff 234 37 activity activity NN cord-271701-tx0lqgff 234 38 of of IN cord-271701-tx0lqgff 234 39 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 234 40 + + SYM cord-271701-tx0lqgff 234 41 8-His 8-his NN cord-271701-tx0lqgff 234 42 ) ) -RRB- cord-271701-tx0lqgff 235 1 ( ( -LRB- cord-271701-tx0lqgff 235 2 Figure figure NN cord-271701-tx0lqgff 235 3 7F 7f CD cord-271701-tx0lqgff 235 4 ) ) -RRB- cord-271701-tx0lqgff 235 5 . . . cord-271701-tx0lqgff 236 1 The the DT cord-271701-tx0lqgff 236 2 de de FW cord-271701-tx0lqgff 236 3 novo novo NNP cord-271701-tx0lqgff 236 4 initiation initiation NN cord-271701-tx0lqgff 236 5 activity activity NN cord-271701-tx0lqgff 236 6 of of IN cord-271701-tx0lqgff 236 7 nsp7 nsp7 NNP cord-271701-tx0lqgff 236 8 - - HYPH cord-271701-tx0lqgff 236 9 8-His 8-His NNP cord-271701-tx0lqgff 236 10 was be VBD cord-271701-tx0lqgff 236 11 , , , cord-271701-tx0lqgff 236 12 however however RB cord-271701-tx0lqgff 236 13 , , , cord-271701-tx0lqgff 236 14 $ $ $ cord-271701-tx0lqgff 236 15 2-fold 2-fold CD cord-271701-tx0lqgff 236 16 lower low JJR cord-271701-tx0lqgff 236 17 than than IN cord-271701-tx0lqgff 236 18 the the DT cord-271701-tx0lqgff 236 19 activity activity NN cord-271701-tx0lqgff 236 20 of of IN cord-271701-tx0lqgff 236 21 nsp8 nsp8 NN cord-271701-tx0lqgff 236 22 and and CC cord-271701-tx0lqgff 236 23 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 236 24 + + SYM cord-271701-tx0lqgff 236 25 8 8 CD cord-271701-tx0lqgff 236 26 ) ) -RRB- cord-271701-tx0lqgff 237 1 ( ( -LRB- cord-271701-tx0lqgff 237 2 Figure Figure NNP cord-271701-tx0lqgff 237 3 7D 7D NNP cord-271701-tx0lqgff 237 4 ) ) -RRB- cord-271701-tx0lqgff 237 5 . . . cord-271701-tx0lqgff 238 1 In in IN cord-271701-tx0lqgff 238 2 conclusion conclusion NN cord-271701-tx0lqgff 238 3 , , , cord-271701-tx0lqgff 238 4 this this DT cord-271701-tx0lqgff 238 5 result result NN cord-271701-tx0lqgff 238 6 clearly clearly RB cord-271701-tx0lqgff 238 7 underlines underline VBZ cord-271701-tx0lqgff 238 8 that that IN cord-271701-tx0lqgff 238 9 the the DT cord-271701-tx0lqgff 238 10 two two CD cord-271701-tx0lqgff 238 11 N n CD cord-271701-tx0lqgff 238 12 - - HYPH cord-271701-tx0lqgff 238 13 terminal terminal NN cord-271701-tx0lqgff 238 14 fusion fusion NN cord-271701-tx0lqgff 238 15 partners partner NNS cord-271701-tx0lqgff 238 16 other other JJ cord-271701-tx0lqgff 238 17 than than IN cord-271701-tx0lqgff 238 18 nsp7 nsp7 PRP cord-271701-tx0lqgff 238 19 are be VBP cord-271701-tx0lqgff 238 20 specifically specifically RB cord-271701-tx0lqgff 238 21 detrimental detrimental JJ cord-271701-tx0lqgff 238 22 to to IN cord-271701-tx0lqgff 238 23 SARS SARS NNP cord-271701-tx0lqgff 238 24 - - HYPH cord-271701-tx0lqgff 238 25 CoV CoV NNP cord-271701-tx0lqgff 238 26 nsp8 nsp8 NNP cord-271701-tx0lqgff 238 27 primer primer NN cord-271701-tx0lqgff 238 28 - - HYPH cord-271701-tx0lqgff 238 29 dependent dependent JJ cord-271701-tx0lqgff 238 30 RdRp RdRp NNP cord-271701-tx0lqgff 238 31 activity activity NN cord-271701-tx0lqgff 238 32 in in IN cord-271701-tx0lqgff 238 33 vitro vitro FW cord-271701-tx0lqgff 238 34 . . . cord-271701-tx0lqgff 239 1 It -PRON- PRP cord-271701-tx0lqgff 239 2 also also RB cord-271701-tx0lqgff 239 3 demonstrates demonstrate VBZ cord-271701-tx0lqgff 239 4 that that DT cord-271701-tx0lqgff 239 5 nsp8 nsp8 NN cord-271701-tx0lqgff 239 6 alone alone RB cord-271701-tx0lqgff 239 7 may may MD cord-271701-tx0lqgff 239 8 be be VB cord-271701-tx0lqgff 239 9 sufficient sufficient JJ cord-271701-tx0lqgff 239 10 to to TO cord-271701-tx0lqgff 239 11 act act VB cord-271701-tx0lqgff 239 12 as as IN cord-271701-tx0lqgff 239 13 a a DT cord-271701-tx0lqgff 239 14 primase primase NN cord-271701-tx0lqgff 239 15 . . . cord-271701-tx0lqgff 240 1 The the DT cord-271701-tx0lqgff 240 2 complex complex JJ cord-271701-tx0lqgff 240 3 replication replication NN cord-271701-tx0lqgff 240 4 and and CC cord-271701-tx0lqgff 240 5 transcription transcription NN cord-271701-tx0lqgff 240 6 process process NN cord-271701-tx0lqgff 240 7 that that WDT cord-271701-tx0lqgff 240 8 coronaviruses coronaviruse NNS cord-271701-tx0lqgff 240 9 initiate initiate VBP cord-271701-tx0lqgff 240 10 upon upon IN cord-271701-tx0lqgff 240 11 infection infection NN cord-271701-tx0lqgff 240 12 involves involve VBZ cord-271701-tx0lqgff 240 13 up up IN cord-271701-tx0lqgff 240 14 to to TO cord-271701-tx0lqgff 240 15 16 16 CD cord-271701-tx0lqgff 240 16 viral viral JJ cord-271701-tx0lqgff 240 17 nsps nsp NNS cord-271701-tx0lqgff 240 18 and and CC cord-271701-tx0lqgff 240 19 at at IN cord-271701-tx0lqgff 240 20 least least RBS cord-271701-tx0lqgff 240 21 one one CD cord-271701-tx0lqgff 240 22 host host NN cord-271701-tx0lqgff 240 23 factor factor NN cord-271701-tx0lqgff 240 24 ( ( -LRB- cord-271701-tx0lqgff 240 25 30 30 CD cord-271701-tx0lqgff 240 26 ) ) -RRB- cord-271701-tx0lqgff 240 27 ( ( -LRB- cord-271701-tx0lqgff 240 28 31 31 CD cord-271701-tx0lqgff 240 29 ) ) -RRB- cord-271701-tx0lqgff 240 30 ( ( -LRB- cord-271701-tx0lqgff 240 31 32 32 CD cord-271701-tx0lqgff 240 32 ) ) -RRB- cord-271701-tx0lqgff 240 33 . . . cord-271701-tx0lqgff 241 1 Both both DT cord-271701-tx0lqgff 241 2 individually individually RB cord-271701-tx0lqgff 241 3 as as RB cord-271701-tx0lqgff 241 4 well well RB cord-271701-tx0lqgff 241 5 as as IN cord-271701-tx0lqgff 241 6 in in IN cord-271701-tx0lqgff 241 7 complex complex NN cord-271701-tx0lqgff 241 8 with with IN cord-271701-tx0lqgff 241 9 each each DT cord-271701-tx0lqgff 241 10 other other JJ cord-271701-tx0lqgff 241 11 , , , cord-271701-tx0lqgff 241 12 these these DT cord-271701-tx0lqgff 241 13 subunits subunit NNS cord-271701-tx0lqgff 241 14 engage engage VBP cord-271701-tx0lqgff 241 15 in in IN cord-271701-tx0lqgff 241 16 numerous numerous JJ cord-271701-tx0lqgff 241 17 protein protein NN cord-271701-tx0lqgff 241 18 - - HYPH cord-271701-tx0lqgff 241 19 protein protein NN cord-271701-tx0lqgff 241 20 interactions interaction NNS cord-271701-tx0lqgff 241 21 ( ( -LRB- cord-271701-tx0lqgff 241 22 17 17 CD cord-271701-tx0lqgff 241 23 , , , cord-271701-tx0lqgff 241 24 33 33 CD cord-271701-tx0lqgff 241 25 ) ) -RRB- cord-271701-tx0lqgff 241 26 and and CC cord-271701-tx0lqgff 241 27 embody embody VB cord-271701-tx0lqgff 241 28 various various JJ cord-271701-tx0lqgff 241 29 enzymatic enzymatic JJ cord-271701-tx0lqgff 241 30 activities activity NNS cord-271701-tx0lqgff 241 31 , , , cord-271701-tx0lqgff 241 32 including include VBG cord-271701-tx0lqgff 241 33 proteolytic proteolytic JJ cord-271701-tx0lqgff 241 34 ( ( -LRB- cord-271701-tx0lqgff 241 35 19 19 CD cord-271701-tx0lqgff 241 36 , , , cord-271701-tx0lqgff 241 37 34 34 CD cord-271701-tx0lqgff 241 38 ) ) -RRB- cord-271701-tx0lqgff 241 39 , , , cord-271701-tx0lqgff 241 40 ATPase ATPase NNP cord-271701-tx0lqgff 241 41 ( ( -LRB- cord-271701-tx0lqgff 241 42 35 35 CD cord-271701-tx0lqgff 241 43 ) ) -RRB- cord-271701-tx0lqgff 241 44 , , , cord-271701-tx0lqgff 241 45 and and CC cord-271701-tx0lqgff 241 46 5 5 CD cord-271701-tx0lqgff 241 47 0 0 CD cord-271701-tx0lqgff 241 48 cap cap NN cord-271701-tx0lqgff 241 49 modifying modify VBG cord-271701-tx0lqgff 241 50 reactions reaction NNS cord-271701-tx0lqgff 241 51 ( ( -LRB- cord-271701-tx0lqgff 241 52 36 36 CD cord-271701-tx0lqgff 241 53 ) ) -RRB- cord-271701-tx0lqgff 241 54 . . . cord-271701-tx0lqgff 242 1 Remarkably remarkably RB cord-271701-tx0lqgff 242 2 though though RB cord-271701-tx0lqgff 242 3 , , , cord-271701-tx0lqgff 242 4 the the DT cord-271701-tx0lqgff 242 5 mechanism mechanism NN cord-271701-tx0lqgff 242 6 and and CC cord-271701-tx0lqgff 242 7 enzymes enzyme NNS cord-271701-tx0lqgff 242 8 required require VBN cord-271701-tx0lqgff 242 9 to to TO cord-271701-tx0lqgff 242 10 catalyse catalyse VB cord-271701-tx0lqgff 242 11 RNA RNA NNP cord-271701-tx0lqgff 242 12 synthesis synthesis NN cord-271701-tx0lqgff 242 13 in in IN cord-271701-tx0lqgff 242 14 the the DT cord-271701-tx0lqgff 242 15 CoV cov NN cord-271701-tx0lqgff 242 16 RTC RTC NNP cord-271701-tx0lqgff 242 17 remain remain VBP cord-271701-tx0lqgff 242 18 very very RB cord-271701-tx0lqgff 242 19 poorly poorly RB cord-271701-tx0lqgff 242 20 understood understand VBN cord-271701-tx0lqgff 242 21 . . . cord-271701-tx0lqgff 243 1 Moreover moreover RB cord-271701-tx0lqgff 243 2 , , , cord-271701-tx0lqgff 243 3 uniquely uniquely RB cord-271701-tx0lqgff 243 4 among among IN cord-271701-tx0lqgff 243 5 RNA RNA NNP cord-271701-tx0lqgff 243 6 viruses virus NNS cord-271701-tx0lqgff 243 7 which which WDT cord-271701-tx0lqgff 243 8 generally generally RB cord-271701-tx0lqgff 243 9 employ employ VBP cord-271701-tx0lqgff 243 10 a a DT cord-271701-tx0lqgff 243 11 single single JJ cord-271701-tx0lqgff 243 12 RNA RNA NNP cord-271701-tx0lqgff 243 13 polymerase polymerase NN cord-271701-tx0lqgff 243 14 to to TO cord-271701-tx0lqgff 243 15 drive drive VB cord-271701-tx0lqgff 243 16 their -PRON- PRP$ cord-271701-tx0lqgff 243 17 RNA RNA NNP cord-271701-tx0lqgff 243 18 synthesis synthesis NN cord-271701-tx0lqgff 243 19 ( ( -LRB- cord-271701-tx0lqgff 243 20 1 1 CD cord-271701-tx0lqgff 243 21 , , , cord-271701-tx0lqgff 243 22 2 2 CD cord-271701-tx0lqgff 243 23 ) ) -RRB- cord-271701-tx0lqgff 243 24 , , , cord-271701-tx0lqgff 243 25 the the DT cord-271701-tx0lqgff 243 26 polymerase polymerase NN cord-271701-tx0lqgff 243 27 activity activity NN cord-271701-tx0lqgff 243 28 assays assay NNS cord-271701-tx0lqgff 243 29 and and CC cord-271701-tx0lqgff 243 30 nsp8 nsp8 NN cord-271701-tx0lqgff 243 31 mutagenesis mutagenesis NN cord-271701-tx0lqgff 243 32 documented document VBN cord-271701-tx0lqgff 243 33 in in IN cord-271701-tx0lqgff 243 34 this this DT cord-271701-tx0lqgff 243 35 and and CC cord-271701-tx0lqgff 243 36 other other JJ cord-271701-tx0lqgff 243 37 studies study NNS cord-271701-tx0lqgff 243 38 suggest suggest VBP cord-271701-tx0lqgff 243 39 that that IN cord-271701-tx0lqgff 243 40 , , , cord-271701-tx0lqgff 243 41 in in IN cord-271701-tx0lqgff 243 42 addition addition NN cord-271701-tx0lqgff 243 43 to to IN cord-271701-tx0lqgff 243 44 the the DT cord-271701-tx0lqgff 243 45 presumed presume VBN cord-271701-tx0lqgff 243 46 nsp12 nsp12 NNP cord-271701-tx0lqgff 243 47 ' ' POS cord-271701-tx0lqgff 243 48 main main JJ cord-271701-tx0lqgff 243 49 RdRp RdRp NNP cord-271701-tx0lqgff 243 50 ' ' '' cord-271701-tx0lqgff 243 51 , , , cord-271701-tx0lqgff 243 52 other other JJ cord-271701-tx0lqgff 243 53 polymerase polymerase NN cord-271701-tx0lqgff 243 54 activities activity NNS cord-271701-tx0lqgff 243 55 could could MD cord-271701-tx0lqgff 243 56 play play VB cord-271701-tx0lqgff 243 57 a a DT cord-271701-tx0lqgff 243 58 critical critical JJ cord-271701-tx0lqgff 243 59 role role NN cord-271701-tx0lqgff 243 60 in in IN cord-271701-tx0lqgff 243 61 the the DT cord-271701-tx0lqgff 243 62 synthesis synthesis NN cord-271701-tx0lqgff 243 63 of of IN cord-271701-tx0lqgff 243 64 SARS SARS NNP cord-271701-tx0lqgff 243 65 - - HYPH cord-271701-tx0lqgff 243 66 CoV CoV NNP cord-271701-tx0lqgff 243 67 RNAs rna NNS cord-271701-tx0lqgff 243 68 ( ( -LRB- cord-271701-tx0lqgff 243 69 10 10 CD cord-271701-tx0lqgff 243 70 , , , cord-271701-tx0lqgff 243 71 12 12 CD cord-271701-tx0lqgff 243 72 , , , cord-271701-tx0lqgff 243 73 37 37 CD cord-271701-tx0lqgff 243 74 , , , cord-271701-tx0lqgff 243 75 38 38 CD cord-271701-tx0lqgff 243 76 ) ) -RRB- cord-271701-tx0lqgff 243 77 . . . cord-271701-tx0lqgff 244 1 Following follow VBG cord-271701-tx0lqgff 244 2 up up RP cord-271701-tx0lqgff 244 3 on on IN cord-271701-tx0lqgff 244 4 the the DT cord-271701-tx0lqgff 244 5 description description NN cord-271701-tx0lqgff 244 6 of of IN cord-271701-tx0lqgff 244 7 an an DT cord-271701-tx0lqgff 244 8 nsp8-and nsp8-and DT cord-271701-tx0lqgff 244 9 nsp7-containing nsp7-containing NNP cord-271701-tx0lqgff 244 10 hexadecameric hexadecameric NNP cord-271701-tx0lqgff 244 11 ring ring NN cord-271701-tx0lqgff 244 12 structure structure NN cord-271701-tx0lqgff 244 13 ( ( -LRB- cord-271701-tx0lqgff 244 14 13 13 CD cord-271701-tx0lqgff 244 15 ) ) -RRB- cord-271701-tx0lqgff 244 16 and and CC cord-271701-tx0lqgff 244 17 the the DT cord-271701-tx0lqgff 244 18 nsp8-associated nsp8-associated NNP