id	sid	tid	token	lemma	pos
cord-004862-yv76yvy5	1	1	key	key	JJ
cord-004862-yv76yvy5	2	1	:	:	:
cord-004862-yv76yvy5	2	2	cord-004862-yv76yvy5	cord-004862-yv76yvy5	NNS
cord-004862-yv76yvy5	2	3	authors	author	NNS
cord-004862-yv76yvy5	2	4	:	:	:
cord-004862-yv76yvy5	2	5	Demers	Demers	NNP
cord-004862-yv76yvy5	2	6	,	,	,
cord-004862-yv76yvy5	2	7	G.	G.	NNP
cord-004862-yv76yvy5	2	8	William	William	NNP
cord-004862-yv76yvy5	2	9	;	;	:
cord-004862-yv76yvy5	2	10	Matunis	Matunis	NNP
cord-004862-yv76yvy5	2	11	,	,	,
cord-004862-yv76yvy5	2	12	Michael	Michael	NNP
cord-004862-yv76yvy5	2	13	J.	J.	NNP
cord-004862-yv76yvy5	2	14	;	;	:
cord-004862-yv76yvy5	2	15	Hardison	Hardison	NNP
cord-004862-yv76yvy5	2	16	,	,	,
cord-004862-yv76yvy5	2	17	Ross	Ross	NNP
cord-004862-yv76yvy5	2	18	C.	C.	NNP
cord-004862-yv76yvy5	2	19	title	title	NN
cord-004862-yv76yvy5	2	20	:	:	:
cord-004862-yv76yvy5	3	1	The	the	DT
cord-004862-yv76yvy5	3	2	L1	L1	NNP
cord-004862-yv76yvy5	3	3	family	family	NN
cord-004862-yv76yvy5	3	4	of	of	IN
cord-004862-yv76yvy5	3	5	long	long	RB
cord-004862-yv76yvy5	3	6	interspersed	intersperse	VBN
cord-004862-yv76yvy5	3	7	repetitive	repetitive	JJ
cord-004862-yv76yvy5	3	8	DNA	dna	NN
cord-004862-yv76yvy5	3	9	in	in	IN
cord-004862-yv76yvy5	3	10	rabbits	rabbit	NNS
cord-004862-yv76yvy5	3	11	:	:	:
cord-004862-yv76yvy5	3	12	Sequence	sequence	NN
cord-004862-yv76yvy5	3	13	,	,	,
cord-004862-yv76yvy5	3	14	copy	copy	NN
cord-004862-yv76yvy5	3	15	number	number	NN
cord-004862-yv76yvy5	3	16	,	,	,
cord-004862-yv76yvy5	3	17	conserved	conserve	VBN
cord-004862-yv76yvy5	3	18	open	open	JJ
cord-004862-yv76yvy5	3	19	reading	reading	NN
cord-004862-yv76yvy5	3	20	frames	frame	NNS
cord-004862-yv76yvy5	3	21	,	,	,
cord-004862-yv76yvy5	3	22	and	and	CC
cord-004862-yv76yvy5	3	23	similarity	similarity	NN
cord-004862-yv76yvy5	3	24	to	to	IN
cord-004862-yv76yvy5	3	25	keratin	keratin	NN
cord-004862-yv76yvy5	3	26	date	date	NN
cord-004862-yv76yvy5	3	27	:	:	:
cord-004862-yv76yvy5	3	28	1989	1989	CD
cord-004862-yv76yvy5	3	29	journal	journal	NNP
cord-004862-yv76yvy5	3	30	:	:	:
cord-004862-yv76yvy5	4	1	J	J	NNP
cord-004862-yv76yvy5	4	2	Mol	Mol	NNP
cord-004862-yv76yvy5	4	3	Evol	Evol	NNP
cord-004862-yv76yvy5	4	4	DOI	doi	NN
cord-004862-yv76yvy5	4	5	:	:	:
cord-004862-yv76yvy5	5	1	10.1007	10.1007	CD
cord-004862-yv76yvy5	5	2	/	/	SYM
cord-004862-yv76yvy5	5	3	bf02106177	bf02106177	NN
cord-004862-yv76yvy5	5	4	sha	sha	NNP
cord-004862-yv76yvy5	5	5	:	:	:
cord-004862-yv76yvy5	6	1	ae5dbcbf679a830e8a0c021339476a42c8285a08	ae5dbcbf679a830e8a0c021339476a42c8285a08	NNP
cord-004862-yv76yvy5	6	2	doc_id	doc_id	CD
cord-004862-yv76yvy5	6	3	:	:	:
cord-004862-yv76yvy5	6	4	4862	4862	CD
cord-004862-yv76yvy5	7	1	cord_uid	cord_uid	NNS
cord-004862-yv76yvy5	7	2	:	:	:
cord-004862-yv76yvy5	7	3	yv76yvy5	yv76yvy5	XX
cord-004862-yv76yvy5	8	1	The	the	DT
cord-004862-yv76yvy5	8	2	L1	L1	NNP
cord-004862-yv76yvy5	8	3	family	family	NN
cord-004862-yv76yvy5	8	4	of	of	IN
cord-004862-yv76yvy5	8	5	long	long	RB
cord-004862-yv76yvy5	8	6	interspersed	intersperse	VBN
cord-004862-yv76yvy5	8	7	repetitive	repetitive	JJ
cord-004862-yv76yvy5	8	8	DNA	dna	NN
cord-004862-yv76yvy5	8	9	in	in	IN
cord-004862-yv76yvy5	8	10	the	the	DT
cord-004862-yv76yvy5	8	11	rabbit	rabbit	NN
cord-004862-yv76yvy5	8	12	genome	genome	NN
cord-004862-yv76yvy5	8	13	(	(	-LRB-
cord-004862-yv76yvy5	8	14	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	8	15	)	)	-RRB-
cord-004862-yv76yvy5	8	16	has	have	VBZ
cord-004862-yv76yvy5	8	17	been	be	VBN
cord-004862-yv76yvy5	8	18	studied	study	VBN
cord-004862-yv76yvy5	8	19	by	by	IN
cord-004862-yv76yvy5	8	20	determining	determine	VBG
cord-004862-yv76yvy5	8	21	the	the	DT
cord-004862-yv76yvy5	8	22	sequence	sequence	NN
cord-004862-yv76yvy5	8	23	of	of	IN
cord-004862-yv76yvy5	8	24	the	the	DT
cord-004862-yv76yvy5	8	25	five	five	CD
cord-004862-yv76yvy5	8	26	L1	L1	NNP
cord-004862-yv76yvy5	8	27	repeats	repeat	VBZ
cord-004862-yv76yvy5	8	28	in	in	IN
cord-004862-yv76yvy5	8	29	the	the	DT
cord-004862-yv76yvy5	8	30	rabbit	rabbit	NN
cord-004862-yv76yvy5	8	31	β	β	NN
cord-004862-yv76yvy5	8	32	-	-	HYPH
cord-004862-yv76yvy5	8	33	like	like	JJ
cord-004862-yv76yvy5	8	34	globin	globin	NN
cord-004862-yv76yvy5	8	35	gene	gene	NN
cord-004862-yv76yvy5	8	36	cluster	cluster	NN
cord-004862-yv76yvy5	8	37	and	and	CC
cord-004862-yv76yvy5	8	38	by	by	IN
cord-004862-yv76yvy5	8	39	hybridization	hybridization	NN
cord-004862-yv76yvy5	8	40	analysis	analysis	NN
cord-004862-yv76yvy5	8	41	of	of	IN
cord-004862-yv76yvy5	8	42	other	other	JJ
cord-004862-yv76yvy5	8	43	L1	L1	NNP
cord-004862-yv76yvy5	8	44	repeats	repeat	VBZ
cord-004862-yv76yvy5	8	45	in	in	IN
cord-004862-yv76yvy5	8	46	the	the	DT
cord-004862-yv76yvy5	8	47	genome	genome	NN
cord-004862-yv76yvy5	8	48	.	.	.
cord-004862-yv76yvy5	9	1	L1Oc	l1oc	PRP
cord-004862-yv76yvy5	9	2	repeats	repeat	VBZ
cord-004862-yv76yvy5	9	3	have	have	VBP
cord-004862-yv76yvy5	9	4	a	a	DT
cord-004862-yv76yvy5	9	5	common	common	JJ
cord-004862-yv76yvy5	9	6	3′	3′	CD
cord-004862-yv76yvy5	9	7	end	end	NN
cord-004862-yv76yvy5	9	8	that	that	WDT
cord-004862-yv76yvy5	9	9	terminates	terminate	VBZ
cord-004862-yv76yvy5	9	10	in	in	IN
cord-004862-yv76yvy5	9	11	a	a	DT
cord-004862-yv76yvy5	9	12	poly	poly	NN
cord-004862-yv76yvy5	9	13	A	A	NNP
cord-004862-yv76yvy5	9	14	addition	addition	NN
cord-004862-yv76yvy5	9	15	signal	signal	NN
cord-004862-yv76yvy5	9	16	and	and	CC
cord-004862-yv76yvy5	9	17	an	an	DT
cord-004862-yv76yvy5	9	18	A	a	NN
cord-004862-yv76yvy5	9	19	-	-	HYPH
cord-004862-yv76yvy5	9	20	rich	rich	JJ
cord-004862-yv76yvy5	9	21	tract	tract	NN
cord-004862-yv76yvy5	9	22	,	,	,
cord-004862-yv76yvy5	9	23	but	but	CC
cord-004862-yv76yvy5	9	24	individual	individual	NN
cord-004862-yv76yvy5	9	25	repeats	repeat	NNS
cord-004862-yv76yvy5	9	26	have	have	VBP
cord-004862-yv76yvy5	9	27	different	different	JJ
cord-004862-yv76yvy5	9	28	5′	5′	CD
cord-004862-yv76yvy5	9	29	ends	end	NNS
cord-004862-yv76yvy5	9	30	,	,	,
cord-004862-yv76yvy5	9	31	indicating	indicate	VBG
cord-004862-yv76yvy5	9	32	a	a	DT
cord-004862-yv76yvy5	9	33	polar	polar	JJ
cord-004862-yv76yvy5	9	34	truncation	truncation	NN
cord-004862-yv76yvy5	9	35	from	from	IN
cord-004862-yv76yvy5	9	36	the	the	DT
cord-004862-yv76yvy5	9	37	5′	5′	CD
cord-004862-yv76yvy5	9	38	end	end	NN
cord-004862-yv76yvy5	9	39	during	during	IN
cord-004862-yv76yvy5	9	40	their	-PRON-	PRP$
cord-004862-yv76yvy5	9	41	synthesis	synthesis	NN
cord-004862-yv76yvy5	9	42	or	or	CC
cord-004862-yv76yvy5	9	43	propagation	propagation	NN
cord-004862-yv76yvy5	9	44	.	.	.
cord-004862-yv76yvy5	10	1	As	as	IN
cord-004862-yv76yvy5	10	2	a	a	DT
cord-004862-yv76yvy5	10	3	result	result	NN
cord-004862-yv76yvy5	10	4	of	of	IN
cord-004862-yv76yvy5	10	5	the	the	DT
cord-004862-yv76yvy5	10	6	polar	polar	JJ
cord-004862-yv76yvy5	10	7	truncations	truncation	NNS
cord-004862-yv76yvy5	10	8	,	,	,
cord-004862-yv76yvy5	10	9	the	the	DT
cord-004862-yv76yvy5	10	10	5′	5′	CD
cord-004862-yv76yvy5	10	11	end	end	NN
cord-004862-yv76yvy5	10	12	of	of	IN
cord-004862-yv76yvy5	10	13	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	10	14	is	be	VBZ
cord-004862-yv76yvy5	10	15	present	present	JJ
cord-004862-yv76yvy5	10	16	in	in	IN
cord-004862-yv76yvy5	10	17	about	about	RB
cord-004862-yv76yvy5	10	18	11,000	11,000	CD
cord-004862-yv76yvy5	10	19	copies	copy	NNS
cord-004862-yv76yvy5	10	20	per	per	IN
cord-004862-yv76yvy5	10	21	haploid	haploid	JJ
cord-004862-yv76yvy5	10	22	genome	genome	NN
cord-004862-yv76yvy5	10	23	,	,	,
cord-004862-yv76yvy5	10	24	whereas	whereas	IN
cord-004862-yv76yvy5	10	25	the	the	DT
cord-004862-yv76yvy5	10	26	3′	3′	CD
cord-004862-yv76yvy5	10	27	end	end	NN
cord-004862-yv76yvy5	10	28	is	be	VBZ
cord-004862-yv76yvy5	10	29	present	present	JJ
cord-004862-yv76yvy5	10	30	in	in	IN
cord-004862-yv76yvy5	10	31	at	at	RB
cord-004862-yv76yvy5	10	32	least	least	RBS
cord-004862-yv76yvy5	10	33	66,000	66,000	CD
cord-004862-yv76yvy5	10	34	copies	copy	NNS
cord-004862-yv76yvy5	10	35	per	per	IN
cord-004862-yv76yvy5	10	36	haploid	haploid	JJ
cord-004862-yv76yvy5	10	37	genome	genome	NN
cord-004862-yv76yvy5	10	38	.	.	.
cord-004862-yv76yvy5	11	1	One	one	CD
cord-004862-yv76yvy5	11	2	type	type	NN
cord-004862-yv76yvy5	11	3	of	of	IN
cord-004862-yv76yvy5	11	4	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	11	5	repeat	repeat	NN
cord-004862-yv76yvy5	11	6	has	have	VBZ
cord-004862-yv76yvy5	11	7	internal	internal	JJ
cord-004862-yv76yvy5	11	8	direct	direct	JJ
cord-004862-yv76yvy5	11	9	repeats	repeat	NNS
cord-004862-yv76yvy5	11	10	of	of	IN
cord-004862-yv76yvy5	11	11	78	78	CD
cord-004862-yv76yvy5	11	12	bp	bp	NNS
cord-004862-yv76yvy5	11	13	in	in	IN
cord-004862-yv76yvy5	11	14	the	the	DT
cord-004862-yv76yvy5	11	15	3′	3′	CD
cord-004862-yv76yvy5	11	16	untranslated	untranslated	JJ
cord-004862-yv76yvy5	11	17	region	region	NN
cord-004862-yv76yvy5	11	18	,	,	,
cord-004862-yv76yvy5	11	19	whereas	whereas	IN
cord-004862-yv76yvy5	11	20	other	other	JJ
cord-004862-yv76yvy5	11	21	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	11	22	repeats	repeat	VBZ
cord-004862-yv76yvy5	11	23	have	have	VBP
cord-004862-yv76yvy5	11	24	only	only	RB
cord-004862-yv76yvy5	11	25	one	one	CD
cord-004862-yv76yvy5	11	26	copy	copy	NN
cord-004862-yv76yvy5	11	27	of	of	IN
cord-004862-yv76yvy5	11	28	this	this	DT
cord-004862-yv76yvy5	11	29	sequence	sequence	NN
cord-004862-yv76yvy5	11	30	.	.	.
cord-004862-yv76yvy5	12	1	The	the	DT
cord-004862-yv76yvy5	12	2	longest	long	JJS
cord-004862-yv76yvy5	12	3	repeat	repeat	NN
cord-004862-yv76yvy5	12	4	sequenced	sequence	VBN
cord-004862-yv76yvy5	12	5	,	,	,
cord-004862-yv76yvy5	12	6	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	12	7	,	,	,
cord-004862-yv76yvy5	12	8	is	be	VBZ
cord-004862-yv76yvy5	12	9	6.5	6.5	CD
cord-004862-yv76yvy5	12	10	kb	kb	NNP
cord-004862-yv76yvy5	12	11	long	long	JJ
cord-004862-yv76yvy5	12	12	,	,	,
cord-004862-yv76yvy5	12	13	and	and	CC
cord-004862-yv76yvy5	12	14	genomic	genomic	JJ
cord-004862-yv76yvy5	12	15	blot	blot	NN
cord-004862-yv76yvy5	12	16	-	-	HYPH
cord-004862-yv76yvy5	12	17	hybridization	hybridization	NN
cord-004862-yv76yvy5	12	18	data	datum	NNS
cord-004862-yv76yvy5	12	19	using	use	VBG
cord-004862-yv76yvy5	12	20	probes	probe	NNS
cord-004862-yv76yvy5	12	21	from	from	IN
cord-004862-yv76yvy5	12	22	the	the	DT
cord-004862-yv76yvy5	12	23	5′	5′	CD
cord-004862-yv76yvy5	12	24	end	end	NN
cord-004862-yv76yvy5	12	25	of	of	IN
cord-004862-yv76yvy5	12	26	L1Oc5	L1Oc5	NNS
cord-004862-yv76yvy5	12	27	indicate	indicate	VBP
cord-004862-yv76yvy5	12	28	that	that	IN
cord-004862-yv76yvy5	12	29	a	a	DT
cord-004862-yv76yvy5	12	30	full	full	JJ
cord-004862-yv76yvy5	12	31	length	length	NN
cord-004862-yv76yvy5	12	32	L1Oc	l1oc	PRP
cord-004862-yv76yvy5	12	33	repeat	repeat	NN
cord-004862-yv76yvy5	12	34	is	be	VBZ
cord-004862-yv76yvy5	12	35	about	about	RB
cord-004862-yv76yvy5	12	36	7.5	7.5	CD
cord-004862-yv76yvy5	12	37	kb	kb	NNP
cord-004862-yv76yvy5	12	38	long	long	RB
cord-004862-yv76yvy5	12	39	,	,	,
cord-004862-yv76yvy5	12	40	extending	extend	VBG
cord-004862-yv76yvy5	12	41	about	about	RB
cord-004862-yv76yvy5	12	42	1	1	CD
cord-004862-yv76yvy5	12	43	kb	kb	CD
cord-004862-yv76yvy5	12	44	5′	5′	CD
cord-004862-yv76yvy5	12	45	to	to	IN
cord-004862-yv76yvy5	12	46	the	the	DT
cord-004862-yv76yvy5	12	47	sequenced	sequence	VBN
cord-004862-yv76yvy5	12	48	region	region	NN
cord-004862-yv76yvy5	12	49	.	.	.
cord-004862-yv76yvy5	13	1	The	the	DT
cord-004862-yv76yvy5	13	2	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	13	3	sequence	sequence	NN
cord-004862-yv76yvy5	13	4	has	have	VBZ
cord-004862-yv76yvy5	13	5	long	long	RB
cord-004862-yv76yvy5	13	6	open	open	JJ
cord-004862-yv76yvy5	13	7	reading	reading	NN
cord-004862-yv76yvy5	13	8	frames	frame	NNS
cord-004862-yv76yvy5	13	9	(	(	-LRB-
cord-004862-yv76yvy5	13	10	ORFs	ORFs	NNP
cord-004862-yv76yvy5	13	11	)	)	-RRB-
cord-004862-yv76yvy5	13	12	that	that	WDT
cord-004862-yv76yvy5	13	13	correspond	correspond	VBP
cord-004862-yv76yvy5	13	14	to	to	IN
cord-004862-yv76yvy5	13	15	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	13	16	and	and	CC
cord-004862-yv76yvy5	13	17	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	13	18	described	describe	VBD
cord-004862-yv76yvy5	13	19	in	in	IN
cord-004862-yv76yvy5	13	20	the	the	DT
cord-004862-yv76yvy5	13	21	mouse	mouse	NN
cord-004862-yv76yvy5	13	22	L1	L1	NNP
cord-004862-yv76yvy5	13	23	sequence	sequence	NN
cord-004862-yv76yvy5	13	24	.	.	.
cord-004862-yv76yvy5	14	1	In	in	IN
cord-004862-yv76yvy5	14	2	contrast	contrast	NN
cord-004862-yv76yvy5	14	3	to	to	IN
cord-004862-yv76yvy5	14	4	the	the	DT
cord-004862-yv76yvy5	14	5	overlapping	overlap	VBG
cord-004862-yv76yvy5	14	6	reading	reading	NN
cord-004862-yv76yvy5	14	7	frames	frame	NNS
cord-004862-yv76yvy5	14	8	seen	see	VBN
cord-004862-yv76yvy5	14	9	for	for	IN
cord-004862-yv76yvy5	14	10	mouse	mouse	NN
cord-004862-yv76yvy5	14	11	L1	L1	NNP
cord-004862-yv76yvy5	14	12	,	,	,
cord-004862-yv76yvy5	14	13	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	14	14	and	and	CC
cord-004862-yv76yvy5	14	15	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	14	16	are	be	VBP
cord-004862-yv76yvy5	14	17	in	in	IN
cord-004862-yv76yvy5	14	18	the	the	DT
cord-004862-yv76yvy5	14	19	same	same	JJ
cord-004862-yv76yvy5	14	20	reading	reading	NN
cord-004862-yv76yvy5	14	21	frame	frame	NN
cord-004862-yv76yvy5	14	22	in	in	IN
cord-004862-yv76yvy5	14	23	rabbit	rabbit	NN
cord-004862-yv76yvy5	14	24	and	and	CC
cord-004862-yv76yvy5	14	25	human	human	JJ
cord-004862-yv76yvy5	14	26	L1s	L1s	NNP
cord-004862-yv76yvy5	14	27	,	,	,
cord-004862-yv76yvy5	14	28	resulting	result	VBG
cord-004862-yv76yvy5	14	29	in	in	IN
cord-004862-yv76yvy5	14	30	a	a	DT
cord-004862-yv76yvy5	14	31	discistronic	discistronic	JJ
cord-004862-yv76yvy5	14	32	structure	structure	NN
cord-004862-yv76yvy5	14	33	.	.	.
cord-004862-yv76yvy5	15	1	The	the	DT
cord-004862-yv76yvy5	15	2	region	region	NN
cord-004862-yv76yvy5	15	3	between	between	IN
cord-004862-yv76yvy5	15	4	the	the	DT
cord-004862-yv76yvy5	15	5	likely	likely	JJ
cord-004862-yv76yvy5	15	6	stop	stop	NN
cord-004862-yv76yvy5	15	7	codon	codon	NN
cord-004862-yv76yvy5	15	8	for	for	IN
cord-004862-yv76yvy5	15	9	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	15	10	and	and	CC
cord-004862-yv76yvy5	15	11	the	the	DT
cord-004862-yv76yvy5	15	12	proposed	propose	VBN
cord-004862-yv76yvy5	15	13	start	start	NN
cord-004862-yv76yvy5	15	14	codon	codon	NNP
cord-004862-yv76yvy5	15	15	for	for	IN
cord-004862-yv76yvy5	15	16	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	16	1	is	be	VBZ
cord-004862-yv76yvy5	16	2	not	not	RB
cord-004862-yv76yvy5	16	3	conserved	conserve	VBN
cord-004862-yv76yvy5	16	4	in	in	IN
cord-004862-yv76yvy5	16	5	interspecies	interspecies	JJ
cord-004862-yv76yvy5	16	6	comparisons	comparison	NNS
cord-004862-yv76yvy5	16	7	,	,	,
cord-004862-yv76yvy5	16	8	which	which	WDT
cord-004862-yv76yvy5	16	9	is	be	VBZ
cord-004862-yv76yvy5	16	10	further	further	JJ
cord-004862-yv76yvy5	16	11	evidence	evidence	NN
cord-004862-yv76yvy5	16	12	that	that	IN
cord-004862-yv76yvy5	16	13	this	this	DT
cord-004862-yv76yvy5	16	14	short	short	JJ
cord-004862-yv76yvy5	16	15	region	region	NN
cord-004862-yv76yvy5	16	16	does	do	VBZ
cord-004862-yv76yvy5	16	17	not	not	RB
cord-004862-yv76yvy5	16	18	encode	encode	VB
cord-004862-yv76yvy5	16	19	part	part	NN
cord-004862-yv76yvy5	16	20	of	of	IN
cord-004862-yv76yvy5	16	21	a	a	DT
cord-004862-yv76yvy5	16	22	protein	protein	NN
cord-004862-yv76yvy5	16	23	.	.	.
cord-004862-yv76yvy5	17	1	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	17	2	appears	appear	VBZ
cord-004862-yv76yvy5	17	3	to	to	TO
cord-004862-yv76yvy5	17	4	be	be	VB
cord-004862-yv76yvy5	17	5	a	a	DT
cord-004862-yv76yvy5	17	6	hybrid	hybrid	NN
cord-004862-yv76yvy5	17	7	of	of	IN
cord-004862-yv76yvy5	17	8	sequences	sequence	NNS
cord-004862-yv76yvy5	17	9	,	,	,
cord-004862-yv76yvy5	17	10	of	of	IN
cord-004862-yv76yvy5	17	11	which	which	WDT
cord-004862-yv76yvy5	17	12	the	the	DT
cord-004862-yv76yvy5	17	13	3′	3′	CD
cord-004862-yv76yvy5	17	14	half	half	NN
cord-004862-yv76yvy5	17	15	is	be	VBZ
cord-004862-yv76yvy5	17	16	unique	unique	JJ
cord-004862-yv76yvy5	17	17	to	to	IN
cord-004862-yv76yvy5	17	18	and	and	CC
cord-004862-yv76yvy5	17	19	conserved	conserve	VBN
cord-004862-yv76yvy5	17	20	in	in	IN
cord-004862-yv76yvy5	17	21	mammalian	mammalian	JJ
cord-004862-yv76yvy5	17	22	L1	L1	NNP
cord-004862-yv76yvy5	17	23	repeats	repeat	VBZ
cord-004862-yv76yvy5	17	24	.	.	.
cord-004862-yv76yvy5	18	1	The	the	DT
cord-004862-yv76yvy5	18	2	5′	5′	CD
cord-004862-yv76yvy5	18	3	half	half	NN
cord-004862-yv76yvy5	18	4	of	of	IN
cord-004862-yv76yvy5	18	5	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	18	6	is	be	VBZ
cord-004862-yv76yvy5	18	7	not	not	RB
cord-004862-yv76yvy5	18	8	conserved	conserve	VBN
cord-004862-yv76yvy5	18	9	between	between	IN
cord-004862-yv76yvy5	18	10	mammalian	mammalian	JJ
cord-004862-yv76yvy5	18	11	L1	L1	NNP
cord-004862-yv76yvy5	18	12	repeats	repeat	VBZ
cord-004862-yv76yvy5	18	13	,	,	,
cord-004862-yv76yvy5	18	14	but	but	CC
cord-004862-yv76yvy5	18	15	this	this	DT
cord-004862-yv76yvy5	18	16	segment	segment	NN
cord-004862-yv76yvy5	18	17	of	of	IN
cord-004862-yv76yvy5	18	18	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	18	19	is	be	VBZ
cord-004862-yv76yvy5	18	20	related	relate	VBN
cord-004862-yv76yvy5	18	21	significantly	significantly	RB
cord-004862-yv76yvy5	18	22	to	to	TO
cord-004862-yv76yvy5	18	23	type	type	VB
cord-004862-yv76yvy5	18	24	II	II	NNP
cord-004862-yv76yvy5	18	25	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	18	26	keratin	keratin	NN
cord-004862-yv76yvy5	18	27	.	.	.
cord-004862-yv76yvy5	19	1	The	the	DT
cord-004862-yv76yvy5	19	2	repeated	repeat	VBN
cord-004862-yv76yvy5	19	3	DNA	dna	NN
cord-004862-yv76yvy5	19	4	sequences	sequence	NNS
cord-004862-yv76yvy5	19	5	that	that	WDT
cord-004862-yv76yvy5	19	6	are	be	VBP
cord-004862-yv76yvy5	19	7	dispersed	disperse	VBN
cord-004862-yv76yvy5	19	8	throughout	throughout	IN
cord-004862-yv76yvy5	19	9	eukaryotic	eukaryotic	JJ
cord-004862-yv76yvy5	19	10	genomes	genome	NNS
cord-004862-yv76yvy5	19	11	have	have	VBP
cord-004862-yv76yvy5	19	12	been	be	VBN
cord-004862-yv76yvy5	19	13	divided	divide	VBN
cord-004862-yv76yvy5	19	14	into	into	IN
cord-004862-yv76yvy5	19	15	two	two	CD
cord-004862-yv76yvy5	19	16	classes	class	NNS
cord-004862-yv76yvy5	19	17	(	(	-LRB-
cord-004862-yv76yvy5	19	18	reviewed	review	VBN
cord-004862-yv76yvy5	19	19	by	by	IN
cord-004862-yv76yvy5	19	20	Weiner	Weiner	NNP
cord-004862-yv76yvy5	19	21	et	et	NNP
cord-004862-yv76yvy5	19	22	al	al	NNP
cord-004862-yv76yvy5	19	23	.	.	NNP
cord-004862-yv76yvy5	19	24	1986	1986	CD
cord-004862-yv76yvy5	19	25	)	)	-RRB-
cord-004862-yv76yvy5	19	26	.	.	.
cord-004862-yv76yvy5	20	1	Both	both	DT
cord-004862-yv76yvy5	20	2	classes	class	NNS
cord-004862-yv76yvy5	20	3	appear	appear	VBP
cord-004862-yv76yvy5	20	4	to	to	TO
cord-004862-yv76yvy5	20	5	transpose	transpose	VB
cord-004862-yv76yvy5	20	6	by	by	IN
cord-004862-yv76yvy5	20	7	an	an	DT
cord-004862-yv76yvy5	20	8	RNA	RNA	NNP
cord-004862-yv76yvy5	20	9	intermediate	intermediate	NN
cord-004862-yv76yvy5	20	10	,	,	,
cord-004862-yv76yvy5	20	11	and	and	CC
cord-004862-yv76yvy5	20	12	the	the	DT
cord-004862-yv76yvy5	20	13	insertion	insertion	NN
cord-004862-yv76yvy5	20	14	of	of	IN
cord-004862-yv76yvy5	20	15	either	either	DT
cord-004862-yv76yvy5	20	16	class	class	NN
cord-004862-yv76yvy5	20	17	of	of	IN
cord-004862-yv76yvy5	20	18	repeated	repeat	VBN
cord-004862-yv76yvy5	20	19	DNA	dna	NN
cord-004862-yv76yvy5	20	20	generates	generate	VBZ
cord-004862-yv76yvy5	20	21	short	short	JJ
cord-004862-yv76yvy5	20	22	flanking	flank	VBG
cord-004862-yv76yvy5	20	23	direct	direct	JJ
cord-004862-yv76yvy5	20	24	repeats	repeat	NNS
cord-004862-yv76yvy5	20	25	at	at	IN
cord-004862-yv76yvy5	20	26	the	the	DT
cord-004862-yv76yvy5	20	27	target	target	NN
cord-004862-yv76yvy5	20	28	site	site	NN
cord-004862-yv76yvy5	20	29	--	--	:
cord-004862-yv76yvy5	20	30	hallmarks	hallmark	NNS
cord-004862-yv76yvy5	20	31	of	of	IN
cord-004862-yv76yvy5	20	32	transposition	transposition	NN
cord-004862-yv76yvy5	20	33	first	first	RB
cord-004862-yv76yvy5	20	34	recognized	recognize	VBN
cord-004862-yv76yvy5	20	35	in	in	IN
cord-004862-yv76yvy5	20	36	prokaryotes	prokaryote	NNS
cord-004862-yv76yvy5	20	37	.	.	.