cord-271701-tx0lqgff 244 19 polymerase polymerase NN cord-271701-tx0lqgff 244 20 activity activity NN cord-271701-tx0lqgff 244 21 ( ( -LRB- cord-271701-tx0lqgff 244 22 12 12 CD cord-271701-tx0lqgff 244 23 ) ) -RRB- cord-271701-tx0lqgff 244 24 , , , cord-271701-tx0lqgff 244 25 we -PRON- PRP cord-271701-tx0lqgff 244 26 here here RB cord-271701-tx0lqgff 244 27 demonstrate demonstrate VBP cord-271701-tx0lqgff 244 28 that that IN cord-271701-tx0lqgff 244 29 the the DT cord-271701-tx0lqgff 244 30 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 244 31 + + SYM cord-271701-tx0lqgff 244 32 8 8 CD cord-271701-tx0lqgff 244 33 ) ) -RRB- cord-271701-tx0lqgff 244 34 hexadecamer hexadecamer NNP cord-271701-tx0lqgff 244 35 is be VBZ cord-271701-tx0lqgff 244 36 the the DT cord-271701-tx0lqgff 244 37 most most RBS cord-271701-tx0lqgff 244 38 probable probable JJ cord-271701-tx0lqgff 244 39 conformation conformation NN cord-271701-tx0lqgff 244 40 of of IN cord-271701-tx0lqgff 244 41 the the DT cord-271701-tx0lqgff 244 42 second second JJ cord-271701-tx0lqgff 244 43 SARS SARS NNP cord-271701-tx0lqgff 244 44 - - HYPH cord-271701-tx0lqgff 244 45 CoV CoV NNP cord-271701-tx0lqgff 244 46 polymerase polymerase NN cord-271701-tx0lqgff 244 47 , , , cord-271701-tx0lqgff 244 48 given give VBN cord-271701-tx0lqgff 244 49 the the DT cord-271701-tx0lqgff 244 50 near near RB cord-271701-tx0lqgff 244 51 - - HYPH cord-271701-tx0lqgff 244 52 complete complete NN cord-271701-tx0lqgff 244 53 association association NN cord-271701-tx0lqgff 244 54 of of IN cord-271701-tx0lqgff 244 55 nsp7 nsp7 NNP cord-271701-tx0lqgff 244 56 and and CC cord-271701-tx0lqgff 244 57 nsp8 nsp8 NN cord-271701-tx0lqgff 244 58 when when WRB cord-271701-tx0lqgff 244 59 mixed mix VBN cord-271701-tx0lqgff 244 60 1:1 1:1 CD cord-271701-tx0lqgff 244 61 in in IN cord-271701-tx0lqgff 244 62 solution solution NN cord-271701-tx0lqgff 244 63 ( ( -LRB- cord-271701-tx0lqgff 244 64 Figure figure NN cord-271701-tx0lqgff 244 65 2F 2f NN cord-271701-tx0lqgff 244 66 ) ) -RRB- cord-271701-tx0lqgff 244 67 . . . cord-271701-tx0lqgff 245 1 Significant significant JJ cord-271701-tx0lqgff 245 2 for for IN cord-271701-tx0lqgff 245 3 our -PRON- PRP$ cord-271701-tx0lqgff 245 4 understanding understanding NN cord-271701-tx0lqgff 245 5 of of IN cord-271701-tx0lqgff 245 6 CoV CoV NNP cord-271701-tx0lqgff 245 7 RNA RNA NNP cord-271701-tx0lqgff 245 8 synthesis synthesis NN cord-271701-tx0lqgff 245 9 , , , cord-271701-tx0lqgff 245 10 we -PRON- PRP cord-271701-tx0lqgff 245 11 find find VBP cord-271701-tx0lqgff 245 12 that that IN cord-271701-tx0lqgff 245 13 this this DT cord-271701-tx0lqgff 245 14 complex complex NN cord-271701-tx0lqgff 245 15 is be VBZ cord-271701-tx0lqgff 245 16 capable capable JJ cord-271701-tx0lqgff 245 17 of of IN cord-271701-tx0lqgff 245 18 binding bind VBG cord-271701-tx0lqgff 245 19 dsRNA dsrna NN cord-271701-tx0lqgff 245 20 molecules molecule NNS cord-271701-tx0lqgff 245 21 and and CC cord-271701-tx0lqgff 245 22 extending extend VBG cord-271701-tx0lqgff 245 23 partially partially RB cord-271701-tx0lqgff 245 24 double double RB cord-271701-tx0lqgff 245 25 - - HYPH cord-271701-tx0lqgff 245 26 stranded strand VBN cord-271701-tx0lqgff 245 27 RNA rna NN cord-271701-tx0lqgff 245 28 templates template NNS cord-271701-tx0lqgff 245 29 . . . cord-271701-tx0lqgff 246 1 This this DT cord-271701-tx0lqgff 246 2 activity activity NN cord-271701-tx0lqgff 246 3 is be VBZ cord-271701-tx0lqgff 246 4 therefore therefore RB cord-271701-tx0lqgff 246 5 essentially essentially RB cord-271701-tx0lqgff 246 6 comparable comparable JJ cord-271701-tx0lqgff 246 7 to to IN cord-271701-tx0lqgff 246 8 the the DT cord-271701-tx0lqgff 246 9 activity activity NN cord-271701-tx0lqgff 246 10 reported report VBN cord-271701-tx0lqgff 246 11 for for IN cord-271701-tx0lqgff 246 12 the the DT cord-271701-tx0lqgff 246 13 nsp12-RdRp nsp12-rdrp NN cord-271701-tx0lqgff 246 14 ( ( -LRB- cord-271701-tx0lqgff 246 15 10 10 CD cord-271701-tx0lqgff 246 16 ) ) -RRB- cord-271701-tx0lqgff 246 17 . . . cord-271701-tx0lqgff 247 1 A a DT cord-271701-tx0lqgff 247 2 direct direct JJ cord-271701-tx0lqgff 247 3 comparison comparison NN cord-271701-tx0lqgff 247 4 with with IN cord-271701-tx0lqgff 247 5 the the DT cord-271701-tx0lqgff 247 6 nsp12 nsp12 CD cord-271701-tx0lqgff 247 7 activity activity NN cord-271701-tx0lqgff 247 8 is be VBZ cord-271701-tx0lqgff 247 9 difficult difficult JJ cord-271701-tx0lqgff 247 10 , , , cord-271701-tx0lqgff 247 11 however however RB cord-271701-tx0lqgff 247 12 . . . cord-271701-tx0lqgff 248 1 In in IN cord-271701-tx0lqgff 248 2 the the DT cord-271701-tx0lqgff 248 3 course course NN cord-271701-tx0lqgff 248 4 of of IN cord-271701-tx0lqgff 248 5 a a DT cord-271701-tx0lqgff 248 6 one one CD cord-271701-tx0lqgff 248 7 - - HYPH cord-271701-tx0lqgff 248 8 hour hour NN cord-271701-tx0lqgff 248 9 reaction reaction NN cord-271701-tx0lqgff 248 10 , , , cord-271701-tx0lqgff 248 11 0.1 0.1 CD cord-271701-tx0lqgff 248 12 mM mm CD cord-271701-tx0lqgff 248 13 monomeric monomeric JJ cord-271701-tx0lqgff 248 14 nsp12-RdRp nsp12-RdRp NNP cord-271701-tx0lqgff 248 15 incorporates incorporate VBZ cord-271701-tx0lqgff 248 16 $ $ $ cord-271701-tx0lqgff 248 17 2 2 CD cord-271701-tx0lqgff 248 18 mM mm CD cord-271701-tx0lqgff 248 19 NMP NMP NNP cord-271701-tx0lqgff 248 20 into into IN cord-271701-tx0lqgff 248 21 a a DT cord-271701-tx0lqgff 248 22 primed primed JJ cord-271701-tx0lqgff 248 23 ( ( -LRB- cord-271701-tx0lqgff 248 24 CU cu NN cord-271701-tx0lqgff 248 25 ) ) -RRB- cord-271701-tx0lqgff 248 26 10 10 CD cord-271701-tx0lqgff 248 27 template template NN cord-271701-tx0lqgff 248 28 ( ( -LRB- cord-271701-tx0lqgff 248 29 10 10 CD cord-271701-tx0lqgff 248 30 ) ) -RRB- cord-271701-tx0lqgff 248 31 . . . cord-271701-tx0lqgff 249 1 The the DT cord-271701-tx0lqgff 249 2 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 249 3 + + SYM cord-271701-tx0lqgff 249 4 8 8 CD cord-271701-tx0lqgff 249 5 ) ) -RRB- cord-271701-tx0lqgff 249 6 complex complex NN cord-271701-tx0lqgff 249 7 , , , cord-271701-tx0lqgff 249 8 at at IN cord-271701-tx0lqgff 249 9 a a DT cord-271701-tx0lqgff 249 10 1 1 CD cord-271701-tx0lqgff 249 11 mM mm CD cord-271701-tx0lqgff 249 12 concentration concentration NN cord-271701-tx0lqgff 249 13 of of IN cord-271701-tx0lqgff 249 14 nsp7 nsp7 NN cord-271701-tx0lqgff 249 15 and and CC cord-271701-tx0lqgff 249 16 nsp8 nsp8 JJ cord-271701-tx0lqgff 249 17 monomers monomer NNS cord-271701-tx0lqgff 249 18 , , , cord-271701-tx0lqgff 249 19 incorporates incorporate VBZ cord-271701-tx0lqgff 249 20 $ $ $ cord-271701-tx0lqgff 249 21 1 1 CD cord-271701-tx0lqgff 249 22 mM mm CD cord-271701-tx0lqgff 249 23 NMP NMP NNP cord-271701-tx0lqgff 249 24 . . . cord-271701-tx0lqgff 250 1 Per per IN cord-271701-tx0lqgff 250 2 monomer monomer NN cord-271701-tx0lqgff 250 3 , , , cord-271701-tx0lqgff 250 4 the the DT cord-271701-tx0lqgff 250 5 activity activity NN cord-271701-tx0lqgff 250 6 difference difference NN cord-271701-tx0lqgff 250 7 is be VBZ cord-271701-tx0lqgff 250 8 therefore therefore RB cord-271701-tx0lqgff 250 9 20-fold 20-fold CD cord-271701-tx0lqgff 250 10 , , , cord-271701-tx0lqgff 250 11 but but CC cord-271701-tx0lqgff 250 12 if if IN cord-271701-tx0lqgff 250 13 we -PRON- PRP cord-271701-tx0lqgff 250 14 assume assume VBP cord-271701-tx0lqgff 250 15 that that IN cord-271701-tx0lqgff 250 16 most most RBS cord-271701-tx0lqgff 250 17 nsp7 nsp7 JJ cord-271701-tx0lqgff 250 18 and and CC cord-271701-tx0lqgff 250 19 nsp8 nsp8 NN cord-271701-tx0lqgff 250 20 monomers monomer NNS cord-271701-tx0lqgff 250 21 assemble assemble VBP cord-271701-tx0lqgff 250 22 into into IN cord-271701-tx0lqgff 250 23 hexadecamers hexadecamer NNS cord-271701-tx0lqgff 250 24 and and CC cord-271701-tx0lqgff 250 25 that that IN cord-271701-tx0lqgff 250 26 each each DT cord-271701-tx0lqgff 250 27 hexadecamer hexadecamer NN cord-271701-tx0lqgff 250 28 contributes contribute VBZ cord-271701-tx0lqgff 250 29 only only RB cord-271701-tx0lqgff 250 30 one one CD cord-271701-tx0lqgff 250 31 functional functional JJ cord-271701-tx0lqgff 250 32 active active JJ cord-271701-tx0lqgff 250 33 site site NN cord-271701-tx0lqgff 250 34 per per IN cord-271701-tx0lqgff 250 35 incorporation incorporation NN cord-271701-tx0lqgff 250 36 event event NN cord-271701-tx0lqgff 250 37 , , , cord-271701-tx0lqgff 250 38 the the DT cord-271701-tx0lqgff 250 39 difference difference NN cord-271701-tx0lqgff 250 40 would would MD cord-271701-tx0lqgff 250 41 be be VB cord-271701-tx0lqgff 250 42 much much RB cord-271701-tx0lqgff 250 43 smaller small JJR cord-271701-tx0lqgff 250 44 and and CC cord-271701-tx0lqgff 250 45 only only RB cord-271701-tx0lqgff 250 46 $ $ $ cord-271701-tx0lqgff 250 47 2.5-fold 2.5-fold CD cord-271701-tx0lqgff 250 48 . . . cord-271701-tx0lqgff 251 1 Presently presently RB cord-271701-tx0lqgff 251 2 , , , cord-271701-tx0lqgff 251 3 however however RB cord-271701-tx0lqgff 251 4 , , , cord-271701-tx0lqgff 251 5 we -PRON- PRP cord-271701-tx0lqgff 251 6 do do VBP cord-271701-tx0lqgff 251 7 not not RB cord-271701-tx0lqgff 251 8 yet yet RB cord-271701-tx0lqgff 251 9 have have VB cord-271701-tx0lqgff 251 10 an an DT cord-271701-tx0lqgff 251 11 estimate estimate NN cord-271701-tx0lqgff 251 12 for for IN cord-271701-tx0lqgff 251 13 the the DT cord-271701-tx0lqgff 251 14 efficiency efficiency NN cord-271701-tx0lqgff 251 15 and and CC cord-271701-tx0lqgff 251 16 stability stability NN cord-271701-tx0lqgff 251 17 of of IN cord-271701-tx0lqgff 251 18 the the DT cord-271701-tx0lqgff 251 19 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 251 20 + + SYM cord-271701-tx0lqgff 251 21 8 8 CD cord-271701-tx0lqgff 251 22 ) ) -RRB- cord-271701-tx0lqgff 251 23 complex complex NN cord-271701-tx0lqgff 251 24 , , , cord-271701-tx0lqgff 251 25 nor nor CC cord-271701-tx0lqgff 251 26 do do VBP cord-271701-tx0lqgff 251 27 we -PRON- PRP cord-271701-tx0lqgff 251 28 know know VB cord-271701-tx0lqgff 251 29 the the DT cord-271701-tx0lqgff 251 30 number number NN cord-271701-tx0lqgff 251 31 of of IN cord-271701-tx0lqgff 251 32 active active JJ cord-271701-tx0lqgff 251 33 sites site NNS cord-271701-tx0lqgff 251 34 in in IN cord-271701-tx0lqgff 251 35 the the DT cord-271701-tx0lqgff 251 36 complex complex NN cord-271701-tx0lqgff 251 37 that that WDT cord-271701-tx0lqgff 251 38 determine determine VBP cord-271701-tx0lqgff 251 39 its -PRON- PRP$ cord-271701-tx0lqgff 251 40 overall overall JJ cord-271701-tx0lqgff 251 41 activity activity NN cord-271701-tx0lqgff 251 42 . . . cord-271701-tx0lqgff 252 1 Mutagenesis Mutagenesis NNP cord-271701-tx0lqgff 252 2 of of IN cord-271701-tx0lqgff 252 3 nsp8 nsp8 NN cord-271701-tx0lqgff 252 4 was be VBD cord-271701-tx0lqgff 252 5 performed perform VBN cord-271701-tx0lqgff 252 6 to to TO cord-271701-tx0lqgff 252 7 identify identify VB cord-271701-tx0lqgff 252 8 residues residue NNS cord-271701-tx0lqgff 252 9 that that WDT cord-271701-tx0lqgff 252 10 may may MD cord-271701-tx0lqgff 252 11 contribute contribute VB cord-271701-tx0lqgff 252 12 to to IN cord-271701-tx0lqgff 252 13 the the DT cord-271701-tx0lqgff 252 14 catalytic catalytic JJ cord-271701-tx0lqgff 252 15 centre centre NN cord-271701-tx0lqgff 252 16 of of IN cord-271701-tx0lqgff 253 1 the the DT cord-271701-tx0lqgff 253 2 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 253 3 + + SYM cord-271701-tx0lqgff 253 4 8 8 CD cord-271701-tx0lqgff 253 5 ) ) -RRB- cord-271701-tx0lqgff 253 6 polymerase polymerase NN cord-271701-tx0lqgff 253 7 , , , cord-271701-tx0lqgff 253 8 while while IN cord-271701-tx0lqgff 253 9 differently differently RB cord-271701-tx0lqgff 253 10 tagged tagged NNP cord-271701-tx0lqgff 253 11 nsp8 nsp8 NNP cord-271701-tx0lqgff 253 12 recombinant recombinant JJ cord-271701-tx0lqgff 253 13 proteins protein NNS cord-271701-tx0lqgff 253 14 were be VBD cord-271701-tx0lqgff 253 15 constructed construct VBN cord-271701-tx0lqgff 253 16 to to TO cord-271701-tx0lqgff 253 17 explain explain VB cord-271701-tx0lqgff 253 18 some some DT cord-271701-tx0lqgff 253 19 striking striking JJ cord-271701-tx0lqgff 253 20 differences difference NNS cord-271701-tx0lqgff 253 21 with with IN cord-271701-tx0lqgff 253 22 previous previous JJ cord-271701-tx0lqgff 253 23 observations observation NNS cord-271701-tx0lqgff 253 24 . . . cord-271701-tx0lqgff 254 1 These these DT cord-271701-tx0lqgff 254 2 efforts effort NNS cord-271701-tx0lqgff 254 3 resulted result VBD cord-271701-tx0lqgff 254 4 in in IN cord-271701-tx0lqgff 254 5 two two CD cord-271701-tx0lqgff 254 6 intriguing intriguing JJ cord-271701-tx0lqgff 254 7 observations observation NNS cord-271701-tx0lqgff 254 8 . . . cord-271701-tx0lqgff 255 1 Firstly firstly RB cord-271701-tx0lqgff 255 2 , , , cord-271701-tx0lqgff 255 3 mutation mutation NN cord-271701-tx0lqgff 255 4 of of IN cord-271701-tx0lqgff 255 5 the the DT cord-271701-tx0lqgff 255 6 conserved conserved JJ cord-271701-tx0lqgff 255 7 N n CD cord-271701-tx0lqgff 255 8 - - HYPH cord-271701-tx0lqgff 255 9 terminal terminal NN cord-271701-tx0lqgff 255 10 D D NNP cord-271701-tx0lqgff 255 11 / / SYM cord-271701-tx0lqgff 255 12 ExD ExD NNP cord-271701-tx0lqgff 255 13 / / SYM cord-271701-tx0lqgff 255 14 E e NN cord-271701-tx0lqgff 255 15 motif motif NN cord-271701-tx0lqgff 255 16 , , , cord-271701-tx0lqgff 255 17 comprising comprise VBG cord-271701-tx0lqgff 255 18 D50 D50 NNP cord-271701-tx0lqgff 255 19 Table Table NNP cord-271701-tx0lqgff 255 20 1 1 CD cord-271701-tx0lqgff 255 21 ) ) -RRB- cord-271701-tx0lqgff 255 22 , , , cord-271701-tx0lqgff 255 23 using use VBG cord-271701-tx0lqgff 255 24 the the DT cord-271701-tx0lqgff 255 25 synthesis synthesis NN cord-271701-tx0lqgff 255 26 of of IN cord-271701-tx0lqgff 255 27 the the DT cord-271701-tx0lqgff 255 28 first first JJ cord-271701-tx0lqgff 255 29 dinucleotide dinucleotide NN cord-271701-tx0lqgff 255 30 pppGpA pppGpA NNP cord-271701-tx0lqgff 255 31 , , , cord-271701-tx0lqgff 255 32 as as IN cord-271701-tx0lqgff 255 33 previously previously RB cord-271701-tx0lqgff 255 34 described describe VBN cord-271701-tx0lqgff 255 35 by by IN cord-271701-tx0lqgff 255 36 Imbert Imbert NNP cord-271701-tx0lqgff 255 37 et et NNP cord-271701-tx0lqgff 255 38 al al NNP cord-271701-tx0lqgff 255 39 . . . cord-271701-tx0lqgff 256 1 ( ( -LRB- cord-271701-tx0lqgff 256 2 12 12 CD cord-271701-tx0lqgff 256 3 ) ) -RRB- cord-271701-tx0lqgff 256 4 , , , cord-271701-tx0lqgff 256 5 as as IN cord-271701-tx0lqgff 256 6 readout readout NN cord-271701-tx0lqgff 256 7 . . . cord-271701-tx0lqgff 257 1 Nsp8 nsp8 JJ cord-271701-tx0lqgff 257 2 template template NN cord-271701-tx0lqgff 257 3 binding bind VBG cord-271701-tx0lqgff 257 4 mutant mutant JJ cord-271701-tx0lqgff 257 5 K58A k58a NN cord-271701-tx0lqgff 257 6 was be VBD cord-271701-tx0lqgff 257 7 used use VBN cord-271701-tx0lqgff 257 8 as as IN cord-271701-tx0lqgff 257 9 negative negative JJ cord-271701-tx0lqgff 257 10 control control NN cord-271701-tx0lqgff 257 11 . . . cord-271701-tx0lqgff 258 1 The the DT cord-271701-tx0lqgff 258 2 AMP AMP NNP cord-271701-tx0lqgff 258 3 contaminant contaminant NN cord-271701-tx0lqgff 258 4 present present NN cord-271701-tx0lqgff 258 5 in in IN cord-271701-tx0lqgff 258 6 the the DT cord-271701-tx0lqgff 258 7 used use VBN cord-271701-tx0lqgff 258 8 [ [ -LRB- cord-271701-tx0lqgff 258 9 a-32 a-32 NNP cord-271701-tx0lqgff 258 10 P]ATP P]ATP NNP cord-271701-tx0lqgff 258 11 label label NN cord-271701-tx0lqgff 258 12 is be VBZ cord-271701-tx0lqgff 258 13 marked mark VBN cord-271701-tx0lqgff 258 14 as as IN cord-271701-tx0lqgff 258 15 loading load VBG cord-271701-tx0lqgff 258 16 control control NN cord-271701-tx0lqgff 258 17 and and CC cord-271701-tx0lqgff 258 18 size size NN cord-271701-tx0lqgff 258 19 reference reference NN cord-271701-tx0lqgff 258 20 . . . cord-271701-tx0lqgff 259 1 ( ( -LRB- cord-271701-tx0lqgff 259 2 D D NNP cord-271701-tx0lqgff 259 3 ) ) -RRB- cord-271701-tx0lqgff 259 4 Side side NN cord-271701-tx0lqgff 259 5 - - HYPH cord-271701-tx0lqgff 259 6 by by IN cord-271701-tx0lqgff 259 7 - - HYPH cord-271701-tx0lqgff 259 8 side side NN cord-271701-tx0lqgff 259 9 comparison comparison NN cord-271701-tx0lqgff 259 10 of of IN cord-271701-tx0lqgff 259 11 the the DT cord-271701-tx0lqgff 259 12 de de FW cord-271701-tx0lqgff 259 13 novo novo NNP cord-271701-tx0lqgff 259 14 initiation initiation NN cord-271701-tx0lqgff 259 15 activities activity NNS cord-271701-tx0lqgff 259 16 of of IN cord-271701-tx0lqgff 259 17 nps8 nps8 NN cord-271701-tx0lqgff 259 18 , , , cord-271701-tx0lqgff 259 19 His -PRON- PRP$ cord-271701-tx0lqgff 259 20 - - HYPH cord-271701-tx0lqgff 259 21 nsp8 nsp8 NN cord-271701-tx0lqgff 259 22 and and CC cord-271701-tx0lqgff 259 23 nsp7 nsp7 NN cord-271701-tx0lqgff 259 24 - - HYPH cord-271701-tx0lqgff 259 25 8-His 8-his NN cord-271701-tx0lqgff 259 26 . . . cord-271701-tx0lqgff 260 1 ( ( -LRB- cord-271701-tx0lqgff 260 2 E E NNP cord-271701-tx0lqgff 260 3 ) ) -RRB- cord-271701-tx0lqgff 260 4 Elution Elution NNP cord-271701-tx0lqgff 260 5 profile profile NN cord-271701-tx0lqgff 260 6 of of IN cord-271701-tx0lqgff 260 7 the the DT cord-271701-tx0lqgff 260 8 nsp7 nsp7 JJ cord-271701-tx0lqgff 260 9 - - HYPH cord-271701-tx0lqgff 260 10 8-His 8-his JJ cord-271701-tx0lqgff 260 11 fusion fusion NN cord-271701-tx0lqgff 260 12 protein protein NN cord-271701-tx0lqgff 260 13 relative relative JJ cord-271701-tx0lqgff 260 14 to to IN cord-271701-tx0lqgff 260 15 nsp8-His nsp8-His NNP cord-271701-tx0lqgff 260 16 . . . cord-271701-tx0lqgff 261 1 ( ( -LRB- cord-271701-tx0lqgff 261 2 F F NNP cord-271701-tx0lqgff 261 3 ) ) -RRB- cord-271701-tx0lqgff 261 4 Primer primer NN cord-271701-tx0lqgff 261 5 - - HYPH cord-271701-tx0lqgff 261 6 extension extension NN cord-271701-tx0lqgff 261 7 activities activity NNS cord-271701-tx0lqgff 261 8 of of IN cord-271701-tx0lqgff 261 9 putative putative JJ cord-271701-tx0lqgff 261 10 cleavage cleavage NN cord-271701-tx0lqgff 261 11 intermediate intermediate JJ cord-271701-tx0lqgff 261 12 nsp7 nsp7 NNP cord-271701-tx0lqgff 261 13 - - HYPH cord-271701-tx0lqgff 261 14 8 8 CD cord-271701-tx0lqgff 261 15 on on IN cord-271701-tx0lqgff 261 16 the the DT cord-271701-tx0lqgff 261 17 U U NNP cord-271701-tx0lqgff 261 18 20 20 CD cord-271701-tx0lqgff 261 19 template template NN cord-271701-tx0lqgff 261 20 ( ( -LRB- cord-271701-tx0lqgff 261 21 see see VB cord-271701-tx0lqgff 261 22 Figure Figure NNP cord-271701-tx0lqgff 261 23 4 4 CD cord-271701-tx0lqgff 261 24 and and CC cord-271701-tx0lqgff 261 25 Table Table NNP cord-271701-tx0lqgff 261 26 1 1 CD cord-271701-tx0lqgff 261 27 ) ) -RRB- cord-271701-tx0lqgff 261 28 . . . cord-271701-tx0lqgff 262 1 and and CC cord-271701-tx0lqgff 262 2 D52 D52 NNP cord-271701-tx0lqgff 262 3 in in IN cord-271701-tx0lqgff 262 4 SARS SARS NNP cord-271701-tx0lqgff 262 5 - - HYPH cord-271701-tx0lqgff 262 6 CoV CoV NNP cord-271701-tx0lqgff 262 7 , , , cord-271701-tx0lqgff 262 8 abolished abolish VBD cord-271701-tx0lqgff 262 9 RdRp RdRp NNP cord-271701-tx0lqgff 262 10 activity activity NN cord-271701-tx0lqgff 262 11 , , , cord-271701-tx0lqgff 262 12 whereas whereas IN cord-271701-tx0lqgff 262 13 mutation mutation NN cord-271701-tx0lqgff 262 14 of of IN cord-271701-tx0lqgff 262 15 the the DT cord-271701-tx0lqgff 262 16 C C NNP cord-271701-tx0lqgff 262 17 - - HYPH cord-271701-tx0lqgff 262 18 terminal terminal NN cord-271701-tx0lqgff 262 19 motif motif NN cord-271701-tx0lqgff 262 20 , , , cord-271701-tx0lqgff 262 21 including include VBG cord-271701-tx0lqgff 262 22 SARS SARS NNP cord-271701-tx0lqgff 262 23 - - HYPH cord-271701-tx0lqgff 262 24 CoV cov NN cord-271701-tx0lqgff 262 25 residues residue NNS cord-271701-tx0lqgff 262 26 D161 D161 NNP cord-271701-tx0lqgff 262 27 and and CC cord-271701-tx0lqgff 262 28 D163 D163 NNP cord-271701-tx0lqgff 262 29 , , , cord-271701-tx0lqgff 262 30 did do VBD cord-271701-tx0lqgff 262 31 not not RB cord-271701-tx0lqgff 262 32 affect affect VB cord-271701-tx0lqgff 262 33 polymerase polymerase NN cord-271701-tx0lqgff 262 34 activity activity NN cord-271701-tx0lqgff 262 35 ( ( -LRB- cord-271701-tx0lqgff 262 36 Figure figure NN cord-271701-tx0lqgff 262 37 5 5 CD cord-271701-tx0lqgff 262 38 ) ) -RRB- cord-271701-tx0lqgff 262 39 . . . cord-271701-tx0lqgff 263 1 Given give VBN cord-271701-tx0lqgff 263 2 the the DT cord-271701-tx0lqgff 263 3 general general JJ cord-271701-tx0lqgff 263 4 importance importance NN cord-271701-tx0lqgff 263 5 of of IN cord-271701-tx0lqgff 263 6 acidic acidic JJ cord-271701-tx0lqgff 263 7 residues residue NNS cord-271701-tx0lqgff 263 8 for for IN cord-271701-tx0lqgff 263 9 metal metal NN cord-271701-tx0lqgff 263 10 - - HYPH cord-271701-tx0lqgff 263 11 ion ion NN cord-271701-tx0lqgff 263 12 coordination coordination NN cord-271701-tx0lqgff 263 13 in in IN cord-271701-tx0lqgff 263 14 polymerase polymerase NN cord-271701-tx0lqgff 263 15 active active JJ cord-271701-tx0lqgff 263 16 sites site NNS cord-271701-tx0lqgff 263 17 ( ( -LRB- cord-271701-tx0lqgff 263 18 3 3 CD cord-271701-tx0lqgff 263 19 ) ) -RRB- cord-271701-tx0lqgff 263 20 ( ( -LRB- cord-271701-tx0lqgff 263 21 4 4 LS cord-271701-tx0lqgff 263 22 ) ) -RRB- cord-271701-tx0lqgff 263 23 ( ( -LRB- cord-271701-tx0lqgff 263 24 5 5 LS cord-271701-tx0lqgff 263 25 ) ) -RRB- cord-271701-tx0lqgff 263 26 22 22 CD cord-271701-tx0lqgff 263 27 ) ) -RRB- cord-271701-tx0lqgff 263 28 and and CC cord-271701-tx0lqgff 263 29 the the DT cord-271701-tx0lqgff 263 30 D D NNP cord-271701-tx0lqgff 263 31 / / SYM cord-271701-tx0lqgff 263 32 ExD ExD NNP cord-271701-tx0lqgff 263 33 / / SYM cord-271701-tx0lqgff 263 34 E e NN cord-271701-tx0lqgff 263 35 consensus consensus NN cord-271701-tx0lqgff 263 36 sequence sequence NN cord-271701-tx0lqgff 263 37 in in IN cord-271701-tx0lqgff 263 38 coronaviruses coronaviruse NNS cord-271701-tx0lqgff 263 39 at at IN cord-271701-tx0lqgff 263 40 positions position NNS cord-271701-tx0lqgff 263 41 50 50 CD cord-271701-tx0lqgff 263 42 - - SYM cord-271701-tx0lqgff 263 43 52 52 CD cord-271701-tx0lqgff 263 44 , , , cord-271701-tx0lqgff 263 45 we -PRON- PRP cord-271701-tx0lqgff 263 46 now now RB cord-271701-tx0lqgff 263 47 postulate postulate VBP cord-271701-tx0lqgff 263 48 that that IN cord-271701-tx0lqgff 263 49 these these DT cord-271701-tx0lqgff 263 50 residues residue NNS cord-271701-tx0lqgff 263 51 are be VBP cord-271701-tx0lqgff 263 52 part part NN cord-271701-tx0lqgff 263 53 of of IN cord-271701-tx0lqgff 263 54 the the DT cord-271701-tx0lqgff 263 55 Mg Mg NNP cord-271701-tx0lqgff 263 56 2 2 CD cord-271701-tx0lqgff 263 57 + + SYM cord-271701-tx0lqgff 263 58 -binding -binde VBG cord-271701-tx0lqgff 263 59 active active JJ cord-271701-tx0lqgff 263 60 site site NN cord-271701-tx0lqgff 263 61 in in IN cord-271701-tx0lqgff 263 62 spite spite NN cord-271701-tx0lqgff 263 63 of of IN cord-271701-tx0lqgff 263 64 the the DT cord-271701-tx0lqgff 263 65 more more RBR cord-271701-tx0lqgff 263 66 conserved conserved JJ cord-271701-tx0lqgff 263 67 nature nature NN cord-271701-tx0lqgff 263 68 of of IN cord-271701-tx0lqgff 263 69 D161 d161 NN cord-271701-tx0lqgff 263 70 and and CC cord-271701-tx0lqgff 263 71 D163 d163 NN cord-271701-tx0lqgff 263 72 ( ( -LRB- cord-271701-tx0lqgff 263 73 Figure figure NN cord-271701-tx0lqgff 263 74 5 5 CD cord-271701-tx0lqgff 263 75 ) ) -RRB- cord-271701-tx0lqgff 263 76 , , , cord-271701-tx0lqgff 263 77 and and CC cord-271701-tx0lqgff 263 78 their -PRON- PRP$ cord-271701-tx0lqgff 263 79 position position NN cord-271701-tx0lqgff 263 80 in in IN cord-271701-tx0lqgff 263 81 the the DT cord-271701-tx0lqgff 263 82 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 263 83 + + SYM cord-271701-tx0lqgff 263 84 8 8 CD cord-271701-tx0lqgff 263 85 ) ) -RRB- cord-271701-tx0lqgff 263 86 structure structure NN cord-271701-tx0lqgff 263 87 ( ( -LRB- cord-271701-tx0lqgff 263 88 see see VB cord-271701-tx0lqgff 263 89 below below RB cord-271701-tx0lqgff 263 90 for for IN cord-271701-tx0lqgff 263 91 further further JJ cord-271701-tx0lqgff 263 92 discussion discussion NN cord-271701-tx0lqgff 263 93 ) ) -RRB- cord-271701-tx0lqgff 263 94 . . . cord-271701-tx0lqgff 264 1 Secondly secondly RB cord-271701-tx0lqgff 264 2 , , , cord-271701-tx0lqgff 264 3 the the DT cord-271701-tx0lqgff 264 4 presence presence NN cord-271701-tx0lqgff 264 5 of of IN cord-271701-tx0lqgff 264 6 N n CD cord-271701-tx0lqgff 264 7 - - HYPH cord-271701-tx0lqgff 264 8 terminal terminal NN cord-271701-tx0lqgff 