cord-004862-yv76yvy5	21	1	One	one	CD
cord-004862-yv76yvy5	21	2	class	class	NN
cord-004862-yv76yvy5	21	3	of	of	IN
cord-004862-yv76yvy5	21	4	repeated	repeat	VBN
cord-004862-yv76yvy5	21	5	DNA	dna	NN
cord-004862-yv76yvy5	21	6	resembles	resemble	VBZ
cord-004862-yv76yvy5	21	7	retroviruses	retrovirus	NNS
cord-004862-yv76yvy5	21	8	in	in	IN
cord-004862-yv76yvy5	21	9	that	that	DT
cord-004862-yv76yvy5	21	10	members	member	NNS
cord-004862-yv76yvy5	21	11	of	of	IN
cord-004862-yv76yvy5	21	12	this	this	DT
cord-004862-yv76yvy5	21	13	class	class	NN
cord-004862-yv76yvy5	21	14	are	be	VBP
cord-004862-yv76yvy5	21	15	flanked	flank	VBN
cord-004862-yv76yvy5	21	16	by	by	IN
cord-004862-yv76yvy5	21	17	long	long	JJ
cord-004862-yv76yvy5	21	18	terminal	terminal	NN
cord-004862-yv76yvy5	21	19	repeats	repeat	NNS
cord-004862-yv76yvy5	21	20	(	(	-LRB-
cord-004862-yv76yvy5	21	21	Baltimore	Baltimore	NNP
cord-004862-yv76yvy5	21	22	1985	1985	CD
cord-004862-yv76yvy5	21	23	)	)	-RRB-
cord-004862-yv76yvy5	21	24	.	.	.
cord-004862-yv76yvy5	22	1	This	this	DT
cord-004862-yv76yvy5	22	2	class	class	NN
cord-004862-yv76yvy5	22	3	includes	include	VBZ
cord-004862-yv76yvy5	22	4	the	the	DT
cord-004862-yv76yvy5	22	5	yeast	yeast	NN
cord-004862-yv76yvy5	22	6	Ty-1	Ty-1	NNP
cord-004862-yv76yvy5	22	7	repeat	repeat	VBP
cord-004862-yv76yvy5	22	8	,	,	,
cord-004862-yv76yvy5	22	9	the	the	DT
cord-004862-yv76yvy5	22	10	Drosophila	Drosophila	NNP
cord-004862-yv76yvy5	22	11	copia	copia	NN
cord-004862-yv76yvy5	22	12	repeat	repeat	NN
cord-004862-yv76yvy5	22	13	,	,	,
cord-004862-yv76yvy5	22	14	and	and	CC
cord-004862-yv76yvy5	22	15	the	the	DT
cord-004862-yv76yvy5	22	16	human	human	JJ
cord-004862-yv76yvy5	22	17	THE1	THE1	NNP
cord-004862-yv76yvy5	22	18	repeat	repeat	NN
cord-004862-yv76yvy5	22	19	(	(	-LRB-
cord-004862-yv76yvy5	22	20	Paulson	Paulson	NNP
cord-004862-yv76yvy5	22	21	et	et	NNP
cord-004862-yv76yvy5	22	22	al	al	NNP
cord-004862-yv76yvy5	22	23	.	.	.
cord-004862-yv76yvy5	22	24	1985	1985	CD
cord-004862-yv76yvy5	22	25	)	)	-RRB-
cord-004862-yv76yvy5	22	26	.	.	.
cord-004862-yv76yvy5	23	1	Another	another	DT
cord-004862-yv76yvy5	23	2	class	class	NN
cord-004862-yv76yvy5	23	3	of	of	IN
cord-004862-yv76yvy5	23	4	repeated	repeat	VBN
cord-004862-yv76yvy5	23	5	sequences	sequence	NNS
cord-004862-yv76yvy5	23	6	resembles	resemble	VBZ
cord-004862-yv76yvy5	23	7	processed	process	VBN
cord-004862-yv76yvy5	23	8	pseudogenes	pseudogene	NNS
cord-004862-yv76yvy5	23	9	and	and	CC
cord-004862-yv76yvy5	23	10	lacks	lack	VBZ
cord-004862-yv76yvy5	23	11	long	long	JJ
cord-004862-yv76yvy5	23	12	terminal	terminal	NN
cord-004862-yv76yvy5	23	13	repeats	repeat	NNS
cord-004862-yv76yvy5	23	14	(	(	-LRB-
cord-004862-yv76yvy5	23	15	LTRs	LTRs	NNP
cord-004862-yv76yvy5	23	16	)	)	-RRB-
cord-004862-yv76yvy5	23	17	.	.	.
cord-004862-yv76yvy5	24	1	This	this	DT
cord-004862-yv76yvy5	24	2	second	second	JJ
cord-004862-yv76yvy5	24	3	class	class	NN
cord-004862-yv76yvy5	24	4	of	of	IN
cord-004862-yv76yvy5	24	5	repeats	repeat	NNS
cord-004862-yv76yvy5	24	6	has	have	VBZ
cord-004862-yv76yvy5	24	7	been	be	VBN
cord-004862-yv76yvy5	24	8	termed	term	VBN
cord-004862-yv76yvy5	24	9	retroposons	retroposon	NNS
cord-004862-yv76yvy5	24	10	(	(	-LRB-
cord-004862-yv76yvy5	24	11	Rogers	Rogers	NNP
cord-004862-yv76yvy5	24	12	1983	1983	CD
cord-004862-yv76yvy5	24	13	)	)	-RRB-
cord-004862-yv76yvy5	24	14	,	,	,
cord-004862-yv76yvy5	24	15	nonviral	nonviral	JJ
cord-004862-yv76yvy5	24	16	retroposons	retroposon	NNS
cord-004862-yv76yvy5	24	17	(	(	-LRB-
cord-004862-yv76yvy5	24	18	Weiner	Weiner	NNP
cord-004862-yv76yvy5	24	19	et	et	NNP
cord-004862-yv76yvy5	24	20	al	al	NNP
cord-004862-yv76yvy5	24	21	.	.	NNP
cord-004862-yv76yvy5	24	22	1986	1986	CD
cord-004862-yv76yvy5	24	23	)	)	-RRB-
cord-004862-yv76yvy5	24	24	,	,	,
cord-004862-yv76yvy5	24	25	and	and	CC
cord-004862-yv76yvy5	24	26	non	non	JJ
cord-004862-yv76yvy5	24	27	-	-	JJ
cord-004862-yv76yvy5	24	28	LTR	ltr	JJ
cord-004862-yv76yvy5	24	29	retrotransposons	retrotransposon	NNS
cord-004862-yv76yvy5	24	30	(	(	-LRB-
cord-004862-yv76yvy5	24	31	Xiong	Xiong	NNP
cord-004862-yv76yvy5	24	32	and	and	CC
cord-004862-yv76yvy5	24	33	Eickbush	Eickbush	NNP
cord-004862-yv76yvy5	24	34	1988	1988	CD
cord-004862-yv76yvy5	24	35	)	)	-RRB-
cord-004862-yv76yvy5	24	36	.	.	.
cord-004862-yv76yvy5	25	1	In	in	IN
cord-004862-yv76yvy5	25	2	this	this	DT
cord-004862-yv76yvy5	25	3	paper	paper	NN
cord-004862-yv76yvy5	25	4	,	,	,
cord-004862-yv76yvy5	25	5	this	this	DT
cord-004862-yv76yvy5	25	6	second	second	JJ
cord-004862-yv76yvy5	25	7	class	class	NN
cord-004862-yv76yvy5	25	8	of	of	IN
cord-004862-yv76yvy5	25	9	RNAtransposed	RNAtransposed	NNP
cord-004862-yv76yvy5	25	10	repeats	repeat	NNS
cord-004862-yv76yvy5	25	11	will	will	MD
cord-004862-yv76yvy5	25	12	be	be	VB
cord-004862-yv76yvy5	25	13	called	call	VBN
cord-004862-yv76yvy5	25	14	retroposons	retroposon	NNS
cord-004862-yv76yvy5	25	15	.	.	.
cord-004862-yv76yvy5	26	1	Two	two	CD
cord-004862-yv76yvy5	26	2	groups	group	NNS
cord-004862-yv76yvy5	26	3	of	of	IN
cord-004862-yv76yvy5	26	4	retroposons	retroposon	NNS
cord-004862-yv76yvy5	26	5	have	have	VBP
cord-004862-yv76yvy5	26	6	been	be	VBN
cord-004862-yv76yvy5	26	7	identified	identify	VBN
cord-004862-yv76yvy5	26	8	based	base	VBN
cord-004862-yv76yvy5	26	9	on	on	IN
cord-004862-yv76yvy5	26	10	their	-PRON-	PRP$
cord-004862-yv76yvy5	26	11	length	length	NN
cord-004862-yv76yvy5	26	12	:	:	:
cord-004862-yv76yvy5	26	13	the	the	DT
cord-004862-yv76yvy5	26	14	short	short	JJ
cord-004862-yv76yvy5	26	15	interspersed	intersperse	VBN
cord-004862-yv76yvy5	26	16	repeats	repeat	VBZ
cord-004862-yv76yvy5	26	17	,	,	,
cord-004862-yv76yvy5	26	18	or	or	CC
cord-004862-yv76yvy5	26	19	SINEs	sine	NNS
cord-004862-yv76yvy5	26	20	,	,	,
cord-004862-yv76yvy5	26	21	that	that	WDT
cord-004862-yv76yvy5	26	22	are	be	VBP
cord-004862-yv76yvy5	26	23	tess	tess	NNP
cord-004862-yv76yvy5	26	24	than	than	IN
cord-004862-yv76yvy5	26	25	500	500	CD
cord-004862-yv76yvy5	26	26	bp	bp	NNP
cord-004862-yv76yvy5	26	27	long	long	NNP
cord-004862-yv76yvy5	26	28	,	,	,
cord-004862-yv76yvy5	26	29	and	and	CC
cord-004862-yv76yvy5	26	30	the	the	DT
cord-004862-yv76yvy5	26	31	long	long	JJ
cord-004862-yv76yvy5	26	32	inter-	inter-	XX
cord-004862-yv76yvy5	26	33	Repetitive	repetitive	JJ
cord-004862-yv76yvy5	26	34	DNA	dna	NN
cord-004862-yv76yvy5	26	35	in	in	IN
cord-004862-yv76yvy5	26	36	the	the	DT
cord-004862-yv76yvy5	26	37	rabbit/3-like	rabbit/3-like	JJ
cord-004862-yv76yvy5	26	38	globin	globin	NN
cord-004862-yv76yvy5	26	39	gene	gene	NN
cord-004862-yv76yvy5	26	40	cluster	cluster	NN
cord-004862-yv76yvy5	26	41	.	.	.
cord-004862-yv76yvy5	27	1	The	the	DT
cord-004862-yv76yvy5	27	2	0-like	0-like	CD
cord-004862-yv76yvy5	27	3	globin	globin	NN
cord-004862-yv76yvy5	27	4	genes	gene	NNS
cord-004862-yv76yvy5	27	5	~	~	NFP
cord-004862-yv76yvy5	27	6	,	,	,
cord-004862-yv76yvy5	27	7	7	7	CD
cord-004862-yv76yvy5	27	8	,	,	,
cord-004862-yv76yvy5	27	9	6	6	CD
cord-004862-yv76yvy5	27	10	,	,	,
cord-004862-yv76yvy5	27	11	and/3	and/3	NNP
cord-004862-yv76yvy5	27	12	are	be	VBP
cord-004862-yv76yvy5	27	13	shown	show	VBN
cord-004862-yv76yvy5	27	14	as	as	IN
cord-004862-yv76yvy5	27	15	boxes	box	NNS
cord-004862-yv76yvy5	27	16	along	along	IN
cord-004862-yv76yvy5	27	17	the	the	DT
cord-004862-yv76yvy5	27	18	45-kb	45-kb	CD
cord-004862-yv76yvy5	27	19	segment	segment	NN
cord-004862-yv76yvy5	27	20	of	of	IN
cord-004862-yv76yvy5	27	21	cloned	clone	VBN
cord-004862-yv76yvy5	27	22	DNA	dna	NN
cord-004862-yv76yvy5	27	23	(	(	-LRB-
cord-004862-yv76yvy5	27	24	Lacy	Lacy	NNP
cord-004862-yv76yvy5	27	25	et	et	FW
cord-004862-yv76yvy5	27	26	al	al	NNP
cord-004862-yv76yvy5	27	27	.	.	.
cord-004862-yv76yvy5	27	28	1979	1979	CD
cord-004862-yv76yvy5	27	29	)	)	-RRB-
cord-004862-yv76yvy5	27	30	.	.	.
cord-004862-yv76yvy5	28	1	Transcription	transcription	NN
cord-004862-yv76yvy5	28	2	of	of	IN
cord-004862-yv76yvy5	28	3	the	the	DT
cord-004862-yv76yvy5	28	4	active	active	JJ
cord-004862-yv76yvy5	28	5	genes	gene	NNS
cord-004862-yv76yvy5	28	6	is	be	VBZ
cord-004862-yv76yvy5	28	7	from	from	IN
cord-004862-yv76yvy5	28	8	left	leave	VBN
cord-004862-yv76yvy5	28	9	to	to	IN
cord-004862-yv76yvy5	28	10	right	right	NN
cord-004862-yv76yvy5	28	11	.	.	.
cord-004862-yv76yvy5	29	1	The	the	DT
cord-004862-yv76yvy5	29	2	location	location	NN
cord-004862-yv76yvy5	29	3	and	and	CC
cord-004862-yv76yvy5	29	4	orientation	orientation	NN
cord-004862-yv76yvy5	29	5	of	of	IN
cord-004862-yv76yvy5	29	6	L1	L1	NNP
cord-004862-yv76yvy5	29	7	repeats	repeat	NNS
cord-004862-yv76yvy5	29	8	are	be	VBP
cord-004862-yv76yvy5	29	9	shown	show	VBN
cord-004862-yv76yvy5	29	10	by	by	IN
cord-004862-yv76yvy5	29	11	the	the	DT
cord-004862-yv76yvy5	29	12	filled	fill	VBN
cord-004862-yv76yvy5	29	13	arrows	arrow	NNS
cord-004862-yv76yvy5	29	14	.	.	.
cord-004862-yv76yvy5	30	1	The	the	DT
cord-004862-yv76yvy5	30	2	L1	L1	NNP
cord-004862-yv76yvy5	30	3	repeats	repeat	NNS
cord-004862-yv76yvy5	30	4	are	be	VBP
cord-004862-yv76yvy5	30	5	named	name	VBN
cord-004862-yv76yvy5	30	6	LIOcl	LIOcl	NNP
cord-004862-yv76yvy5	30	7	-	-	HYPH
cord-004862-yv76yvy5	30	8	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	30	9	(	(	-LRB-
cord-004862-yv76yvy5	30	10	Demers	Demers	NNP
cord-004862-yv76yvy5	30	11	et	et	FW
cord-004862-yv76yvy5	30	12	al	al	NNP
cord-004862-yv76yvy5	30	13	.	.	NNP
cord-004862-yv76yvy5	30	14	1986	1986	CD
cord-004862-yv76yvy5	30	15	)	)	-RRB-
cord-004862-yv76yvy5	30	16	.	.	.
cord-004862-yv76yvy5	31	1	The	the	DT
cord-004862-yv76yvy5	31	2	location	location	NN
cord-004862-yv76yvy5	31	3	and	and	CC
cord-004862-yv76yvy5	31	4	orientation	orientation	NN
cord-004862-yv76yvy5	31	5	of	of	IN
cord-004862-yv76yvy5	31	6	C	C	NNP
cord-004862-yv76yvy5	31	7	repeats	repeat	VBZ
cord-004862-yv76yvy5	31	8	,	,	,
cord-004862-yv76yvy5	31	9	a	a	DT
cord-004862-yv76yvy5	31	10	rabbit	rabbit	NN
cord-004862-yv76yvy5	31	11	SINE	sine	NN
cord-004862-yv76yvy5	31	12	,	,	,
cord-004862-yv76yvy5	31	13	are	be	VBP
cord-004862-yv76yvy5	31	14	shown	show	VBN
cord-004862-yv76yvy5	31	15	by	by	IN
cord-004862-yv76yvy5	31	16	the	the	DT
cord-004862-yv76yvy5	31	17	open	open	JJ
cord-004862-yv76yvy5	31	18	arrows	arrow	NNS
cord-004862-yv76yvy5	31	19	.	.	.
cord-004862-yv76yvy5	32	1	spersed	spersed	NNP
cord-004862-yv76yvy5	32	2	repeats	repeat	VBZ
cord-004862-yv76yvy5	32	3	,	,	,
cord-004862-yv76yvy5	32	4	or	or	CC
cord-004862-yv76yvy5	32	5	LINEs	line	NNS
cord-004862-yv76yvy5	32	6	,	,	,
cord-004862-yv76yvy5	33	1	that	that	WDT
cord-004862-yv76yvy5	33	2	are	be	VBP
cord-004862-yv76yvy5	33	3	greater	great	JJR
cord-004862-yv76yvy5	33	4	than	than	IN
cord-004862-yv76yvy5	33	5	6000	6000	CD
cord-004862-yv76yvy5	33	6	bp	bp	NNP
cord-004862-yv76yvy5	33	7	long	long	NNP
cord-004862-yv76yvy5	33	8	(	(	-LRB-
cord-004862-yv76yvy5	33	9	Singer	singer	NN
cord-004862-yv76yvy5	33	10	1982	1982	CD
cord-004862-yv76yvy5	33	11	)	)	-RRB-
cord-004862-yv76yvy5	33	12	.	.	.
cord-004862-yv76yvy5	34	1	Although	although	IN
cord-004862-yv76yvy5	34	2	no	no	DT
cord-004862-yv76yvy5	34	3	precise	precise	JJ
cord-004862-yv76yvy5	34	4	sequence	sequence	NN
cord-004862-yv76yvy5	34	5	specificity	specificity	NN
cord-004862-yv76yvy5	34	6	has	have	VBZ
cord-004862-yv76yvy5	34	7	been	be	VBN
cord-004862-yv76yvy5	34	8	observed	observe	VBN
cord-004862-yv76yvy5	34	9	at	at	IN
cord-004862-yv76yvy5	34	10	the	the	DT
cord-004862-yv76yvy5	34	11	insertion	insertion	NN
cord-004862-yv76yvy5	34	12	sites	site	NNS
cord-004862-yv76yvy5	34	13	,	,	,
cord-004862-yv76yvy5	34	14	SINEs	sine	NNS
cord-004862-yv76yvy5	34	15	and	and	CC
cord-004862-yv76yvy5	34	16	LINEs	line	NNS
cord-004862-yv76yvy5	34	17	do	do	VBP
cord-004862-yv76yvy5	34	18	have	have	VB
cord-004862-yv76yvy5	34	19	a	a	DT
cord-004862-yv76yvy5	34	20	regional	regional	JJ
cord-004862-yv76yvy5	34	21	preference	preference	NN
cord-004862-yv76yvy5	34	22	for	for	IN
cord-004862-yv76yvy5	34	23	integration	integration	NN
cord-004862-yv76yvy5	34	24	in	in	IN
cord-004862-yv76yvy5	34	25	the	the	DT
cord-004862-yv76yvy5	34	26	human	human	JJ
cord-004862-yv76yvy5	34	27	genome	genome	NN
cord-004862-yv76yvy5	34	28	,	,	,
cord-004862-yv76yvy5	34	29	as	as	IN
cord-004862-yv76yvy5	34	30	shown	show	VBN
cord-004862-yv76yvy5	34	31	by	by	IN
cord-004862-yv76yvy5	34	32	the	the	DT
cord-004862-yv76yvy5	34	33	enrichment	enrichment	NN
cord-004862-yv76yvy5	34	34	of	of	IN
cord-004862-yv76yvy5	34	35	different	different	JJ
cord-004862-yv76yvy5	34	36	chromosome	chromosome	NN
cord-004862-yv76yvy5	34	37	bands	band	NNS
cord-004862-yv76yvy5	34	38	for	for	IN
cord-004862-yv76yvy5	34	39	either	either	CC
cord-004862-yv76yvy5	34	40	LINEs	line	NNS
cord-004862-yv76yvy5	34	41	or	or	CC
cord-004862-yv76yvy5	34	42	SINEs	sine	NNS
cord-004862-yv76yvy5	34	43	(	(	-LRB-
cord-004862-yv76yvy5	34	44	Korenberg	Korenberg	NNP
cord-004862-yv76yvy5	34	45	and	and	CC
cord-004862-yv76yvy5	34	46	Rykowski	Rykowski	NNP
cord-004862-yv76yvy5	34	47	1988	1988	CD
cord-004862-yv76yvy5	34	48	)	)	-RRB-
cord-004862-yv76yvy5	34	49	.	.	.
cord-004862-yv76yvy5	35	1	Although	although	IN
cord-004862-yv76yvy5	35	2	several	several	JJ
cord-004862-yv76yvy5	35	3	different	different	JJ
cord-004862-yv76yvy5	35	4	sequences	sequence	NNS
cord-004862-yv76yvy5	35	5	have	have	VBP
cord-004862-yv76yvy5	35	6	been	be	VBN
cord-004862-yv76yvy5	35	7	dispersed	disperse	VBN
cord-004862-yv76yvy5	35	8	as	as	IN
cord-004862-yv76yvy5	35	9	SINEs	sine	NNS
cord-004862-yv76yvy5	35	10	in	in	IN
cord-004862-yv76yvy5	35	11	mammals	mammal	NNS
cord-004862-yv76yvy5	35	12	(	(	-LRB-
cord-004862-yv76yvy5	35	13	reviewed	review	VBN
cord-004862-yv76yvy5	35	14	in	in	IN
cord-004862-yv76yvy5	35	15	Weiner	Weiner	NNP
cord-004862-yv76yvy5	35	16	et	et	NNP
cord-004862-yv76yvy5	35	17	al	al	NNP
cord-004862-yv76yvy5	35	18	.	.	NNP
cord-004862-yv76yvy5	35	19	1986	1986	CD
cord-004862-yv76yvy5	35	20	)	)	-RRB-
cord-004862-yv76yvy5	35	21	,	,	,
cord-004862-yv76yvy5	35	22	only	only	RB
cord-004862-yv76yvy5	35	23	one	one	CD
cord-004862-yv76yvy5	35	24	sequence	sequence	NN
cord-004862-yv76yvy5	35	25	element	element	NN
cord-004862-yv76yvy5	35	26	,	,	,
cord-004862-yv76yvy5	35	27	called	call	VBN
cord-004862-yv76yvy5	35	28	L1	L1	NNP
cord-004862-yv76yvy5	35	29	,	,	,
cord-004862-yv76yvy5	35	30	has	have	VBZ
cord-004862-yv76yvy5	35	31	been	be	VBN
cord-004862-yv76yvy5	35	32	found	find	VBN
cord-004862-yv76yvy5	35	33	to	to	TO
cord-004862-yv76yvy5	35	34	be	be	VB
cord-004862-yv76yvy5	35	35	dispersed	disperse	VBN
cord-004862-yv76yvy5	35	36	as	as	IN
cord-004862-yv76yvy5	35	37	a	a	DT
cord-004862-yv76yvy5	35	38	LINE	line	NN
cord-004862-yv76yvy5	35	39	in	in	IN
cord-004862-yv76yvy5	35	40	mammals	mammal	NNS
cord-004862-yv76yvy5	35	41	(	(	-LRB-
cord-004862-yv76yvy5	35	42	reviewed	review	VBN
cord-004862-yv76yvy5	35	43	in	in	IN
cord-004862-yv76yvy5	35	44	Singer	Singer	NNP
cord-004862-yv76yvy5	35	45	and	and	CC
cord-004862-yv76yvy5	35	46	Skowronski	Skowronski	NNP
cord-004862-yv76yvy5	35	47	1985	1985	CD
cord-004862-yv76yvy5	35	48	)	)	-RRB-
cord-004862-yv76yvy5	35	49	.	.	.
cord-004862-yv76yvy5	36	1	The	the	DT
cord-004862-yv76yvy5	36	2	L1	L1	NNP
cord-004862-yv76yvy5	36	3	sequence	sequence	NN
cord-004862-yv76yvy5	36	4	has	have	VBZ
cord-004862-yv76yvy5	36	5	been	be	VBN
cord-004862-yv76yvy5	36	6	identified	identify	VBN
cord-004862-yv76yvy5	36	7	in	in	IN
cord-004862-yv76yvy5	36	8	a	a	DT
cord-004862-yv76yvy5	36	9	wide	wide	JJ
cord-004862-yv76yvy5	36	10	variety	variety	NN
cord-004862-yv76yvy5	36	11	of	of	IN
cord-004862-yv76yvy5	36	12	species	specie	NNS
cord-004862-yv76yvy5	36	13	including	include	VBG
cord-004862-yv76yvy5	36	14	primates	primate	NNS
cord-004862-yv76yvy5	36	15	(	(	-LRB-
cord-004862-yv76yvy5	36	16	Lerman	Lerman	NNP
cord-004862-yv76yvy5	36	17	et	et	NNP
cord-004862-yv76yvy5	36	18	al	al	NNP
cord-004862-yv76yvy5	36	19	.	.	.
cord-004862-yv76yvy5	36	20	1983	1983	CD
cord-004862-yv76yvy5	36	21	)	)	-RRB-
cord-004862-yv76yvy5	36	22	,	,	,
cord-004862-yv76yvy5	36	23	mice	mouse	NNS
cord-004862-yv76yvy5	36	24	(	(	-LRB-
cord-004862-yv76yvy5	36	25	Brown	Brown	NNP
cord-004862-yv76yvy5	36	26	and	and	CC
cord-004862-yv76yvy5	36	27	Dover	Dover	NNP
cord-004862-yv76yvy5	36	28	1981	1981	CD
cord-004862-yv76yvy5	36	29	;	;	:
cord-004862-yv76yvy5	36	30	Fanning	Fanning	NNP
cord-004862-yv76yvy5	36	31	1982	1982	CD
cord-004862-yv76yvy5	36	32	)	)	-RRB-
cord-004862-yv76yvy5	36	33	,	,	,
cord-004862-yv76yvy5	36	34	rats	rat	NNS
cord-004862-yv76yvy5	36	35	(	(	-LRB-
cord-004862-yv76yvy5	36	36	Econonmou	Econonmou	NNP
cord-004862-yv76yvy5	36	37	-	-	HYPH
cord-004862-yv76yvy5	36	38	Pachnis	Pachnis	NNP
cord-004862-yv76yvy5	36	39	et	et	NNP
cord-004862-yv76yvy5	36	40	al	al	NNP
cord-004862-yv76yvy5	36	41	.	.	.
cord-004862-yv76yvy5	36	42	1985	1985	CD
cord-004862-yv76yvy5	36	43	;	;	:
cord-004862-yv76yvy5	36	44	Soares	Soares	NNP
cord-004862-yv76yvy5	36	45	et	et	NNP
cord-004862-yv76yvy5	36	46	al	al	NNP
cord-004862-yv76yvy5	36	47	.	.	.
cord-004862-yv76yvy5	37	1	1985	1985	CD
cord-004862-yv76yvy5	37	2	;	;	:
cord-004862-yv76yvy5	37	3	D'Ambrosio	D'Ambrosio	NNP
cord-004862-yv76yvy5	37	4	et	et	NNP
cord-004862-yv76yvy5	37	5	al	al	NNP
cord-004862-yv76yvy5	37	6	.	.	NNP
cord-004862-yv76yvy5	37	7	1986	1986	CD
cord-004862-yv76yvy5	37	8	)	)	-RRB-
cord-004862-yv76yvy5	37	9	,	,	,
cord-004862-yv76yvy5	37	10	dogs	dog	NNS
cord-004862-yv76yvy5	37	11	(	(	-LRB-
cord-004862-yv76yvy5	37	12	Katzir	Katzir	NNP
cord-004862-yv76yvy5	37	13	et	et	FW
cord-004862-yv76yvy5	37	14	al	al	NNP
cord-004862-yv76yvy5	37	15	.	.	.
cord-004862-yv76yvy5	37	16	1985	1985	CD
cord-004862-yv76yvy5	37	17	)	)	-RRB-
cord-004862-yv76yvy5	37	18	,	,	,
cord-004862-yv76yvy5	37	19	eats	eat	VBZ
cord-004862-yv76yvy5	37	20	(	(	-LRB-
cord-004862-yv76yvy5	37	21	Fanning	Fanning	NNP
cord-004862-yv76yvy5	37	22	and	and	CC
cord-004862-yv76yvy5	37	23	Singer	Singer	NNP
cord-004862-yv76yvy5	37	24	1987	1987	CD
cord-004862-yv76yvy5	37	25	)	)	-RRB-
cord-004862-yv76yvy5	37	26	,	,	,
cord-004862-yv76yvy5	37	27	and	and	CC
cord-004862-yv76yvy5	37	28	rabbits	rabbit	NNS
cord-004862-yv76yvy5	37	29	(	(	-LRB-
cord-004862-yv76yvy5	37	30	Demers	Demers	NNP
cord-004862-yv76yvy5	37	31	et	et	FW
cord-004862-yv76yvy5	37	32	al	al	NNP
cord-004862-yv76yvy5	37	33	.	.	NNP
cord-004862-yv76yvy5	37	34	1986	1986	CD
cord-004862-yv76yvy5	37	35	)	)	-RRB-
cord-004862-yv76yvy5	37	36	.	.	.