264 9 extensions extension NNS cord-271701-tx0lqgff 264 10 other other JJ cord-271701-tx0lqgff 264 11 than than IN cord-271701-tx0lqgff 264 12 nsp7 nsp7 NNP cord-271701-tx0lqgff 264 13 , , , cord-271701-tx0lqgff 264 14 such such JJ cord-271701-tx0lqgff 264 15 as as IN cord-271701-tx0lqgff 264 16 ubiquitin ubiquitin NN cord-271701-tx0lqgff 264 17 and and CC cord-271701-tx0lqgff 264 18 His -PRON- PRP$ cord-271701-tx0lqgff 264 19 6 6 CD cord-271701-tx0lqgff 264 20 , , , cord-271701-tx0lqgff 264 21 severely severely RB cord-271701-tx0lqgff 264 22 affected affect VBD cord-271701-tx0lqgff 264 23 the the DT cord-271701-tx0lqgff 264 24 primer primer NN cord-271701-tx0lqgff 264 25 extension extension NN cord-271701-tx0lqgff 264 26 activity activity NN cord-271701-tx0lqgff 264 27 of of IN cord-271701-tx0lqgff 264 28 nsp8 nsp8 NN cord-271701-tx0lqgff 264 29 ( ( -LRB- cord-271701-tx0lqgff 264 30 Figure Figure NNP cord-271701-tx0lqgff 264 31 7 7 CD cord-271701-tx0lqgff 264 32 ) ) -RRB- cord-271701-tx0lqgff 264 33 , , , cord-271701-tx0lqgff 264 34 potentially potentially RB cord-271701-tx0lqgff 264 35 by by IN cord-271701-tx0lqgff 264 36 changing change VBG cord-271701-tx0lqgff 264 37 its -PRON- PRP$ cord-271701-tx0lqgff 264 38 oligomeric oligomeric JJ cord-271701-tx0lqgff 264 39 state state NN cord-271701-tx0lqgff 264 40 ( ( -LRB- cord-271701-tx0lqgff 264 41 Figure figure NN cord-271701-tx0lqgff 264 42 2 2 CD cord-271701-tx0lqgff 264 43 ) ) -RRB- cord-271701-tx0lqgff 264 44 . . . cord-271701-tx0lqgff 265 1 However however RB cord-271701-tx0lqgff 265 2 , , , cord-271701-tx0lqgff 265 3 the the DT cord-271701-tx0lqgff 265 4 relatively relatively RB cord-271701-tx0lqgff 265 5 strong strong JJ cord-271701-tx0lqgff 265 6 activity activity NN cord-271701-tx0lqgff 265 7 of of IN cord-271701-tx0lqgff 265 8 nsp7 nsp7 JJ cord-271701-tx0lqgff 265 9 - - HYPH cord-271701-tx0lqgff 265 10 8 8 CD cord-271701-tx0lqgff 265 11 ( ( -LRB- cord-271701-tx0lqgff 265 12 Figure Figure NNP cord-271701-tx0lqgff 265 13 7 7 CD cord-271701-tx0lqgff 265 14 ) ) -RRB- cord-271701-tx0lqgff 265 15 , , , cord-271701-tx0lqgff 265 16 a a DT cord-271701-tx0lqgff 265 17 potential potential NN cord-271701-tx0lqgff 265 18 naturally naturally RB cord-271701-tx0lqgff 265 19 occurring occur VBG cord-271701-tx0lqgff 265 20 replicase replicase NN cord-271701-tx0lqgff 265 21 processing processing NN cord-271701-tx0lqgff 265 22 intermediate intermediate JJ cord-271701-tx0lqgff 265 23 , , , cord-271701-tx0lqgff 265 24 implies imply VBZ cord-271701-tx0lqgff 265 25 that that IN cord-271701-tx0lqgff 265 26 nsp8 nsp8 NN cord-271701-tx0lqgff 265 27 's 's POS cord-271701-tx0lqgff 265 28 activity activity NN cord-271701-tx0lqgff 265 29 is be VBZ cord-271701-tx0lqgff 265 30 unlikely unlikely JJ cord-271701-tx0lqgff 265 31 to to TO cord-271701-tx0lqgff 265 32 be be VB cord-271701-tx0lqgff 265 33 directly directly RB cord-271701-tx0lqgff 265 34 controlled control VBN cord-271701-tx0lqgff 265 35 by by IN cord-271701-tx0lqgff 265 36 an an DT cord-271701-tx0lqgff 265 37 N n CD cord-271701-tx0lqgff 265 38 - - HYPH cord-271701-tx0lqgff 265 39 terminal terminal NN cord-271701-tx0lqgff 265 40 cleavage cleavage NN cord-271701-tx0lqgff 265 41 event event NN cord-271701-tx0lqgff 265 42 , , , cord-271701-tx0lqgff 265 43 as as IN cord-271701-tx0lqgff 265 44 was be VBD cord-271701-tx0lqgff 265 45 observed observe VBN cord-271701-tx0lqgff 265 46 for for IN cord-271701-tx0lqgff 265 47 , , , cord-271701-tx0lqgff 265 48 e.g. e.g. RB cord-271701-tx0lqgff 265 49 the the DT cord-271701-tx0lqgff 265 50 poliovirus poliovirus NN cord-271701-tx0lqgff 265 51 polymerase polymerase NN cord-271701-tx0lqgff 265 52 ( ( -LRB- cord-271701-tx0lqgff 265 53 29 29 CD cord-271701-tx0lqgff 265 54 ) ) -RRB- cord-271701-tx0lqgff 265 55 . . . cord-271701-tx0lqgff 266 1 In in IN cord-271701-tx0lqgff 266 2 addition addition NN cord-271701-tx0lqgff 266 3 , , , cord-271701-tx0lqgff 266 4 these these DT cord-271701-tx0lqgff 266 5 observations observation NNS cord-271701-tx0lqgff 266 6 suggest suggest VBP cord-271701-tx0lqgff 266 7 that that IN cord-271701-tx0lqgff 266 8 a a DT cord-271701-tx0lqgff 266 9 more more RBR cord-271701-tx0lqgff 266 10 diverse diverse JJ cord-271701-tx0lqgff 266 11 array array NN cord-271701-tx0lqgff 266 12 of of IN cord-271701-tx0lqgff 266 13 nsp8-containing nsp8-containing NNP cord-271701-tx0lqgff 266 14 RdRps RdRps NNP cord-271701-tx0lqgff 266 15 may may MD cord-271701-tx0lqgff 266 16 be be VB cord-271701-tx0lqgff 266 17 involved involve VBN cord-271701-tx0lqgff 266 18 in in IN cord-271701-tx0lqgff 266 19 CoV cov NN cord-271701-tx0lqgff 266 20 replication replication NN cord-271701-tx0lqgff 266 21 and and CC cord-271701-tx0lqgff 266 22 transcription transcription NN cord-271701-tx0lqgff 266 23 . . . cord-271701-tx0lqgff 267 1 Comparing compare VBG cord-271701-tx0lqgff 267 2 our -PRON- PRP$ cord-271701-tx0lqgff 267 3 data datum NNS cord-271701-tx0lqgff 267 4 against against IN cord-271701-tx0lqgff 267 5 the the DT cord-271701-tx0lqgff 267 6 background background NN cord-271701-tx0lqgff 267 7 of of IN cord-271701-tx0lqgff 267 8 the the DT cord-271701-tx0lqgff 267 9 previously previously RB cord-271701-tx0lqgff 267 10 published publish VBN cord-271701-tx0lqgff 267 11 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 267 12 + + SYM cord-271701-tx0lqgff 267 13 8 8 CD cord-271701-tx0lqgff 267 14 ) ) -RRB- cord-271701-tx0lqgff 267 15 structure structure NN cord-271701-tx0lqgff 267 16 ( ( -LRB- cord-271701-tx0lqgff 267 17 13 13 CD cord-271701-tx0lqgff 267 18 ) ) -RRB- cord-271701-tx0lqgff 267 19 , , , cord-271701-tx0lqgff 267 20 we -PRON- PRP cord-271701-tx0lqgff 267 21 made make VBD cord-271701-tx0lqgff 267 22 four four CD cord-271701-tx0lqgff 267 23 main main JJ cord-271701-tx0lqgff 267 24 observations observation NNS cord-271701-tx0lqgff 267 25 . . . cord-271701-tx0lqgff 268 1 Firstly firstly RB cord-271701-tx0lqgff 268 2 , , , cord-271701-tx0lqgff 268 3 we -PRON- PRP cord-271701-tx0lqgff 268 4 note note VBP cord-271701-tx0lqgff 268 5 that that IN cord-271701-tx0lqgff 268 6 in in IN cord-271701-tx0lqgff 268 7 the the DT cord-271701-tx0lqgff 268 8 published published JJ cord-271701-tx0lqgff 268 9 nsp(7 nsp(7 CD cord-271701-tx0lqgff 268 10 + + SYM cord-271701-tx0lqgff 268 11 8 8 CD cord-271701-tx0lqgff 268 12 ) ) -RRB- cord-271701-tx0lqgff 268 13 crystal crystal NN cord-271701-tx0lqgff 268 14 structure structure NN cord-271701-tx0lqgff 268 15 four four CD cord-271701-tx0lqgff 268 16 of of IN cord-271701-tx0lqgff 268 17 the the DT cord-271701-tx0lqgff 268 18 eight eight CD cord-271701-tx0lqgff 268 19 N n CD cord-271701-tx0lqgff 268 20 - - HYPH cord-271701-tx0lqgff 268 21 terminal terminal NN cord-271701-tx0lqgff 268 22 D D NNP cord-271701-tx0lqgff 268 23 / / SYM cord-271701-tx0lqgff 268 24 ExD ExD NNP cord-271701-tx0lqgff 268 25 / / SYM cord-271701-tx0lqgff 268 26 E e NN cord-271701-tx0lqgff 268 27 motifs motif NNS cord-271701-tx0lqgff 268 28 in in IN cord-271701-tx0lqgff 268 29 the the DT cord-271701-tx0lqgff 268 30 complex complex NN cord-271701-tx0lqgff 268 31 reside reside VBP cord-271701-tx0lqgff 268 32 at at IN cord-271701-tx0lqgff 268 33 the the DT cord-271701-tx0lqgff 268 34 border border NN cord-271701-tx0lqgff 268 35 of of IN cord-271701-tx0lqgff 268 36 partially partially RB cord-271701-tx0lqgff 268 37 unresolved unresolved JJ cord-271701-tx0lqgff 268 38 N n CD cord-271701-tx0lqgff 268 39 - - HYPH cord-271701-tx0lqgff 268 40 terminal terminal NN cord-271701-tx0lqgff 268 41 nsp8 nsp8 JJ cord-271701-tx0lqgff 268 42 domains domain NNS cord-271701-tx0lqgff 268 43 , , , cord-271701-tx0lqgff 268 44 where where WRB cord-271701-tx0lqgff 268 45 the the DT cord-271701-tx0lqgff 268 46 coordinates coordinate NNS cord-271701-tx0lqgff 268 47 of of IN cord-271701-tx0lqgff 268 48 up up IN cord-271701-tx0lqgff 268 49 to to TO cord-271701-tx0lqgff 268 50 49 49 CD cord-271701-tx0lqgff 268 51 nsp8 nsp8 JJ cord-271701-tx0lqgff 268 52 residues residue NNS cord-271701-tx0lqgff 268 53 and and CC cord-271701-tx0lqgff 268 54 5 5 CD cord-271701-tx0lqgff 268 55 exogenous exogenous JJ cord-271701-tx0lqgff 268 56 amino amino NN cord-271701-tx0lqgff 268 57 acids acid NNS cord-271701-tx0lqgff 268 58 derived derive VBN cord-271701-tx0lqgff 268 59 from from IN cord-271701-tx0lqgff 268 60 the the DT cord-271701-tx0lqgff 268 61 removed remove VBN cord-271701-tx0lqgff 268 62 GST gst NN cord-271701-tx0lqgff 268 63 fusion fusion NN cord-271701-tx0lqgff 268 64 partner partner NN cord-271701-tx0lqgff 268 65 were be VBD cord-271701-tx0lqgff 268 66 not not RB cord-271701-tx0lqgff 268 67 determined determine VBN cord-271701-tx0lqgff 268 68 . . . cord-271701-tx0lqgff 269 1 In in IN cord-271701-tx0lqgff 269 2 light light NN cord-271701-tx0lqgff 269 3 of of IN cord-271701-tx0lqgff 269 4 our -PRON- PRP$ cord-271701-tx0lqgff 269 5 own own JJ cord-271701-tx0lqgff 269 6 finding finding NN cord-271701-tx0lqgff 269 7 that that IN cord-271701-tx0lqgff 269 8 unnatural unnatural JJ cord-271701-tx0lqgff 269 9 N n CD cord-271701-tx0lqgff 269 10 - - HYPH cord-271701-tx0lqgff 269 11 terminal terminal NN cord-271701-tx0lqgff 269 12 extensions extension NNS cord-271701-tx0lqgff 269 13 severely severely RB cord-271701-tx0lqgff 269 14 impair impair VBP cord-271701-tx0lqgff 269 15 nsp8 nsp8 NN cord-271701-tx0lqgff 269 16 's 's POS cord-271701-tx0lqgff 269 17 RdRp rdrp NN cord-271701-tx0lqgff 269 18 activity activity NN cord-271701-tx0lqgff 269 19 ( ( -LRB- cord-271701-tx0lqgff 269 20 Figure figure NN cord-271701-tx0lqgff 269 21 5 5 CD cord-271701-tx0lqgff 269 22 ) ) -RRB- cord-271701-tx0lqgff 269 23 , , , cord-271701-tx0lqgff 269 24 this this DT cord-271701-tx0lqgff 269 25 suggests suggest VBZ cord-271701-tx0lqgff 269 26 that that IN cord-271701-tx0lqgff 269 27 the the DT cord-271701-tx0lqgff 269 28 published publish VBN cord-271701-tx0lqgff 269 29 crystal crystal NN cord-271701-tx0lqgff 269 30 structure structure NN cord-271701-tx0lqgff 269 31 may may MD cord-271701-tx0lqgff 269 32 not not RB cord-271701-tx0lqgff 269 33 represent represent VB cord-271701-tx0lqgff 269 34 an an DT cord-271701-tx0lqgff 269 35 active active JJ cord-271701-tx0lqgff 269 36 conformation conformation NN cord-271701-tx0lqgff 269 37 of of IN cord-271701-tx0lqgff 269 38 the the DT cord-271701-tx0lqgff 269 39 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 269 40 + + SYM cord-271701-tx0lqgff 269 41 8 8 CD cord-271701-tx0lqgff 269 42 ) ) -RRB- cord-271701-tx0lqgff 269 43 polymerase polymerase NN cord-271701-tx0lqgff 269 44 . . . cord-271701-tx0lqgff 270 1 Secondly secondly RB cord-271701-tx0lqgff 270 2 , , , cord-271701-tx0lqgff 270 3 we -PRON- PRP cord-271701-tx0lqgff 270 4 observe observe VBP cord-271701-tx0lqgff 270 5 that that IN cord-271701-tx0lqgff 270 6 residues residue VBZ cord-271701-tx0lqgff 270 7 D50 D50 NNP cord-271701-tx0lqgff 270 8 and and CC cord-271701-tx0lqgff 270 9 D52 D52 NNP cord-271701-tx0lqgff 270 10 , , , cord-271701-tx0lqgff 270 11 which which WDT cord-271701-tx0lqgff 270 12 are be VBP cord-271701-tx0lqgff 270 13 both both DT cord-271701-tx0lqgff 270 14 crucial crucial JJ cord-271701-tx0lqgff 270 15 for for IN cord-271701-tx0lqgff 270 16 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 270 17 + + SYM cord-271701-tx0lqgff 270 18 8 8 CD cord-271701-tx0lqgff 270 19 ) ) -RRB- cord-271701-tx0lqgff 270 20 activity activity NN cord-271701-tx0lqgff 270 21 , , , cord-271701-tx0lqgff 270 22 are be VBP cord-271701-tx0lqgff 270 23 residing reside VBG cord-271701-tx0lqgff 270 24 in in IN cord-271701-tx0lqgff 270 25 an an DT cord-271701-tx0lqgff 270 26 a a DT cord-271701-tx0lqgff 270 27 - - HYPH cord-271701-tx0lqgff 270 28 helix helix NN cord-271701-tx0lqgff 270 29 in in IN cord-271701-tx0lqgff 270 30 the the DT cord-271701-tx0lqgff 270 31 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 270 32 + + SYM cord-271701-tx0lqgff 270 33 8 8 CD cord-271701-tx0lqgff 270 34 ) ) -RRB- cord-271701-tx0lqgff 270 35 structure structure NN cord-271701-tx0lqgff 270 36 ( ( -LRB- cord-271701-tx0lqgff 270 37 Supplementary Supplementary NNP cord-271701-tx0lqgff 270 38 Figure Figure NNP cord-271701-tx0lqgff 270 39 _SP cord-271701-tx0lqgff 270 40 S5 S5 NNP cord-271701-tx0lqgff 270 41 ) ) -RRB- cord-271701-tx0lqgff 270 42 , , , cord-271701-tx0lqgff 270 43 whereas whereas IN cord-271701-tx0lqgff 270 44 in in IN cord-271701-tx0lqgff 270 45 canonical canonical JJ cord-271701-tx0lqgff 270 46 primases primase NNS cord-271701-tx0lqgff 270 47 and and CC cord-271701-tx0lqgff 270 48 polymerases polymerase NNS cord-271701-tx0lqgff 270 49 , , , cord-271701-tx0lqgff 270 50 the the DT cord-271701-tx0lqgff 270 51 catalytic catalytic JJ cord-271701-tx0lqgff 270 52 centre centre NN cord-271701-tx0lqgff 270 53 is be VBZ cord-271701-tx0lqgff 270 54 preferentially preferentially RB cord-271701-tx0lqgff 270 55 located locate VBN cord-271701-tx0lqgff 270 56 on on IN cord-271701-tx0lqgff 270 57 b b NN cord-271701-tx0lqgff 270 58 - - HYPH cord-271701-tx0lqgff 270 59 strands strand NNS cord-271701-tx0lqgff 270 60 or or CC cord-271701-tx0lqgff 270 61 turns turn NNS cord-271701-tx0lqgff 270 62 ( ( -LRB- cord-271701-tx0lqgff 270 63 12 12 CD cord-271701-tx0lqgff 270 64 , , , cord-271701-tx0lqgff 270 65 22 22 CD cord-271701-tx0lqgff 270 66 ) ) -RRB- cord-271701-tx0lqgff 270 67 . . . cord-271701-tx0lqgff 271 1 Thirdly thirdly RB cord-271701-tx0lqgff 271 2 , , , cord-271701-tx0lqgff 271 3 we -PRON- PRP cord-271701-tx0lqgff 271 4 note note VBP cord-271701-tx0lqgff 271 5 that that IN cord-271701-tx0lqgff 271 6 Mg Mg NNP cord-271701-tx0lqgff 271 7 2 2 CD cord-271701-tx0lqgff 271 8 + + SYM cord-271701-tx0lqgff 271 9 was be VBD cord-271701-tx0lqgff 271 10 lacking lack VBG cord-271701-tx0lqgff 271 11 from from IN cord-271701-tx0lqgff 271 12 the the DT cord-271701-tx0lqgff 271 13 published publish VBN cord-271701-tx0lqgff 271 14 nsp(7 nsp(7 CD cord-271701-tx0lqgff 271 15 + + SYM cord-271701-tx0lqgff 271 16 8 8 CD cord-271701-tx0lqgff 271 17 ) ) -RRB- cord-271701-tx0lqgff 271 18 crystal crystal NN cord-271701-tx0lqgff 271 19 structure structure NN cord-271701-tx0lqgff 271 20 ( ( -LRB- cord-271701-tx0lqgff 271 21 13 13 CD cord-271701-tx0lqgff 271 22 ) ) -RRB- cord-271701-tx0lqgff 271 23 , , , cord-271701-tx0lqgff 271 24 even even RB cord-271701-tx0lqgff 271 25 though though IN cord-271701-tx0lqgff 271 26 it -PRON- PRP cord-271701-tx0lqgff 271 27 is be VBZ cord-271701-tx0lqgff 271 28 required require VBN cord-271701-tx0lqgff 271 29 for for IN cord-271701-tx0lqgff 271 30 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 271 31 + + SYM cord-271701-tx0lqgff 271 32 8 8 CD cord-271701-tx0lqgff 271 33 ) ) -RRB- cord-271701-tx0lqgff 271 34 activity activity NN cord-271701-tx0lqgff 271 35 . . . cord-271701-tx0lqgff 272 1 Fourthly fourthly RB cord-271701-tx0lqgff 272 2 and and CC cord-271701-tx0lqgff 272 3 last last JJ cord-271701-tx0lqgff 272 4 , , , cord-271701-tx0lqgff 272 5 we -PRON- PRP cord-271701-tx0lqgff 272 6 observe observe VBP cord-271701-tx0lqgff 272 7 that that IN cord-271701-tx0lqgff 272 8 a a DT cord-271701-tx0lqgff 272 9 1:1 1:1 CD cord-271701-tx0lqgff 272 10 ratio ratio NN cord-271701-tx0lqgff 272 11 of of IN cord-271701-tx0lqgff 272 12 nsp7 nsp7 NN cord-271701-tx0lqgff 272 13 : : : cord-271701-tx0lqgff 272 14 nsp8 nsp8 NN cord-271701-tx0lqgff 272 15 is be VBZ cord-271701-tx0lqgff 272 16 sufficient sufficient JJ cord-271701-tx0lqgff 272 17 to to TO cord-271701-tx0lqgff 272 18 capture capture VB cord-271701-tx0lqgff 272 19 all all DT cord-271701-tx0lqgff 272 20 nsp8 nsp8 NN cord-271701-tx0lqgff 272 21 in in IN cord-271701-tx0lqgff 272 22 a a DT cord-271701-tx0lqgff 272 23 higher high JJR cord-271701-tx0lqgff 272 24 molecular molecular JJ cord-271701-tx0lqgff 272 25 weight weight NN cord-271701-tx0lqgff 272 26 complex complex NN cord-271701-tx0lqgff 272 27 ( ( -LRB- cord-271701-tx0lqgff 272 28 Figure figure NN cord-271701-tx0lqgff 272 29 2F 2f NN cord-271701-tx0lqgff 272 30 ) ) -RRB- cord-271701-tx0lqgff 272 31 whereas whereas IN cord-271701-tx0lqgff 272 32 previously previously RB cord-271701-tx0lqgff 272 33 a a DT cord-271701-tx0lqgff 272 34 2:1 2:1 CD cord-271701-tx0lqgff 272 35 ratio ratio NN cord-271701-tx0lqgff 272 36 was be VBD cord-271701-tx0lqgff 272 37 required require VBN cord-271701-tx0lqgff 272 38 ( ( -LRB- cord-271701-tx0lqgff 272 39 13 13 CD cord-271701-tx0lqgff 272 40 ) ) -RRB- cord-271701-tx0lqgff 272 41 , , , cord-271701-tx0lqgff 272 42 potentially potentially RB cord-271701-tx0lqgff 272 43 due due JJ cord-271701-tx0lqgff 272 44 to to IN cord-271701-tx0lqgff 272 45 the the DT cord-271701-tx0lqgff 272 46 additional additional JJ cord-271701-tx0lqgff 272 47 N n CD cord-271701-tx0lqgff 272 48 - - HYPH cord-271701-tx0lqgff 272 49 terminal terminal NN cord-271701-tx0lqgff 272 50 residues residue NNS cord-271701-tx0lqgff 272 51 that that WDT cord-271701-tx0lqgff 272 52 altered alter VBD cord-271701-tx0lqgff 272 53 the the DT cord-271701-tx0lqgff 272 54 dynamics dynamic NNS cord-271701-tx0lqgff 272 55 of of IN cord-271701-tx0lqgff 272 56 complex complex JJ cord-271701-tx0lqgff 272 57 formation formation NN cord-271701-tx0lqgff 272 58 . . . cord-271701-tx0lqgff 273 1 The the DT cord-271701-tx0lqgff 273 2 ( ( -LRB- cord-271701-tx0lqgff 273 3 functional functional JJ cord-271701-tx0lqgff 273 4 ) ) -RRB- cord-271701-tx0lqgff 273 5 implications implication NNS cord-271701-tx0lqgff 273 6 of of IN cord-271701-tx0lqgff 273 7 these these DT cord-271701-tx0lqgff 273 8 observations observation NNS cord-271701-tx0lqgff 273 9 are be VBP cord-271701-tx0lqgff 273 10 not not RB cord-271701-tx0lqgff 273 11 clear clear JJ cord-271701-tx0lqgff 273 12 at at IN cord-271701-tx0lqgff 273 13 present present JJ cord-271701-tx0lqgff 273 14 , , , cord-271701-tx0lqgff 273 15 but but CC cord-271701-tx0lqgff 273 16 additional additional JJ cord-271701-tx0lqgff 273 17 structural structural JJ cord-271701-tx0lqgff 273 18 studies study NNS cord-271701-tx0lqgff 273 19 will will MD cord-271701-tx0lqgff 273 20 likely likely RB cord-271701-tx0lqgff 273 21 be be VB cord-271701-tx0lqgff 273 22 required require VBN cord-271701-tx0lqgff 273 23 to to TO cord-271701-tx0lqgff 273 24 address address VB cord-271701-tx0lqgff 273 25 these these DT cord-271701-tx0lqgff 273 26 issues issue NNS cord-271701-tx0lqgff 273 27 in in IN cord-271701-tx0lqgff 273 28 detail detail NN cord-271701-tx0lqgff 273 29 , , , cord-271701-tx0lqgff 273 30 and and CC cord-271701-tx0lqgff 273 31 gain gain VB cord-271701-tx0lqgff 273 32 insights insight NNS cord-271701-tx0lqgff 273 33 that that WDT cord-271701-tx0lqgff 273 34 may may MD cord-271701-tx0lqgff 273 35 aid aid VB cord-271701-tx0lqgff 273 36 in in IN cord-271701-tx0lqgff 273 37 explaining explain VBG cord-271701-tx0lqgff 273 38 the the DT cord-271701-tx0lqgff 273 39 in in FW cord-271701-tx0lqgff 273 40 vitro vitro FW cord-271701-tx0lqgff 273 41 results result NNS cord-271701-tx0lqgff 273 42 presented present VBN cord-271701-tx0lqgff 273 43 here here RB cord-271701-tx0lqgff 273 44 . . . cord-271701-tx0lqgff 274 1 Likely likely RB cord-271701-tx0lqgff 274 2 , , , cord-271701-tx0lqgff 274 3 such such JJ cord-271701-tx0lqgff 274 4 experiments experiment NNS cord-271701-tx0lqgff 274 5 will will MD cord-271701-tx0lqgff 274 6 also also RB cord-271701-tx0lqgff 274 7 offer offer VB cord-271701-tx0lqgff 274 8 further further JJ cord-271701-tx0lqgff 274 9 information information NN cord-271701-tx0lqgff 274 10 regarding regard VBG cord-271701-tx0lqgff 274 11 the the DT cord-271701-tx0lqgff 274 12 residues residue NNS cord-271701-tx0lqgff 274 13 that that WDT cord-271701-tx0lqgff 274 14 are be VBP cord-271701-tx0lqgff 274 15 involved involve VBN cord-271701-tx0lqgff 274 16 in in IN cord-271701-tx0lqgff 274 17 nucleotide nucleotide JJ cord-271701-tx0lqgff 274 18 positioning positioning NN cord-271701-tx0lqgff 274 19 , , , cord-271701-tx0lqgff 274 20 Mg Mg NNP cord-271701-tx0lqgff 274 21 2 2 CD cord-271701-tx0lqgff 274 22 + + CC cord-271701-tx0lqgff 274 23 coordination coordination NN cord-271701-tx0lqgff 274 24 and and CC cord-271701-tx0lqgff 274 25 RdRp RdRp NNP cord-271701-tx0lqgff 274 26 chemistry chemistry NN cord-271701-tx0lqgff 274 27 . . . cord-271701-tx0lqgff 275 1 In in IN cord-271701-tx0lqgff 275 2 summary summary NN cord-271701-tx0lqgff 275 3 , , , cord-271701-tx0lqgff 275 4 our -PRON- PRP$ cord-271701-tx0lqgff 275 5 results result NNS cord-271701-tx0lqgff 275 6 provide provide VBP cord-271701-tx0lqgff 275 7 important important JJ cord-271701-tx0lqgff 275 8 novel novel JJ cord-271701-tx0lqgff 275 9 insights insight NNS cord-271701-tx0lqgff 275 10 into into IN cord-271701-tx0lqgff 275 11 the the DT cord-271701-tx0lqgff 275 12 functionality functionality NN cord-271701-tx0lqgff 275 13 of of IN cord-271701-tx0lqgff 275 14 the the DT cord-271701-tx0lqgff 275 15 SARS SARS NNP cord-271701-tx0lqgff 275 16 - - HYPH cord-271701-tx0lqgff 275 17 CoV CoV NNP cord-271701-tx0lqgff 275 18 hexadecameric hexadecameric NNP cord-271701-tx0lqgff 275 19 nsp(7 nsp(7 NNP cord-271701-tx0lqgff 275 20 + + SYM cord-271701-tx0lqgff 275 21 8 8 CD cord-271701-tx0lqgff 275 22 ) ) -RRB- cord-271701-tx0lqgff 275 23 complex complex JJ cord-271701-tx0lqgff 275 24 and and CC cord-271701-tx0lqgff 275 25 demonstrate demonstrate VB cord-271701-tx0lqgff 275 26 its -PRON- PRP$ cord-271701-tx0lqgff 275 27 activity activity NN cord-271701-tx0lqgff 275 28 as as IN cord-271701-tx0lqgff 275 29 an an DT cord-271701-tx0lqgff 275 30 RNA RNA NNP cord-271701-tx0lqgff 275 31 polymerase polymerase NN cord-271701-tx0lqgff 275 32 . . . cord-271701-tx0lqgff 276 1 In in IN cord-271701-tx0lqgff 276 2 addition addition NN cord-271701-tx0lqgff 276 3 , , , cord-271701-tx0lqgff 276 4 our -PRON- PRP$ cord-271701-tx0lqgff 276 5 experiments experiment NNS cord-271701-tx0lqgff 276 6 and and CC cord-271701-tx0lqgff 276 7 controls control NNS cord-271701-tx0lqgff 276 8 revealed reveal VBD cord-271701-tx0lqgff 276 9 and and CC cord-271701-tx0lqgff 276 10 address address VB cord-271701-tx0lqgff 276 11 a a DT cord-271701-tx0lqgff 276 12 number number NN cord-271701-tx0lqgff 276 13 of of IN cord-271701-tx0lqgff 276 14 disparities disparity NNS cord-271701-tx0lqgff 276 15 between between IN cord-271701-tx0lqgff 276 16 previous previous JJ cord-271701-tx0lqgff 276 17 claims claim NNS cord-271701-tx0lqgff 276 18 and and CC cord-271701-tx0lqgff 276 19 hypotheses hypothesis NNS cord-271701-tx0lqgff 276 20 ( ( -LRB- cord-271701-tx0lqgff 276 21 12 12 CD cord-271701-tx0lqgff 276 22 ) ) -RRB- cord-271701-tx0lqgff 276 23 , , , cord-271701-tx0lqgff 276 24 and and CC cord-271701-tx0lqgff 276 25 our -PRON- PRP$ cord-271701-tx0lqgff 276 26 own own JJ cord-271701-tx0lqgff 276 27 observations observation NNS cord-271701-tx0lqgff 276 28 . . . cord-271701-tx0lqgff 277 1 The the DT cord-271701-tx0lqgff 277 2 ' ' `` cord-271701-tx0lqgff 277 3 primase primase NN cord-271701-tx0lqgff 277 4 hypothesis hypothesis NN cord-271701-tx0lqgff 277 5 ' ' '' cord-271701-tx0lqgff 277 6 previously previously RB cord-271701-tx0lqgff 277 7 formulated formulate VBN cord-271701-tx0lqgff 277 8 by by IN cord-271701-tx0lqgff 277 9 Imbert Imbert NNP cord-271701-tx0lqgff 277 10 and and CC cord-271701-tx0lqgff 277 11 co co NNS cord-271701-tx0lqgff 277 12 - - NNS cord-271701-tx0lqgff 277 13 workers worker NNS cord-271701-tx0lqgff 277 14 ( ( -LRB- cord-271701-tx0lqgff 277 15 12 12 CD cord-271701-tx0lqgff 277 16 ) ) -RRB- cord-271701-tx0lqgff 277 17 remains remain VBZ cord-271701-tx0lqgff 277 18 an an DT cord-271701-tx0lqgff 277 19 intriguing intriguing JJ cord-271701-tx0lqgff 277 20 model model NN cord-271701-tx0lqgff 277 21 to to TO cord-271701-tx0lqgff 277 22 explain explain VB cord-271701-tx0lqgff 277 23 the the DT cord-271701-tx0lqgff 277 24 initiation initiation NN cord-271701-tx0lqgff 277 25 of of IN cord-271701-tx0lqgff 277 26 SARS SARS NNP cord-271701-tx0lqgff 277 27 - - HYPH cord-271701-tx0lqgff 277 28 CoV CoV NNP cord-271701-tx0lqgff 277 29 RNA RNA NNP cord-271701-tx0lqgff 277 30 synthesis synthesis NN cord-271701-tx0lqgff 277 31 and and CC cord-271701-tx0lqgff 277 32 is be VBZ cord-271701-tx0lqgff 277 33 a a DT cord-271701-tx0lqgff 277 34 topic topic NN cord-271701-tx0lqgff 277 35 that that WDT cord-271701-tx0lqgff 277 36 will will MD cord-271701-tx0lqgff 277 37 be be VB cord-271701-tx0lqgff 277 38 addressed address VBN cord-271701-tx0lqgff 277 39 in in IN cord-271701-tx0lqgff 277 40 detail detail NN