cord-004862-yv76yvy5	38	1	Genomic	genomic	JJ
cord-004862-yv76yvy5	38	2	blot	blot	NN
cord-004862-yv76yvy5	38	3	-	-	HYPH
cord-004862-yv76yvy5	38	4	hybridization	hybridization	NN
cord-004862-yv76yvy5	38	5	analysis	analysis	NN
cord-004862-yv76yvy5	38	6	indicates	indicate	VBZ
cord-004862-yv76yvy5	38	7	that	that	IN
cord-004862-yv76yvy5	38	8	the	the	DT
cord-004862-yv76yvy5	38	9	L1	L1	NNP
cord-004862-yv76yvy5	38	10	sequence	sequence	NN
cord-004862-yv76yvy5	38	11	is	be	VBZ
cord-004862-yv76yvy5	38	12	present	present	JJ
cord-004862-yv76yvy5	38	13	in	in	IN
cord-004862-yv76yvy5	38	14	all	all	DT
cord-004862-yv76yvy5	38	15	mammalian	mammalian	JJ
cord-004862-yv76yvy5	38	16	species	specie	NNS
cord-004862-yv76yvy5	38	17	at	at	IN
cord-004862-yv76yvy5	38	18	a	a	DT
cord-004862-yv76yvy5	38	19	frequency	frequency	NN
cord-004862-yv76yvy5	38	20	of	of	IN
cord-004862-yv76yvy5	38	21	about	about	IN
cord-004862-yv76yvy5	38	22	104	104	CD
cord-004862-yv76yvy5	38	23	-	-	SYM
cord-004862-yv76yvy5	38	24	105	105	CD
cord-004862-yv76yvy5	38	25	copies	copy	NNS
cord-004862-yv76yvy5	38	26	per	per	IN
cord-004862-yv76yvy5	38	27	haploid	haploid	JJ
cord-004862-yv76yvy5	38	28	genome	genome	NN
cord-004862-yv76yvy5	38	29	(	(	-LRB-
cord-004862-yv76yvy5	38	30	Burton	Burton	NNP
cord-004862-yv76yvy5	38	31	et	et	NNP
cord-004862-yv76yvy5	38	32	al	al	NNP
cord-004862-yv76yvy5	38	33	.	.	NNP
cord-004862-yv76yvy5	38	34	1986	1986	CD
cord-004862-yv76yvy5	38	35	)	)	-RRB-
cord-004862-yv76yvy5	38	36	.	.	.
cord-004862-yv76yvy5	39	1	Although	although	IN
cord-004862-yv76yvy5	39	2	the	the	DT
cord-004862-yv76yvy5	39	3	parent	parent	NN
cord-004862-yv76yvy5	39	4	genes	gene	NNS
cord-004862-yv76yvy5	39	5	of	of	IN
cord-004862-yv76yvy5	39	6	SINEs	sine	NNS
cord-004862-yv76yvy5	39	7	are	be	VBP
cord-004862-yv76yvy5	39	8	transcribed	transcribe	VBN
cord-004862-yv76yvy5	39	9	by	by	IN
cord-004862-yv76yvy5	39	10	RNA	RNA	NNP
cord-004862-yv76yvy5	39	11	polymerase	polymerase	NN
cord-004862-yv76yvy5	39	12	III	III	NNP
cord-004862-yv76yvy5	39	13	,	,	,
cord-004862-yv76yvy5	39	14	the	the	DT
cord-004862-yv76yvy5	39	15	L1	L1	NNP
cord-004862-yv76yvy5	39	16	repeats	repeat	VBZ
cord-004862-yv76yvy5	39	17	appear	appear	VBP
cord-004862-yv76yvy5	39	18	to	to	TO
cord-004862-yv76yvy5	39	19	be	be	VB
cord-004862-yv76yvy5	39	20	derived	derive	VBN
cord-004862-yv76yvy5	39	21	from	from	IN
cord-004862-yv76yvy5	39	22	an	an	DT
cord-004862-yv76yvy5	39	23	RNA	RNA	NNP
cord-004862-yv76yvy5	39	24	polymerase	polymerase	NN
cord-004862-yv76yvy5	39	25	II	II	NNP
cord-004862-yv76yvy5	39	26	transcript	transcript	NN
cord-004862-yv76yvy5	39	27	.	.	.
cord-004862-yv76yvy5	40	1	The	the	DT
cord-004862-yv76yvy5	40	2	parent	parent	NN
cord-004862-yv76yvy5	40	3	gene	gene	NN
cord-004862-yv76yvy5	40	4	of	of	IN
cord-004862-yv76yvy5	40	5	L1	L1	NNP
cord-004862-yv76yvy5	40	6	is	be	VBZ
cord-004862-yv76yvy5	40	7	proposed	propose	VBN
cord-004862-yv76yvy5	40	8	to	to	TO
cord-004862-yv76yvy5	40	9	be	be	VB
cord-004862-yv76yvy5	40	10	a	a	DT
cord-004862-yv76yvy5	40	11	protein	protein	NN
cord-004862-yv76yvy5	40	12	-	-	HYPH
cord-004862-yv76yvy5	40	13	coding	code	VBG
cord-004862-yv76yvy5	40	14	gene	gene	NN
cord-004862-yv76yvy5	40	15	(	(	-LRB-
cord-004862-yv76yvy5	40	16	reviewed	review	VBN
cord-004862-yv76yvy5	40	17	in	in	IN
cord-004862-yv76yvy5	40	18	Singer	Singer	NNP
cord-004862-yv76yvy5	40	19	and	and	CC
cord-004862-yv76yvy5	40	20	Skowronski	Skowronski	NNP
cord-004862-yv76yvy5	40	21	1985	1985	CD
cord-004862-yv76yvy5	40	22	)	)	-RRB-
cord-004862-yv76yvy5	40	23	.	.	.
cord-004862-yv76yvy5	41	1	Long	long	RB
cord-004862-yv76yvy5	41	2	open	open	JJ
cord-004862-yv76yvy5	41	3	reading	reading	NN
cord-004862-yv76yvy5	41	4	frames	frame	NNS
cord-004862-yv76yvy5	41	5	(	(	-LRB-
cord-004862-yv76yvy5	41	6	ORFs	ORFs	NNP
cord-004862-yv76yvy5	41	7	)	)	-RRB-
cord-004862-yv76yvy5	41	8	are	be	VBP
cord-004862-yv76yvy5	41	9	found	find	VBN
cord-004862-yv76yvy5	41	10	in	in	IN
cord-004862-yv76yvy5	41	11	the	the	DT
cord-004862-yv76yvy5	41	12	L1	L1	NNP
cord-004862-yv76yvy5	41	13	sequences	sequence	NNS
cord-004862-yv76yvy5	41	14	(	(	-LRB-
cord-004862-yv76yvy5	41	15	Manuelidis	Manuelidis	NNP
cord-004862-yv76yvy5	41	16	1982	1982	CD
cord-004862-yv76yvy5	41	17	;	;	:
cord-004862-yv76yvy5	41	18	Martin	Martin	NNP
cord-004862-yv76yvy5	41	19	et	et	NNP
cord-004862-yv76yvy5	41	20	al	al	NNP
cord-004862-yv76yvy5	41	21	.	.	.
cord-004862-yv76yvy5	41	22	1984	1984	CD
cord-004862-yv76yvy5	41	23	;	;	:
cord-004862-yv76yvy5	41	24	Potter	Potter	NNP
cord-004862-yv76yvy5	41	25	1984	1984	CD
cord-004862-yv76yvy5	41	26	)	)	-RRB-
cord-004862-yv76yvy5	41	27	,	,	,
cord-004862-yv76yvy5	41	28	and	and	CC
cord-004862-yv76yvy5	41	29	sequenced	sequence	VBN
cord-004862-yv76yvy5	41	30	members	member	NNS
cord-004862-yv76yvy5	41	31	from	from	IN
cord-004862-yv76yvy5	41	32	the	the	DT
cord-004862-yv76yvy5	41	33	mouse	mouse	NN
cord-004862-yv76yvy5	41	34	genome	genome	NN
cord-004862-yv76yvy5	41	35	have	have	VBP
cord-004862-yv76yvy5	41	36	two	two	CD
cord-004862-yv76yvy5	41	37	overlapping	overlap	VBG
cord-004862-yv76yvy5	41	38	ORFs	orf	NNS
cord-004862-yv76yvy5	41	39	of	of	IN
cord-004862-yv76yvy5	41	40	1137	1137	CD
cord-004862-yv76yvy5	41	41	bp	bp	NNP
cord-004862-yv76yvy5	41	42	(	(	-LRB-
cord-004862-yv76yvy5	41	43	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	41	44	)	)	-RRB-
cord-004862-yv76yvy5	41	45	and	and	CC
cord-004862-yv76yvy5	41	46	3900	3900	CD
cord-004862-yv76yvy5	41	47	bp	bp	NNP
cord-004862-yv76yvy5	41	48	(	(	-LRB-
cord-004862-yv76yvy5	41	49	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	41	50	)	)	-RRB-
cord-004862-yv76yvy5	42	1	Shehee	Shehee	NNP
cord-004862-yv76yvy5	42	2	et	et	NNP
cord-004862-yv76yvy5	42	3	al	al	NNP
cord-004862-yv76yvy5	42	4	.	.	NNP
cord-004862-yv76yvy5	42	5	1987	1987	CD
cord-004862-yv76yvy5	42	6	)	)	-RRB-
cord-004862-yv76yvy5	42	7	.	.	.
cord-004862-yv76yvy5	43	1	The	the	DT
cord-004862-yv76yvy5	43	2	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	43	3	regions	region	NNS
cord-004862-yv76yvy5	43	4	of	of	IN
cord-004862-yv76yvy5	43	5	primate	primate	NN
cord-004862-yv76yvy5	43	6	and	and	CC
cord-004862-yv76yvy5	43	7	rabbit	rabbit	NN
cord-004862-yv76yvy5	43	8	LI	LI	NNP
cord-004862-yv76yvy5	43	9	are	be	VBP
cord-004862-yv76yvy5	43	10	65	65	CD
cord-004862-yv76yvy5	43	11	%	%	NN
cord-004862-yv76yvy5	43	12	similar	similar	JJ
cord-004862-yv76yvy5	43	13	,	,	,
cord-004862-yv76yvy5	43	14	but	but	CC
cord-004862-yv76yvy5	43	15	the	the	DT
cord-004862-yv76yvy5	43	16	similarity	similarity	NN
cord-004862-yv76yvy5	43	17	ends	end	VBZ
cord-004862-yv76yvy5	43	18	abruptly	abruptly	RB
cord-004862-yv76yvy5	43	19	at	at	IN
cord-004862-yv76yvy5	43	20	a	a	DT
cord-004862-yv76yvy5	43	21	conserved	conserved	JJ
cord-004862-yv76yvy5	43	22	stop	stop	NN
cord-004862-yv76yvy5	43	23	codon	codon	NN
cord-004862-yv76yvy5	43	24	(	(	-LRB-
cord-004862-yv76yvy5	43	25	Demers	Demers	NNP
cord-004862-yv76yvy5	43	26	et	et	FW
cord-004862-yv76yvy5	43	27	al	al	NNP
cord-004862-yv76yvy5	43	28	.	.	NNP
cord-004862-yv76yvy5	43	29	1986	1986	CD
cord-004862-yv76yvy5	43	30	)	)	-RRB-
cord-004862-yv76yvy5	43	31	.	.	.
cord-004862-yv76yvy5	44	1	In	in	IN
cord-004862-yv76yvy5	44	2	previous	previous	JJ
cord-004862-yv76yvy5	44	3	studies	study	NNS
cord-004862-yv76yvy5	44	4	on	on	IN
cord-004862-yv76yvy5	44	5	the	the	DT
cord-004862-yv76yvy5	44	6	L	l	NN
cord-004862-yv76yvy5	44	7	1	1	CD
cord-004862-yv76yvy5	44	8	repeats	repeat	VBZ
cord-004862-yv76yvy5	44	9	from	from	IN
cord-004862-yv76yvy5	44	10	rabbits	rabbit	NNS
cord-004862-yv76yvy5	44	11	(	(	-LRB-
cord-004862-yv76yvy5	44	12	L	L	NNP
cord-004862-yv76yvy5	44	13	10c	10c	NNP
cord-004862-yv76yvy5	44	14	,	,	,
cord-004862-yv76yvy5	44	15	for	for	IN
cord-004862-yv76yvy5	44	16	LINE	line	NN
cord-004862-yv76yvy5	44	17	1	1	CD
cord-004862-yv76yvy5	44	18	from	from	IN
cord-004862-yv76yvy5	44	19	Oryctolagus	Oryctolagus	NNP
cord-004862-yv76yvy5	44	20	cuniculus	cuniculus	NNP
cord-004862-yv76yvy5	44	21	)	)	-RRB-
cord-004862-yv76yvy5	44	22	,	,	,
cord-004862-yv76yvy5	44	23	the	the	DT
cord-004862-yv76yvy5	44	24	B	b	NN
cord-004862-yv76yvy5	44	25	,	,	,
cord-004862-yv76yvy5	44	26	E	E	NNP
cord-004862-yv76yvy5	44	27	,	,	,
cord-004862-yv76yvy5	44	28	and	and	CC
cord-004862-yv76yvy5	44	29	D	D	NNP
cord-004862-yv76yvy5	44	30	repeats	repeat	NNS
cord-004862-yv76yvy5	44	31	identified	identify	VBN
cord-004862-yv76yvy5	44	32	by	by	IN
cord-004862-yv76yvy5	44	33	Shen	Shen	NNP
cord-004862-yv76yvy5	44	34	and	and	CC
cord-004862-yv76yvy5	44	35	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	44	36	(	(	-LRB-
cord-004862-yv76yvy5	44	37	1980	1980	CD
cord-004862-yv76yvy5	44	38	)	)	-RRB-
cord-004862-yv76yvy5	44	39	were	be	VBD
cord-004862-yv76yvy5	44	40	shown	show	VBN
cord-004862-yv76yvy5	44	41	to	to	TO
cord-004862-yv76yvy5	44	42	be	be	VB
cord-004862-yv76yvy5	44	43	parts	part	NNS
cord-004862-yv76yvy5	44	44	of	of	IN
cord-004862-yv76yvy5	44	45	the	the	DT
cord-004862-yv76yvy5	44	46	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	44	47	repeat	repeat	NN
cord-004862-yv76yvy5	44	48	.	.	.
cord-004862-yv76yvy5	45	1	The	the	DT
cord-004862-yv76yvy5	45	2	sequence	sequence	NN
cord-004862-yv76yvy5	45	3	of	of	IN
cord-004862-yv76yvy5	45	4	one	one	CD
cord-004862-yv76yvy5	45	5	truncated	truncated	JJ
cord-004862-yv76yvy5	45	6	L1	L1	NNP
cord-004862-yv76yvy5	45	7	repeat	repeat	NN
cord-004862-yv76yvy5	45	8	and	and	CC
cord-004862-yv76yvy5	45	9	part	part	NN
cord-004862-yv76yvy5	45	10	of	of	IN
cord-004862-yv76yvy5	45	11	another	another	DT
cord-004862-yv76yvy5	45	12	repeat	repeat	NN
cord-004862-yv76yvy5	45	13	were	be	VBD
cord-004862-yv76yvy5	45	14	presented	present	VBN
cord-004862-yv76yvy5	45	15	as	as	IN
cord-004862-yv76yvy5	45	16	a	a	DT
cord-004862-yv76yvy5	45	17	composite	composite	JJ
cord-004862-yv76yvy5	45	18	sequence	sequence	NN
cord-004862-yv76yvy5	45	19	,	,	,
cord-004862-yv76yvy5	45	20	and	and	CC
cord-004862-yv76yvy5	45	21	the	the	DT
cord-004862-yv76yvy5	45	22	ORF	ORF	NNP
cord-004862-yv76yvy5	45	23	(	(	-LRB-
cord-004862-yv76yvy5	45	24	corresponding	correspond	VBG
cord-004862-yv76yvy5	45	25	to	to	IN
cord-004862-yv76yvy5	45	26	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	45	27	)	)	-RRB-
cord-004862-yv76yvy5	45	28	and	and	CC
cord-004862-yv76yvy5	45	29	3	3	CD
cord-004862-yv76yvy5	45	30	'	'	POS
cord-004862-yv76yvy5	45	31	untranslated	untranslated	JJ
cord-004862-yv76yvy5	45	32	region	region	NN
cord-004862-yv76yvy5	45	33	were	be	VBD
cord-004862-yv76yvy5	45	34	identified	identify	VBN
cord-004862-yv76yvy5	45	35	(	(	-LRB-
cord-004862-yv76yvy5	45	36	Demers	Demers	NNP
cord-004862-yv76yvy5	45	37	et	et	FW
cord-004862-yv76yvy5	45	38	al	al	NNP
cord-004862-yv76yvy5	45	39	.	.	NNP
cord-004862-yv76yvy5	45	40	1986	1986	CD
cord-004862-yv76yvy5	45	41	)	)	-RRB-
cord-004862-yv76yvy5	45	42	.	.	.
cord-004862-yv76yvy5	46	1	In	in	IN
cord-004862-yv76yvy5	46	2	this	this	DT
cord-004862-yv76yvy5	46	3	paper	paper	NN
cord-004862-yv76yvy5	46	4	,	,	,
cord-004862-yv76yvy5	46	5	the	the	DT
cord-004862-yv76yvy5	46	6	rabbit	rabbit	NN
cord-004862-yv76yvy5	46	7	L1	L1	NNP
cord-004862-yv76yvy5	46	8	repeats	repeat	VBZ
cord-004862-yv76yvy5	46	9	are	be	VBP
cord-004862-yv76yvy5	46	10	characterized	characterize	VBN
cord-004862-yv76yvy5	46	11	more	more	RBR
cord-004862-yv76yvy5	46	12	thoroughly	thoroughly	RB
cord-004862-yv76yvy5	46	13	,	,	,
cord-004862-yv76yvy5	46	14	and	and	CC
cord-004862-yv76yvy5	46	15	the	the	DT
cord-004862-yv76yvy5	46	16	similarities	similarity	NNS
cord-004862-yv76yvy5	46	17	and	and	CC
cord-004862-yv76yvy5	46	18	differences	difference	NNS
cord-004862-yv76yvy5	46	19	of	of	IN
cord-004862-yv76yvy5	46	20	L1	L1	NNP
cord-004862-yv76yvy5	46	21	sequences	sequence	NNS
cord-004862-yv76yvy5	46	22	between	between	IN
cord-004862-yv76yvy5	46	23	species	specie	NNS
cord-004862-yv76yvy5	46	24	are	be	VBP
cord-004862-yv76yvy5	46	25	explored	explore	VBN
cord-004862-yv76yvy5	46	26	further	further	RB
cord-004862-yv76yvy5	46	27	.	.	.
cord-004862-yv76yvy5	47	1	Interspecies	interspecies	JJ
cord-004862-yv76yvy5	47	2	comparisons	comparison	NNS
cord-004862-yv76yvy5	47	3	reinforce	reinforce	VBP
cord-004862-yv76yvy5	47	4	the	the	DT
cord-004862-yv76yvy5	47	5	conclusion	conclusion	NN
cord-004862-yv76yvy5	47	6	that	that	IN
cord-004862-yv76yvy5	47	7	the	the	DT
cord-004862-yv76yvy5	47	8	L1	L1	NNP
cord-004862-yv76yvy5	47	9	repeat	repeat	NN
cord-004862-yv76yvy5	47	10	has	have	VBZ
cord-004862-yv76yvy5	47	11	two	two	CD
cord-004862-yv76yvy5	47	12	ORFs	orf	NNS
cord-004862-yv76yvy5	47	13	that	that	WDT
cord-004862-yv76yvy5	47	14	are	be	VBP
cord-004862-yv76yvy5	47	15	conserved	conserve	VBN
cord-004862-yv76yvy5	47	16	for	for	IN
cord-004862-yv76yvy5	47	17	their	-PRON-	PRP$
cord-004862-yv76yvy5	47	18	protein	protein	NN
cord-004862-yv76yvy5	47	19	-	-	HYPH
cord-004862-yv76yvy5	47	20	coding	code	VBG
cord-004862-yv76yvy5	47	21	capacity	capacity	NN
cord-004862-yv76yvy5	47	22	.	.	.
cord-004862-yv76yvy5	48	1	However	however	RB
cord-004862-yv76yvy5	48	2	,	,	,
cord-004862-yv76yvy5	48	3	the	the	DT
cord-004862-yv76yvy5	48	4	region	region	NN
cord-004862-yv76yvy5	48	5	between	between	IN
cord-004862-yv76yvy5	48	6	the	the	DT
cord-004862-yv76yvy5	48	7	two	two	CD
cord-004862-yv76yvy5	48	8	ORFs	orfs	NN
cord-004862-yv76yvy5	48	9	is	be	VBZ
cord-004862-yv76yvy5	48	10	not	not	RB
cord-004862-yv76yvy5	48	11	conserved	conserve	VBN
cord-004862-yv76yvy5	48	12	among	among	IN
cord-004862-yv76yvy5	48	13	species	specie	NNS
cord-004862-yv76yvy5	48	14	,	,	,
cord-004862-yv76yvy5	48	15	and	and	CC
cord-004862-yv76yvy5	48	16	this	this	DT
cord-004862-yv76yvy5	48	17	observation	observation	NN
cord-004862-yv76yvy5	48	18	is	be	VBZ
cord-004862-yv76yvy5	48	19	used	use	VBN
cord-004862-yv76yvy5	48	20	to	to	TO
cord-004862-yv76yvy5	48	21	indicate	indicate	VB
cord-004862-yv76yvy5	48	22	possible	possible	JJ
cord-004862-yv76yvy5	48	23	start	start	VB
cord-004862-yv76yvy5	48	24	and	and	CC
cord-004862-yv76yvy5	48	25	stop	stop	VB
cord-004862-yv76yvy5	48	26	codons	codon	NNS
cord-004862-yv76yvy5	48	27	for	for	IN
cord-004862-yv76yvy5	48	28	the	the	DT
cord-004862-yv76yvy5	48	29	ORFs	ORFs	NNP
cord-004862-yv76yvy5	48	30	.	.	.
cord-004862-yv76yvy5	49	1	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	49	2	encodes	encode	VBZ
cord-004862-yv76yvy5	49	3	a	a	DT
cord-004862-yv76yvy5	49	4	composite	composite	JJ
cord-004862-yv76yvy5	49	5	protein	protein	NN
cord-004862-yv76yvy5	49	6	,	,	,
cord-004862-yv76yvy5	49	7	and	and	CC
cord-004862-yv76yvy5	49	8	the	the	DT
cord-004862-yv76yvy5	49	9	5	5	CD
cord-004862-yv76yvy5	49	10	'	'	CD
cord-004862-yv76yvy5	49	11	half	half	NN
cord-004862-yv76yvy5	49	12	of	of	IN
cord-004862-yv76yvy5	49	13	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	50	1	from	from	IN
cord-004862-yv76yvy5	50	2	L1Oc	l1oc	PRP
cord-004862-yv76yvy5	51	1	is	be	VBZ
cord-004862-yv76yvy5	51	2	related	relate	VBN
cord-004862-yv76yvy5	51	3	to	to	IN
cord-004862-yv76yvy5	51	4	type	type	NN
cord-004862-yv76yvy5	51	5	II	II	NNP
cord-004862-yv76yvy5	51	6	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	51	7	keratin	keratin	NN
cord-004862-yv76yvy5	51	8	.	.	.
cord-004862-yv76yvy5	52	1	Subcloning	Subcloning	NNP
cord-004862-yv76yvy5	52	2	and	and	CC
cord-004862-yv76yvy5	52	3	Sequencing	Sequencing	NNP
cord-004862-yv76yvy5	52	4	of	of	IN
cord-004862-yv76yvy5	52	5	LlOc	LlOc	NNP
cord-004862-yv76yvy5	52	6	Repeats	repeat	VBZ
cord-004862-yv76yvy5	52	7	.	.	.
cord-004862-yv76yvy5	53	1	The	the	DT
cord-004862-yv76yvy5	53	2	sequenced	sequence	VBN
cord-004862-yv76yvy5	53	3	members	member	NNS
cord-004862-yv76yvy5	53	4	of	of	IN
cord-004862-yv76yvy5	53	5	the	the	DT
cord-004862-yv76yvy5	53	6	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	53	7	family	family	NN
cord-004862-yv76yvy5	53	8	were	be	VBD
cord-004862-yv76yvy5	53	9	from	from	IN
cord-004862-yv76yvy5	53	10	the	the	DT
cord-004862-yv76yvy5	53	11	rabbit	rabbit	NN
cord-004862-yv76yvy5	53	12	0-like	0-like	CD
cord-004862-yv76yvy5	53	13	globin	globin	NN
cord-004862-yv76yvy5	53	14	gene	gene	NN
cord-004862-yv76yvy5	53	15	cluster	cluster	NN
cord-004862-yv76yvy5	53	16	isolated	isolate	VBN
cord-004862-yv76yvy5	53	17	by	by	IN
cord-004862-yv76yvy5	53	18	Lacy	Lacy	NNP
cord-004862-yv76yvy5	53	19	et	et	FW
cord-004862-yv76yvy5	53	20	al	al	NNP
cord-004862-yv76yvy5	53	21	.	.	.
cord-004862-yv76yvy5	54	1	(	(	-LRB-
cord-004862-yv76yvy5	54	2	1979	1979	CD
cord-004862-yv76yvy5	54	3	)	)	-RRB-
cord-004862-yv76yvy5	54	4	.	.	.
cord-004862-yv76yvy5	55	1	Interspersed	intersperse	VBN
cord-004862-yv76yvy5	55	2	repetitive	repetitive	JJ
cord-004862-yv76yvy5	55	3	DNA	dna	NN
cord-004862-yv76yvy5	55	4	was	be	VBD
cord-004862-yv76yvy5	55	5	identified	identify	VBN
cord-004862-yv76yvy5	55	6	by	by	IN
cord-004862-yv76yvy5	55	7	Shen	Shen	NNP
cord-004862-yv76yvy5	55	8	and	and	CC
cord-004862-yv76yvy5	55	9	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	55	10	(	(	-LRB-
cord-004862-yv76yvy5	55	11	1980	1980	CD
cord-004862-yv76yvy5	55	12	)	)	-RRB-
cord-004862-yv76yvy5	55	13	by	by	IN
cord-004862-yv76yvy5	55	14	hybridization	hybridization	NN
cord-004862-yv76yvy5	55	15	and	and	CC
cord-004862-yv76yvy5	55	16	heteroduplex	heteroduplex	NN
cord-004862-yv76yvy5	55	17	mapping	mapping	NN
cord-004862-yv76yvy5	55	18	.	.	.
cord-004862-yv76yvy5	56	1	The	the	DT
cord-004862-yv76yvy5	56	2	five	five	CD
cord-004862-yv76yvy5	56	3	L1	L1	NNP
cord-004862-yv76yvy5	56	4	members	member	NNS
cord-004862-yv76yvy5	56	5	(	(	-LRB-
cord-004862-yv76yvy5	56	6	Demers	Demers	NNP
cord-004862-yv76yvy5	56	7	et	et	FW
cord-004862-yv76yvy5	56	8	al	al	NNP
cord-004862-yv76yvy5	56	9	.	.	NNP
cord-004862-yv76yvy5	56	10	1986	1986	CD
cord-004862-yv76yvy5	56	11	)	)	-RRB-
cord-004862-yv76yvy5	56	12	were	be	VBD
cord-004862-yv76yvy5	56	13	sequenced	sequence	VBN
cord-004862-yv76yvy5	56	14	by	by	IN
cord-004862-yv76yvy5	56	15	dideoxynucleotide	dideoxynucleotide	NN
cord-004862-yv76yvy5	56	16	chain	chain	NN
cord-004862-yv76yvy5	56	17	termination	termination	NN
cord-004862-yv76yvy5	56	18	reactions	reaction	NNS
cord-004862-yv76yvy5	56	19	(	(	-LRB-
cord-004862-yv76yvy5	56	20	Sanger	Sanger	NNP
cord-004862-yv76yvy5	56	21	et	et	NNP
cord-004862-yv76yvy5	56	22	al	al	NNP
cord-004862-yv76yvy5	56	23	.	.	NNP
cord-004862-yv76yvy5	56	24	1977	1977	CD
cord-004862-yv76yvy5	56	25	)	)	-RRB-
cord-004862-yv76yvy5	57	1	using	use	VBG
cord-004862-yv76yvy5	57	2	subclones	subclone	NNS
cord-004862-yv76yvy5	57	3	in	in	IN
cord-004862-yv76yvy5	57	4	M13	M13	NNP
cord-004862-yv76yvy5	57	5	phages	phage	NNS
cord-004862-yv76yvy5	57	6	as	as	IN
cord-004862-yv76yvy5	57	7	templates	template	NNS
cord-004862-yv76yvy5	57	8	(	(	-LRB-
cord-004862-yv76yvy5	57	9	Messing	Messing	NNP
cord-004862-yv76yvy5	57	10	1983	1983	CD
cord-004862-yv76yvy5	57	11	)	)	-RRB-
cord-004862-yv76yvy5	57	12	.	.	.
cord-004862-yv76yvy5	58	1	Analysis	analysis	NN
cord-004862-yv76yvy5	58	2	of	of	IN
cord-004862-yv76yvy5	58	3	DNA	DNA	NNP
cord-004862-yv76yvy5	58	4	Sequences	Sequences	NNPS
cord-004862-yv76yvy5	58	5	.	.	.
cord-004862-yv76yvy5	59	1	Sequence	sequence	NN
cord-004862-yv76yvy5	59	2	matches	match	NNS
cord-004862-yv76yvy5	59	3	were	be	VBD
cord-004862-yv76yvy5	59	4	first	first	RB
cord-004862-yv76yvy5	59	5	identified	identify	VBN
cord-004862-yv76yvy5	59	6	by	by	IN
cord-004862-yv76yvy5	59	7	dot	dot	NN
cord-004862-yv76yvy5	59	8	plots	plot	NNS
cord-004862-yv76yvy5	59	9	generated	generate	VBN
cord-004862-yv76yvy5	59	10	by	by	IN
cord-004862-yv76yvy5	59	11	the	the	DT
cord-004862-yv76yvy5	59	12	computer	computer	NN
cord-004862-yv76yvy5	59	13	program	program	NN
cord-004862-yv76yvy5	59	14	MATRIX	MATRIX	NNP
cord-004862-yv76yvy5	59	15	(	(	-LRB-
cord-004862-yv76yvy5	59	16	Zweig	Zweig	NNP
cord-004862-yv76yvy5	59	17	1984	1984	CD
cord-004862-yv76yvy5	59	18	)	)	-RRB-
cord-004862-yv76yvy5	59	19	.	.	.
cord-004862-yv76yvy5	60	1	This	this	DT
cord-004862-yv76yvy5	60	2	provides	provide	VBZ
cord-004862-yv76yvy5	60	3	a	a	DT
cord-004862-yv76yvy5	60	4	graphical	graphical	JJ
cord-004862-yv76yvy5	60	5	display	display	NN
cord-004862-yv76yvy5	60	6	of	of	IN
cord-004862-yv76yvy5	60	7	sequence	sequence	NN
cord-004862-yv76yvy5	60	8	similarity	similarity	NN
cord-004862-yv76yvy5	60	9	that	that	WDT
cord-004862-yv76yvy5	60	10	plots	plot	VBZ
cord-004862-yv76yvy5	60	11	matches	match	NNS
cord-004862-yv76yvy5	60	12	(	(	-LRB-
cord-004862-yv76yvy5	60	13	forward	forward	JJ
cord-004862-yv76yvy5	60	14	similarity	similarity	NN
cord-004862-yv76yvy5	60	15	)	)	-RRB-
cord-004862-yv76yvy5	60	16	of	of	IN
cord-004862-yv76yvy5	60	17	23	23	CD
cord-004862-yv76yvy5	60	18	out	out	IN
cord-004862-yv76yvy5	60	19	of	of	IN
cord-004862-yv76yvy5	60	20	30	30	CD
cord-004862-yv76yvy5	60	21	bases	basis	NNS
cord-004862-yv76yvy5	60	22	.	.	.
cord-004862-yv76yvy5	61	1	Similar	similar	JJ
cord-004862-yv76yvy5	61	2	sequences	sequence	NNS
cord-004862-yv76yvy5	61	3	were	be	VBD
cord-004862-yv76yvy5	61	4	then	then	RB
cord-004862-yv76yvy5	61	5	aligned	align	VBN
cord-004862-yv76yvy5	61	6	by	by	IN
cord-004862-yv76yvy5	61	7	the	the	DT
cord-004862-yv76yvy5	61	8	computer	computer	NN
cord-004862-yv76yvy5	61	9	program	program	NN
cord-004862-yv76yvy5	61	10	NUCALN	NUCALN	NNP
cord-004862-yv76yvy5	61	11	(	(	-LRB-
cord-004862-yv76yvy5	61	12	Wilbur	Wilbur	NNP
cord-004862-yv76yvy5	61	13	and	and	CC
cord-004862-yv76yvy5	61	14	Lipman	Lipman	NNP
cord-004862-yv76yvy5	61	15	1983	1983	CD
cord-004862-yv76yvy5	61	16	)	)	-RRB-
cord-004862-yv76yvy5	61	17	using	use	VBG
cord-004862-yv76yvy5	61	18	the	the	DT
cord-004862-yv76yvy5	61	19	parameters	parameter	NNS
cord-004862-yv76yvy5	61	20	K	k	NN
cord-004862-yv76yvy5	61	21	-	-	HYPH
cord-004862-yv76yvy5	61	22	tuple	tuple	NN
cord-004862-yv76yvy5	61	23	=	=	SYM
cord-004862-yv76yvy5	61	24	3	3	CD
cord-004862-yv76yvy5	61	25	,	,	,
cord-004862-yv76yvy5	61	26	window	window	NN
cord-004862-yv76yvy5	61	27	size	size	NN
cord-004862-yv76yvy5	61	28	=	=	SYM
cord-004862-yv76yvy5	61	29	20	20	CD
cord-004862-yv76yvy5	61	30	,	,	,
cord-004862-yv76yvy5	61	31	gap	gap	NN
cord-004862-yv76yvy5	61	32	penalty	penalty	NN
cord-004862-yv76yvy5	61	33	=	=	SYM
cord-004862-yv76yvy5	61	34	7	7	CD
cord-004862-yv76yvy5	61	35	.	.	.
cord-004862-yv76yvy5	62	1	The	the	DT
cord-004862-yv76yvy5	62	2	protein	protein	NN
cord-004862-yv76yvy5	62	3	sequence	sequence	NN
cord-004862-yv76yvy5	62	4	databases	database	NNS
cord-004862-yv76yvy5	62	5	at	at	IN
cord-004862-yv76yvy5	62	6	the	the	DT
cord-004862-yv76yvy5	62	7	Protein	Protein	NNP
cord-004862-yv76yvy5	62	8	Identification	Identification	NNP
cord-004862-yv76yvy5	62	9	Resource	Resource	NNP
cord-004862-yv76yvy5	62	10	(	(	-LRB-
cord-004862-yv76yvy5	62	11	National	National	NNP
cord-004862-yv76yvy5	62	12	Biomedical	Biomedical	NNP
cord-004862-yv76yvy5	62	13	Research	Research	NNP
cord-004862-yv76yvy5	62	14	Foundation	Foundation	NNP
cord-004862-yv76yvy5	62	15	)	)	-RRB-
cord-004862-yv76yvy5	62	16	were	be	VBD
cord-004862-yv76yvy5	62	17	searched	search	VBN
cord-004862-yv76yvy5	62	18	using	use	VBG
cord-004862-yv76yvy5	62	19	the	the	DT
cord-004862-yv76yvy5	62	20	FASTp	fastp	NN
cord-004862-yv76yvy5	62	21	program	program	NN
cord-004862-yv76yvy5	62	22	(	(	-LRB-
cord-004862-yv76yvy5	62	23	Lipman	Lipman	NNP
cord-004862-yv76yvy5	62	24	and	and	CC
cord-004862-yv76yvy5	62	25	Pearson	Pearson	NNP
cord-004862-yv76yvy5	62	26	1985	1985	CD
cord-004862-yv76yvy5	62	27	)	)	-RRB-
cord-004862-yv76yvy5	62	28	.	.	.
cord-004862-yv76yvy5	63	1	The	the	DT
cord-004862-yv76yvy5	63	2	statistical	statistical	JJ
cord-004862-yv76yvy5	63	3	significance	significance	NN
cord-004862-yv76yvy5	63	4	of	of	IN
cord-004862-yv76yvy5	63	5	the	the	DT
cord-004862-yv76yvy5	63	6	similarities	similarity	NNS
cord-004862-yv76yvy5	63	7	found	find	VBN
cord-004862-yv76yvy5	63	8	by	by	IN
cord-004862-yv76yvy5	63	9	FASTp	FASTp	NNS
cord-004862-yv76yvy5	63	10	were	be	VBD
cord-004862-yv76yvy5	63	11	tested	test	VBN
cord-004862-yv76yvy5	63	12	using	use	VBG
cord-004862-yv76yvy5	63	13	the	the	DT
cord-004862-yv76yvy5	63	14	program	program	NN
cord-004862-yv76yvy5	63	15	RDF	RDF	NNP
cord-004862-yv76yvy5	63	16	(	(	-LRB-
cord-004862-yv76yvy5	63	17	National	National	NNP
cord-004862-yv76yvy5	63	18	Biomedical	Biomedical	NNP
cord-004862-yv76yvy5	63	19	Research	Research	NNP
cord-004862-yv76yvy5	63	20	Foundation	Foundation	NNP
cord-004862-yv76yvy5	63	21	)	)	-RRB-
cord-004862-yv76yvy5	63	22	;	;	:
cord-004862-yv76yvy5	63	23	this	this	DT
cord-004862-yv76yvy5	63	24	program	program	NN
cord-004862-yv76yvy5	63	25	scrambles	scramble	VBZ
cord-004862-yv76yvy5	63	26	the	the	DT
cord-004862-yv76yvy5	63	27	target	target	NN
cord-004862-yv76yvy5	63	28	sequence	sequence	NN
cord-004862-yv76yvy5	63	29	(	(	-LRB-
cord-004862-yv76yvy5	63	30	revealed	reveal	VBN
cord-004862-yv76yvy5	63	31	by	by	IN
cord-004862-yv76yvy5	63	32	FASTp	FASTp	NNP
cord-004862-yv76yvy5	63	33	)	)	-RRB-
cord-004862-yv76yvy5	63	34	into	into	IN
cord-004862-yv76yvy5	63	35	20	20	CD
cord-004862-yv76yvy5	63	36	shuffled	shuffle	VBN
cord-004862-yv76yvy5	63	37	sequences	sequence	NNS
cord-004862-yv76yvy5	63	38	and	and	CC
cord-004862-yv76yvy5	63	39	computes	compute	VBZ
cord-004862-yv76yvy5	63	40	the	the	DT
cord-004862-yv76yvy5	63	41	mean	mean	JJ
cord-004862-yv76yvy5	63	42	similarity	similarity	NN
cord-004862-yv76yvy5	63	43	score	score	NN
cord-004862-yv76yvy5	63	44	for	for	IN
cord-004862-yv76yvy5	63	45	the	the	DT
cord-004862-yv76yvy5	63	46	shuffled	shuffle	VBN
cord-004862-yv76yvy5	63	47	sequence	sequence	NN
cord-004862-yv76yvy5	63	48	with	with	IN
cord-004862-yv76yvy5	63	49	the	the	DT
cord-004862-yv76yvy5	63	50	test	test	NN
cord-004862-yv76yvy5	63	51	sequence	sequence	NN
cord-004862-yv76yvy5	63	52	(	(	-LRB-
cord-004862-yv76yvy5	63	53	in	in	IN
cord-004862-yv76yvy5	63	54	this	this	DT
cord-004862-yv76yvy5	63	55	case	case	NN
cord-004862-yv76yvy5	63	56	,	,	,
cord-004862-yv76yvy5	63	57	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	63	58	of	of	IN
cord-004862-yv76yvy5	63	59	L	L	NNP
cord-004862-yv76yvy5	63	60	10c	10c	CD
cord-004862-yv76yvy5	63	61	)	)	-RRB-
cord-004862-yv76yvy5	63	62	.	.	.
cord-004862-yv76yvy5	64	1	The	the	DT
cord-004862-yv76yvy5	64	2	similarity	similarity	NN
cord-004862-yv76yvy5	64	3	score	score	NN
cord-004862-yv76yvy5	64	4	for	for	IN
cord-004862-yv76yvy5	64	5	the	the	DT
cord-004862-yv76yvy5	64	6	match	match	NN
cord-004862-yv76yvy5	64	7	between	between	IN
cord-004862-yv76yvy5	64	8	the	the	DT
cord-004862-yv76yvy5	64	9	true	true	JJ
cord-004862-yv76yvy5	64	10	sequences	sequence	NNS
cord-004862-yv76yvy5	64	11	is	be	VBZ
cord-004862-yv76yvy5	64	12	compared	compare	VBN
cord-004862-yv76yvy5	64	13	with	with	IN
cord-004862-yv76yvy5	64	14	the	the	DT
cord-004862-yv76yvy5	64	15	mean	mean	JJ
cord-004862-yv76yvy5	64	16	score	score	NN
cord-004862-yv76yvy5	64	17	for	for	IN
cord-004862-yv76yvy5	64	18	the	the	DT
cord-004862-yv76yvy5	64	19	shuffled	shuffle	VBN
cord-004862-yv76yvy5	64	20	sequences	sequence	NNS
cord-004862-yv76yvy5	64	21	in	in	IN
cord-004862-yv76yvy5	64	22	terms	term	NNS
cord-004862-yv76yvy5	64	23	of	of	IN
cord-004862-yv76yvy5	64	24	the	the	DT
cord-004862-yv76yvy5	64	25	number	number	NN
cord-004862-yv76yvy5	64	26	of	of	IN
cord-004862-yv76yvy5	64	27	standard	standard	JJ
cord-004862-yv76yvy5	64	28	deviations	deviation	NNS
cord-004862-yv76yvy5	64	29	that	that	WDT
cord-004862-yv76yvy5	64	30	separate	separate	VBP
cord-004862-yv76yvy5	64	31	them	-PRON-	PRP
cord-004862-yv76yvy5	64	32	.	.	.
cord-004862-yv76yvy5	65	1	conditions	condition	NNS
cord-004862-yv76yvy5	65	2	as	as	IN
cord-004862-yv76yvy5	65	3	in	in	IN
cord-004862-yv76yvy5	65	4	the	the	DT
cord-004862-yv76yvy5	65	5	Southern	southern	JJ
cord-004862-yv76yvy5	65	6	blot	blot	NN
cord-004862-yv76yvy5	65	7	analysis	analysis	NN
cord-004862-yv76yvy5	65	8	.	.	.
cord-004862-yv76yvy5	66	1	The	the	DT
cord-004862-yv76yvy5	66	2	ratio	ratio	NN
cord-004862-yv76yvy5	66	3	of	of	IN
cord-004862-yv76yvy5	66	4	percentage	percentage	NN
cord-004862-yv76yvy5	66	5	of	of	IN
cord-004862-yv76yvy5	66	6	plaques	plaque	NNS
cord-004862-yv76yvy5	66	7	that	that	WDT
cord-004862-yv76yvy5	66	8	hybridized	hybridize	VBD
cord-004862-yv76yvy5	66	9	to	to	IN
cord-004862-yv76yvy5	66	10	the	the	DT
cord-004862-yv76yvy5	66	11	percentage	percentage	NN
cord-004862-yv76yvy5	66	12	of	of	IN
cord-004862-yv76yvy5	66	13	the	the	DT
cord-004862-yv76yvy5	66	14	rabbit	rabbit	NN
cord-004862-yv76yvy5	66	15	genome	genome	NN
cord-004862-yv76yvy5	66	16	in	in	IN
cord-004862-yv76yvy5	66	17	one	one	CD
cord-004862-yv76yvy5	66	18	h	h	NN
cord-004862-yv76yvy5	66	19	clone	clone	NN
cord-004862-yv76yvy5	66	20	gives	give	VBZ
cord-004862-yv76yvy5	66	21	the	the	DT
cord-004862-yv76yvy5	66	22	approximate	approximate	JJ
cord-004862-yv76yvy5	66	23	copy	copy	NN
cord-004862-yv76yvy5	66	24	number	number	NN
cord-004862-yv76yvy5	66	25	of	of	IN
cord-004862-yv76yvy5	66	26	the	the	DT
cord-004862-yv76yvy5	66	27	region	region	NN
cord-004862-yv76yvy5	66	28	.	.	.
cord-004862-yv76yvy5	67	1	The	the	DT
cord-004862-yv76yvy5	67	2	average	average	JJ
cord-004862-yv76yvy5	67	3	size	size	NN
cord-004862-yv76yvy5	67	4	of	of	IN
cord-004862-yv76yvy5	67	5	an	an	DT
cord-004862-yv76yvy5	67	6	insert	insert	NN
cord-004862-yv76yvy5	67	7	in	in	IN
cord-004862-yv76yvy5	67	8	this	this	DT
cord-004862-yv76yvy5	67	9	~	~	NFP
cord-004862-yv76yvy5	67	10	,	,	,
cord-004862-yv76yvy5	67	11	library	library	NN
cord-004862-yv76yvy5	67	12	is	be	VBZ
cord-004862-yv76yvy5	67	13	17	17	CD
cord-004862-yv76yvy5	67	14	kb	kb	NNP
cord-004862-yv76yvy5	68	1	(	(	-LRB-
cord-004862-yv76yvy5	68	2	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	68	3	et	et	NNP
cord-004862-yv76yvy5	68	4	al	al	NNP
cord-004862-yv76yvy5	68	5	.	.	.
cord-004862-yv76yvy5	68	6	1978	1978	CD
cord-004862-yv76yvy5	68	7	)	)	-RRB-
cord-004862-yv76yvy5	68	8	.	.	.
cord-004862-yv76yvy5	69	1	Thus	thus	RB
cord-004862-yv76yvy5	69	2	,	,	,
cord-004862-yv76yvy5	69	3	the	the	DT
cord-004862-yv76yvy5	69	4	fraction	fraction	NN
cord-004862-yv76yvy5	69	5	of	of	IN
cord-004862-yv76yvy5	69	6	the	the	DT
cord-004862-yv76yvy5	69	7	rabbit	rabbit	NN
cord-004862-yv76yvy5	69	8	genome	genome	NN
cord-004862-yv76yvy5	69	9	per	per	IN
cord-004862-yv76yvy5	69	10	phage	phage	NN
cord-004862-yv76yvy5	69	11	is	be	VBZ
cord-004862-yv76yvy5	69	12	17	17	CD
cord-004862-yv76yvy5	70	1	•	•	NNP
cord-004862-yv76yvy5	71	1	103/3	103/3	CD
cord-004862-yv76yvy5	72	1	x	x	SYM
cord-004862-yv76yvy5	72	2	109	109	CD
cord-004862-yv76yvy5	72	3	or	or	CC
cord-004862-yv76yvy5	72	4	5.7	5.7	CD
cord-004862-yv76yvy5	72	5	•	•	NNS
cord-004862-yv76yvy5	72	6	10	10	CD
cord-004862-yv76yvy5	72	7	-	-	SYM
cord-004862-yv76yvy5	72	8	4	4	CD
cord-004862-yv76yvy5	72	9	%	%	NN
cord-004862-yv76yvy5	72	10	.	.	.
cord-004862-yv76yvy5	73	1	The	the	DT
cord-004862-yv76yvy5	73	2	fact	fact	NN
cord-004862-yv76yvy5	73	3	that	that	IN
cord-004862-yv76yvy5	73	4	96	96	CD
cord-004862-yv76yvy5	73	5	%	%	NN
cord-004862-yv76yvy5	73	6	of	of	IN
cord-004862-yv76yvy5	73	7	the	the	DT
cord-004862-yv76yvy5	73	8	phage	phage	NN
cord-004862-yv76yvy5	73	9	in	in	IN
cord-004862-yv76yvy5	73	10	the	the	DT
cord-004862-yv76yvy5	73	11	library	library	NN
cord-004862-yv76yvy5	73	12	have	have	VBP
cord-004862-yv76yvy5	73	13	rabbit	rabbit	NN
cord-004862-yv76yvy5	73	14	DNA	dna	NN
cord-004862-yv76yvy5	73	15	(	(	-LRB-
cord-004862-yv76yvy5	73	16	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	73	17	et	et	NNP
cord-004862-yv76yvy5	73	18	al	al	NNP
cord-004862-yv76yvy5	73	19	.	.	.
cord-004862-yv76yvy5	73	20	1978	1978	CD
cord-004862-yv76yvy5	73	21	)	)	-RRB-
cord-004862-yv76yvy5	73	22	was	be	VBD
cord-004862-yv76yvy5	73	23	also	also	RB
cord-004862-yv76yvy5	73	24	taken	take	VBN
cord-004862-yv76yvy5	73	25	into	into	IN
cord-004862-yv76yvy5	73	26	account	account	NN
cord-004862-yv76yvy5	73	27	.	.	.
cord-004862-yv76yvy5	74	1	Rodent	rodent	NN
cord-004862-yv76yvy5	74	2	and	and	CC
cord-004862-yv76yvy5	74	3	Human	Human	NNP
cord-004862-yv76yvy5	74	4	L1	L1	NNP
cord-004862-yv76yvy5	74	5	Sequences	Sequences	NNPS
cord-004862-yv76yvy5	74	6	.	.	.
cord-004862-yv76yvy5	75	1	The	the	DT
cord-004862-yv76yvy5	75	2	mouse	mouse	NN
cord-004862-yv76yvy5	75	3	LI	LI	NNP
cord-004862-yv76yvy5	75	4	sequence	sequence	NN
cord-004862-yv76yvy5	75	5	,	,	,
cord-004862-yv76yvy5	75	6	LIMdA2	LIMdA2	NNP
cord-004862-yv76yvy5	75	7	,	,	,
cord-004862-yv76yvy5	75	8	and	and	CC
cord-004862-yv76yvy5	75	9	the	the	DT
cord-004862-yv76yvy5	75	10	rat	rat	NN
cord-004862-yv76yvy5	75	11	LI	LI	NNP
cord-004862-yv76yvy5	75	12	sequence	sequence	NN
cord-004862-yv76yvy5	75	13	,	,	,
cord-004862-yv76yvy5	75	14	L1Rn	L1Rn	NNP
cord-004862-yv76yvy5	75	15	or	or	CC
cord-004862-yv76yvy5	75	16	LINE3	line3	JJ
cord-004862-yv76yvy5	76	1	(	(	-LRB-
cord-004862-yv76yvy5	76	2	D'Ambrosio	D'Ambrosio	NNP
cord-004862-yv76yvy5	76	3	et	et	NNP
cord-004862-yv76yvy5	76	4	al	al	NNP
cord-004862-yv76yvy5	76	5	.	.	.
cord-004862-yv76yvy5	76	6	1986	1986	CD
cord-004862-yv76yvy5	76	7	)	)	-RRB-
cord-004862-yv76yvy5	76	8	are	be	VBP
cord-004862-yv76yvy5	76	9	randomly	randomly	RB
cord-004862-yv76yvy5	76	10	isolated	isolate	VBN
cord-004862-yv76yvy5	76	11	L1	L1	NNP
cord-004862-yv76yvy5	76	12	members	member	NNS
cord-004862-yv76yvy5	76	13	from	from	IN
cord-004862-yv76yvy5	76	14	their	-PRON-	PRP$
cord-004862-yv76yvy5	76	15	respective	respective	JJ
cord-004862-yv76yvy5	76	16	genomes	genome	NNS
cord-004862-yv76yvy5	76	17	.	.	.
cord-004862-yv76yvy5	77	1	The	the	DT
cord-004862-yv76yvy5	77	2	human	human	JJ
cord-004862-yv76yvy5	77	3	L1	l1	NN
cord-004862-yv76yvy5	77	4	sequence	sequence	NN
cord-004862-yv76yvy5	77	5	,	,	,
cord-004862-yv76yvy5	77	6	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	77	7	-	-	HYPH
cord-004862-yv76yvy5	77	8	TBG41	TBG41	NNP
cord-004862-yv76yvy5	77	9	,	,	,
cord-004862-yv76yvy5	77	10	is	be	VBZ
cord-004862-yv76yvy5	77	11	located	locate	VBN
cord-004862-yv76yvy5	77	12	3.3	3.3	CD
cord-004862-yv76yvy5	77	13	kb	kb	NNP
cord-004862-yv76yvy5	77	14	3	3	CD
cord-004862-yv76yvy5	77	15	'	'	''
cord-004862-yv76yvy5	77	16	to	to	IN
cord-004862-yv76yvy5	77	17	the	the	DT
cord-004862-yv76yvy5	77	18	human/]-globin	human/]-globin	NNP
cord-004862-yv76yvy5	77	19	gene	gene	NN
cord-004862-yv76yvy5	77	20	(	(	-LRB-
cord-004862-yv76yvy5	77	21	Hanori	Hanori	NNP
cord-004862-yv76yvy5	77	22	et	et	NNP
cord-004862-yv76yvy5	77	23	al	al	NNP
cord-004862-yv76yvy5	77	24	.	.	.
cord-004862-yv76yvy5	77	25	1985	1985	CD
cord-004862-yv76yvy5	77	26	)	)	-RRB-
cord-004862-yv76yvy5	77	27	.	.	.
cord-004862-yv76yvy5	78	1	A	a	DT
cord-004862-yv76yvy5	78	2	consensus	consensus	NN
cord-004862-yv76yvy5	78	3	L1Hs	l1hs	CD
cord-004862-yv76yvy5	78	4	sequence	sequence	NN
cord-004862-yv76yvy5	78	5	(	(	-LRB-
cord-004862-yv76yvy5	78	6	Scott	Scott	NNP
cord-004862-yv76yvy5	78	7	et	et	NNP
cord-004862-yv76yvy5	78	8	al	al	NNP
cord-004862-yv76yvy5	78	9	.	.	NNP
cord-004862-yv76yvy5	78	10	1987	1987	CD
cord-004862-yv76yvy5	78	11	)	)	-RRB-
cord-004862-yv76yvy5	78	12	was	be	VBD
cord-004862-yv76yvy5	78	13	used	use	VBN
cord-004862-yv76yvy5	78	14	in	in	IN
cord-004862-yv76yvy5	78	15	the	the	DT
cord-004862-yv76yvy5	78	16	analysis	analysis	NN
cord-004862-yv76yvy5	78	17	of	of	IN
cord-004862-yv76yvy5	78	18	ORF	ORF	NNP
cord-004862-yv76yvy5	78	19	-	-	HYPH
cord-004862-yv76yvy5	78	20	I	I	NNP
cord-004862-yv76yvy5	78	21	in	in	IN
cord-004862-yv76yvy5	78	22	Fig	Fig	NNP
cord-004862-yv76yvy5	78	23	.	.	.
cord-004862-yv76yvy5	79	1	8	8	CD
cord-004862-yv76yvy5	79	2	.	.	.
cord-004862-yv76yvy5	80	1	The	the	DT
cord-004862-yv76yvy5	80	2	interspersion	interspersion	NN
cord-004862-yv76yvy5	80	3	of	of	IN
cord-004862-yv76yvy5	80	4	repetitive	repetitive	JJ
cord-004862-yv76yvy5	80	5	sequences	sequence	NNS
cord-004862-yv76yvy5	80	6	among	among	IN
cord-004862-yv76yvy5	80	7	the	the	DT
cord-004862-yv76yvy5	80	8	rabbit	rabbit	NN
cord-004862-yv76yvy5	80	9	B	b	NN
cord-004862-yv76yvy5	80	10	-	-	HYPH
cord-004862-yv76yvy5	80	11	like	like	JJ
cord-004862-yv76yvy5	80	12	globin	globin	NN
cord-004862-yv76yvy5	80	13	genes	gene	NNS
cord-004862-yv76yvy5	80	14	is	be	VBZ
cord-004862-yv76yvy5	80	15	shown	show	VBN
cord-004862-yv76yvy5	80	16	in	in	IN
cord-004862-yv76yvy5	80	17	Fig	Fig	NNP
cord-004862-yv76yvy5	80	18	.	.	.
cord-004862-yv76yvy5	81	1	1	1	LS
cord-004862-yv76yvy5	81	2	.	.	.
cord-004862-yv76yvy5	82	1	The	the	DT
cord-004862-yv76yvy5	82	2	genes	gene	NNS
cord-004862-yv76yvy5	82	3	~	~	NFP
cord-004862-yv76yvy5	82	4	and	and	CC
cord-004862-yv76yvy5	82	5	7	7	CD
cord-004862-yv76yvy5	82	6	(	(	-LRB-
cord-004862-yv76yvy5	82	7	formerly/34	formerly/34	NNP
cord-004862-yv76yvy5	82	8	and/33	and/33	NNP
cord-004862-yv76yvy5	82	9	)	)	-RRB-
cord-004862-yv76yvy5	82	10	are	be	VBP
cord-004862-yv76yvy5	82	11	expressed	express	VBN
cord-004862-yv76yvy5	82	12	in	in	IN
cord-004862-yv76yvy5	82	13	embryonic	embryonic	JJ
cord-004862-yv76yvy5	82	14	development	development	NN
cord-004862-yv76yvy5	82	15	(	(	-LRB-
cord-004862-yv76yvy5	82	16	Rohrbaugh	Rohrbaugh	NNP
cord-004862-yv76yvy5	82	17	and	and	CC
cord-004862-yv76yvy5	82	18	Hardison	Hardison	NNP
cord-004862-yv76yvy5	82	19	1983	1983	CD
cord-004862-yv76yvy5	82	20	)	)	-RRB-
cord-004862-yv76yvy5	82	21	,	,	.
cord-004862-yv76yvy5	83	1	~	~	NFP
cord-004862-yv76yvy5	83	2	(	(	-LRB-
cord-004862-yv76yvy5	83	3	~b/32	~b/32	NFP
cord-004862-yv76yvy5	83	4	)	)	-RRB-
cord-004862-yv76yvy5	83	5	is	be	VBZ
cord-004862-yv76yvy5	83	6	an	an	DT
cord-004862-yv76yvy5	83	7	inactive	inactive	JJ
cord-004862-yv76yvy5	83	8	pseudogene	pseudogene	NN
cord-004862-yv76yvy5	83	9	(	(	-LRB-
cord-004862-yv76yvy5	83	10	Lacy	Lacy	NNP
cord-004862-yv76yvy5	83	11	and	and	CC
cord-004862-yv76yvy5	83	12	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	83	13	1980	1980	CD
cord-004862-yv76yvy5	83	14	)	)	-RRB-
cord-004862-yv76yvy5	83	15	,	,	,
cord-004862-yv76yvy5	83	16	and/3	and/3	NNP
cord-004862-yv76yvy5	83	17	(	(	-LRB-
cord-004862-yv76yvy5	83	18	/31	/31	NNP
cord-004862-yv76yvy5	83	19	)	)	-RRB-
cord-004862-yv76yvy5	83	20	is	be	VBZ
cord-004862-yv76yvy5	83	21	expressed	express	VBN
cord-004862-yv76yvy5	83	22	in	in	IN
cord-004862-yv76yvy5	83	23	fetal	fetal	JJ
cord-004862-yv76yvy5	83	24	and	and	CC
cord-004862-yv76yvy5	83	25	adult	adult	NN
cord-004862-yv76yvy5	83	26	life	life	NN
cord-004862-yv76yvy5	83	27	(	(	-LRB-
cord-004862-yv76yvy5	83	28	Hardison	Hardison	NNP
cord-004862-yv76yvy5	83	29	et	et	NNP
cord-004862-yv76yvy5	83	30	al	al	NNP
cord-004862-yv76yvy5	83	31	.	.	.
cord-004862-yv76yvy5	83	32	1979	1979	CD
cord-004862-yv76yvy5	83	33	;	;	.
cord-004862-yv76yvy5	84	1	Rohrbaugh	Rohrbaugh	NNP
cord-004862-yv76yvy5	84	2	et	et	NNP
cord-004862-yv76yvy5	84	3	al	al	NNP
cord-004862-yv76yvy5	84	4	.	.	.
cord-004862-yv76yvy5	84	5	1985	1985	CD
cord-004862-yv76yvy5	84	6	)	)	-RRB-
cord-004862-yv76yvy5	84	7	.	.	.
cord-004862-yv76yvy5	85	1	The	the	DT
cord-004862-yv76yvy5	85	2	5	5	CD
cord-004862-yv76yvy5	85	3	'	'	''
cord-004862-yv76yvy5	85	4	to	to	IN
cord-004862-yv76yvy5	85	5	3	3	CD
cord-004862-yv76yvy5	85	6	'	'	''
cord-004862-yv76yvy5	85	7	orientations	orientation	NNS
cord-004862-yv76yvy5	85	8	of	of	IN
cord-004862-yv76yvy5	85	9	the	the	DT
cord-004862-yv76yvy5	85	10	proposed	propose	VBN
cord-004862-yv76yvy5	85	11	RNA	RNA	NNP
cord-004862-yv76yvy5	85	12	intermediates	intermediate	NNS
cord-004862-yv76yvy5	85	13	of	of	IN
cord-004862-yv76yvy5	85	14	the	the	DT
cord-004862-yv76yvy5	85	15	repetitive	repetitive	JJ
cord-004862-yv76yvy5	85	16	elements	element	NNS
cord-004862-yv76yvy5	85	17	are	be	VBP
cord-004862-yv76yvy5	85	18	indicated	indicate	VBN
cord-004862-yv76yvy5	85	19	by	by	IN
cord-004862-yv76yvy5	85	20	the	the	DT
cord-004862-yv76yvy5	85	21	arrows	arrow	NNS
cord-004862-yv76yvy5	85	22	in	in	IN
cord-004862-yv76yvy5	85	23	Fig	Fig	NNP
cord-004862-yv76yvy5	85	24	.	.	.