cord-271701-tx0lqgff 277 41 elsewhere elsewhere RB cord-271701-tx0lqgff 277 42 . . . cord-271701-tx0lqgff 278 1 Nevertheless nevertheless RB cord-271701-tx0lqgff 278 2 , , , cord-271701-tx0lqgff 278 3 based base VBN cord-271701-tx0lqgff 278 4 on on IN cord-271701-tx0lqgff 278 5 the the DT cord-271701-tx0lqgff 278 6 primer primer NN cord-271701-tx0lqgff 278 7 extension extension NN cord-271701-tx0lqgff 278 8 activity activity NN cord-271701-tx0lqgff 278 9 of of IN cord-271701-tx0lqgff 278 10 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 278 11 + + SYM cord-271701-tx0lqgff 278 12 8 8 CD cord-271701-tx0lqgff 278 13 ) ) -RRB- cord-271701-tx0lqgff 278 14 on on IN cord-271701-tx0lqgff 278 15 non non JJ cord-271701-tx0lqgff 278 16 - - JJ cord-271701-tx0lqgff 278 17 structured structured JJ cord-271701-tx0lqgff 278 18 RNA RNA NNP cord-271701-tx0lqgff 278 19 templates template NNS cord-271701-tx0lqgff 278 20 , , , cord-271701-tx0lqgff 278 21 we -PRON- PRP cord-271701-tx0lqgff 278 22 can can MD cord-271701-tx0lqgff 278 23 no no RB cord-271701-tx0lqgff 278 24 longer longer RB cord-271701-tx0lqgff 278 25 exclude exclude VB cord-271701-tx0lqgff 278 26 the the DT cord-271701-tx0lqgff 278 27 possibility possibility NN cord-271701-tx0lqgff 278 28 that that IN cord-271701-tx0lqgff 278 29 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 278 30 + + SYM cord-271701-tx0lqgff 278 31 8 8 CD cord-271701-tx0lqgff 278 32 ) ) -RRB- cord-271701-tx0lqgff 278 33 may may MD cord-271701-tx0lqgff 278 34 synthesise synthesise VB cord-271701-tx0lqgff 278 35 substantially substantially RB cord-271701-tx0lqgff 278 36 longer long JJR cord-271701-tx0lqgff 278 37 products product NNS cord-271701-tx0lqgff 278 38 than than IN cord-271701-tx0lqgff 278 39 mere mere JJ cord-271701-tx0lqgff 278 40 oligonucleotide oligonucleotide JJ cord-271701-tx0lqgff 278 41 primers primer NNS cord-271701-tx0lqgff 278 42 in in IN cord-271701-tx0lqgff 278 43 vivo vivo NN cord-271701-tx0lqgff 278 44 , , , cord-271701-tx0lqgff 278 45 possibly possibly RB cord-271701-tx0lqgff 278 46 stimulated stimulate VBN cord-271701-tx0lqgff 278 47 by by IN cord-271701-tx0lqgff 278 48 the the DT cord-271701-tx0lqgff 278 49 presence presence NN cord-271701-tx0lqgff 278 50 of of IN cord-271701-tx0lqgff 278 51 additional additional JJ cord-271701-tx0lqgff 278 52 viral viral JJ cord-271701-tx0lqgff 278 53 protein protein NN cord-271701-tx0lqgff 278 54 factors factor NNS cord-271701-tx0lqgff 278 55 that that WDT cord-271701-tx0lqgff 278 56 could could MD cord-271701-tx0lqgff 278 57 e.g. e.g. RB cord-271701-tx0lqgff 278 58 provide provide VB cord-271701-tx0lqgff 278 59 RNA RNA NNP cord-271701-tx0lqgff 278 60 - - HYPH cord-271701-tx0lqgff 278 61 unwinding unwind VBG cord-271701-tx0lqgff 278 62 activity activity NN cord-271701-tx0lqgff 278 63 . . . cord-271701-tx0lqgff 279 1 Consequently consequently RB cord-271701-tx0lqgff 279 2 , , , cord-271701-tx0lqgff 279 3 it -PRON- PRP cord-271701-tx0lqgff 279 4 is be VBZ cord-271701-tx0lqgff 279 5 now now RB cord-271701-tx0lqgff 279 6 a a DT cord-271701-tx0lqgff 279 7 distinct distinct JJ cord-271701-tx0lqgff 279 8 possibility possibility NN cord-271701-tx0lqgff 279 9 that that IN cord-271701-tx0lqgff 279 10 CoV CoV NNP cord-271701-tx0lqgff 279 11 RNA RNA NNP cord-271701-tx0lqgff 279 12 synthesis synthesis NN cord-271701-tx0lqgff 279 13 involves involve VBZ cord-271701-tx0lqgff 279 14 structurally structurally RB cord-271701-tx0lqgff 279 15 different different JJ cord-271701-tx0lqgff 279 16 and and CC cord-271701-tx0lqgff 279 17 functionally functionally RB cord-271701-tx0lqgff 279 18 separable separable JJ cord-271701-tx0lqgff 279 19 RNA RNA NNP cord-271701-tx0lqgff 279 20 synthesising synthesise VBG cord-271701-tx0lqgff 279 21 complexes complex NNS cord-271701-tx0lqgff 279 22 [ [ -LRB- cord-271701-tx0lqgff 279 23 e.g. e.g. RB cord-271701-tx0lqgff 279 24 containing contain VBG cord-271701-tx0lqgff 279 25 nsp12 nsp12 CD cord-271701-tx0lqgff 279 26 or or CC cord-271701-tx0lqgff 279 27 nsp(7 nsp(7 NNS cord-271701-tx0lqgff 279 28 + + SYM cord-271701-tx0lqgff 279 29 8 8 CD cord-271701-tx0lqgff 279 30 ) ) -RRB- cord-271701-tx0lqgff 279 31 ] ] -RRB- cord-271701-tx0lqgff 279 32 , , , cord-271701-tx0lqgff 279 33 each each DT cord-271701-tx0lqgff 279 34 possessing possess VBG cord-271701-tx0lqgff 279 35 their -PRON- PRP$ cord-271701-tx0lqgff 279 36 own own JJ cord-271701-tx0lqgff 279 37 dedicated dedicated JJ cord-271701-tx0lqgff 279 38 RdRp RdRp NNP cord-271701-tx0lqgff 279 39 characteristics characteristic NNS cord-271701-tx0lqgff 279 40 and and CC cord-271701-tx0lqgff 279 41 function function VB cord-271701-tx0lqgff 279 42 in in IN cord-271701-tx0lqgff 279 43 viral viral JJ cord-271701-tx0lqgff 279 44 plus plus NN cord-271701-tx0lqgff 279 45 or or CC cord-271701-tx0lqgff 279 46 minus minus CC cord-271701-tx0lqgff 279 47 strand strand NN cord-271701-tx0lqgff 279 48 RNA RNA NNP cord-271701-tx0lqgff 279 49 synthesis synthesis NN cord-271701-tx0lqgff 279 50 . . . cord-271701-tx0lqgff 280 1 It -PRON- PRP cord-271701-tx0lqgff 280 2 will will MD cord-271701-tx0lqgff 280 3 therefore therefore RB cord-271701-tx0lqgff 280 4 be be VB cord-271701-tx0lqgff 280 5 crucial crucial JJ cord-271701-tx0lqgff 280 6 to to TO cord-271701-tx0lqgff 280 7 study study VB cord-271701-tx0lqgff 280 8 whether whether IN cord-271701-tx0lqgff 280 9 these these DT cord-271701-tx0lqgff 280 10 different different JJ cord-271701-tx0lqgff 280 11 polymerase polymerase NN cord-271701-tx0lqgff 280 12 activities activity NNS cord-271701-tx0lqgff 280 13 are be VBP cord-271701-tx0lqgff 280 14 part part NN cord-271701-tx0lqgff 280 15 of of IN cord-271701-tx0lqgff 280 16 the the DT cord-271701-tx0lqgff 280 17 same same JJ cord-271701-tx0lqgff 280 18 enzyme enzyme NN cord-271701-tx0lqgff 280 19 complex complex NN cord-271701-tx0lqgff 281 1 and and CC cord-271701-tx0lqgff 281 2 , , , cord-271701-tx0lqgff 281 3 if if IN cord-271701-tx0lqgff 281 4 so so RB cord-271701-tx0lqgff 281 5 , , , cord-271701-tx0lqgff 281 6 whether whether IN cord-271701-tx0lqgff 281 7 they -PRON- PRP cord-271701-tx0lqgff 281 8 can can MD cord-271701-tx0lqgff 281 9 influence influence VB cord-271701-tx0lqgff 281 10 each each DT cord-271701-tx0lqgff 281 11 other other JJ cord-271701-tx0lqgff 281 12 's 's POS cord-271701-tx0lqgff 281 13 activity activity NN cord-271701-tx0lqgff 281 14 or or CC cord-271701-tx0lqgff 281 15 are be VBP cord-271701-tx0lqgff 281 16 subject subject JJ cord-271701-tx0lqgff 281 17 to to IN cord-271701-tx0lqgff 281 18 additional additional JJ cord-271701-tx0lqgff 281 19 control control NN cord-271701-tx0lqgff 281 20 mechanisms mechanism NNS cord-271701-tx0lqgff 281 21 . . . cord-271701-tx0lqgff 282 1 Host host NN cord-271701-tx0lqgff 282 2 factors factor NNS cord-271701-tx0lqgff 282 3 in in IN cord-271701-tx0lqgff 282 4 positive positive JJ cord-271701-tx0lqgff 282 5 - - HYPH cord-271701-tx0lqgff 282 6 strand strand NN cord-271701-tx0lqgff 282 7 RNA RNA NNP cord-271701-tx0lqgff 282 8 virus virus NN cord-271701-tx0lqgff 282 9 genome genome NN cord-271701-tx0lqgff 282 10 replication replication NN cord-271701-tx0lqgff 282 11 Synthesis Synthesis NNP cord-271701-tx0lqgff 282 12 of of IN cord-271701-tx0lqgff 282 13 subgenomic subgenomic NNP cord-271701-tx0lqgff 282 14 RNAs rna NNS cord-271701-tx0lqgff 282 15 by by IN cord-271701-tx0lqgff 282 16 positive positive JJ cord-271701-tx0lqgff 282 17 - - HYPH cord-271701-tx0lqgff 282 18 strand strand NN cord-271701-tx0lqgff 282 19 RNA RNA NNP cord-271701-tx0lqgff 282 20 viruses virus NNS cord-271701-tx0lqgff 283 1 Two two CD cord-271701-tx0lqgff 283 2 proton proton NN cord-271701-tx0lqgff 283 3 transfers transfer NNS cord-271701-tx0lqgff 283 4 in in IN cord-271701-tx0lqgff 283 5 the the DT cord-271701-tx0lqgff 283 6 transition transition NN cord-271701-tx0lqgff 283 7 state state NN cord-271701-tx0lqgff 283 8 for for IN cord-271701-tx0lqgff 283 9 nucleotidyl nucleotidyl NNP cord-271701-tx0lqgff 283 10 transfer transfer NN cord-271701-tx0lqgff 283 11 catalyzed catalyze VBN cord-271701-tx0lqgff 283 12 by by IN cord-271701-tx0lqgff 283 13 RNA RNA NNP cord-271701-tx0lqgff 283 14 - - : cord-271701-tx0lqgff 283 15 and and CC cord-271701-tx0lqgff 283 16 DNA dna NN cord-271701-tx0lqgff 283 17 - - HYPH cord-271701-tx0lqgff 283 18 dependent dependent JJ cord-271701-tx0lqgff 283 19 RNA RNA NNP cord-271701-tx0lqgff 283 20 and and CC cord-271701-tx0lqgff 283 21 DNA DNA NNP cord-271701-tx0lqgff 283 22 polymerases polymerase NNS cord-271701-tx0lqgff 283 23 Mutation Mutation NNP cord-271701-tx0lqgff 283 24 of of IN cord-271701-tx0lqgff 283 25 the the DT cord-271701-tx0lqgff 283 26 aspartic aspartic JJ cord-271701-tx0lqgff 283 27 acid acid NN cord-271701-tx0lqgff 283 28 residues residue NNS cord-271701-tx0lqgff 283 29 of of IN cord-271701-tx0lqgff 283 30 the the DT cord-271701-tx0lqgff 283 31 GDD GDD NNP cord-271701-tx0lqgff 283 32 sequence sequence NN cord-271701-tx0lqgff 283 33 motif motif NN cord-271701-tx0lqgff 283 34 of of IN cord-271701-tx0lqgff 283 35 poliovirus poliovirus NN cord-271701-tx0lqgff 283 36 RNA rna NN cord-271701-tx0lqgff 283 37 - - HYPH cord-271701-tx0lqgff 283 38 dependent dependent JJ cord-271701-tx0lqgff 283 39 RNA RNA NNP cord-271701-tx0lqgff 283 40 polymerase polymerase NN cord-271701-tx0lqgff 283 41 results result NNS cord-271701-tx0lqgff 283 42 in in IN cord-271701-tx0lqgff 283 43 enzymes enzyme NNS cord-271701-tx0lqgff 283 44 with with IN cord-271701-tx0lqgff 283 45 altered altered JJ cord-271701-tx0lqgff 283 46 metal metal NN cord-271701-tx0lqgff 283 47 ion ion NN cord-271701-tx0lqgff 283 48 requirements requirement NNS cord-271701-tx0lqgff 283 49 for for IN cord-271701-tx0lqgff 283 50 activity activity NN cord-271701-tx0lqgff 283 51 Molecular molecular JJ cord-271701-tx0lqgff 283 52 model model NN cord-271701-tx0lqgff 283 53 of of IN cord-271701-tx0lqgff 283 54 SARS SARS NNP cord-271701-tx0lqgff 283 55 coronavirus coronavirus NN cord-271701-tx0lqgff 283 56 polymerase polymerase NN cord-271701-tx0lqgff 283 57 : : : cord-271701-tx0lqgff 283 58 implications implication NNS cord-271701-tx0lqgff 283 59 for for IN cord-271701-tx0lqgff 283 60 biochemical biochemical JJ cord-271701-tx0lqgff 283 61 functions function NNS cord-271701-tx0lqgff 283 62 and and CC cord-271701-tx0lqgff 283 63 drug drug NN cord-271701-tx0lqgff 283 64 design design NN cord-271701-tx0lqgff 284 1 Coronaviruses Coronaviruses NNP cord-271701-tx0lqgff 284 2 post post NN cord-271701-tx0lqgff 284 3 - - JJ cord-271701-tx0lqgff 284 4 SARS SARS NNP cord-271701-tx0lqgff 285 1 : : : cord-271701-tx0lqgff 285 2 update update VB cord-271701-tx0lqgff 285 3 on on IN cord-271701-tx0lqgff 285 4 replication replication NN cord-271701-tx0lqgff 285 5 and and CC cord-271701-tx0lqgff 285 6 pathogenesis pathogenesis NN cord-271701-tx0lqgff 285 7 Coronaviruses coronaviruse NNS cord-271701-tx0lqgff 285 8 : : : cord-271701-tx0lqgff 286 1 Molecular molecular JJ cord-271701-tx0lqgff 286 2 Biology biology NN cord-271701-tx0lqgff 286 3 and and CC cord-271701-tx0lqgff 286 4 Diseases disease NNS cord-271701-tx0lqgff 287 1 Unique unique JJ cord-271701-tx0lqgff 287 2 and and CC cord-271701-tx0lqgff 287 3 conserved conserve VBN cord-271701-tx0lqgff 287 4 features feature NNS cord-271701-tx0lqgff 287 5 of of IN cord-271701-tx0lqgff 287 6 genome genome NN cord-271701-tx0lqgff 287 7 and and CC cord-271701-tx0lqgff 287 8 proteome proteome NN cord-271701-tx0lqgff 287 9 of of IN cord-271701-tx0lqgff 287 10 SARS SARS NNP cord-271701-tx0lqgff 287 11 - - HYPH cord-271701-tx0lqgff 287 12 coronavirus coronavirus NN cord-271701-tx0lqgff 287 13 , , , cord-271701-tx0lqgff 287 14 an an DT cord-271701-tx0lqgff 287 15 early early JJ cord-271701-tx0lqgff 287 16 split split NN cord-271701-tx0lqgff 287 17 - - HYPH cord-271701-tx0lqgff 287 18 off off NN cord-271701-tx0lqgff 287 19 from from IN cord-271701-tx0lqgff 287 20 the the DT cord-271701-tx0lqgff 287 21 coronavirus coronavirus NN cord-271701-tx0lqgff 287 22 group group NN cord-271701-tx0lqgff 287 23 2 2 CD cord-271701-tx0lqgff 287 24 lineage lineage NN cord-271701-tx0lqgff 287 25 The the DT cord-271701-tx0lqgff 287 26 RNA RNA NNP cord-271701-tx0lqgff 287 27 polymerase polymerase NN