cord-004862-yv76yvy5	86	1	1	1	LS
cord-004862-yv76yvy5	86	2	;	;	:
cord-004862-yv76yvy5	86	3	the	the	DT
cord-004862-yv76yvy5	86	4	A	a	RB
cord-004862-yv76yvy5	86	5	-	-	HYPH
cord-004862-yv76yvy5	86	6	rich	rich	JJ
cord-004862-yv76yvy5	86	7	tracts	tract	NNS
cord-004862-yv76yvy5	86	8	are	be	VBP
cord-004862-yv76yvy5	86	9	at	at	IN
cord-004862-yv76yvy5	86	10	the	the	DT
cord-004862-yv76yvy5	86	11	3	3	CD
cord-004862-yv76yvy5	86	12	'	'	''
cord-004862-yv76yvy5	86	13	ends	end	NNS
cord-004862-yv76yvy5	86	14	.	.	.
cord-004862-yv76yvy5	87	1	The	the	DT
cord-004862-yv76yvy5	87	2	sequences	sequence	NNS
cord-004862-yv76yvy5	87	3	of	of	IN
cord-004862-yv76yvy5	87	4	the	the	DT
cord-004862-yv76yvy5	87	5	five	five	CD
cord-004862-yv76yvy5	87	6	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	87	7	repeats	repeat	NNS
cord-004862-yv76yvy5	87	8	are	be	VBP
cord-004862-yv76yvy5	87	9	presented	present	VBN
cord-004862-yv76yvy5	87	10	in	in	IN
cord-004862-yv76yvy5	87	11	Fig	Fig	NNP
cord-004862-yv76yvy5	87	12	.	.	.
cord-004862-yv76yvy5	88	1	2	2	LS
cord-004862-yv76yvy5	88	2	.	.	.
cord-004862-yv76yvy5	89	1	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	89	2	is	be	VBZ
cord-004862-yv76yvy5	89	3	adjacent	adjacent	JJ
cord-004862-yv76yvy5	89	4	to	to	IN
cord-004862-yv76yvy5	89	5	L1	L1	NNP
cord-004862-yv76yvy5	89	6	Oc4	Oc4	NNP
cord-004862-yv76yvy5	90	1	(	(	-LRB-
cord-004862-yv76yvy5	90	2	Fig	Fig	NNP
cord-004862-yv76yvy5	90	3	.	.	NNP
cord-004862-yv76yvy5	90	4	1	1	CD
cord-004862-yv76yvy5	90	5	)	)	-RRB-
cord-004862-yv76yvy5	90	6	,	,	,
cord-004862-yv76yvy5	90	7	so	so	CC
cord-004862-yv76yvy5	90	8	the	the	DT
cord-004862-yv76yvy5	90	9	last	last	JJ
cord-004862-yv76yvy5	90	10	nucleotide	nucleotide	NN
cord-004862-yv76yvy5	90	11	in	in	IN
cord-004862-yv76yvy5	90	12	the	the	DT
cord-004862-yv76yvy5	90	13	L1	L1	NNP
cord-004862-yv76yvy5	90	14	Oc5	oc5	NN
cord-004862-yv76yvy5	90	15	sequence	sequence	NN
cord-004862-yv76yvy5	90	16	is	be	VBZ
cord-004862-yv76yvy5	90	17	followed	follow	VBN
cord-004862-yv76yvy5	90	18	by	by	IN
cord-004862-yv76yvy5	90	19	the	the	DT
cord-004862-yv76yvy5	90	20	first	first	JJ
cord-004862-yv76yvy5	90	21	nucleotide	nucleotide	NN
cord-004862-yv76yvy5	90	22	in	in	IN
cord-004862-yv76yvy5	90	23	the	the	DT
cord-004862-yv76yvy5	90	24	L1	L1	NNP
cord-004862-yv76yvy5	90	25	Oc4	Oc4	NNP
cord-004862-yv76yvy5	90	26	sequence	sequence	NN
cord-004862-yv76yvy5	90	27	(	(	-LRB-
cord-004862-yv76yvy5	90	28	Fig	Fig	NNP
cord-004862-yv76yvy5	90	29	.	.	NNP
cord-004862-yv76yvy5	90	30	2	2	CD
cord-004862-yv76yvy5	90	31	)	)	-RRB-
cord-004862-yv76yvy5	90	32	in	in	IN
cord-004862-yv76yvy5	90	33	the	the	DT
cord-004862-yv76yvy5	90	34	sequence	sequence	NN
cord-004862-yv76yvy5	90	35	of	of	IN
cord-004862-yv76yvy5	90	36	the	the	DT
cord-004862-yv76yvy5	90	37	gene	gene	NN
cord-004862-yv76yvy5	90	38	cluster	cluster	NN
cord-004862-yv76yvy5	90	39	(	(	-LRB-
cord-004862-yv76yvy5	90	40	Margot	Margot	NNP
cord-004862-yv76yvy5	90	41	et	et	NNP
cord-004862-yv76yvy5	90	42	al	al	NNP
cord-004862-yv76yvy5	90	43	.	.	NNP
cord-004862-yv76yvy5	90	44	1989	1989	CD
cord-004862-yv76yvy5	90	45	)	)	-RRB-
cord-004862-yv76yvy5	90	46	.	.	.
cord-004862-yv76yvy5	91	1	The	the	DT
cord-004862-yv76yvy5	91	2	longest	long	JJS
cord-004862-yv76yvy5	91	3	member	member	NN
cord-004862-yv76yvy5	91	4	of	of	IN
cord-004862-yv76yvy5	91	5	the	the	DT
cord-004862-yv76yvy5	91	6	rabbit	rabbit	NN
cord-004862-yv76yvy5	91	7	L1	L1	NNP
cord-004862-yv76yvy5	91	8	family	family	NN
cord-004862-yv76yvy5	91	9	in	in	IN
cord-004862-yv76yvy5	91	10	the	the	DT
cord-004862-yv76yvy5	91	11	/3-like	/3-like	JJ
cord-004862-yv76yvy5	91	12	globin	globin	NN
cord-004862-yv76yvy5	91	13	gene	gene	NN
cord-004862-yv76yvy5	91	14	cluster	cluster	NN
cord-004862-yv76yvy5	91	15	is	be	VBZ
cord-004862-yv76yvy5	91	16	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	91	17	.	.	.
cord-004862-yv76yvy5	92	1	The	the	DT
cord-004862-yv76yvy5	92	2	next	next	JJ
cord-004862-yv76yvy5	92	3	longest	long	JJS
cord-004862-yv76yvy5	92	4	member	member	NN
cord-004862-yv76yvy5	92	5	is	be	VBZ
cord-004862-yv76yvy5	92	6	LI	LI	NNP
cord-004862-yv76yvy5	92	7	Oc4	Oc4	NNP
cord-004862-yv76yvy5	92	8	;	;	:
cord-004862-yv76yvy5	92	9	it	-PRON-	PRP
cord-004862-yv76yvy5	92	10	has	have	VBZ
cord-004862-yv76yvy5	92	11	an	an	DT
cord-004862-yv76yvy5	92	12	internal	internal	JJ
cord-004862-yv76yvy5	92	13	deletion	deletion	NN
cord-004862-yv76yvy5	92	14	of	of	IN
cord-004862-yv76yvy5	92	15	667	667	CD
cord-004862-yv76yvy5	92	16	bp	bp	NNP
cord-004862-yv76yvy5	92	17	(	(	-LRB-
cord-004862-yv76yvy5	92	18	Fig	Fig	NNP
cord-004862-yv76yvy5	92	19	.	.	NNP
cord-004862-yv76yvy5	92	20	2	2	CD
cord-004862-yv76yvy5	92	21	,	,	,
cord-004862-yv76yvy5	92	22	.	.	.
cord-004862-yv76yvy5	93	1	This	this	DT
cord-004862-yv76yvy5	93	2	is	be	VBZ
cord-004862-yv76yvy5	93	3	clearly	clearly	RB
cord-004862-yv76yvy5	93	4	a	a	DT
cord-004862-yv76yvy5	93	5	deletion	deletion	NN
cord-004862-yv76yvy5	93	6	from	from	IN
cord-004862-yv76yvy5	93	7	L	L	NNP
cord-004862-yv76yvy5	93	8	I	-PRON-	PRP
cord-004862-yv76yvy5	93	9	Oc4	Oc4	VBD
cord-004862-yv76yvy5	93	10	and	and	CC
cord-004862-yv76yvy5	93	11	not	not	RB
cord-004862-yv76yvy5	93	12	an	an	DT
cord-004862-yv76yvy5	93	13	insertion	insertion	NN
cord-004862-yv76yvy5	93	14	in	in	IN
cord-004862-yv76yvy5	93	15	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	93	16	because	because	IN
cord-004862-yv76yvy5	93	17	a	a	DT
cord-004862-yv76yvy5	93	18	similar	similar	JJ
cord-004862-yv76yvy5	93	19	sequence	sequence	NN
cord-004862-yv76yvy5	93	20	is	be	VBZ
cord-004862-yv76yvy5	93	21	present	present	JJ
cord-004862-yv76yvy5	93	22	in	in	IN
cord-004862-yv76yvy5	93	23	both	both	DT
cord-004862-yv76yvy5	93	24	mouse	mouse	NN
cord-004862-yv76yvy5	93	25	and	and	CC
cord-004862-yv76yvy5	93	26	human	human	JJ
cord-004862-yv76yvy5	93	27	Lls	Lls	NNP
cord-004862-yv76yvy5	93	28	(	(	-LRB-
cord-004862-yv76yvy5	93	29	Demers	Demers	NNP
cord-004862-yv76yvy5	93	30	et	et	FW
cord-004862-yv76yvy5	93	31	al	al	NNP
cord-004862-yv76yvy5	93	32	.	.	NNP
cord-004862-yv76yvy5	93	33	1986	1986	CD
cord-004862-yv76yvy5	93	34	)	)	-RRB-
cord-004862-yv76yvy5	93	35	.	.	.
cord-004862-yv76yvy5	94	1	L1	L1	NNP
cord-004862-yv76yvy5	94	2	Oc5	oc5	NN
cord-004862-yv76yvy5	94	3	will	will	MD
cord-004862-yv76yvy5	94	4	be	be	VB
cord-004862-yv76yvy5	94	5	the	the	DT
cord-004862-yv76yvy5	94	6	prototypical	prototypical	JJ
cord-004862-yv76yvy5	94	7	rabbit	rabbit	NN
cord-004862-yv76yvy5	94	8	L1	l1	NN
cord-004862-yv76yvy5	94	9	for	for	IN
cord-004862-yv76yvy5	94	10	further	further	JJ
cord-004862-yv76yvy5	94	11	analysis	analysis	NN
cord-004862-yv76yvy5	94	12	because	because	IN
cord-004862-yv76yvy5	94	13	it	-PRON-	PRP
cord-004862-yv76yvy5	94	14	is	be	VBZ
cord-004862-yv76yvy5	94	15	the	the	DT
cord-004862-yv76yvy5	94	16	longest	long	JJS
cord-004862-yv76yvy5	94	17	and	and	CC
cord-004862-yv76yvy5	94	18	has	have	VBZ
cord-004862-yv76yvy5	94	19	no	no	DT
cord-004862-yv76yvy5	94	20	extensive	extensive	JJ
cord-004862-yv76yvy5	94	21	internal	internal	JJ
cord-004862-yv76yvy5	94	22	deletions	deletion	NNS
cord-004862-yv76yvy5	94	23	.	.	.
cord-004862-yv76yvy5	95	1	The	the	DT
cord-004862-yv76yvy5	95	2	5	5	CD
cord-004862-yv76yvy5	95	3	'	'	NN
cord-004862-yv76yvy5	95	4	end	end	NN
cord-004862-yv76yvy5	95	5	of	of	IN
cord-004862-yv76yvy5	95	6	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	95	7	is	be	VBZ
cord-004862-yv76yvy5	95	8	also	also	RB
cord-004862-yv76yvy5	95	9	the	the	DT
cord-004862-yv76yvy5	95	10	end	end	NN
cord-004862-yv76yvy5	95	11	of	of	IN
cord-004862-yv76yvy5	95	12	the	the	DT
cord-004862-yv76yvy5	95	13	cloned	clone	VBN
cord-004862-yv76yvy5	95	14	region	region	NN
cord-004862-yv76yvy5	95	15	of	of	IN
cord-004862-yv76yvy5	95	16	the	the	DT
cord-004862-yv76yvy5	95	17	rabbit	rabbit	NN
cord-004862-yv76yvy5	96	1	/3-like	/3-like	JJ
cord-004862-yv76yvy5	96	2	globin	globin	NN
cord-004862-yv76yvy5	96	3	gene	gene	NN
cord-004862-yv76yvy5	96	4	cluster	cluster	NN
cord-004862-yv76yvy5	96	5	(	(	-LRB-
cord-004862-yv76yvy5	96	6	see	see	VB
cord-004862-yv76yvy5	96	7	Fig	Fig	NNP
cord-004862-yv76yvy5	96	8	.	.	NNP
cord-004862-yv76yvy5	96	9	1	1	CD
cord-004862-yv76yvy5	96	10	)	)	-RRB-
cord-004862-yv76yvy5	96	11	.	.	.
cord-004862-yv76yvy5	97	1	Only	only	RB
cord-004862-yv76yvy5	97	2	two	two	CD
cord-004862-yv76yvy5	97	3	of	of	IN
cord-004862-yv76yvy5	97	4	the	the	DT
cord-004862-yv76yvy5	97	5	Shen	Shen	NNP
cord-004862-yv76yvy5	97	6	and	and	CC
cord-004862-yv76yvy5	97	7	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	97	8	(	(	-LRB-
cord-004862-yv76yvy5	97	9	1980	1980	CD
cord-004862-yv76yvy5	97	10	)	)	-RRB-
cord-004862-yv76yvy5	97	11	are	be	VBP
cord-004862-yv76yvy5	97	12	shown	show	VBN
cord-004862-yv76yvy5	97	13	at	at	IN
cord-004862-yv76yvy5	97	14	the	the	DT
cord-004862-yv76yvy5	97	15	bottom	bottom	NN
cord-004862-yv76yvy5	97	16	of	of	IN
cord-004862-yv76yvy5	97	17	the	the	DT
cord-004862-yv76yvy5	97	18	diagram	diagram	NN
cord-004862-yv76yvy5	97	19	.	.	.
cord-004862-yv76yvy5	98	1	individual	individual	NNP
cord-004862-yv76yvy5	98	2	repeats	repeat	VBZ
cord-004862-yv76yvy5	98	3	,	,	,
cord-004862-yv76yvy5	98	4	L1Oc4	L1Oc4	NNP
cord-004862-yv76yvy5	98	5	and	and	CC
cord-004862-yv76yvy5	98	6	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	98	7	,	,	,
cord-004862-yv76yvy5	98	8	contain	contain	VBP
cord-004862-yv76yvy5	98	9	sequences	sequence	NNS
cord-004862-yv76yvy5	98	10	for	for	IN
cord-004862-yv76yvy5	98	11	the	the	DT
cord-004862-yv76yvy5	98	12	ORF	ORF	NNP
cord-004862-yv76yvy5	98	13	region	region	NN
cord-004862-yv76yvy5	98	14	(	(	-LRB-
cord-004862-yv76yvy5	98	15	Demers	Demers	NNP
cord-004862-yv76yvy5	98	16	et	et	FW
cord-004862-yv76yvy5	98	17	al	al	NNP
cord-004862-yv76yvy5	98	18	.	.	NNP
cord-004862-yv76yvy5	98	19	1986	1986	CD
cord-004862-yv76yvy5	98	20	)	)	-RRB-
cord-004862-yv76yvy5	98	21	.	.	.
cord-004862-yv76yvy5	99	1	The	the	DT
cord-004862-yv76yvy5	99	2	other	other	JJ
cord-004862-yv76yvy5	99	3	three	three	CD
cord-004862-yv76yvy5	99	4	repeats	repeat	NNS
cord-004862-yv76yvy5	99	5	contain	contain	VBP
cord-004862-yv76yvy5	99	6	part	part	NN
cord-004862-yv76yvy5	99	7	or	or	CC
cord-004862-yv76yvy5	99	8	all	all	DT
cord-004862-yv76yvy5	99	9	of	of	IN
cord-004862-yv76yvy5	99	10	the	the	DT
cord-004862-yv76yvy5	99	11	3	3	CD
cord-004862-yv76yvy5	99	12	'	'	POS
cord-004862-yv76yvy5	99	13	untranslated	untranslated	JJ
cord-004862-yv76yvy5	99	14	region	region	NN
cord-004862-yv76yvy5	99	15	.	.	.
cord-004862-yv76yvy5	100	1	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	100	2	and	and	CC
cord-004862-yv76yvy5	100	3	L1Ocl	L1Ocl	NNP
cord-004862-yv76yvy5	100	4	have	have	VBP
cord-004862-yv76yvy5	100	5	internal	internal	JJ
cord-004862-yv76yvy5	100	6	direct	direct	JJ
cord-004862-yv76yvy5	100	7	repeats	repeat	NNS
cord-004862-yv76yvy5	100	8	of	of	IN
cord-004862-yv76yvy5	100	9	78	78	CD
cord-004862-yv76yvy5	100	10	bp	bp	NNS
cord-004862-yv76yvy5	100	11	in	in	IN
cord-004862-yv76yvy5	100	12	the	the	DT
cord-004862-yv76yvy5	100	13	3	3	CD
cord-004862-yv76yvy5	100	14	'	'	POS
cord-004862-yv76yvy5	100	15	untranslated	untranslated	JJ
cord-004862-yv76yvy5	100	16	region	region	NN
cord-004862-yv76yvy5	100	17	.	.	.
cord-004862-yv76yvy5	101	1	One	one	CD
cord-004862-yv76yvy5	101	2	copy	copy	NN
cord-004862-yv76yvy5	101	3	of	of	IN
cord-004862-yv76yvy5	101	4	the	the	DT
cord-004862-yv76yvy5	101	5	repeat	repeat	NN
cord-004862-yv76yvy5	101	6	is	be	VBZ
cord-004862-yv76yvy5	101	7	at	at	IN
cord-004862-yv76yvy5	101	8	positions	position	NNS
cord-004862-yv76yvy5	101	9	6015	6015	CD
cord-004862-yv76yvy5	101	10	-	-	SYM
cord-004862-yv76yvy5	101	11	6092	6092	CD
cord-004862-yv76yvy5	101	12	and	and	CC
cord-004862-yv76yvy5	101	13	the	the	DT
cord-004862-yv76yvy5	101	14	other	other	JJ
cord-004862-yv76yvy5	101	15	is	be	VBZ
cord-004862-yv76yvy5	101	16	at	at	IN
cord-004862-yv76yvy5	101	17	positions	position	NNS
cord-004862-yv76yvy5	101	18	6212	6212	CD
cord-004862-yv76yvy5	101	19	-	-	HYPH
cord-004862-yv76yvy5	101	20	6289	6289	CD
cord-004862-yv76yvy5	101	21	(	(	-LRB-
cord-004862-yv76yvy5	101	22	lower	low	JJR
cord-004862-yv76yvy5	101	23	case	case	NN
cord-004862-yv76yvy5	101	24	letters	letter	NNS
cord-004862-yv76yvy5	101	25	in	in	IN
cord-004862-yv76yvy5	101	26	Fig	Fig	NNP
cord-004862-yv76yvy5	101	27	.	.	.
cord-004862-yv76yvy5	101	28	 	 	_SP
cord-004862-yv76yvy5	101	29	2	2	CD
cord-004862-yv76yvy5	101	30	)	)	-RRB-
cord-004862-yv76yvy5	101	31	.	.	.
cord-004862-yv76yvy5	102	1	L1Oc4	L1Oc4	NNP
cord-004862-yv76yvy5	102	2	and	and	CC
cord-004862-yv76yvy5	102	3	L1Oc3	L1Oc3	NNP
cord-004862-yv76yvy5	102	4	have	have	VBP
cord-004862-yv76yvy5	102	5	only	only	RB
cord-004862-yv76yvy5	102	6	one	one	CD
cord-004862-yv76yvy5	102	7	copy	copy	NN
cord-004862-yv76yvy5	102	8	of	of	IN
cord-004862-yv76yvy5	102	9	this	this	DT
cord-004862-yv76yvy5	102	10	78-bp	78-bp	CD
cord-004862-yv76yvy5	102	11	sequence	sequence	NN
cord-004862-yv76yvy5	102	12	,	,	,
cord-004862-yv76yvy5	102	13	and	and	CC
cord-004862-yv76yvy5	102	14	they	-PRON-	PRP
cord-004862-yv76yvy5	102	15	do	do	VBP
cord-004862-yv76yvy5	102	16	not	not	RB
cord-004862-yv76yvy5	102	17	contain	contain	VB
cord-004862-yv76yvy5	102	18	the	the	DT
cord-004862-yv76yvy5	102	19	sequence	sequence	NN
cord-004862-yv76yvy5	102	20	between	between	IN
cord-004862-yv76yvy5	102	21	the	the	DT
cord-004862-yv76yvy5	102	22	78-bp	78-bp	CD
cord-004862-yv76yvy5	102	23	direct	direct	JJ
cord-004862-yv76yvy5	102	24	repeat	repeat	NN
cord-004862-yv76yvy5	102	25	(	(	-LRB-
cord-004862-yv76yvy5	102	26	present	present	JJ
cord-004862-yv76yvy5	102	27	in	in	IN
cord-004862-yv76yvy5	102	28	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	102	29	and	and	CC
cord-004862-yv76yvy5	102	30	L1Ocl	L1Ocl	NNP
cord-004862-yv76yvy5	102	31	)	)	-RRB-
cord-004862-yv76yvy5	102	32	.	.	.
cord-004862-yv76yvy5	103	1	Thus	thus	RB
cord-004862-yv76yvy5	103	2	,	,	,
cord-004862-yv76yvy5	103	3	the	the	DT
cord-004862-yv76yvy5	103	4	class	class	NN
cord-004862-yv76yvy5	103	5	of	of	IN
cord-004862-yv76yvy5	103	6	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	103	7	repeats	repeat	VBZ
cord-004862-yv76yvy5	103	8	containing	contain	VBG
cord-004862-yv76yvy5	103	9	one	one	CD
cord-004862-yv76yvy5	103	10	copy	copy	NN
cord-004862-yv76yvy5	103	11	of	of	IN
cord-004862-yv76yvy5	103	12	the	the	DT
cord-004862-yv76yvy5	103	13	78-bp	78-bp	CD
cord-004862-yv76yvy5	103	14	sequence	sequence	NN
cord-004862-yv76yvy5	103	15	could	could	MD
cord-004862-yv76yvy5	103	16	be	be	VB
cord-004862-yv76yvy5	103	17	derived	derive	VBN
cord-004862-yv76yvy5	103	18	from	from	IN
cord-004862-yv76yvy5	103	19	the	the	DT
cord-004862-yv76yvy5	103	20	class	class	NN
cord-004862-yv76yvy5	103	21	containing	contain	VBG
cord-004862-yv76yvy5	103	22	two	two	CD
cord-004862-yv76yvy5	103	23	copies	copy	NNS
cord-004862-yv76yvy5	103	24	by	by	IN
cord-004862-yv76yvy5	103	25	a	a	DT
cord-004862-yv76yvy5	103	26	deletion	deletion	NN
cord-004862-yv76yvy5	103	27	between	between	IN
cord-004862-yv76yvy5	103	28	the	the	DT
cord-004862-yv76yvy5	103	29	two	two	CD
cord-004862-yv76yvy5	103	30	78-bp	78-bp	CD
cord-004862-yv76yvy5	103	31	sequences	sequence	NNS
cord-004862-yv76yvy5	103	32	.	.	.
cord-004862-yv76yvy5	104	1	Another	another	DT
cord-004862-yv76yvy5	104	2	example	example	NN
cord-004862-yv76yvy5	104	3	of	of	IN
cord-004862-yv76yvy5	104	4	a	a	DT
cord-004862-yv76yvy5	104	5	sequence	sequence	NN
cord-004862-yv76yvy5	104	6	rearrangement	rearrangement	NN
cord-004862-yv76yvy5	104	7	is	be	VBZ
cord-004862-yv76yvy5	104	8	the	the	DT
cord-004862-yv76yvy5	104	9	apparent	apparent	JJ
cord-004862-yv76yvy5	104	10	insertion	insertion	NN
cord-004862-yv76yvy5	104	11	of	of	IN
cord-004862-yv76yvy5	104	12	34	34	CD
cord-004862-yv76yvy5	104	13	bp	bp	NNP
cord-004862-yv76yvy5	104	14	into	into	IN
cord-004862-yv76yvy5	104	15	L	L	NNP
cord-004862-yv76yvy5	104	16	10e4	10e4	CD
cord-004862-yv76yvy5	104	17	between	between	IN
cord-004862-yv76yvy5	104	18	positions	position	NNS
cord-004862-yv76yvy5	104	19	5701	5701	CD
cord-004862-yv76yvy5	104	20	-	-	SYM
cord-004862-yv76yvy5	104	21	5702	5702	CD
cord-004862-yv76yvy5	104	22	of	of	IN
cord-004862-yv76yvy5	104	23	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	104	24	.	.	.
cord-004862-yv76yvy5	105	1	Most	Most	JJS
cord-004862-yv76yvy5	105	2	members	member	NNS
cord-004862-yv76yvy5	105	3	of	of	IN
cord-004862-yv76yvy5	105	4	the	the	DT
cord-004862-yv76yvy5	105	5	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	105	6	family	family	NN
cord-004862-yv76yvy5	105	7	are	be	VBP
cord-004862-yv76yvy5	105	8	flanked	flank	VBN
cord-004862-yv76yvy5	105	9	by	by	IN
cord-004862-yv76yvy5	105	10	short	short	JJ
cord-004862-yv76yvy5	105	11	direct	direct	JJ
cord-004862-yv76yvy5	105	12	repeats	repeat	NNS
cord-004862-yv76yvy5	105	13	.	.	.
cord-004862-yv76yvy5	106	1	L	L	NNP
cord-004862-yv76yvy5	106	2	10c	10c	NNP
cord-004862-yv76yvy5	106	3	1	1	CD
cord-004862-yv76yvy5	106	4	and	and	CC
cord-004862-yv76yvy5	106	5	L	l	NN
cord-004862-yv76yvy5	106	6	1	1	CD
cord-004862-yv76yvy5	106	7	Oc2	oc2	CD
cord-004862-yv76yvy5	106	8	are	be	VBP
cord-004862-yv76yvy5	106	9	flanked	flank	VBN
cord-004862-yv76yvy5	106	10	by	by	IN
cord-004862-yv76yvy5	106	11	direct	direct	JJ
cord-004862-yv76yvy5	106	12	repeats	repeat	NNS
cord-004862-yv76yvy5	106	13	of	of	IN
cord-004862-yv76yvy5	106	14	9	9	CD
cord-004862-yv76yvy5	106	15	bp	bp	NNP
cord-004862-yv76yvy5	106	16	and	and	CC
cord-004862-yv76yvy5	106	17	5	5	CD
cord-004862-yv76yvy5	106	18	bp	bp	NNP
cord-004862-yv76yvy5	106	19	,	,	,
cord-004862-yv76yvy5	106	20	respectively	respectively	RB
cord-004862-yv76yvy5	106	21	(	(	-LRB-
cord-004862-yv76yvy5	106	22	Fig	fig	NN
cord-004862-yv76yvy5	106	23	.	.	.
cord-004862-yv76yvy5	106	24	 	 	_SP
cord-004862-yv76yvy5	106	25	2	2	CD
cord-004862-yv76yvy5	106	26	)	)	-RRB-
cord-004862-yv76yvy5	106	27	.	.	.
cord-004862-yv76yvy5	107	1	The	the	DT
cord-004862-yv76yvy5	107	2	flanking	flank	VBG
cord-004862-yv76yvy5	107	3	direct	direct	JJ
cord-004862-yv76yvy5	107	4	repeats	repeat	NNS
cord-004862-yv76yvy5	107	5	differ	differ	VBP
cord-004862-yv76yvy5	107	6	for	for	IN
cord-004862-yv76yvy5	107	7	the	the	DT
cord-004862-yv76yvy5	107	8	two	two	CD
cord-004862-yv76yvy5	107	9	individual	individual	JJ
cord-004862-yv76yvy5	107	10	L	L	NNP
cord-004862-yv76yvy5	107	11	1	1	CD
cord-004862-yv76yvy5	107	12	repeats	repeat	VBZ
cord-004862-yv76yvy5	107	13	,	,	,
cord-004862-yv76yvy5	107	14	showing	show	VBG
cord-004862-yv76yvy5	107	15	that	that	IN
cord-004862-yv76yvy5	107	16	they	-PRON-	PRP
cord-004862-yv76yvy5	107	17	are	be	VBP
cord-004862-yv76yvy5	107	18	not	not	RB
cord-004862-yv76yvy5	107	19	part	part	NN
cord-004862-yv76yvy5	107	20	of	of	IN
cord-004862-yv76yvy5	107	21	the	the	DT
cord-004862-yv76yvy5	107	22	L1	L1	NNP
cord-004862-yv76yvy5	107	23	sequence	sequence	NN
cord-004862-yv76yvy5	107	24	.	.	.
cord-004862-yv76yvy5	108	1	Such	such	JJ
cord-004862-yv76yvy5	108	2	flanking	flank	VBG
cord-004862-yv76yvy5	108	3	direct	direct	JJ
cord-004862-yv76yvy5	108	4	repeats	repeat	NNS
cord-004862-yv76yvy5	108	5	are	be	VBP
cord-004862-yv76yvy5	108	6	often	often	RB
cord-004862-yv76yvy5	108	7	generated	generate	VBN
cord-004862-yv76yvy5	108	8	by	by	IN
cord-004862-yv76yvy5	108	9	insertion	insertion	NN
cord-004862-yv76yvy5	108	10	of	of	IN
cord-004862-yv76yvy5	108	11	transposable	transposable	JJ
cord-004862-yv76yvy5	108	12	elements	element	NNS
cord-004862-yv76yvy5	108	13	presumably	presumably	RB
cord-004862-yv76yvy5	108	14	by	by	IN
cord-004862-yv76yvy5	108	15	repair	repair	NN
cord-004862-yv76yvy5	108	16	of	of	IN
cord-004862-yv76yvy5	108	17	a	a	DT
cord-004862-yv76yvy5	108	18	staggered	staggered	JJ
cord-004862-yv76yvy5	108	19	break	break	NN
cord-004862-yv76yvy5	108	20	at	at	IN
cord-004862-yv76yvy5	108	21	the	the	DT
cord-004862-yv76yvy5	108	22	target	target	NN
cord-004862-yv76yvy5	108	23	site	site	NN
cord-004862-yv76yvy5	108	24	.	.	.