cord-271701-tx0lqgff 287 28 activity activity NN cord-271701-tx0lqgff 287 29 of of IN cord-271701-tx0lqgff 288 1 SARS SARS NNP cord-271701-tx0lqgff 288 2 - - HYPH cord-271701-tx0lqgff 288 3 coronavirus coronavirus NN cord-271701-tx0lqgff 288 4 nsp12 nsp12 CD cord-271701-tx0lqgff 288 5 is be VBZ cord-271701-tx0lqgff 288 6 primer primer JJ cord-271701-tx0lqgff 288 7 dependent dependent JJ cord-271701-tx0lqgff 288 8 Zn2 zn2 NN cord-271701-tx0lqgff 288 9 + + -LRB- cord-271701-tx0lqgff 288 10 inhibits inhibit VBZ cord-271701-tx0lqgff 288 11 coronavirus coronavirus NN cord-271701-tx0lqgff 288 12 and and CC cord-271701-tx0lqgff 288 13 arterivirus arterivirus NNP cord-271701-tx0lqgff 288 14 RNA RNA NNP cord-271701-tx0lqgff 288 15 polymerase polymerase NN cord-271701-tx0lqgff 288 16 activity activity NN cord-271701-tx0lqgff 288 17 in in IN cord-271701-tx0lqgff 288 18 vitro vitro FW cord-271701-tx0lqgff 288 19 and and CC cord-271701-tx0lqgff 288 20 zinc zinc NN cord-271701-tx0lqgff 288 21 ionophores ionophores NNP cord-271701-tx0lqgff 288 22 block block VBP cord-271701-tx0lqgff 288 23 the the DT cord-271701-tx0lqgff 288 24 replication replication NN cord-271701-tx0lqgff 288 25 of of IN cord-271701-tx0lqgff 288 26 these these DT cord-271701-tx0lqgff 288 27 viruses virus NNS cord-271701-tx0lqgff 288 28 in in IN cord-271701-tx0lqgff 288 29 cell cell NN cord-271701-tx0lqgff 288 30 culture culture NN cord-271701-tx0lqgff 289 1 A a DT cord-271701-tx0lqgff 289 2 second second JJ cord-271701-tx0lqgff 289 3 , , , cord-271701-tx0lqgff 289 4 non non JJ cord-271701-tx0lqgff 289 5 - - JJ cord-271701-tx0lqgff 289 6 canonical canonical JJ cord-271701-tx0lqgff 289 7 RNA rna NN cord-271701-tx0lqgff 289 8 - - HYPH cord-271701-tx0lqgff 289 9 dependent dependent JJ cord-271701-tx0lqgff 289 10 RNA RNA NNP cord-271701-tx0lqgff 289 11 polymerase polymerase NN cord-271701-tx0lqgff 289 12 in in IN cord-271701-tx0lqgff 289 13 SARS SARS NNP cord-271701-tx0lqgff 289 14 Coronavirus Coronavirus NNP cord-271701-tx0lqgff 289 15 Insights Insights NNPS cord-271701-tx0lqgff 289 16 into into IN cord-271701-tx0lqgff 289 17 SARS SARS NNP cord-271701-tx0lqgff 289 18 - - HYPH cord-271701-tx0lqgff 289 19 CoV CoV NNP cord-271701-tx0lqgff 289 20 transcription transcription NN cord-271701-tx0lqgff 289 21 and and CC cord-271701-tx0lqgff 289 22 replication replication NN cord-271701-tx0lqgff 289 23 from from IN cord-271701-tx0lqgff 289 24 the the DT cord-271701-tx0lqgff 289 25 structure structure NN cord-271701-tx0lqgff 289 26 of of IN cord-271701-tx0lqgff 289 27 the the DT cord-271701-tx0lqgff 289 28 nsp7-nsp8 nsp7-nsp8 NNP cord-271701-tx0lqgff 289 29 hexadecamer hexadecamer NN cord-271701-tx0lqgff 289 30 Production Production NNP cord-271701-tx0lqgff 289 31 of of IN cord-271701-tx0lqgff 289 32 ' ' `` cord-271701-tx0lqgff 289 33 ' ' `` cord-271701-tx0lqgff 289 34 authentic authentic JJ cord-271701-tx0lqgff 289 35 ' ' '' cord-271701-tx0lqgff 289 36 ' ' '' cord-271701-tx0lqgff 289 37 poliovirus poliovirus NN cord-271701-tx0lqgff 289 38 RNA rna NN cord-271701-tx0lqgff 289 39 - - HYPH cord-271701-tx0lqgff 289 40 dependent dependent JJ cord-271701-tx0lqgff 289 41 RNA RNA NNP cord-271701-tx0lqgff 289 42 polymerase polymerase NN cord-271701-tx0lqgff 289 43 ( ( -LRB- cord-271701-tx0lqgff 289 44 3D(pol 3d(pol NN cord-271701-tx0lqgff 289 45 ) ) -RRB- cord-271701-tx0lqgff 289 46 ) ) -RRB- cord-271701-tx0lqgff 289 47 by by IN cord-271701-tx0lqgff 289 48 ubiquitin ubiquitin NN cord-271701-tx0lqgff 289 49 - - HYPH cord-271701-tx0lqgff 289 50 protease protease NN cord-271701-tx0lqgff 289 51 - - HYPH cord-271701-tx0lqgff 289 52 mediated mediate VBN cord-271701-tx0lqgff 289 53 cleavage cleavage NN cord-271701-tx0lqgff 289 54 in in IN cord-271701-tx0lqgff 289 55 Escherichia Escherichia NNP cord-271701-tx0lqgff 289 56 coli coli NNS cord-271701-tx0lqgff 290 1 A a DT cord-271701-tx0lqgff 290 2 new new JJ cord-271701-tx0lqgff 290 3 lead lead NN cord-271701-tx0lqgff 290 4 for for IN cord-271701-tx0lqgff 290 5 nonpeptidic nonpeptidic NN cord-271701-tx0lqgff 290 6 active active JJ cord-271701-tx0lqgff 290 7 - - HYPH cord-271701-tx0lqgff 290 8 site site NN cord-271701-tx0lqgff 290 9 - - HYPH cord-271701-tx0lqgff 290 10 directed direct VBN cord-271701-tx0lqgff 290 11 inhibitors inhibitor NNS cord-271701-tx0lqgff 290 12 of of IN cord-271701-tx0lqgff 290 13 the the DT cord-271701-tx0lqgff 290 14 severe severe JJ cord-271701-tx0lqgff 290 15 acute acute JJ cord-271701-tx0lqgff 290 16 respiratory respiratory JJ cord-271701-tx0lqgff 290 17 syndrome syndrome NN cord-271701-tx0lqgff 290 18 coronavirus coronavirus NN cord-271701-tx0lqgff 290 19 main main JJ cord-271701-tx0lqgff 290 20 protease protease NN cord-271701-tx0lqgff 290 21 discovered discover VBN cord-271701-tx0lqgff 290 22 by by IN cord-271701-tx0lqgff 290 23 a a DT cord-271701-tx0lqgff 290 24 combination combination NN cord-271701-tx0lqgff 290 25 of of IN cord-271701-tx0lqgff 290 26 screening screening NN cord-271701-tx0lqgff 290 27 and and CC cord-271701-tx0lqgff 290 28 docking docking NN cord-271701-tx0lqgff 290 29 methods method NNS cord-271701-tx0lqgff 290 30 MUSCLE muscle NN cord-271701-tx0lqgff 290 31 : : : cord-271701-tx0lqgff 291 1 multiple multiple JJ cord-271701-tx0lqgff 291 2 sequence sequence NN cord-271701-tx0lqgff 291 3 alignment alignment NN cord-271701-tx0lqgff 291 4 with with IN cord-271701-tx0lqgff 291 5 high high JJ cord-271701-tx0lqgff 291 6 accuracy accuracy NN cord-271701-tx0lqgff 291 7 and and CC cord-271701-tx0lqgff 291 8 high high JJ cord-271701-tx0lqgff 291 9 throughput throughput NN cord-271701-tx0lqgff 291 10 Genome genome NN cord-271701-tx0lqgff 291 11 - - HYPH cord-271701-tx0lqgff 291 12 wide wide JJ cord-271701-tx0lqgff 291 13 analysis analysis NN cord-271701-tx0lqgff 291 14 of of IN cord-271701-tx0lqgff 291 15 protein protein NN cord-271701-tx0lqgff 291 16 - - HYPH cord-271701-tx0lqgff 291 17 protein protein NN cord-271701-tx0lqgff 291 18 interactions interaction NNS cord-271701-tx0lqgff 291 19 and and CC cord-271701-tx0lqgff 291 20 involvement involvement NN cord-271701-tx0lqgff 291 21 of of IN cord-271701-tx0lqgff 291 22 viral viral JJ cord-271701-tx0lqgff 291 23 proteins protein NNS cord-271701-tx0lqgff 291 24 in in IN cord-271701-tx0lqgff 291 25 SARS SARS NNP cord-271701-tx0lqgff 291 26 - - HYPH cord-271701-tx0lqgff 291 27 CoV CoV NNP cord-271701-tx0lqgff 291 28 replication replication NN cord-271701-tx0lqgff 291 29 Structural structural JJ cord-271701-tx0lqgff 291 30 basis basis NN cord-271701-tx0lqgff 291 31 for for IN cord-271701-tx0lqgff 291 32 proteolysis proteolysis NN cord-271701-tx0lqgff 291 33 - - HYPH cord-271701-tx0lqgff 291 34 dependent dependent JJ cord-271701-tx0lqgff 291 35 activation activation NN cord-271701-tx0lqgff 291 36 of of IN cord-271701-tx0lqgff 291 37 the the DT cord-271701-tx0lqgff 291 38 poliovirus poliovirus NN cord-271701-tx0lqgff 291 39 RNA rna NN cord-271701-tx0lqgff 291 40 - - HYPH cord-271701-tx0lqgff 291 41 dependent dependent JJ cord-271701-tx0lqgff 291 42 RNA RNA NNP cord-271701-tx0lqgff 291 43 polymerase polymerase NN cord-271701-tx0lqgff 291 44 Virus virus NN cord-271701-tx0lqgff 291 45 - - HYPH cord-271701-tx0lqgff 291 46 encoded encode VBN cord-271701-tx0lqgff 291 47 proteinases proteinase NNS cord-271701-tx0lqgff 291 48 and and CC cord-271701-tx0lqgff 291 49 proteolytic proteolytic JJ cord-271701-tx0lqgff 291 50 processing processing NN cord-271701-tx0lqgff 291 51 in in IN cord-271701-tx0lqgff 291 52 the the DT cord-271701-tx0lqgff 291 53 Nidovirales Nidovirales NNP cord-271701-tx0lqgff 291 54 Poliovirus Poliovirus NNP cord-271701-tx0lqgff 291 55 RNA RNA NNP cord-271701-tx0lqgff 291 56 - - HYPH cord-271701-tx0lqgff 291 57 dependent dependent JJ cord-271701-tx0lqgff 291 58 RNA RNA NNP cord-271701-tx0lqgff 291 59 Polymerase Polymerase NNP cord-271701-tx0lqgff 291 60 ( ( -LRB- cord-271701-tx0lqgff 291 61 3Dpol 3Dpol NNP cord-271701-tx0lqgff 291 62 ) ) -RRB- cord-271701-tx0lqgff 291 63 is be VBZ cord-271701-tx0lqgff 291 64 sufficient sufficient JJ cord-271701-tx0lqgff 291 65 for for IN cord-271701-tx0lqgff 291 66 template template NN cord-271701-tx0lqgff 291 67 switching switch VBG cord-271701-tx0lqgff 291 68 in in IN cord-271701-tx0lqgff 292 1 vitro vitro NNP cord-271701-tx0lqgff 292 2 Coronavirus Coronavirus NNP cord-271701-tx0lqgff 292 3 genome genome NN cord-271701-tx0lqgff 292 4 : : : cord-271701-tx0lqgff 292 5 prediction prediction NN cord-271701-tx0lqgff 292 6 of of IN cord-271701-tx0lqgff 292 7 putative putative JJ cord-271701-tx0lqgff 292 8 functional functional JJ cord-271701-tx0lqgff 292 9 domain domain NN cord-271701-tx0lqgff 292 10 in in IN cord-271701-tx0lqgff 292 11 the the DT cord-271701-tx0lqgff 292 12 non non JJ cord-271701-tx0lqgff 292 13 - - JJ cord-271701-tx0lqgff 292 14 structural structural JJ cord-271701-tx0lqgff 292 15 polyprotein polyprotein NN cord-271701-tx0lqgff 292 16 by by IN cord-271701-tx0lqgff 293 1 comparitive comparitive JJ cord-271701-tx0lqgff 293 2 amino amino NN cord-271701-tx0lqgff 293 3 acid acid NN cord-271701-tx0lqgff 293 4 sequence sequence NN cord-271701-tx0lqgff 293 5 analysis analysis NN cord-271701-tx0lqgff 293 6 Origin origin NN cord-271701-tx0lqgff 293 7 and and CC cord-271701-tx0lqgff 293 8 evolution evolution NN cord-271701-tx0lqgff 293 9 of of IN cord-271701-tx0lqgff 293 10 the the DT cord-271701-tx0lqgff 293 11 archeo archeo NN cord-271701-tx0lqgff 293 12 - - HYPH cord-271701-tx0lqgff 293 13 eukaryotic eukaryotic JJ cord-271701-tx0lqgff 293 14 primase primase NN cord-271701-tx0lqgff 293 15 superfamily superfamily NN cord-271701-tx0lqgff 293 16 and and CC cord-271701-tx0lqgff 293 17 related relate VBN cord-271701-tx0lqgff 293 18 palm palm NN cord-271701-tx0lqgff 293 19 - - HYPH cord-271701-tx0lqgff 293 20 domain domain NN cord-271701-tx0lqgff 293 21 proteins protein NNS cord-271701-tx0lqgff 293 22 : : : cord-271701-tx0lqgff 294 1 structural structural JJ cord-271701-tx0lqgff 294 2 insights insight NNS cord-271701-tx0lqgff 294 3 and and CC cord-271701-tx0lqgff 294 4 new new JJ cord-271701-tx0lqgff 294 5 members member NNS cord-271701-tx0lqgff 294 6 Fidelity Fidelity NNP cord-271701-tx0lqgff 294 7 of of IN cord-271701-tx0lqgff 294 8 DNA dna NN cord-271701-tx0lqgff 294 9 synthesis synthesis NN cord-271701-tx0lqgff 294 10 catalyzed catalyze VBN cord-271701-tx0lqgff 294 11 by by IN cord-271701-tx0lqgff 294 12 human human JJ cord-271701-tx0lqgff 294 13 DNA dna NN cord-271701-tx0lqgff 294 14 polymerase polymerase NN cord-271701-tx0lqgff 294 15 alpha alpha NN cord-271701-tx0lqgff 294 16 and and CC cord-271701-tx0lqgff 294 17 HIV-1 HIV-1 NNP cord-271701-tx0lqgff 294 18 reverse reverse VBP cord-271701-tx0lqgff 294 19 transcriptase transcriptase NN cord-271701-tx0lqgff 294 20 : : : cord-271701-tx0lqgff 294 21 effect effect NN cord-271701-tx0lqgff 294 22 of of IN cord-271701-tx0lqgff 294 23 reaction reaction NN cord-271701-tx0lqgff 295 1 pH pH NNP cord-271701-tx0lqgff 296 1 The the DT cord-271701-tx0lqgff 296 2 broad broad JJ cord-271701-tx0lqgff 296 3 - - HYPH cord-271701-tx0lqgff 296 4 spectrum spectrum NN cord-271701-tx0lqgff 296 5 antiviral antiviral JJ cord-271701-tx0lqgff 296 6 ribonucleoside ribonucleoside NN cord-271701-tx0lqgff 296 7 ribavirin ribavirin RB cord-271701-tx0lqgff 296 8 is be VBZ cord-271701-tx0lqgff 296 9 an an DT cord-271701-tx0lqgff 296 10 RNA RNA NNP cord-271701-tx0lqgff 296 11 virus virus NN cord-271701-tx0lqgff 296 12 mutagen mutagen NN cord-271701-tx0lqgff 296 13 Mechanisms Mechanisms NNPS cord-271701-tx0lqgff 296 14 of of IN cord-271701-tx0lqgff 296 15 action action NN cord-271701-tx0lqgff 296 16 of of IN cord-271701-tx0lqgff 296 17 ribavirin ribavirin NN cord-271701-tx0lqgff 296 18 against against IN cord-271701-tx0lqgff 296 19 distinct distinct JJ cord-271701-tx0lqgff 296 20 viruses virus NNS cord-271701-tx0lqgff 296 21 Inhibitory inhibitory JJ cord-271701-tx0lqgff 296 22 effect effect NN cord-271701-tx0lqgff 296 23 of of IN cord-271701-tx0lqgff 296 24 mizoribine mizoribine NN cord-271701-tx0lqgff 296 25 and and CC cord-271701-tx0lqgff 296 26 ribavirin ribavirin NN cord-271701-tx0lqgff 296 27 on on IN cord-271701-tx0lqgff 296 28 the the DT cord-271701-tx0lqgff 296 29 replication