cord-004862-yv76yvy5	109	1	The	the	DT
cord-004862-yv76yvy5	109	2	flanking	flank	VBG
cord-004862-yv76yvy5	109	3	direct	direct	JJ
cord-004862-yv76yvy5	109	4	repeats	repeat	NNS
cord-004862-yv76yvy5	109	5	for	for	IN
cord-004862-yv76yvy5	109	6	L	l	NN
cord-004862-yv76yvy5	109	7	1	1	CD
cord-004862-yv76yvy5	109	8	Oc4	oc4	CD
cord-004862-yv76yvy5	109	9	and	and	CC
cord-004862-yv76yvy5	109	10	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	109	11	can	can	MD
cord-004862-yv76yvy5	109	12	not	not	RB
cord-004862-yv76yvy5	109	13	be	be	VB
cord-004862-yv76yvy5	109	14	identified	identify	VBN
cord-004862-yv76yvy5	109	15	with	with	IN
cord-004862-yv76yvy5	109	16	the	the	DT
cord-004862-yv76yvy5	109	17	available	available	JJ
cord-004862-yv76yvy5	109	18	data	datum	NNS
cord-004862-yv76yvy5	109	19	.	.	.
cord-004862-yv76yvy5	110	1	The	the	DT
cord-004862-yv76yvy5	110	2	5	5	CD
cord-004862-yv76yvy5	110	3	'	'	NN
cord-004862-yv76yvy5	110	4	end	end	NN
cord-004862-yv76yvy5	110	5	of	of	IN
cord-004862-yv76yvy5	110	6	L1Oe5	L1Oe5	NNP
cord-004862-yv76yvy5	110	7	has	have	VBZ
cord-004862-yv76yvy5	110	8	not	not	RB
cord-004862-yv76yvy5	110	9	been	be	VBN
cord-004862-yv76yvy5	110	10	cloned	clone	VBN
cord-004862-yv76yvy5	110	11	.	.	.
cord-004862-yv76yvy5	111	1	Because	because	IN
cord-004862-yv76yvy5	111	2	L1	L1	NNP
cord-004862-yv76yvy5	111	3	Oc5	oc5	NN
cord-004862-yv76yvy5	111	4	is	be	VBZ
cord-004862-yv76yvy5	111	5	juxtaposed	juxtapose	VBN
cord-004862-yv76yvy5	111	6	to	to	IN
cord-004862-yv76yvy5	111	7	LI	LI	NNP
cord-004862-yv76yvy5	111	8	Oc4	Oc4	NNP
cord-004862-yv76yvy5	111	9	,	,	,
cord-004862-yv76yvy5	111	10	it	-PRON-	PRP
cord-004862-yv76yvy5	111	11	is	be	VBZ
cord-004862-yv76yvy5	111	12	possible	possible	JJ
cord-004862-yv76yvy5	111	13	that	that	IN
cord-004862-yv76yvy5	111	14	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	111	15	may	may	MD
cord-004862-yv76yvy5	111	16	have	have	VB
cord-004862-yv76yvy5	111	17	inserted	insert	VBN
cord-004862-yv76yvy5	111	18	into	into	IN
cord-004862-yv76yvy5	111	19	L1Oc4	L1Oc4	NNP
cord-004862-yv76yvy5	111	20	,	,	,
cord-004862-yv76yvy5	111	21	in	in	IN
cord-004862-yv76yvy5	111	22	which	which	WDT
cord-004862-yv76yvy5	111	23	case	case	NN
cord-004862-yv76yvy5	111	24	the	the	DT
cord-004862-yv76yvy5	111	25	5	5	CD
cord-004862-yv76yvy5	111	26	'	'	NN
cord-004862-yv76yvy5	111	27	end	end	NN
cord-004862-yv76yvy5	111	28	of	of	IN
cord-004862-yv76yvy5	111	29	L1Oc4	L1Oc4	NNP
cord-004862-yv76yvy5	111	30	is	be	VBZ
cord-004862-yv76yvy5	111	31	also	also	RB
cord-004862-yv76yvy5	111	32	not	not	RB
cord-004862-yv76yvy5	111	33	available	available	JJ
cord-004862-yv76yvy5	111	34	.	.	.
cord-004862-yv76yvy5	112	1	The	the	DT
cord-004862-yv76yvy5	112	2	only	only	JJ
cord-004862-yv76yvy5	112	3	other	other	JJ
cord-004862-yv76yvy5	112	4	L1	L1	NNP
cord-004862-yv76yvy5	112	5	member	member	NN
cord-004862-yv76yvy5	112	6	,	,	,
cord-004862-yv76yvy5	112	7	L1Oc3	L1Oc3	NNP
cord-004862-yv76yvy5	112	8	,	,	,
cord-004862-yv76yvy5	112	9	does	do	VBZ
cord-004862-yv76yvy5	112	10	not	not	RB
cord-004862-yv76yvy5	112	11	have	have	VB
cord-004862-yv76yvy5	112	12	obvious	obvious	JJ
cord-004862-yv76yvy5	112	13	flanking	flank	VBG
cord-004862-yv76yvy5	112	14	direct	direct	JJ
cord-004862-yv76yvy5	112	15	repeats	repeat	NNS
cord-004862-yv76yvy5	112	16	generated	generate	VBN
cord-004862-yv76yvy5	112	17	by	by	IN
cord-004862-yv76yvy5	112	18	a	a	DT
cord-004862-yv76yvy5	112	19	duplication	duplication	NN
cord-004862-yv76yvy5	112	20	of	of	IN
cord-004862-yv76yvy5	112	21	the	the	DT
cord-004862-yv76yvy5	112	22	target	target	NN
cord-004862-yv76yvy5	112	23	site	site	NN
cord-004862-yv76yvy5	112	24	.	.	.
cord-004862-yv76yvy5	113	1	The	the	DT
cord-004862-yv76yvy5	113	2	sequence	sequence	NN
cord-004862-yv76yvy5	113	3	GTTAAAAAAA	GTTAAAAAAA	NNP
cord-004862-yv76yvy5	113	4	found	find	VBD
cord-004862-yv76yvy5	113	5	just	just	RB
cord-004862-yv76yvy5	113	6	3	3	CD
cord-004862-yv76yvy5	113	7	'	'	''
cord-004862-yv76yvy5	113	8	to	to	IN
cord-004862-yv76yvy5	113	9	the	the	DT
cord-004862-yv76yvy5	113	10	polyadenylation	polyadenylation	NN
cord-004862-yv76yvy5	113	11	site	site	NN
cord-004862-yv76yvy5	113	12	(	(	-LRB-
cord-004862-yv76yvy5	113	13	positions	position	NNS
cord-004862-yv76yvy5	113	14	6438	6438	CD
cord-004862-yv76yvy5	113	15	-	-	SYM
cord-004862-yv76yvy5	113	16	6447	6447	CD
cord-004862-yv76yvy5	113	17	)	)	-RRB-
cord-004862-yv76yvy5	113	18	is	be	VBZ
cord-004862-yv76yvy5	113	19	also	also	RB
cord-004862-yv76yvy5	113	20	found	find	VBN
cord-004862-yv76yvy5	113	21	upstream	upstream	RB
cord-004862-yv76yvy5	113	22	from	from	IN
cord-004862-yv76yvy5	113	23	L1Oc3	L1Oc3	NNP
cord-004862-yv76yvy5	113	24	(	(	-LRB-
cord-004862-yv76yvy5	113	25	Margot	Margot	NNP
cord-004862-yv76yvy5	113	26	et	et	NNP
cord-004862-yv76yvy5	113	27	al	al	NNP
cord-004862-yv76yvy5	113	28	.	.	NNP
cord-004862-yv76yvy5	113	29	1989	1989	CD
cord-004862-yv76yvy5	113	30	)	)	-RRB-
cord-004862-yv76yvy5	113	31	.	.	.
cord-004862-yv76yvy5	114	1	However	however	RB
cord-004862-yv76yvy5	114	2	,	,	,
cord-004862-yv76yvy5	114	3	because	because	IN
cord-004862-yv76yvy5	114	4	the	the	DT
cord-004862-yv76yvy5	114	5	sequence	sequence	NN
cord-004862-yv76yvy5	114	6	GTT(A)7	GTT(A)7	NNP
cord-004862-yv76yvy5	114	7	(	(	-LRB-
cord-004862-yv76yvy5	114	8	or	or	CC
cord-004862-yv76yvy5	114	9	a	a	DT
cord-004862-yv76yvy5	114	10	slight	slight	JJ
cord-004862-yv76yvy5	114	11	variation	variation	NN
cord-004862-yv76yvy5	114	12	ofi0	ofi0	NN
cord-004862-yv76yvy5	114	13	is	be	VBZ
cord-004862-yv76yvy5	114	14	also	also	RB
cord-004862-yv76yvy5	114	15	found	find	VBN
cord-004862-yv76yvy5	114	16	in	in	IN
cord-004862-yv76yvy5	114	17	all	all	DT
cord-004862-yv76yvy5	114	18	of	of	IN
cord-004862-yv76yvy5	114	19	the	the	DT
cord-004862-yv76yvy5	114	20	other	other	JJ
cord-004862-yv76yvy5	114	21	L1	L1	NNP
cord-004862-yv76yvy5	114	22	sequences	sequence	NNS
cord-004862-yv76yvy5	114	23	just	just	RB
cord-004862-yv76yvy5	114	24	3	3	CD
cord-004862-yv76yvy5	114	25	'	'	''
cord-004862-yv76yvy5	114	26	to	to	IN
cord-004862-yv76yvy5	114	27	the	the	DT
cord-004862-yv76yvy5	114	28	polyadenylation	polyadenylation	NN
cord-004862-yv76yvy5	114	29	signal	signal	NN
cord-004862-yv76yvy5	114	30	,	,	,
cord-004862-yv76yvy5	114	31	it	-PRON-	PRP
cord-004862-yv76yvy5	114	32	is	be	VBZ
cord-004862-yv76yvy5	114	33	likely	likely	JJ
cord-004862-yv76yvy5	114	34	not	not	RB
cord-004862-yv76yvy5	114	35	to	to	TO
cord-004862-yv76yvy5	114	36	have	have	VB
cord-004862-yv76yvy5	114	37	been	be	VBN
cord-004862-yv76yvy5	114	38	generated	generate	VBN
cord-004862-yv76yvy5	114	39	by	by	IN
cord-004862-yv76yvy5	114	40	a	a	DT
cord-004862-yv76yvy5	114	41	target	target	NN
cord-004862-yv76yvy5	114	42	site	site	NN
cord-004862-yv76yvy5	114	43	duplication	duplication	NN
cord-004862-yv76yvy5	114	44	around	around	IN
cord-004862-yv76yvy5	114	45	L1Oc3	L1Oc3	NNP
cord-004862-yv76yvy5	114	46	.	.	.
cord-004862-yv76yvy5	115	1	This	this	DT
cord-004862-yv76yvy5	115	2	terminal	terminal	JJ
cord-004862-yv76yvy5	115	3	repetition	repetition	NN
cord-004862-yv76yvy5	115	4	could	could	MD
cord-004862-yv76yvy5	115	5	be	be	VB
cord-004862-yv76yvy5	115	6	generated	generate	VBN
cord-004862-yv76yvy5	115	7	by	by	IN
cord-004862-yv76yvy5	115	8	insertion	insertion	NN
cord-004862-yv76yvy5	115	9	of	of	IN
cord-004862-yv76yvy5	115	10	a	a	DT
cord-004862-yv76yvy5	115	11	circular	circular	JJ
cord-004862-yv76yvy5	115	12	form	form	NN
cord-004862-yv76yvy5	115	13	of	of	IN
cord-004862-yv76yvy5	115	14	L1	L1	NNP
cord-004862-yv76yvy5	115	15	by	by	IN
cord-004862-yv76yvy5	115	16	homologous	homologous	JJ
cord-004862-yv76yvy5	115	17	recombination	recombination	NN
cord-004862-yv76yvy5	115	18	into	into	IN
cord-004862-yv76yvy5	115	19	a	a	DT
cord-004862-yv76yvy5	115	20	GTT(A)7	GTT(A)7	NNP
cord-004862-yv76yvy5	115	21	sequence	sequence	NN
cord-004862-yv76yvy5	115	22	at	at	IN
cord-004862-yv76yvy5	115	23	the	the	DT
cord-004862-yv76yvy5	115	24	target	target	NN
cord-004862-yv76yvy5	115	25	site	site	NN
cord-004862-yv76yvy5	115	26	.	.	.
cord-004862-yv76yvy5	116	1	The	the	DT
cord-004862-yv76yvy5	116	2	structural	structural	JJ
cord-004862-yv76yvy5	116	3	features	feature	NNS
cord-004862-yv76yvy5	116	4	revealed	reveal	VBN
cord-004862-yv76yvy5	116	5	by	by	IN
cord-004862-yv76yvy5	116	6	the	the	DT
cord-004862-yv76yvy5	116	7	alignment	alignment	NN
cord-004862-yv76yvy5	116	8	and	and	CC
cord-004862-yv76yvy5	116	9	comparison	comparison	NN
cord-004862-yv76yvy5	116	10	of	of	IN
cord-004862-yv76yvy5	116	11	the	the	DT
cord-004862-yv76yvy5	116	12	L1	L1	NNP
cord-004862-yv76yvy5	116	13	members	member	NNS
cord-004862-yv76yvy5	116	14	from	from	IN
cord-004862-yv76yvy5	116	15	the	the	DT
cord-004862-yv76yvy5	116	16	rabbit	rabbit	NN
cord-004862-yv76yvy5	116	17	~3	~3	RBS
cord-004862-yv76yvy5	116	18	-	-	HYPH
cord-004862-yv76yvy5	116	19	1ike	1ike	CD
cord-004862-yv76yvy5	116	20	globin	globin	NN
cord-004862-yv76yvy5	116	21	gene	gene	NN
cord-004862-yv76yvy5	116	22	cluster	cluster	NN
cord-004862-yv76yvy5	116	23	are	be	VBP
cord-004862-yv76yvy5	116	24	summarized	summarize	VBN
cord-004862-yv76yvy5	116	25	in	in	IN
cord-004862-yv76yvy5	116	26	Fig	Fig	NNP
cord-004862-yv76yvy5	116	27	.	.	.
cord-004862-yv76yvy5	117	1	3	3	LS
cord-004862-yv76yvy5	117	2	.	.	.
cord-004862-yv76yvy5	118	1	The	the	DT
cord-004862-yv76yvy5	118	2	B	b	NN
cord-004862-yv76yvy5	118	3	,	,	,
cord-004862-yv76yvy5	118	4	E	E	NNP
cord-004862-yv76yvy5	118	5	,	,	,
cord-004862-yv76yvy5	118	6	and	and	CC
cord-004862-yv76yvy5	118	7	D	D	NNP
cord-004862-yv76yvy5	118	8	repeats	repeat	NNS
cord-004862-yv76yvy5	118	9	identified	identify	VBN
cord-004862-yv76yvy5	118	10	by	by	IN
cord-004862-yv76yvy5	118	11	Shen	Shen	NNP
cord-004862-yv76yvy5	118	12	and	and	CC
cord-004862-yv76yvy5	118	13	Maniatis	Maniatis	NNP
cord-004862-yv76yvy5	118	14	(	(	-LRB-
cord-004862-yv76yvy5	118	15	1980	1980	CD
cord-004862-yv76yvy5	118	16	)	)	-RRB-
cord-004862-yv76yvy5	118	17	are	be	VBP
cord-004862-yv76yvy5	118	18	also	also	RB
cord-004862-yv76yvy5	118	19	aligned	align	VBN
cord-004862-yv76yvy5	118	20	with	with	IN
cord-004862-yv76yvy5	118	21	their	-PRON-	PRP$
cord-004862-yv76yvy5	118	22	position	position	NN
cord-004862-yv76yvy5	118	23	in	in	IN
cord-004862-yv76yvy5	118	24	the	the	DT
cord-004862-yv76yvy5	118	25	L10c	l10c	FW
cord-004862-yv76yvy5	118	26	sequence	sequence	NN
cord-004862-yv76yvy5	118	27	.	.	.
cord-004862-yv76yvy5	119	1	The	the	DT
cord-004862-yv76yvy5	119	2	D	d	NN
cord-004862-yv76yvy5	119	3	repeat	repeat	NN
cord-004862-yv76yvy5	119	4	is	be	VBZ
cord-004862-yv76yvy5	119	5	confined	confine	VBN
cord-004862-yv76yvy5	119	6	to	to	IN
cord-004862-yv76yvy5	119	7	the	the	DT
cord-004862-yv76yvy5	119	8	3	3	CD
cord-004862-yv76yvy5	119	9	'	'	POS
cord-004862-yv76yvy5	119	10	untranslated	untranslated	JJ
cord-004862-yv76yvy5	119	11	region	region	NN
cord-004862-yv76yvy5	119	12	,	,	,
cord-004862-yv76yvy5	119	13	whereas	whereas	IN
cord-004862-yv76yvy5	119	14	the	the	DT
cord-004862-yv76yvy5	119	15	B	b	NN
cord-004862-yv76yvy5	119	16	repeat	repeat	NN
cord-004862-yv76yvy5	119	17	and	and	CC
cord-004862-yv76yvy5	119	18	most	most	JJS
cord-004862-yv76yvy5	119	19	of	of	IN
cord-004862-yv76yvy5	119	20	the	the	DT
cord-004862-yv76yvy5	119	21	E	e	NN
cord-004862-yv76yvy5	119	22	repeat	repeat	NN
cord-004862-yv76yvy5	119	23	are	be	VBP
cord-004862-yv76yvy5	119	24	from	from	IN
cord-004862-yv76yvy5	119	25	the	the	DT
cord-004862-yv76yvy5	119	26	ORF	ORF	NNP
cord-004862-yv76yvy5	119	27	region	region	NN
cord-004862-yv76yvy5	119	28	.	.	.
cord-004862-yv76yvy5	120	1	L1Ocl	L1Ocl	NNP
cord-004862-yv76yvy5	120	2	begins	begin	VBZ
cord-004862-yv76yvy5	120	3	immediately	immediately	RB
cord-004862-yv76yvy5	120	4	after	after	IN
cord-004862-yv76yvy5	120	5	the	the	DT
cord-004862-yv76yvy5	120	6	conserved	conserve	VBN
cord-004862-yv76yvy5	120	7	translation	translation	NN
cord-004862-yv76yvy5	120	8	stop	stop	NN
cord-004862-yv76yvy5	120	9	codon	codon	NNP
cord-004862-yv76yvy5	120	10	.	.	.
cord-004862-yv76yvy5	121	1	Figure	figure	NN
cord-004862-yv76yvy5	121	2	3	3	CD
cord-004862-yv76yvy5	121	3	also	also	RB
cord-004862-yv76yvy5	121	4	illustrates	illustrate	VBZ
cord-004862-yv76yvy5	121	5	the	the	DT
cord-004862-yv76yvy5	121	6	internal	internal	JJ
cord-004862-yv76yvy5	121	7	sequence	sequence	NN
cord-004862-yv76yvy5	121	8	rearrangements	rearrangement	NNS
cord-004862-yv76yvy5	121	9	described	describe	VBN
cord-004862-yv76yvy5	121	10	above	above	RB
cord-004862-yv76yvy5	121	11	.	.	.
cord-004862-yv76yvy5	122	1	The	the	DT
cord-004862-yv76yvy5	122	2	diagram	diagram	NN
cord-004862-yv76yvy5	122	3	of	of	IN
cord-004862-yv76yvy5	122	4	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	122	5	repeats	repeat	VBZ
cord-004862-yv76yvy5	122	6	in	in	IN
cord-004862-yv76yvy5	122	7	Fig	Fig	NNP
cord-004862-yv76yvy5	122	8	.	.	.
cord-004862-yv76yvy5	123	1	3	3	CD
cord-004862-yv76yvy5	123	2	shows	show	VBZ
cord-004862-yv76yvy5	123	3	that	that	IN
cord-004862-yv76yvy5	123	4	they	-PRON-	PRP
cord-004862-yv76yvy5	123	5	are	be	VBP
cord-004862-yv76yvy5	123	6	truncated	truncate	VBN
cord-004862-yv76yvy5	123	7	at	at	IN
cord-004862-yv76yvy5	123	8	a	a	DT
cord-004862-yv76yvy5	123	9	variable	variable	JJ
cord-004862-yv76yvy5	123	10	distance	distance	NN
cord-004862-yv76yvy5	123	11	from	from	IN
cord-004862-yv76yvy5	123	12	the	the	DT
cord-004862-yv76yvy5	123	13	5	5	CD
cord-004862-yv76yvy5	123	14	'	'	NN
cord-004862-yv76yvy5	123	15	end	end	NN
cord-004862-yv76yvy5	123	16	of	of	IN
cord-004862-yv76yvy5	123	17	the	the	DT
cord-004862-yv76yvy5	123	18	longest	long	JJS
cord-004862-yv76yvy5	123	19	elements	element	NNS
cord-004862-yv76yvy5	123	20	.	.	.
cord-004862-yv76yvy5	124	1	This	this	DT
cord-004862-yv76yvy5	124	2	truncation	truncation	NN
cord-004862-yv76yvy5	124	3	from	from	IN
cord-004862-yv76yvy5	124	4	the	the	DT
cord-004862-yv76yvy5	124	5	5	5	CD
cord-004862-yv76yvy5	124	6	'	'	''
cord-004862-yv76yvy5	124	7	ends	end	NNS
cord-004862-yv76yvy5	124	8	is	be	VBZ
cord-004862-yv76yvy5	124	9	common	common	JJ
cord-004862-yv76yvy5	124	10	in	in	IN
cord-004862-yv76yvy5	124	11	the	the	DT
cord-004862-yv76yvy5	124	12	whole	whole	JJ
cord-004862-yv76yvy5	124	13	population	population	NN
cord-004862-yv76yvy5	124	14	of	of	IN
cord-004862-yv76yvy5	124	15	LI	LI	NNP
cord-004862-yv76yvy5	124	16	repeats	repeat	VBZ
cord-004862-yv76yvy5	124	17	,	,	,
cord-004862-yv76yvy5	124	18	as	as	IN
cord-004862-yv76yvy5	124	19	demonstrated	demonstrate	VBN
cord-004862-yv76yvy5	124	20	by	by	IN
cord-004862-yv76yvy5	124	21	using	use	VBG
cord-004862-yv76yvy5	124	22	four	four	CD
cord-004862-yv76yvy5	124	23	regions	region	NNS
cord-004862-yv76yvy5	124	24	of	of	IN
cord-004862-yv76yvy5	124	25	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	124	26	as	as	IN
cord-004862-yv76yvy5	124	27	probes	probe	NNS
cord-004862-yv76yvy5	124	28	against	against	IN
cord-004862-yv76yvy5	124	29	the	the	DT
cord-004862-yv76yvy5	124	30	rabbit	rabbit	NN
cord-004862-yv76yvy5	124	31	genomic	genomic	JJ
cord-004862-yv76yvy5	124	32	DNA	DNA	NNP
cord-004862-yv76yvy5	124	33	library	library	NN
cord-004862-yv76yvy5	124	34	in	in	IN
cord-004862-yv76yvy5	124	35	a	a	DT
cord-004862-yv76yvy5	124	36	plaque	plaque	NN
cord-004862-yv76yvy5	124	37	hybridization	hybridization	NN
cord-004862-yv76yvy5	124	38	assay	assay	NN
cord-004862-yv76yvy5	124	39	.	.	.
cord-004862-yv76yvy5	125	1	By	by	IN
cord-004862-yv76yvy5	125	2	counting	count	VBG
cord-004862-yv76yvy5	125	3	the	the	DT
cord-004862-yv76yvy5	125	4	number	number	NN
cord-004862-yv76yvy5	125	5	of	of	IN
cord-004862-yv76yvy5	125	6	plaques	plaque	NNS
cord-004862-yv76yvy5	125	7	that	that	WDT
cord-004862-yv76yvy5	125	8	hybridized	hybridize	VBD
cord-004862-yv76yvy5	125	9	to	to	IN
cord-004862-yv76yvy5	125	10	a	a	DT
cord-004862-yv76yvy5	125	11	given	give	VBN
cord-004862-yv76yvy5	125	12	probe	probe	NN
cord-004862-yv76yvy5	125	13	,	,	,
cord-004862-yv76yvy5	125	14	the	the	DT
cord-004862-yv76yvy5	125	15	approximate	approximate	JJ
cord-004862-yv76yvy5	125	16	copy	copy	NN
cord-004862-yv76yvy5	125	17	number	number	NN
cord-004862-yv76yvy5	125	18	of	of	IN
cord-004862-yv76yvy5	125	19	each	each	DT
cord-004862-yv76yvy5	125	20	region	region	NN
cord-004862-yv76yvy5	125	21	of	of	IN
cord-004862-yv76yvy5	125	22	the	the	DT
cord-004862-yv76yvy5	125	23	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	125	24	repeat	repeat	NN
cord-004862-yv76yvy5	125	25	was	be	VBD
cord-004862-yv76yvy5	125	26	determined	determine	VBN
cord-004862-yv76yvy5	125	27	(	(	-LRB-
cord-004862-yv76yvy5	125	28	see	see	VB
cord-004862-yv76yvy5	125	29	Materials	material	NNS
cord-004862-yv76yvy5	125	30	and	and	CC
cord-004862-yv76yvy5	125	31	Methods	Methods	NNPS
cord-004862-yv76yvy5	125	32	)	)	-RRB-
cord-004862-yv76yvy5	125	33	.	.	.
cord-004862-yv76yvy5	126	1	As	as	IN
cord-004862-yv76yvy5	126	2	shown	show	VBN
cord-004862-yv76yvy5	126	3	in	in	IN
cord-004862-yv76yvy5	126	4	Fig	Fig	NNP
cord-004862-yv76yvy5	126	5	.	.	.
cord-004862-yv76yvy5	127	1	4	4	LS
cord-004862-yv76yvy5	127	2	,	,	,
cord-004862-yv76yvy5	127	3	the	the	DT
cord-004862-yv76yvy5	127	4	5'-most	5'-most	CD
cord-004862-yv76yvy5	127	5	region	region	NN
cord-004862-yv76yvy5	127	6	of	of	IN
cord-004862-yv76yvy5	127	7	LIOc5	LIOc5	NNP
cord-004862-yv76yvy5	127	8	is	be	VBZ
cord-004862-yv76yvy5	127	9	represented	represent	VBN
cord-004862-yv76yvy5	127	10	about	about	IN
cord-004862-yv76yvy5	127	11	11,000	11,000	CD
cord-004862-yv76yvy5	127	12	times	time	NNS
cord-004862-yv76yvy5	127	13	in	in	IN
cord-004862-yv76yvy5	127	14	the	the	DT
cord-004862-yv76yvy5	127	15	haploid	haploid	JJ
cord-004862-yv76yvy5	127	16	genome	genome	NN
cord-004862-yv76yvy5	127	17	of	of	IN
cord-004862-yv76yvy5	127	18	the	the	DT
cord-004862-yv76yvy5	127	19	rabbit	rabbit	NN
cord-004862-yv76yvy5	127	20	,	,	,
cord-004862-yv76yvy5	127	21	and	and	CC
cord-004862-yv76yvy5	127	22	regions	region	NNS
cord-004862-yv76yvy5	127	23	of	of	IN
cord-004862-yv76yvy5	127	24	L1	L1	NNP
cord-004862-yv76yvy5	127	25	located	locate	VBD
cord-004862-yv76yvy5	127	26	more	more	JJR
cord-004862-yv76yvy5	127	27	3	3	CD
cord-004862-yv76yvy5	127	28	'	'	''
cord-004862-yv76yvy5	127	29	are	be	VBP
cord-004862-yv76yvy5	127	30	found	find	VBN
cord-004862-yv76yvy5	127	31	more	more	RBR
cord-004862-yv76yvy5	127	32	frequently	frequently	RB
cord-004862-yv76yvy5	127	33	.	.	.
cord-004862-yv76yvy5	128	1	The	the	DT
cord-004862-yv76yvy5	128	2	largest	large	JJS
cord-004862-yv76yvy5	128	3	increase	increase	NN
cord-004862-yv76yvy5	128	4	in	in	IN
cord-004862-yv76yvy5	128	5	copy	copy	NN
cord-004862-yv76yvy5	128	6	number	number	NN
cord-004862-yv76yvy5	128	7	is	be	VBZ
cord-004862-yv76yvy5	128	8	seen	see	VBN
cord-004862-yv76yvy5	128	9	in	in	IN
cord-004862-yv76yvy5	128	10	the	the	DT
cord-004862-yv76yvy5	128	11	region	region	NN
cord-004862-yv76yvy5	128	12	from	from	IN
cord-004862-yv76yvy5	128	13	positions	position	NNS
cord-004862-yv76yvy5	128	14	4351	4351	CD
cord-004862-yv76yvy5	128	15	to	to	IN
cord-004862-yv76yvy5	128	16	6004	6004	CD
cord-004862-yv76yvy5	128	17	that	that	WDT
cord-004862-yv76yvy5	128	18	includes	include	VBZ
cord-004862-yv76yvy5	128	19	the	the	DT
cord-004862-yv76yvy5	128	20	3	3	CD
cord-004862-yv76yvy5	128	21	'	'	POS
cord-004862-yv76yvy5	128	22	untranslated	untranslated	JJ
cord-004862-yv76yvy5	128	23	region	region	NN
cord-004862-yv76yvy5	128	24	;	;	:
cord-004862-yv76yvy5	128	25	this	this	DT
cord-004862-yv76yvy5	128	26	region	region	NN
cord-004862-yv76yvy5	128	27	is	be	VBZ
cord-004862-yv76yvy5	128	28	represented	represent	VBN
cord-004862-yv76yvy5	128	29	at	at	IN
cord-004862-yv76yvy5	128	30	least	least	RBS
cord-004862-yv76yvy5	128	31	66,000	66,000	CD
cord-004862-yv76yvy5	128	32	times	time	NNS
cord-004862-yv76yvy5	128	33	.	.	.
cord-004862-yv76yvy5	129	1	However	however	RB
cord-004862-yv76yvy5	129	2	,	,	,
cord-004862-yv76yvy5	129	3	the	the	DT
cord-004862-yv76yvy5	129	4	relationship	relationship	NN
cord-004862-yv76yvy5	129	5	between	between	IN
cord-004862-yv76yvy5	129	6	the	the	DT
cord-004862-yv76yvy5	129	7	length	length	NN
cord-004862-yv76yvy5	129	8	of	of	IN
cord-004862-yv76yvy5	129	9	the	the	DT
cord-004862-yv76yvy5	129	10	repeat	repeat	NN
cord-004862-yv76yvy5	129	11	and	and	CC
cord-004862-yv76yvy5	129	12	the	the	DT
cord-004862-yv76yvy5	129	13	copy	copy	NN
cord-004862-yv76yvy5	129	14	number	number	NN
cord-004862-yv76yvy5	129	15	is	be	VBZ
cord-004862-yv76yvy5	129	16	not	not	RB
cord-004862-yv76yvy5	129	17	linear	linear	JJ
cord-004862-yv76yvy5	129	18	;	;	:
cord-004862-yv76yvy5	129	19	only	only	RB
cord-004862-yv76yvy5	129	20	a	a	DT
cord-004862-yv76yvy5	129	21	gradual	gradual	JJ
cord-004862-yv76yvy5	129	22	decrease	decrease	NN
cord-004862-yv76yvy5	129	23	in	in	IN
cord-004862-yv76yvy5	129	24	copy	copy	NN
cord-004862-yv76yvy5	129	25	number	number	NN
cord-004862-yv76yvy5	129	26	is	be	VBZ
cord-004862-yv76yvy5	129	27	observed	observe	VBN
cord-004862-yv76yvy5	129	28	as	as	IN
cord-004862-yv76yvy5	129	29	probes	probe	NNS
cord-004862-yv76yvy5	129	30	going	go	VBG
cord-004862-yv76yvy5	129	31	from	from	IN
cord-004862-yv76yvy5	129	32	position	position	NN
cord-004862-yv76yvy5	129	33	4350	4350	CD
cord-004862-yv76yvy5	129	34	to	to	TO
cord-004862-yv76yvy5	129	35	position	position	VB
cord-004862-yv76yvy5	129	36	1	1	CD
cord-004862-yv76yvy5	129	37	are	be	VBP
cord-004862-yv76yvy5	129	38	used	use	VBN
cord-004862-yv76yvy5	129	39	(	(	-LRB-
cord-004862-yv76yvy5	129	40	Fig	Fig	NNP
cord-004862-yv76yvy5	129	41	.	.	.
cord-004862-yv76yvy5	129	42	4	4	CD
cord-004862-yv76yvy5	129	43	)	)	-RRB-
cord-004862-yv76yvy5	129	44	.	.	.
cord-004862-yv76yvy5	130	1	Therefore	therefore	RB
cord-004862-yv76yvy5	130	2	,	,	,
cord-004862-yv76yvy5	130	3	many	many	JJ
cord-004862-yv76yvy5	130	4	of	of	IN
cord-004862-yv76yvy5	130	5	the	the	DT
cord-004862-yv76yvy5	130	6	L1	L1	NNP
cord-004862-yv76yvy5	130	7	repeats	repeat	NNS
cord-004862-yv76yvy5	130	8	detected	detect	VBN
cord-004862-yv76yvy5	130	9	with	with	IN
cord-004862-yv76yvy5	130	10	the	the	DT
cord-004862-yv76yvy5	130	11	probe	probe	NN
cord-004862-yv76yvy5	130	12	from	from	IN
cord-004862-yv76yvy5	130	13	the	the	DT
cord-004862-yv76yvy5	130	14	5	5	CD
cord-004862-yv76yvy5	130	15	'	'	NN
cord-004862-yv76yvy5	130	16	end	end	NN
cord-004862-yv76yvy5	130	17	may	may	MD
cord-004862-yv76yvy5	130	18	be	be	VB
cord-004862-yv76yvy5	130	19	full	full	JJ
cord-004862-yv76yvy5	130	20	length	length	NN
cord-004862-yv76yvy5	130	21	,	,	,
cord-004862-yv76yvy5	130	22	indicating	indicate	VBG
cord-004862-yv76yvy5	130	23	that	that	IN
cord-004862-yv76yvy5	130	24	up	up	IN
cord-004862-yv76yvy5	130	25	to	to	TO
cord-004862-yv76yvy5	130	26	17	17	CD
cord-004862-yv76yvy5	130	27	%	%	NN
cord-004862-yv76yvy5	130	28	of	of	IN
cord-004862-yv76yvy5	130	29	the	the	DT
cord-004862-yv76yvy5	130	30	population	population	NN
cord-004862-yv76yvy5	130	31	of	of	IN
cord-004862-yv76yvy5	130	32	LIOc	LIOc	NNP
cord-004862-yv76yvy5	130	33	repeats	repeat	NNS
cord-004862-yv76yvy5	130	34	could	could	MD
cord-004862-yv76yvy5	130	35	be	be	VB
cord-004862-yv76yvy5	130	36	full	full	JJ
cord-004862-yv76yvy5	130	37	length	length	NN
cord-004862-yv76yvy5	130	38	.	.	.
cord-004862-yv76yvy5	131	1	This	this	DT
cord-004862-yv76yvy5	131	2	difference	difference	NN
cord-004862-yv76yvy5	131	3	in	in	IN
cord-004862-yv76yvy5	131	4	copy	copy	NN
cord-004862-yv76yvy5	131	5	number	number	NN
cord-004862-yv76yvy5	131	6	at	at	IN
cord-004862-yv76yvy5	131	7	the	the	DT
cord-004862-yv76yvy5	131	8	5	5	CD
cord-004862-yv76yvy5	131	9	'	'	''
cord-004862-yv76yvy5	131	10	and	and	CC
cord-004862-yv76yvy5	131	11	3	3	CD
cord-004862-yv76yvy5	131	12	'	'	POS
cord-004862-yv76yvy5	131	13	ends	end	NNS
cord-004862-yv76yvy5	131	14	of	of	IN
cord-004862-yv76yvy5	131	15	LIOc	LIOc	NNP
cord-004862-yv76yvy5	131	16	repeats	repeat	VBZ
cord-004862-yv76yvy5	131	17	is	be	VBZ
cord-004862-yv76yvy5	131	18	also	also	RB
cord-004862-yv76yvy5	131	19	observed	observe	VBN
cord-004862-yv76yvy5	131	20	when	when	WRB
cord-004862-yv76yvy5	131	21	uncloned	uncloned	JJ
cord-004862-yv76yvy5	131	22	genomic	genomic	JJ
cord-004862-yv76yvy5	131	23	DNA	dna	NN
cord-004862-yv76yvy5	131	24	is	be	VBZ
cord-004862-yv76yvy5	131	25	hybridized	hybridize	VBN
cord-004862-yv76yvy5	131	26	with	with	IN
cord-004862-yv76yvy5	131	27	the	the	DT
cord-004862-yv76yvy5	131	28	different	different	JJ
cord-004862-yv76yvy5	131	29	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	131	30	probes	probe	NNS
cord-004862-yv76yvy5	131	31	(	(	-LRB-
cord-004862-yv76yvy5	131	32	data	datum	NNS
cord-004862-yv76yvy5	131	33	not	not	RB
cord-004862-yv76yvy5	131	34	shown	show	VBN
cord-004862-yv76yvy5	131	35	)	)	-RRB-
cord-004862-yv76yvy5	131	36	.	.	.
cord-004862-yv76yvy5	132	1	Thus	thus	RB
cord-004862-yv76yvy5	132	2	,	,	,
cord-004862-yv76yvy5	132	3	the	the	DT
cord-004862-yv76yvy5	132	4	lower	low	JJR
cord-004862-yv76yvy5	132	5	copy	copy	NN
cord-004862-yv76yvy5	132	6	number	number	NN
cord-004862-yv76yvy5	132	7	at	at	IN
cord-004862-yv76yvy5	132	8	the	the	DT
cord-004862-yv76yvy5	132	9	5	5	CD
cord-004862-yv76yvy5	132	10	'	'	NN
cord-004862-yv76yvy5	132	11	end	end	NN
cord-004862-yv76yvy5	132	12	is	be	VBZ
cord-004862-yv76yvy5	132	13	not	not	RB
cord-004862-yv76yvy5	132	14	a	a	DT
cord-004862-yv76yvy5	132	15	result	result	NN
cord-004862-yv76yvy5	132	16	of	of	IN
cord-004862-yv76yvy5	132	17	underrepresenration	underrepresenration	NN
cord-004862-yv76yvy5	132	18	in	in	IN
cord-004862-yv76yvy5	132	19	the	the	DT
cord-004862-yv76yvy5	132	20	cloned	clone	VBN
cord-004862-yv76yvy5	132	21	genomic	genomic	JJ
cord-004862-yv76yvy5	132	22	library	library	NN
cord-004862-yv76yvy5	132	23	.	.	.
cord-004862-yv76yvy5	133	1	Because	because	IN
cord-004862-yv76yvy5	133	2	the	the	DT
cord-004862-yv76yvy5	133	3	5	5	CD
cord-004862-yv76yvy5	133	4	'	'	NN
cord-004862-yv76yvy5	133	5	end	end	NN
cord-004862-yv76yvy5	133	6	of	of	IN
cord-004862-yv76yvy5	133	7	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	133	8	is	be	VBZ
cord-004862-yv76yvy5	133	9	at	at	IN
cord-004862-yv76yvy5	133	10	the	the	DT
cord-004862-yv76yvy5	133	11	end	end	NN
cord-004862-yv76yvy5	133	12	of	of	IN
cord-004862-yv76yvy5	133	13	the	the	DT
cord-004862-yv76yvy5	133	14	cloned	clone	VBN
cord-004862-yv76yvy5	133	15	portion	portion	NN
cord-004862-yv76yvy5	133	16	of	of	IN
cord-004862-yv76yvy5	133	17	the	the	DT
cord-004862-yv76yvy5	133	18	rabbit/3	rabbit/3	JJ
cord-004862-yv76yvy5	133	19	-	-	HYPH
cord-004862-yv76yvy5	133	20	1ike	1ike	CD
cord-004862-yv76yvy5	133	21	globin	globin	NN
cord-004862-yv76yvy5	133	22	gene	gene	NN
cord-004862-yv76yvy5	133	23	cluster	cluster	NN
cord-004862-yv76yvy5	133	24	,	,	,
cord-004862-yv76yvy5	133	25	it	-PRON-	PRP
cord-004862-yv76yvy5	133	26	is	be	VBZ
cord-004862-yv76yvy5	133	27	likely	likely	JJ
cord-004862-yv76yvy5	133	28	that	that	IN
cord-004862-yv76yvy5	133	29	the	the	DT
cord-004862-yv76yvy5	133	30	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	133	31	sequence	sequence	NN
cord-004862-yv76yvy5	133	32	obtained	obtain	VBN
cord-004862-yv76yvy5	133	33	from	from	IN
cord-004862-yv76yvy5	133	34	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	133	35	is	be	VBZ
cord-004862-yv76yvy5	133	36	not	not	RB
cord-004862-yv76yvy5	133	37	that	that	DT
cord-004862-yv76yvy5	133	38	of	of	IN
cord-004862-yv76yvy5	133	39	a	a	DT
cord-004862-yv76yvy5	133	40	full	full	JJ
cord-004862-yv76yvy5	133	41	-	-	HYPH
cord-004862-yv76yvy5	133	42	length	length	NN
cord-004862-yv76yvy5	133	43	L1	L1	NNP
cord-004862-yv76yvy5	133	44	repeat	repeat	NN
cord-004862-yv76yvy5	133	45	.	.	.
cord-004862-yv76yvy5	134	1	Therefore	therefore	RB
cord-004862-yv76yvy5	134	2	,	,	,
cord-004862-yv76yvy5	134	3	cloned	clone	VBN
cord-004862-yv76yvy5	134	4	subfragments	subfragment	NNS
cord-004862-yv76yvy5	134	5	of	of	IN
cord-004862-yv76yvy5	134	6	L	L	NNP
cord-004862-yv76yvy5	134	7	1	1	CD
cord-004862-yv76yvy5	134	8	Oc5	oc5	NN
cord-004862-yv76yvy5	134	9	were	be	VBD
cord-004862-yv76yvy5	134	10	used	use	VBN
cord-004862-yv76yvy5	134	11	as	as	IN
cord-004862-yv76yvy5	134	12	probes	probe	NNS
cord-004862-yv76yvy5	134	13	against	against	IN
cord-004862-yv76yvy5	134	14	Southern	Southern	NNP
cord-004862-yv76yvy5	134	15	(	(	-LRB-
cord-004862-yv76yvy5	134	16	1975	1975	CD
cord-004862-yv76yvy5	134	17	)	)	-RRB-
cord-004862-yv76yvy5	134	18	blots	blot	NNS
cord-004862-yv76yvy5	134	19	of	of	IN
cord-004862-yv76yvy5	134	20	rabbit	rabbit	NN
cord-004862-yv76yvy5	134	21	genomic	genomic	JJ
cord-004862-yv76yvy5	134	22	DNA	dna	NN
cord-004862-yv76yvy5	134	23	to	to	TO
cord-004862-yv76yvy5	134	24	determine	determine	VB
cord-004862-yv76yvy5	134	25	the	the	DT
cord-004862-yv76yvy5	134	26	average	average	JJ
cord-004862-yv76yvy5	134	27	structure	structure	NN
cord-004862-yv76yvy5	134	28	of	of	IN
cord-004862-yv76yvy5	134	29	full	full	JJ
cord-004862-yv76yvy5	134	30	-	-	HYPH
cord-004862-yv76yvy5	134	31	length	length	NN
cord-004862-yv76yvy5	134	32	rabbit	rabbit	NN
cord-004862-yv76yvy5	134	33	L1	L1	NNP
cord-004862-yv76yvy5	134	34	repeats	repeat	VBZ
cord-004862-yv76yvy5	134	35	.	.	.
cord-004862-yv76yvy5	135	1	Discrete	discrete	JJ
cord-004862-yv76yvy5	135	2	genomic	genomic	JJ
cord-004862-yv76yvy5	135	3	restriction	restriction	NN
cord-004862-yv76yvy5	135	4	fragments	fragment	NNS
cord-004862-yv76yvy5	135	5	detected	detect	VBN
cord-004862-yv76yvy5	135	6	with	with	IN
cord-004862-yv76yvy5	135	7	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	135	8	probes	probe	NNS
cord-004862-yv76yvy5	135	9	were	be	VBD
cord-004862-yv76yvy5	135	10	mapped	map	VBN
cord-004862-yv76yvy5	135	11	by	by	IN
cord-004862-yv76yvy5	135	12	two	two	CD
cord-004862-yv76yvy5	135	13	strategies	strategy	NNS
cord-004862-yv76yvy5	135	14	.	.	.
cord-004862-yv76yvy5	136	1	The	the	DT
cord-004862-yv76yvy5	136	2	portion	portion	NN
cord-004862-yv76yvy5	136	3	of	of	IN
cord-004862-yv76yvy5	136	4	L	L	NNP
cord-004862-yv76yvy5	136	5	1	1	CD
cord-004862-yv76yvy5	136	6	Oc	Oc	NNP
cord-004862-yv76yvy5	136	7	contained	contain	VBD
cord-004862-yv76yvy5	136	8	within	within	IN
cord-004862-yv76yvy5	136	9	the	the	DT
cord-004862-yv76yvy5	136	10	genomic	genomic	JJ
cord-004862-yv76yvy5	136	11	restriction	restriction	NN
cord-004862-yv76yvy5	136	12	fragment	fragment	NN
cord-004862-yv76yvy5	136	13	was	be	VBD
cord-004862-yv76yvy5	136	14	determined	determine	VBN
cord-004862-yv76yvy5	136	15	by	by	IN
cord-004862-yv76yvy5	136	16	which	which	WDT
cord-004862-yv76yvy5	136	17	probes	probe	NNS
cord-004862-yv76yvy5	136	18	from	from	IN
cord-004862-yv76yvy5	136	19	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	136	20	hybridized	hybridize	VBN
cord-004862-yv76yvy5	136	21	to	to	IN
cord-004862-yv76yvy5	136	22	the	the	DT
cord-004862-yv76yvy5	136	23	fragment	fragment	NN
cord-004862-yv76yvy5	136	24	,	,	,
cord-004862-yv76yvy5	136	25	and	and	CC
cord-004862-yv76yvy5	136	26	then	then	RB
cord-004862-yv76yvy5	136	27	the	the	DT
cord-004862-yv76yvy5	136	28	genomic	genomic	JJ
cord-004862-yv76yvy5	136	29	restriction	restriction	NN
cord-004862-yv76yvy5	136	30	fragment	fragment	NN
cord-004862-yv76yvy5	136	31	was	be	VBD
cord-004862-yv76yvy5	136	32	aligned	align	VBN
cord-004862-yv76yvy5	136	33	with	with	IN
cord-004862-yv76yvy5	136	34	conserved	conserved	JJ
cord-004862-yv76yvy5	136	35	restriction	restriction	NN
cord-004862-yv76yvy5	136	36	sites	site	NNS
cord-004862-yv76yvy5	136	37	found	find	VBN
cord-004862-yv76yvy5	136	38	in	in	IN
cord-004862-yv76yvy5	136	39	the	the	DT
cord-004862-yv76yvy5	136	40	cloned	clone	VBN
cord-004862-yv76yvy5	136	41	LI	LI	NNP
cord-004862-yv76yvy5	136	42	Oc	Oc	NNP
cord-004862-yv76yvy5	136	43	DNA	DNA	NNP
cord-004862-yv76yvy5	136	44	.	.	.
cord-004862-yv76yvy5	137	1	This	this	DT
cord-004862-yv76yvy5	137	2	analysis	analysis	NN
cord-004862-yv76yvy5	137	3	is	be	VBZ
cord-004862-yv76yvy5	137	4	presented	present	VBN
cord-004862-yv76yvy5	137	5	in	in	IN
cord-004862-yv76yvy5	137	6	detail	detail	NN
cord-004862-yv76yvy5	137	7	in	in	IN
cord-004862-yv76yvy5	137	8	Demers	Demers	NNP
cord-004862-yv76yvy5	137	9	(	(	-LRB-
cord-004862-yv76yvy5	137	10	1987	1987	CD
cord-004862-yv76yvy5	137	11	)	)	-RRB-
cord-004862-yv76yvy5	137	12	,	,	,
cord-004862-yv76yvy5	137	13	and	and	CC
cord-004862-yv76yvy5	137	14	the	the	DT
cord-004862-yv76yvy5	137	15	portion	portion	NN
cord-004862-yv76yvy5	137	16	relevant	relevant	JJ
cord-004862-yv76yvy5	137	17	to	to	IN
cord-004862-yv76yvy5	137	18	the	the	DT
cord-004862-yv76yvy5	137	19	5	5	CD
cord-004862-yv76yvy5	137	20	'	'	NN
cord-004862-yv76yvy5	137	21	end	end	NN
cord-004862-yv76yvy5	137	22	of	of	IN
cord-004862-yv76yvy5	137	23	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	137	24	is	be	VBZ
cord-004862-yv76yvy5	137	25	summarized	summarize	VBN
cord-004862-yv76yvy5	137	26	in	in	IN
cord-004862-yv76yvy5	137	27	Fig	Fig	NNP
cord-004862-yv76yvy5	137	28	Seal	Seal	NNP
cord-004862-yv76yvy5	137	29	2.1	2.1	CD
cord-004862-yv76yvy5	137	30	Sphl	Sphl	NNP
cord-004862-yv76yvy5	137	31	1.9	1.9	CD
cord-004862-yv76yvy5	137	32	Xmnl	Xmnl	NNP
cord-004862-yv76yvy5	137	33	3.7	3.7	CD
cord-004862-yv76yvy5	137	34	The	the	DT
cord-004862-yv76yvy5	137	35	longest	long	JJS
cord-004862-yv76yvy5	137	36	restriction	restriction	NN
cord-004862-yv76yvy5	137	37	fragment	fragment	NN
cord-004862-yv76yvy5	137	38	extending	extend	VBG
cord-004862-yv76yvy5	137	39	5	5	CD
cord-004862-yv76yvy5	137	40	'	'	''
cord-004862-yv76yvy5	137	41	to	to	IN
cord-004862-yv76yvy5	137	42	the	the	DT
cord-004862-yv76yvy5	137	43	cloned	clone	VBN
cord-004862-yv76yvy5	137	44	end	end	NN
cord-004862-yv76yvy5	137	45	of	of	IN
cord-004862-yv76yvy5	137	46	L	l	NN
cord-004862-yv76yvy5	137	47	1	1	CD
cord-004862-yv76yvy5	137	48	Oc5	oc5	NN
cord-004862-yv76yvy5	137	49	is	be	VBZ
cord-004862-yv76yvy5	137	50	the	the	DT
cord-004862-yv76yvy5	137	51	PstI	PstI	NNP
cord-004862-yv76yvy5	137	52	4.0-kb	4.0-kb	CD
cord-004862-yv76yvy5	137	53	fragment	fragment	NN
cord-004862-yv76yvy5	137	54	that	that	WDT
cord-004862-yv76yvy5	137	55	ends	end	VBZ
cord-004862-yv76yvy5	137	56	1	1	CD
cord-004862-yv76yvy5	137	57	kb	kb	NNP
cord-004862-yv76yvy5	137	58	5	5	CD
cord-004862-yv76yvy5	137	59	'	'	''
cord-004862-yv76yvy5	137	60	to	to	IN
cord-004862-yv76yvy5	137	61	the	the	DT
cord-004862-yv76yvy5	137	62	cloned	clone	VBN
cord-004862-yv76yvy5	137	63	region	region	NN
cord-004862-yv76yvy5	137	64	of	of	IN
cord-004862-yv76yvy5	137	65	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	137	66	(	(	-LRB-
cord-004862-yv76yvy5	137	67	Fig	fig	NN
cord-004862-yv76yvy5	137	68	.	.	.
cord-004862-yv76yvy5	137	69	  	  	_SP
cord-004862-yv76yvy5	137	70	5	5	CD
cord-004862-yv76yvy5	137	71	)	)	-RRB-
cord-004862-yv76yvy5	137	72	.	.	.
cord-004862-yv76yvy5	138	1	The	the	DT
cord-004862-yv76yvy5	138	2	ScaI	ScaI	NNP
cord-004862-yv76yvy5	138	3	2.1-kb	2.1-kb	CD
cord-004862-yv76yvy5	138	4	,	,	,
cord-004862-yv76yvy5	138	5	SphI	SphI	NNP
cord-004862-yv76yvy5	138	6	1.9-kb	1.9-kb	CD
cord-004862-yv76yvy5	138	7	,	,	,
cord-004862-yv76yvy5	138	8	and	and	CC
cord-004862-yv76yvy5	138	9	XmnI	XmnI	NNP
cord-004862-yv76yvy5	138	10	3.7-kb	3.7-kb	CD
cord-004862-yv76yvy5	138	11	genomic	genomic	JJ
cord-004862-yv76yvy5	138	12	fragments	fragment	NNS
cord-004862-yv76yvy5	138	13	all	all	DT
cord-004862-yv76yvy5	138	14	have	have	VBP
cord-004862-yv76yvy5	138	15	5	5	CD
cord-004862-yv76yvy5	138	16	'	'	''
cord-004862-yv76yvy5	138	17	ends	end	NNS
cord-004862-yv76yvy5	138	18	between	between	IN
cord-004862-yv76yvy5	138	19	the	the	DT
cord-004862-yv76yvy5	138	20	conserved	conserve	VBN
cord-004862-yv76yvy5	138	21	PstI	PstI	NNP
cord-004862-yv76yvy5	138	22	site	site	NN
cord-004862-yv76yvy5	138	23	located	locate	VBN
cord-004862-yv76yvy5	138	24	outside	outside	IN
cord-004862-yv76yvy5	138	25	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	138	26	and	and	CC
cord-004862-yv76yvy5	138	27	the	the	DT
cord-004862-yv76yvy5	138	28	5	5	CD
cord-004862-yv76yvy5	138	29	'	'	NN
cord-004862-yv76yvy5	138	30	end	end	NN
cord-004862-yv76yvy5	138	31	of	of	IN
cord-004862-yv76yvy5	138	32	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	138	33	(	(	-LRB-
cord-004862-yv76yvy5	138	34	Fig	fig	NN
cord-004862-yv76yvy5	138	35	.	.	.
cord-004862-yv76yvy5	138	36	5	5	CD
cord-004862-yv76yvy5	138	37	)	)	-RRB-
cord-004862-yv76yvy5	138	38	.	.	.
cord-004862-yv76yvy5	139	1	These	these	DT
cord-004862-yv76yvy5	139	2	data	datum	NNS
cord-004862-yv76yvy5	139	3	indicate	indicate	VBP
cord-004862-yv76yvy5	139	4	that	that	IN
cord-004862-yv76yvy5	139	5	fulllength	fulllength	NN
cord-004862-yv76yvy5	139	6	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	139	7	repeats	repeat	VBZ
cord-004862-yv76yvy5	139	8	wiI1	wii1	NN
cord-004862-yv76yvy5	139	9	extend	extend	VBP
cord-004862-yv76yvy5	139	10	at	at	IN
cord-004862-yv76yvy5	139	11	least	least	JJS
cord-004862-yv76yvy5	139	12	1	1	CD
cord-004862-yv76yvy5	139	13	kb	kb	NNP
cord-004862-yv76yvy5	139	14	further	further	RB
cord-004862-yv76yvy5	139	15	5	5	CD
cord-004862-yv76yvy5	139	16	'	'	''
cord-004862-yv76yvy5	139	17	than	than	IN
cord-004862-yv76yvy5	139	18	the	the	DT
cord-004862-yv76yvy5	139	19	sequenced	sequence	VBN
cord-004862-yv76yvy5	139	20	portion	portion	NN
cord-004862-yv76yvy5	139	21	of	of	IN
cord-004862-yv76yvy5	139	22	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	139	23	.	.	.
cord-004862-yv76yvy5	140	1	Several	several	JJ
cord-004862-yv76yvy5	140	2	clones	clone	NNS
cord-004862-yv76yvy5	140	3	from	from	IN
cord-004862-yv76yvy5	140	4	the	the	DT
cord-004862-yv76yvy5	140	5	rabbit	rabbit	NN
cord-004862-yv76yvy5	140	6	genomic	genomic	JJ
cord-004862-yv76yvy5	140	7	DNA	dna	NN
cord-004862-yv76yvy5	140	8	library	library	NN
cord-004862-yv76yvy5	140	9	are	be	VBP
cord-004862-yv76yvy5	140	10	currently	currently	RB
cord-004862-yv76yvy5	140	11	being	be	VBG
cord-004862-yv76yvy5	140	12	studied	study	VBN
cord-004862-yv76yvy5	140	13	in	in	IN
cord-004862-yv76yvy5	140	14	order	order	NN
cord-004862-yv76yvy5	140	15	to	to	TO
cord-004862-yv76yvy5	140	16	determine	determine	VB
cord-004862-yv76yvy5	140	17	the	the	DT
cord-004862-yv76yvy5	140	18	5	5	CD
cord-004862-yv76yvy5	140	19	'	'	NN
cord-004862-yv76yvy5	140	20	end	end	NN
cord-004862-yv76yvy5	140	21	of	of	IN
cord-004862-yv76yvy5	140	22	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	140	23	repeats	repeat	VBZ
cord-004862-yv76yvy5	140	24	.	.	.
cord-004862-yv76yvy5	141	1	The	the	DT
cord-004862-yv76yvy5	141	2	sequence	sequence	NN
cord-004862-yv76yvy5	141	3	of	of	IN
cord-004862-yv76yvy5	141	4	the	the	DT
cord-004862-yv76yvy5	141	5	rabbit	rabbit	NN
cord-004862-yv76yvy5	141	6	L1	L1	NNP
cord-004862-yv76yvy5	141	7	repeat	repeat	NN
cord-004862-yv76yvy5	141	8	was	be	VBD
cord-004862-yv76yvy5	141	9	compared	compare	VBN
cord-004862-yv76yvy5	141	10	with	with	IN
cord-004862-yv76yvy5	141	11	the	the	DT
cord-004862-yv76yvy5	141	12	sequences	sequence	NNS
cord-004862-yv76yvy5	141	13	of	of	IN
cord-004862-yv76yvy5	141	14	the	the	DT
cord-004862-yv76yvy5	141	15	mouse	mouse	NN
cord-004862-yv76yvy5	141	16	and	and	CC
cord-004862-yv76yvy5	141	17	human	human	NN
cord-004862-yv76yvy5	141	18	LI	LI	NNP
cord-004862-yv76yvy5	142	1	repeats	repeat	NNS
cord-004862-yv76yvy5	142	2	by	by	IN
cord-004862-yv76yvy5	142	3	dot	dot	NN
cord-004862-yv76yvy5	142	4	-	-	HYPH
cord-004862-yv76yvy5	142	5	plots	plot	NNS
cord-004862-yv76yvy5	142	6	and	and	CC
cord-004862-yv76yvy5	142	7	by	by	IN
cord-004862-yv76yvy5	142	8	sequence	sequence	NN
cord-004862-yv76yvy5	142	9	alignments	alignment	NNS
cord-004862-yv76yvy5	142	10	.	.	.
cord-004862-yv76yvy5	143	1	The	the	DT
cord-004862-yv76yvy5	143	2	dot	dot	NN
cord-004862-yv76yvy5	143	3	-	-	HYPH
cord-004862-yv76yvy5	143	4	plot	plot	NN
cord-004862-yv76yvy5	143	5	analyses	analysis	NNS
cord-004862-yv76yvy5	143	6	in	in	IN
cord-004862-yv76yvy5	143	7	Fig	Fig	NNP
cord-004862-yv76yvy5	143	8	.	.	.
cord-004862-yv76yvy5	144	1	6	6	CD
cord-004862-yv76yvy5	144	2	show	show	VBP
cord-004862-yv76yvy5	144	3	that	that	IN
cord-004862-yv76yvy5	144	4	the	the	DT
cord-004862-yv76yvy5	144	5	internal	internal	JJ
cord-004862-yv76yvy5	144	6	sequence	sequence	NN
cord-004862-yv76yvy5	144	7	of	of	IN
cord-004862-yv76yvy5	144	8	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	144	9	is	be	VBZ
cord-004862-yv76yvy5	144	10	very	very	RB
cord-004862-yv76yvy5	144	11	similar	similar	JJ
cord-004862-yv76yvy5	144	12	to	to	IN
cord-004862-yv76yvy5	144	13	both	both	DT
cord-004862-yv76yvy5	144	14	L1Md	L1Md	NNPS
cord-004862-yv76yvy5	144	15	(	(	-LRB-
cord-004862-yv76yvy5	144	16	mouse	mouse	NN
cord-004862-yv76yvy5	144	17	)	)	-RRB-
cord-004862-yv76yvy5	144	18	and	and	CC
cord-004862-yv76yvy5	144	19	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	144	20	(	(	-LRB-
cord-004862-yv76yvy5	144	21	human	human	NN
cord-004862-yv76yvy5	144	22	)	)	-RRB-
cord-004862-yv76yvy5	144	23	over	over	IN
cord-004862-yv76yvy5	144	24	very	very	RB
cord-004862-yv76yvy5	144	25	long	long	JJ
cord-004862-yv76yvy5	144	26	segments	segment	NNS
cord-004862-yv76yvy5	144	27	,	,	,
cord-004862-yv76yvy5	144	28	whereas	whereas	IN
cord-004862-yv76yvy5	144	29	the	the	DT
cord-004862-yv76yvy5	144	30	5	5	CD
cord-004862-yv76yvy5	144	31	'	'	''
cord-004862-yv76yvy5	144	32	and	and	CC
cord-004862-yv76yvy5	144	33	3	3	CD
cord-004862-yv76yvy5	144	34	'	'	POS
cord-004862-yv76yvy5	144	35	ends	end	NNS
cord-004862-yv76yvy5	144	36	are	be	VBP
cord-004862-yv76yvy5	144	37	not	not	RB
cord-004862-yv76yvy5	144	38	conserved	conserve	VBN
cord-004862-yv76yvy5	144	39	between	between	IN
cord-004862-yv76yvy5	144	40	species	specie	NNS
cord-004862-yv76yvy5	144	41	.	.	.