replication NN cord-271701-tx0lqgff 296 30 of of IN cord-271701-tx0lqgff 296 31 severe severe JJ cord-271701-tx0lqgff 296 32 acute acute JJ cord-271701-tx0lqgff 296 33 respiratory respiratory JJ cord-271701-tx0lqgff 296 34 syndrome syndrome NN cord-271701-tx0lqgff 296 35 ( ( -LRB- cord-271701-tx0lqgff 296 36 SARS)-associated sars)-associated CD cord-271701-tx0lqgff 296 37 coronavirus coronavirus NN cord-271701-tx0lqgff 296 38 Ribavirin ribavirin NN cord-271701-tx0lqgff 296 39 and and CC cord-271701-tx0lqgff 296 40 interferon interferon NN cord-271701-tx0lqgff 296 41 - - HYPH cord-271701-tx0lqgff 296 42 beta beta NN cord-271701-tx0lqgff 297 1 synergistically synergistically RB cord-271701-tx0lqgff 297 2 inhibit inhibit VB cord-271701-tx0lqgff 297 3 SARS SARS NNP cord-271701-tx0lqgff 297 4 - - HYPH cord-271701-tx0lqgff 297 5 associated associate VBN cord-271701-tx0lqgff 297 6 coronavirus coronavirus NN cord-271701-tx0lqgff 297 7 replication replication NN cord-271701-tx0lqgff 297 8 in in IN cord-271701-tx0lqgff 297 9 animal animal NN cord-271701-tx0lqgff 297 10 and and CC cord-271701-tx0lqgff 297 11 human human JJ cord-271701-tx0lqgff 297 12 cell cell NN cord-271701-tx0lqgff 297 13 lines line NNS cord-271701-tx0lqgff 298 1 Ovarian ovarian JJ cord-271701-tx0lqgff 298 2 tumor tumor NN cord-271701-tx0lqgff 298 3 domain domain NN cord-271701-tx0lqgff 298 4 - - HYPH cord-271701-tx0lqgff 298 5 containing contain VBG cord-271701-tx0lqgff 298 6 viral viral JJ cord-271701-tx0lqgff 298 7 proteases protease NNS cord-271701-tx0lqgff 298 8 evade evade VBP cord-271701-tx0lqgff 298 9 ubiquitin ubiquitin NN cord-271701-tx0lqgff 298 10 - - : cord-271701-tx0lqgff 298 11 and and CC cord-271701-tx0lqgff 298 12 ISG15-dependent isg15-dependent CD cord-271701-tx0lqgff 298 13 innate innate JJ cord-271701-tx0lqgff 298 14 immune immune JJ cord-271701-tx0lqgff 298 15 responses response NNS cord-271701-tx0lqgff 298 16 Crystal Crystal NNP cord-271701-tx0lqgff 298 17 structure structure NN cord-271701-tx0lqgff 298 18 of of IN cord-271701-tx0lqgff 298 19 poliovirus poliovirus NN cord-271701-tx0lqgff 298 20 3CD 3cd CD cord-271701-tx0lqgff 298 21 protein protein NN cord-271701-tx0lqgff 298 22 : : : cord-271701-tx0lqgff 298 23 virally virally RB cord-271701-tx0lqgff 298 24 encoded encode VBN cord-271701-tx0lqgff 298 25 protease protease NN cord-271701-tx0lqgff 298 26 and and CC cord-271701-tx0lqgff 298 27 precursor precursor NN cord-271701-tx0lqgff 298 28 to to IN cord-271701-tx0lqgff 298 29 the the DT cord-271701-tx0lqgff 298 30 RNA RNA NNP cord-271701-tx0lqgff 298 31 - - HYPH cord-271701-tx0lqgff 298 32 dependent dependent JJ cord-271701-tx0lqgff 298 33 RNA RNA NNP cord-271701-tx0lqgff 298 34 polymerase polymerase NN cord-271701-tx0lqgff 298 35 SARS SARS NNP cord-271701-tx0lqgff 298 36 - - HYPH cord-271701-tx0lqgff 298 37 coronavirus coronavirus NN cord-271701-tx0lqgff 298 38 replication replication NN cord-271701-tx0lqgff 298 39 / / SYM cord-271701-tx0lqgff 298 40 transcription transcription NN cord-271701-tx0lqgff 298 41 complexes complex NNS cord-271701-tx0lqgff 298 42 are be VBP cord-271701-tx0lqgff 298 43 membrane membrane NN cord-271701-tx0lqgff 298 44 - - HYPH cord-271701-tx0lqgff 298 45 protected protect VBN cord-271701-tx0lqgff 298 46 and and CC cord-271701-tx0lqgff 298 47 need need VB cord-271701-tx0lqgff 298 48 a a DT cord-271701-tx0lqgff 298 49 host host NN cord-271701-tx0lqgff 298 50 factor factor NN cord-271701-tx0lqgff 298 51 for for IN cord-271701-tx0lqgff 298 52 activity activity NN cord-271701-tx0lqgff 298 53 in in IN cord-271701-tx0lqgff 298 54 vitro vitro FW cord-271701-tx0lqgff 299 1 The the DT cord-271701-tx0lqgff 299 2 coronavirus coronavirus NN cord-271701-tx0lqgff 299 3 replicase replicase NN cord-271701-tx0lqgff 299 4 : : : cord-271701-tx0lqgff 299 5 insights insight NNS cord-271701-tx0lqgff 299 6 into into IN cord-271701-tx0lqgff 299 7 a a DT cord-271701-tx0lqgff 299 8 sophisticated sophisticated JJ cord-271701-tx0lqgff 299 9 enzyme enzyme NN cord-271701-tx0lqgff 299 10 machinery machinery NN cord-271701-tx0lqgff 299 11 Nidovirus Nidovirus NNP cord-271701-tx0lqgff 299 12 transcription transcription NN cord-271701-tx0lqgff 299 13 : : : cord-271701-tx0lqgff 299 14 how how WRB cord-271701-tx0lqgff 299 15 to to TO cord-271701-tx0lqgff 299 16 make make VB cord-271701-tx0lqgff 299 17 sense sense NN cord-271701-tx0lqgff 299 18 The the DT cord-271701-tx0lqgff 299 19 SARS SARS NNP cord-271701-tx0lqgff 299 20 - - HYPH cord-271701-tx0lqgff 299 21 coronavirus coronavirus NN cord-271701-tx0lqgff 299 22 PLnc plnc CD cord-271701-tx0lqgff 299 23 domain domain NN cord-271701-tx0lqgff 299 24 of of IN cord-271701-tx0lqgff 299 25 nsp3 nsp3 NNS cord-271701-tx0lqgff 299 26 as as IN cord-271701-tx0lqgff 299 27 a a DT cord-271701-tx0lqgff 299 28 replication replication NN cord-271701-tx0lqgff 299 29 / / SYM cord-271701-tx0lqgff 299 30 transcription transcription NN cord-271701-tx0lqgff 299 31 scaffolding scaffolding NN cord-271701-tx0lqgff 299 32 protein protein NN cord-271701-tx0lqgff 299 33 A a DT cord-271701-tx0lqgff 299 34 noncovalent noncovalent JJ cord-271701-tx0lqgff 299 35 class class NN cord-271701-tx0lqgff 299 36 of of IN cord-271701-tx0lqgff 299 37 papain papain NN cord-271701-tx0lqgff 299 38 - - HYPH cord-271701-tx0lqgff 299 39 like like UH cord-271701-tx0lqgff 299 40 protease/ protease/ NNS cord-271701-tx0lqgff 299 41 deubiquitinase deubiquitinase NN cord-271701-tx0lqgff 299 42 inhibitors inhibitor NNS cord-271701-tx0lqgff 299 43 blocks block VBZ cord-271701-tx0lqgff 299 44 SARS SARS NNP cord-271701-tx0lqgff 299 45 virus virus NN cord-271701-tx0lqgff 299 46 replication replication NN cord-271701-tx0lqgff 299 47 Multiple multiple JJ cord-271701-tx0lqgff 299 48 enzymatic enzymatic JJ cord-271701-tx0lqgff 299 49 activities activity NNS cord-271701-tx0lqgff 299 50 associated associate VBN cord-271701-tx0lqgff 299 51 with with IN cord-271701-tx0lqgff 299 52 severe severe JJ cord-271701-tx0lqgff 299 53 acute acute JJ cord-271701-tx0lqgff 299 54 respiratory respiratory JJ cord-271701-tx0lqgff 299 55 syndrome syndrome NN cord-271701-tx0lqgff 299 56 coronavirus coronavirus NN cord-271701-tx0lqgff 299 57 helicase helicase NN cord-271701-tx0lqgff 300 1 In in IN cord-271701-tx0lqgff 300 2 vitro vitro FW cord-271701-tx0lqgff 300 3 reconstitution reconstitution NN cord-271701-tx0lqgff 300 4 of of IN cord-271701-tx0lqgff 300 5 SARS SARS NNP cord-271701-tx0lqgff 300 6 - - HYPH cord-271701-tx0lqgff 300 7 coronavirus coronavirus NN cord-271701-tx0lqgff 300 8 mRNA mrna NN cord-271701-tx0lqgff 300 9 cap cap NN cord-271701-tx0lqgff 300 10 methylation methylation NN cord-271701-tx0lqgff 300 11 Processing processing NN cord-271701-tx0lqgff 300 12 of of IN cord-271701-tx0lqgff 300 13 open open JJ cord-271701-tx0lqgff 300 14 reading reading NN cord-271701-tx0lqgff 300 15 frame frame NN cord-271701-tx0lqgff 300 16 1a 1a CD cord-271701-tx0lqgff 300 17 replicase replicase NNP cord-271701-tx0lqgff 300 18 proteins protein NNS cord-271701-tx0lqgff 300 19 nsp7 nsp7 PRP cord-271701-tx0lqgff 300 20 to to IN cord-271701-tx0lqgff 300 21 nsp10 nsp10 PRP cord-271701-tx0lqgff 300 22 in in IN cord-271701-tx0lqgff 300 23 murine murine JJ cord-271701-tx0lqgff 300 24 hepatitis hepatitis NN cord-271701-tx0lqgff 300 25 virus virus NN cord-271701-tx0lqgff 300 26 strain strain NN cord-271701-tx0lqgff 300 27 A59 A59 NNP cord-271701-tx0lqgff 300 28 replication replication NN cord-271701-tx0lqgff 301 1 Genetic genetic JJ cord-271701-tx0lqgff 301 2 interactions interaction NNS cord-271701-tx0lqgff 301 3 between between IN cord-271701-tx0lqgff 301 4 an an DT cord-271701-tx0lqgff 301 5 essential essential JJ cord-271701-tx0lqgff 301 6 3 3 CD cord-271701-tx0lqgff 301 7 0 0 CD cord-271701-tx0lqgff 301 8 cis cis NNP cord-271701-tx0lqgff 301 9 - - HYPH cord-271701-tx0lqgff 301 10 acting act VBG cord-271701-tx0lqgff 301 11 RNA RNA NNP cord-271701-tx0lqgff 301 12 pseudoknot pseudoknot NNP cord-271701-tx0lqgff 301 13 , , , cord-271701-tx0lqgff 301 14 replicase replicase NNP cord-271701-tx0lqgff 301 15 gene gene NN cord-271701-tx0lqgff 301 16 products product NNS cord-271701-tx0lqgff 301 17 , , , cord-271701-tx0lqgff 301 18 and and CC cord-271701-tx0lqgff 301 19 the the DT cord-271701-tx0lqgff 301 20 extreme extreme JJ cord-271701-tx0lqgff 301 21 3 3 CD cord-271701-tx0lqgff 301 22 0 0 CD cord-271701-tx0lqgff 301 23 end end NN cord-271701-tx0lqgff 301 24 of of IN cord-271701-tx0lqgff 301 25 the the DT cord-271701-tx0lqgff 301 26 mouse mouse NN cord-271701-tx0lqgff 301 27 coronavirus coronavirus NN cord-271701-tx0lqgff 301 28 genome genome NN cord-271701-tx0lqgff 302 1 The the DT cord-271701-tx0lqgff 302 2 authors author NNS cord-271701-tx0lqgff 302 3 thank thank VBP cord-271701-tx0lqgff 302 4 Dr Dr NNP cord-271701-tx0lqgff 302 5 Danny Danny NNP cord-271701-tx0lqgff 302 6 Nedialkova Nedialkova NNP cord-271701-tx0lqgff 302 7 , , , cord-271701-tx0lqgff 302 8 Lorenzo Lorenzo NNP cord-271701-tx0lqgff 302 9 Subissi Subissi NNP cord-271701-tx0lqgff 302 10 , , , cord-271701-tx0lqgff 302 11 Dr Dr NNP cord-271701-tx0lqgff 302 12 Isabelle Isabelle NNP cord-271701-tx0lqgff 302 13 Imbert Imbert NNP cord-271701-tx0lqgff 302 14 , , , cord-271701-tx0lqgff 302 15 Dr Dr NNP cord-271701-tx0lqgff 302 16 Bruno Bruno NNP cord-271701-tx0lqgff 302 17 Canard Canard NNP cord-271701-tx0lqgff 302 18 and and CC cord-271701-tx0lqgff 302 19 Dr Dr NNP cord-271701-tx0lqgff 302 20 Alexander Alexander NNP cord-271701-tx0lqgff 302 21 Gorbalenya Gorbalenya NNP cord-271701-tx0lqgff 302 22 for for IN cord-271701-tx0lqgff 302 23 stimulating stimulate VBG cord-271701-tx0lqgff 302 24 discussions discussion NNS cord-271701-tx0lqgff 302 25 ; ; : cord-271701-tx0lqgff 302 26 Linda Linda NNP cord-271701-tx0lqgff 302 27 Boomaars Boomaars NNP cord-271701-tx0lqgff 302 28 - - HYPH cord-271701-tx0lqgff 302 29 van van NNP cord-271701-tx0lqgff 302 30 der der NNP cord-271701-tx0lqgff 302 31 Zanden Zanden NNP cord-271701-tx0lqgff 302 32 and and CC cord-271701-tx0lqgff 302 33 Dr Dr NNP cord-271701-tx0lqgff 302 34 Clara Clara NNP cord-271701-tx0lqgff 302 35 Posthuma Posthuma NNP cord-271701-tx0lqgff 302 36 for for IN cord-271701-tx0lqgff 302 37 assistance assistance NN cord-271701-tx0lqgff 302 38 with with IN cord-271701-tx0lqgff 302 39 nsp5 nsp5 NN cord-271701-tx0lqgff 302 40 purification purification NN cord-271701-tx0lqgff 302 41 ; ; : cord-271701-tx0lqgff 302 42 Puck Puck NNP cord-271701-tx0lqgff 302 43 van van NNP cord-271701-tx0lqgff 302 44 Kasteren Kasteren NNP cord-271701-tx0lqgff 302 45 and and CC cord-271701-tx0lqgff 302 46 Marjolein Marjolein NNP cord-271701-tx0lqgff 302 47 Kikkert Kikkert NNP cord-271701-tx0lqgff 302 48 for for IN cord-271701-tx0lqgff 302 49 providing provide VBG cord-271701-tx0lqgff 302 50 the the DT cord-271701-tx0lqgff 302 51 EAV EAV NNP cord-271701-tx0lqgff 302 52 nsp2 nsp2 NNP cord-271701-tx0lqgff 302 53 protease protease NN cord-271701-tx0lqgff 302 54 ; ; : cord-271701-tx0lqgff 302 55 and and CC cord-271701-tx0lqgff 302 56 Jos Jos NNP cord-271701-tx0lqgff 302 57 van van NNP cord-271701-tx0lqgff 302 58 Vugt Vugt NNP cord-271701-tx0lqgff 302 59 for for IN cord-271701-tx0lqgff 302 60 his -PRON- PRP$ cord-271701-tx0lqgff 302 61 initial initial JJ cord-271701-tx0lqgff 302 62 work work NN cord-271701-tx0lqgff 302 63 on on IN cord-271701-tx0lqgff 302 64 nsp8 nsp8 NN cord-271701-tx0lqgff 302 65 in in IN cord-271701-tx0lqgff 302 66 our -PRON- PRP$ cord-271701-tx0lqgff 302 67 lab lab NN cord-271701-tx0lqgff 302 68 . . . cord-271701-tx0lqgff 302 69 _SP cord-271701-tx0lqgff 303 1 Supplementary Supplementary NNP cord-271701-tx0lqgff 303 2 Data Data NNP cord-271701-tx0lqgff 303 3 are be VBP cord-271701-tx0lqgff 303 4 available available JJ cord-271701-tx0lqgff 303 5 at at IN cord-271701-tx0lqgff 303 6 NAR NAR NNP cord-271701-tx0lqgff 303 7 Online Online NNP cord-271701-tx0lqgff 303 8 . . . cord-271701-tx0lqgff 304 1 Conflict conflict NN cord-271701-tx0lqgff 304 2 of of IN cord-271701-tx0lqgff 304 3 interest interest NN cord-271701-tx0lqgff 304 4 statement statement NN cord-271701-tx0lqgff 304 5 . . . cord-271701-tx0lqgff 305 1 None none NN cord-271701-tx0lqgff 305 2 declared declare VBD cord-271701-tx0lqgff 305 3 . . .