cord-004862-yv76yvy5	145	1	The	the	DT
cord-004862-yv76yvy5	145	2	internal	internal	JJ
cord-004862-yv76yvy5	145	3	region	region	NN
cord-004862-yv76yvy5	145	4	of	of	IN
cord-004862-yv76yvy5	145	5	sequence	sequence	NN
cord-004862-yv76yvy5	145	6	similarity	similarity	NN
cord-004862-yv76yvy5	145	7	of	of	IN
cord-004862-yv76yvy5	145	8	about	about	IN
cord-004862-yv76yvy5	145	9	4.5	4.5	CD
cord-004862-yv76yvy5	145	10	kb	kb	NNP
cord-004862-yv76yvy5	145	11	is	be	VBZ
cord-004862-yv76yvy5	145	12	divided	divide	VBN
cord-004862-yv76yvy5	145	13	into	into	IN
cord-004862-yv76yvy5	145	14	two	two	CD
cord-004862-yv76yvy5	145	15	pans	pan	NNS
cord-004862-yv76yvy5	145	16	,	,	,
cord-004862-yv76yvy5	145	17	a	a	DT
cord-004862-yv76yvy5	145	18	short	short	JJ
cord-004862-yv76yvy5	145	19	region	region	NN
cord-004862-yv76yvy5	145	20	of	of	IN
cord-004862-yv76yvy5	145	21	similarity	similarity	NN
cord-004862-yv76yvy5	145	22	of	of	IN
cord-004862-yv76yvy5	145	23	about	about	RB
cord-004862-yv76yvy5	145	24	300	300	CD
cord-004862-yv76yvy5	145	25	bp	bp	NNP
cord-004862-yv76yvy5	145	26	followed	follow	VBN
cord-004862-yv76yvy5	145	27	by	by	IN
cord-004862-yv76yvy5	145	28	a	a	DT
cord-004862-yv76yvy5	145	29	very	very	RB
cord-004862-yv76yvy5	145	30	long	long	JJ
cord-004862-yv76yvy5	145	31	segment	segment	NN
cord-004862-yv76yvy5	145	32	of	of	IN
cord-004862-yv76yvy5	145	33	similarity	similarity	NN
cord-004862-yv76yvy5	145	34	.	.	.
cord-004862-yv76yvy5	146	1	The	the	DT
cord-004862-yv76yvy5	146	2	long	long	JJ
cord-004862-yv76yvy5	146	3	segments	segment	NNS
cord-004862-yv76yvy5	146	4	of	of	IN
cord-004862-yv76yvy5	146	5	internal	internal	JJ
cord-004862-yv76yvy5	146	6	similarity	similarity	NN
cord-004862-yv76yvy5	146	7	are	be	VBP
cord-004862-yv76yvy5	146	8	in	in	IN
cord-004862-yv76yvy5	146	9	the	the	DT
cord-004862-yv76yvy5	146	10	portion	portion	NN
cord-004862-yv76yvy5	146	11	of	of	IN
cord-004862-yv76yvy5	146	12	L	l	NN
cord-004862-yv76yvy5	146	13	1	1	CD
cord-004862-yv76yvy5	146	14	that	that	WDT
cord-004862-yv76yvy5	146	15	encodes	encode	VBZ
cord-004862-yv76yvy5	146	16	open	open	JJ
cord-004862-yv76yvy5	146	17	reading	reading	NN
cord-004862-yv76yvy5	146	18	frames	frame	NNS
cord-004862-yv76yvy5	146	19	(	(	-LRB-
cord-004862-yv76yvy5	146	20	ORFs	ORFs	NNP
cord-004862-yv76yvy5	146	21	)	)	-RRB-
cord-004862-yv76yvy5	146	22	.	.	.
cord-004862-yv76yvy5	147	1	The	the	DT
cord-004862-yv76yvy5	147	2	ORFs	orfs	NN
cord-004862-yv76yvy5	147	3	found	find	VBD
cord-004862-yv76yvy5	147	4	in	in	IN
cord-004862-yv76yvy5	147	5	the	the	DT
cord-004862-yv76yvy5	147	6	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	147	7	sequence	sequence	NN
cord-004862-yv76yvy5	147	8	are	be	VBP
cord-004862-yv76yvy5	147	9	shown	show	VBN
cord-004862-yv76yvy5	147	10	in	in	IN
cord-004862-yv76yvy5	147	11	Fig	Fig	NNP
cord-004862-yv76yvy5	147	12	.	.	.
cord-004862-yv76yvy5	148	1	7	7	CD
cord-004862-yv76yvy5	148	2	,	,	,
cord-004862-yv76yvy5	148	3	along	along	IN
cord-004862-yv76yvy5	148	4	with	with	IN
cord-004862-yv76yvy5	148	5	a	a	DT
cord-004862-yv76yvy5	148	6	comparison	comparison	NN
cord-004862-yv76yvy5	148	7	of	of	IN
cord-004862-yv76yvy5	148	8	the	the	DT
cord-004862-yv76yvy5	148	9	ORFs	ORFs	NNP
cord-004862-yv76yvy5	148	10	from	from	IN
cord-004862-yv76yvy5	148	11	L1Md	L1Md	NNP
cord-004862-yv76yvy5	148	12	.	.	.
cord-004862-yv76yvy5	149	1	The	the	DT
cord-004862-yv76yvy5	149	2	mouse	mouse	NN
cord-004862-yv76yvy5	149	3	LIMdA2	LIMdA2	NNP
cord-004862-yv76yvy5	149	4	sequence	sequence	NN
cord-004862-yv76yvy5	149	5	contains	contain	VBZ
cord-004862-yv76yvy5	149	6	two	two	CD
cord-004862-yv76yvy5	149	7	ORFs	orf	NNS
cord-004862-yv76yvy5	149	8	,	,	,
cord-004862-yv76yvy5	149	9	one	one	CD
cord-004862-yv76yvy5	149	10	of	of	IN
cord-004862-yv76yvy5	149	11	1137	1137	CD
cord-004862-yv76yvy5	149	12	nucleotides	nucleotide	NNS
cord-004862-yv76yvy5	149	13	(	(	-LRB-
cord-004862-yv76yvy5	149	14	top	top	JJ
cord-004862-yv76yvy5	149	15	strand	strand	NN
cord-004862-yv76yvy5	149	16	,	,	,
cord-004862-yv76yvy5	149	17	N	n	CD
cord-004862-yv76yvy5	149	18	frame	frame	NN
cord-004862-yv76yvy5	149	19	in	in	IN
cord-004862-yv76yvy5	149	20	Fig	Fig	NNP
cord-004862-yv76yvy5	149	21	.	.	NNP
cord-004862-yv76yvy5	149	22	7	7	CD
cord-004862-yv76yvy5	149	23	,	,	,
cord-004862-yv76yvy5	149	24	bottom	bottom	JJ
cord-004862-yv76yvy5	149	25	panel	panel	NN
cord-004862-yv76yvy5	149	26	)	)	-RRB-
cord-004862-yv76yvy5	149	27	and	and	CC
cord-004862-yv76yvy5	149	28	one	one	CD
cord-004862-yv76yvy5	149	29	of	of	IN
cord-004862-yv76yvy5	149	30	3900	3900	CD
cord-004862-yv76yvy5	149	31	nucleotides	nucleotide	NNS
cord-004862-yv76yvy5	149	32	(	(	-LRB-
cord-004862-yv76yvy5	149	33	top	top	JJ
cord-004862-yv76yvy5	149	34	strand	strand	NN
cord-004862-yv76yvy5	149	35	,	,	,
cord-004862-yv76yvy5	149	36	N	n	NN
cord-004862-yv76yvy5	149	37	+	+	SYM
cord-004862-yv76yvy5	149	38	1	1	CD
cord-004862-yv76yvy5	149	39	frame	frame	NN
cord-004862-yv76yvy5	149	40	in	in	IN
cord-004862-yv76yvy5	149	41	Fig	Fig	NNP
cord-004862-yv76yvy5	149	42	.	.	.
cord-004862-yv76yvy5	149	43	  	  	_SP
cord-004862-yv76yvy5	150	1	7	7	LS
cord-004862-yv76yvy5	150	2	)	)	-RRB-
cord-004862-yv76yvy5	150	3	,	,	,
cord-004862-yv76yvy5	150	4	that	that	WDT
cord-004862-yv76yvy5	150	5	overlap	overlap	VBP
cord-004862-yv76yvy5	150	6	by	by	IN
cord-004862-yv76yvy5	150	7	14	14	CD
cord-004862-yv76yvy5	150	8	nucleotides	nucleotide	NNS
cord-004862-yv76yvy5	150	9	)	)	-RRB-
cord-004862-yv76yvy5	150	10	.	.	.
cord-004862-yv76yvy5	151	1	Seven	seven	CD
cord-004862-yv76yvy5	151	2	open	open	JJ
cord-004862-yv76yvy5	151	3	reading	reading	NN
cord-004862-yv76yvy5	151	4	blocks	block	NNS
cord-004862-yv76yvy5	151	5	are	be	VBP
cord-004862-yv76yvy5	151	6	in	in	IN
cord-004862-yv76yvy5	151	7	the	the	DT
cord-004862-yv76yvy5	151	8	rabbit	rabbit	NN
cord-004862-yv76yvy5	151	9	L1Oc5	l1oc5	NN
cord-004862-yv76yvy5	151	10	sequence	sequence	NN
cord-004862-yv76yvy5	151	11	in	in	IN
cord-004862-yv76yvy5	151	12	frames	frame	NNS
cord-004862-yv76yvy5	151	13	N	N	NNP
cord-004862-yv76yvy5	151	14	,	,	,
cord-004862-yv76yvy5	151	15	N	n	CD
cord-004862-yv76yvy5	151	16	+	+	SYM
cord-004862-yv76yvy5	151	17	1	1	CD
cord-004862-yv76yvy5	151	18	,	,	,
cord-004862-yv76yvy5	151	19	and	and	CC
cord-004862-yv76yvy5	152	1	N	n	NN
cord-004862-yv76yvy5	152	2	+	+	SYM
cord-004862-yv76yvy5	152	3	2	2	CD
cord-004862-yv76yvy5	152	4	(	(	-LRB-
cord-004862-yv76yvy5	152	5	Fig	Fig	NNP
cord-004862-yv76yvy5	152	6	.	.	NNP
cord-004862-yv76yvy5	152	7	7	7	CD
cord-004862-yv76yvy5	152	8	,	,	,
cord-004862-yv76yvy5	152	9	top	top	JJ
cord-004862-yv76yvy5	152	10	panel	panel	NN
cord-004862-yv76yvy5	152	11	)	)	-RRB-
cord-004862-yv76yvy5	152	12	.	.	.
cord-004862-yv76yvy5	153	1	The	the	DT
cord-004862-yv76yvy5	153	2	bar	bar	NN
cord-004862-yv76yvy5	153	3	between	between	IN
cord-004862-yv76yvy5	153	4	the	the	DT
cord-004862-yv76yvy5	153	5	stop	stop	NN
cord-004862-yv76yvy5	153	6	codon	codon	NN
cord-004862-yv76yvy5	153	7	maps	map	NNS
cord-004862-yv76yvy5	153	8	of	of	IN
cord-004862-yv76yvy5	153	9	each	each	DT
cord-004862-yv76yvy5	153	10	species	specie	NNS
cord-004862-yv76yvy5	153	11	shows	show	VBZ
cord-004862-yv76yvy5	153	12	the	the	DT
cord-004862-yv76yvy5	153	13	regions	region	NNS
cord-004862-yv76yvy5	153	14	of	of	IN
cord-004862-yv76yvy5	153	15	similarity	similarity	NN
cord-004862-yv76yvy5	153	16	(	(	-LRB-
cord-004862-yv76yvy5	153	17	Fig	Fig	NNP
cord-004862-yv76yvy5	153	18	.	.	.
cord-004862-yv76yvy5	153	19	 	 	_SP
cord-004862-yv76yvy5	153	20	6	6	CD
cord-004862-yv76yvy5	153	21	)	)	-RRB-
cord-004862-yv76yvy5	153	22	as	as	IN
cord-004862-yv76yvy5	153	23	filled	fill	VBN
cord-004862-yv76yvy5	153	24	boxes	box	NNS
cord-004862-yv76yvy5	153	25	.	.	.
cord-004862-yv76yvy5	154	1	It	-PRON-	PRP
cord-004862-yv76yvy5	154	2	is	be	VBZ
cord-004862-yv76yvy5	154	3	apparent	apparent	JJ
cord-004862-yv76yvy5	154	4	that	that	IN
cord-004862-yv76yvy5	154	5	the	the	DT
cord-004862-yv76yvy5	154	6	regions	region	NNS
cord-004862-yv76yvy5	154	7	of	of	IN
cord-004862-yv76yvy5	154	8	L1	L1	NNP
cord-004862-yv76yvy5	154	9	that	that	WDT
cord-004862-yv76yvy5	154	10	are	be	VBP
cord-004862-yv76yvy5	154	11	similar	similar	JJ
cord-004862-yv76yvy5	154	12	between	between	IN
cord-004862-yv76yvy5	154	13	species	specie	NNS
cord-004862-yv76yvy5	154	14	contain	contain	VBP
cord-004862-yv76yvy5	154	15	extensive	extensive	JJ
cord-004862-yv76yvy5	154	16	ORFs	orfs	NN
cord-004862-yv76yvy5	154	17	,	,	,
cord-004862-yv76yvy5	154	18	although	although	IN
cord-004862-yv76yvy5	154	19	the	the	DT
cord-004862-yv76yvy5	154	20	ORFs	ORFs	NNP
cord-004862-yv76yvy5	154	21	at	at	IN
cord-004862-yv76yvy5	154	22	the	the	DT
cord-004862-yv76yvy5	154	23	5	5	CD
cord-004862-yv76yvy5	154	24	'	'	NN
cord-004862-yv76yvy5	154	25	end	end	NN
cord-004862-yv76yvy5	154	26	are	be	VBP
cord-004862-yv76yvy5	154	27	not	not	RB
cord-004862-yv76yvy5	154	28	similar	similar	JJ
cord-004862-yv76yvy5	154	29	between	between	IN
cord-004862-yv76yvy5	154	30	species	specie	NNS
cord-004862-yv76yvy5	154	31	.	.	.
cord-004862-yv76yvy5	155	1	Rabbit	Rabbit	NNP
cord-004862-yv76yvy5	155	2	L1	L1	NNP
cord-004862-yv76yvy5	155	3	repeats	repeat	NNS
cord-004862-yv76yvy5	155	4	have	have	VBP
cord-004862-yv76yvy5	155	5	only	only	RB
cord-004862-yv76yvy5	155	6	two	two	CD
cord-004862-yv76yvy5	155	7	major	major	JJ
cord-004862-yv76yvy5	155	8	ORFs	orfs	NN
cord-004862-yv76yvy5	155	9	.	.	.
cord-004862-yv76yvy5	156	1	Although	although	IN
cord-004862-yv76yvy5	156	2	the	the	DT
cord-004862-yv76yvy5	156	3	data	datum	NNS
cord-004862-yv76yvy5	156	4	in	in	IN
cord-004862-yv76yvy5	156	5	Fig	Fig	NNP
cord-004862-yv76yvy5	156	6	.	.	.
cord-004862-yv76yvy5	156	7	7	7	CD
cord-004862-yv76yvy5	156	8	show	show	VBP
cord-004862-yv76yvy5	156	9	that	that	IN
cord-004862-yv76yvy5	156	10	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	156	11	has	have	VBZ
cord-004862-yv76yvy5	156	12	several	several	JJ
cord-004862-yv76yvy5	156	13	ORFs	orf	NNS
cord-004862-yv76yvy5	156	14	,	,	,
cord-004862-yv76yvy5	156	15	they	-PRON-	PRP
cord-004862-yv76yvy5	156	16	are	be	VBP
cord-004862-yv76yvy5	156	17	probably	probably	RB
cord-004862-yv76yvy5	156	18	derived	derive	VBN
cord-004862-yv76yvy5	156	19	from	from	IN
cord-004862-yv76yvy5	156	20	longer	long	JJR
cord-004862-yv76yvy5	156	21	reading	read	VBG
cord-004862-yv76yvy5	156	22	frames	frame	NNS
cord-004862-yv76yvy5	156	23	in	in	IN
cord-004862-yv76yvy5	156	24	the	the	DT
cord-004862-yv76yvy5	156	25	ancestral	ancestral	JJ
cord-004862-yv76yvy5	156	26	L1	L1	NNP
cord-004862-yv76yvy5	156	27	sequence	sequence	NN
cord-004862-yv76yvy5	156	28	.	.	.
cord-004862-yv76yvy5	157	1	The	the	DT
cord-004862-yv76yvy5	157	2	Fig	Fig	NNP
cord-004862-yv76yvy5	157	3	.	.	NNP
cord-004862-yv76yvy5	157	4	9	9	CD
cord-004862-yv76yvy5	157	5	.	.	.
cord-004862-yv76yvy5	158	1	Sequence	sequence	NN
cord-004862-yv76yvy5	158	2	similarities	similarity	NNS
cord-004862-yv76yvy5	158	3	in	in	IN
cord-004862-yv76yvy5	158	4	the	the	DT
cord-004862-yv76yvy5	158	5	ORF-	ORF-	NNP
cord-004862-yv76yvy5	158	6	!	!	.
cord-004862-yv76yvy5	158	7	region	region	NN
cord-004862-yv76yvy5	158	8	.	.	.
cord-004862-yv76yvy5	159	1	The	the	DT
cord-004862-yv76yvy5	159	2	L]Oc	L]Oc	NNP
cord-004862-yv76yvy5	159	3	ORF	ORF	NNP
cord-004862-yv76yvy5	159	4	-	-	:
cord-004862-yv76yvy5	159	5	I	I	NNP
cord-004862-yv76yvy5	159	6	region	region	NN
cord-004862-yv76yvy5	159	7	is	be	VBZ
cord-004862-yv76yvy5	159	8	shown	show	VBN
cord-004862-yv76yvy5	159	9	as	as	IN
cord-004862-yv76yvy5	159	10	a	a	DT
cord-004862-yv76yvy5	159	11	black	black	JJ
cord-004862-yv76yvy5	159	12	box	box	NN
cord-004862-yv76yvy5	159	13	,	,	,
cord-004862-yv76yvy5	159	14	numbered	number	VBN
cord-004862-yv76yvy5	159	15	according	accord	VBG
cord-004862-yv76yvy5	159	16	to	to	IN
cord-004862-yv76yvy5	159	17	the	the	DT
cord-004862-yv76yvy5	159	18	codon	codon	NN
cord-004862-yv76yvy5	159	19	positions	position	NNS
cord-004862-yv76yvy5	159	20	in	in	IN
cord-004862-yv76yvy5	159	21	Fig	Fig	NNP
cord-004862-yv76yvy5	159	22	.	.	.
cord-004862-yv76yvy5	160	1	8	8	CD
cord-004862-yv76yvy5	160	2	.	.	.
cord-004862-yv76yvy5	161	1	The	the	DT
cord-004862-yv76yvy5	161	2	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	161	3	regions	region	NNS
cord-004862-yv76yvy5	161	4	from	from	IN
cord-004862-yv76yvy5	161	5	L1Md	L1Md	NNP
cord-004862-yv76yvy5	161	6	and	and	CC
cord-004862-yv76yvy5	161	7	L	L	NNP
cord-004862-yv76yvy5	161	8	1Hs	1h	NNS
cord-004862-yv76yvy5	161	9	are	be	VBP
cord-004862-yv76yvy5	161	10	displayed	display	VBN
cord-004862-yv76yvy5	161	11	as	as	IN
cord-004862-yv76yvy5	161	12	composite	composite	JJ
cord-004862-yv76yvy5	161	13	boxes	box	NNS
cord-004862-yv76yvy5	161	14	.	.	.
cord-004862-yv76yvy5	162	1	The	the	DT
cord-004862-yv76yvy5	162	2	darkness	darkness	NN
cord-004862-yv76yvy5	162	3	of	of	IN
cord-004862-yv76yvy5	162	4	the	the	DT
cord-004862-yv76yvy5	162	5	fill	fill	NN
cord-004862-yv76yvy5	162	6	in	in	IN
cord-004862-yv76yvy5	162	7	each	each	DT
cord-004862-yv76yvy5	162	8	box	box	NN
cord-004862-yv76yvy5	162	9	is	be	VBZ
cord-004862-yv76yvy5	162	10	proportional	proportional	JJ
cord-004862-yv76yvy5	162	11	to	to	IN
cord-004862-yv76yvy5	162	12	the	the	DT
cord-004862-yv76yvy5	162	13	extent	extent	NN
cord-004862-yv76yvy5	162	14	of	of	IN
cord-004862-yv76yvy5	162	15	similarity	similarity	NN
cord-004862-yv76yvy5	162	16	of	of	IN
cord-004862-yv76yvy5	162	17	the	the	DT
cord-004862-yv76yvy5	162	18	L	L	NNP
cord-004862-yv76yvy5	162	19	10c	10c	CD
cord-004862-yv76yvy5	162	20	sequence	sequence	NN
cord-004862-yv76yvy5	162	21	.	.	.
cord-004862-yv76yvy5	163	1	The	the	DT
cord-004862-yv76yvy5	163	2	percent	percent	NN
cord-004862-yv76yvy5	163	3	identity	identity	NN
cord-004862-yv76yvy5	163	4	ofthe	ofthe	DT
cord-004862-yv76yvy5	163	5	encoded	encode	VBN
cord-004862-yv76yvy5	163	6	amino	amino	NN
cord-004862-yv76yvy5	163	7	acids	acid	NNS
cord-004862-yv76yvy5	163	8	,	,	,
cord-004862-yv76yvy5	163	9	compared	compare	VBN
cord-004862-yv76yvy5	163	10	to	to	IN
cord-004862-yv76yvy5	163	11	the	the	DT
cord-004862-yv76yvy5	163	12	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	163	13	sequence	sequence	NN
cord-004862-yv76yvy5	163	14	,	,	,
cord-004862-yv76yvy5	163	15	are	be	VBP
cord-004862-yv76yvy5	163	16	given	give	VBN
cord-004862-yv76yvy5	163	17	in	in	IN
cord-004862-yv76yvy5	163	18	the	the	DT
cord-004862-yv76yvy5	163	19	boxes	box	NNS
cord-004862-yv76yvy5	163	20	.	.	.
cord-004862-yv76yvy5	164	1	A	a	DT
cord-004862-yv76yvy5	164	2	box	box	NN
cord-004862-yv76yvy5	164	3	representing	represent	VBG
cord-004862-yv76yvy5	164	4	a	a	DT
cord-004862-yv76yvy5	164	5	portion	portion	NN
cord-004862-yv76yvy5	164	6	of	of	IN
cord-004862-yv76yvy5	164	7	the	the	DT
cord-004862-yv76yvy5	164	8	type	type	NN
cord-004862-yv76yvy5	164	9	II	II	NNP
cord-004862-yv76yvy5	164	10	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	164	11	keratin	keratin	NN
cord-004862-yv76yvy5	164	12	sequence	sequence	NN
cord-004862-yv76yvy5	164	13	is	be	VBZ
cord-004862-yv76yvy5	164	14	aligned	align	VBN
cord-004862-yv76yvy5	164	15	with	with	IN
cord-004862-yv76yvy5	164	16	the	the	DT
cord-004862-yv76yvy5	164	17	segment	segment	NN
cord-004862-yv76yvy5	164	18	of	of	IN
cord-004862-yv76yvy5	164	19	the	the	DT
cord-004862-yv76yvy5	164	20	LIOc	LIOc	NNP
cord-004862-yv76yvy5	164	21	sequence	sequence	NN
cord-004862-yv76yvy5	164	22	that	that	WDT
cord-004862-yv76yvy5	164	23	matches	match	VBZ
cord-004862-yv76yvy5	164	24	it	-PRON-	PRP
cord-004862-yv76yvy5	164	25	.	.	.
cord-004862-yv76yvy5	165	1	The	the	DT
cord-004862-yv76yvy5	165	2	percent	percent	NN
cord-004862-yv76yvy5	165	3	of	of	IN
cord-004862-yv76yvy5	165	4	amino	amino	JJ
cord-004862-yv76yvy5	165	5	acids	acid	NNS
cord-004862-yv76yvy5	165	6	identical	identical	JJ
cord-004862-yv76yvy5	165	7	to	to	IN
cord-004862-yv76yvy5	165	8	the	the	DT
cord-004862-yv76yvy5	165	9	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	165	10	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	165	11	translated	translate	VBN
cord-004862-yv76yvy5	165	12	sequence	sequence	NN
cord-004862-yv76yvy5	165	13	is	be	VBZ
cord-004862-yv76yvy5	165	14	given	give	VBN
cord-004862-yv76yvy5	165	15	in	in	IN
cord-004862-yv76yvy5	165	16	the	the	DT
cord-004862-yv76yvy5	165	17	boxes	box	NNS
cord-004862-yv76yvy5	165	18	,	,	,
cord-004862-yv76yvy5	165	19	and	and	CC
cord-004862-yv76yvy5	165	20	the	the	DT
cord-004862-yv76yvy5	165	21	amino	amino	NN
cord-004862-yv76yvy5	165	22	acid	acid	NN
cord-004862-yv76yvy5	165	23	positions	position	NNS
cord-004862-yv76yvy5	165	24	in	in	IN
cord-004862-yv76yvy5	165	25	the	the	DT
cord-004862-yv76yvy5	165	26	keratin	keratin	NN
cord-004862-yv76yvy5	165	27	sequence	sequence	NN
cord-004862-yv76yvy5	165	28	are	be	VBP
cord-004862-yv76yvy5	165	29	listed	list	VBN
cord-004862-yv76yvy5	165	30	below	below	IN
cord-004862-yv76yvy5	165	31	the	the	DT
cord-004862-yv76yvy5	165	32	boxes	box	NNS
cord-004862-yv76yvy5	165	33	.	.	.
cord-004862-yv76yvy5	166	1	A	a	DT
cord-004862-yv76yvy5	166	2	gap	gap	NN
cord-004862-yv76yvy5	166	3	penalty	penalty	NN
cord-004862-yv76yvy5	166	4	of	of	IN
cord-004862-yv76yvy5	166	5	-	-	HYPH
cord-004862-yv76yvy5	166	6	!	!	NN
cord-004862-yv76yvy5	166	7	was	be	VBD
cord-004862-yv76yvy5	166	8	assessed	assess	VBN
cord-004862-yv76yvy5	166	9	in	in	IN
cord-004862-yv76yvy5	166	10	calculating	calculate	VBG
cord-004862-yv76yvy5	166	11	the	the	DT
cord-004862-yv76yvy5	166	12	percent	percent	NN
cord-004862-yv76yvy5	166	13	identities	identity	NNS
cord-004862-yv76yvy5	166	14	.	.	.
cord-004862-yv76yvy5	167	1	larity	larity	NNP
cord-004862-yv76yvy5	167	2	corresponds	correspond	VBZ
cord-004862-yv76yvy5	167	3	to	to	IN
cord-004862-yv76yvy5	167	4	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	167	5	and	and	CC
cord-004862-yv76yvy5	167	6	the	the	DT
cord-004862-yv76yvy5	167	7	short	short	JJ
cord-004862-yv76yvy5	167	8	region	region	NN
cord-004862-yv76yvy5	167	9	of	of	IN
cord-004862-yv76yvy5	167	10	similarity	similarity	NN
cord-004862-yv76yvy5	167	11	corresponds	correspond	VBZ
cord-004862-yv76yvy5	167	12	to	to	IN
cord-004862-yv76yvy5	167	13	the	the	DT
cord-004862-yv76yvy5	167	14	3	3	CD
cord-004862-yv76yvy5	167	15	'	'	POS
cord-004862-yv76yvy5	167	16	portion	portion	NN
cord-004862-yv76yvy5	167	17	of	of	IN
cord-004862-yv76yvy5	167	18	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	167	19	.	.	.
cord-004862-yv76yvy5	168	1	The	the	DT
cord-004862-yv76yvy5	168	2	two	two	CD
cord-004862-yv76yvy5	168	3	ORFs	orf	NNS
cord-004862-yv76yvy5	168	4	are	be	VBP
cord-004862-yv76yvy5	168	5	overlapping	overlap	VBG
cord-004862-yv76yvy5	168	6	in	in	IN
cord-004862-yv76yvy5	168	7	L1Md	L1Md	NNP
cord-004862-yv76yvy5	168	8	,	,	,
cord-004862-yv76yvy5	168	9	and	and	CC
cord-004862-yv76yvy5	168	10	it	-PRON-	PRP
cord-004862-yv76yvy5	168	11	is	be	VBZ
cord-004862-yv76yvy5	168	12	of	of	IN
cord-004862-yv76yvy5	168	13	interest	interest	NN
cord-004862-yv76yvy5	168	14	to	to	TO
cord-004862-yv76yvy5	168	15	determine	determine	VB
cord-004862-yv76yvy5	168	16	whether	whether	IN
cord-004862-yv76yvy5	168	17	this	this	DT
cord-004862-yv76yvy5	168	18	feature	feature	NN
cord-004862-yv76yvy5	168	19	is	be	VBZ
cord-004862-yv76yvy5	168	20	conserved	conserve	VBN
cord-004862-yv76yvy5	168	21	in	in	IN
cord-004862-yv76yvy5	168	22	LI	LI	NNP
cord-004862-yv76yvy5	168	23	repeats	repeat	VBZ
cord-004862-yv76yvy5	168	24	from	from	IN
cord-004862-yv76yvy5	168	25	other	other	JJ
cord-004862-yv76yvy5	168	26	species	specie	NNS
cord-004862-yv76yvy5	168	27	.	.	.
cord-004862-yv76yvy5	169	1	Also	also	RB
cord-004862-yv76yvy5	169	2	,	,	,
cord-004862-yv76yvy5	169	3	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	169	4	appears	appear	VBZ
cord-004862-yv76yvy5	169	5	to	to	TO
cord-004862-yv76yvy5	169	6	be	be	VB
cord-004862-yv76yvy5	169	7	a	a	DT
cord-004862-yv76yvy5	169	8	hybrid	hybrid	JJ
cord-004862-yv76yvy5	169	9	sequence	sequence	NN
cord-004862-yv76yvy5	169	10	because	because	IN
cord-004862-yv76yvy5	169	11	it	-PRON-	PRP
cord-004862-yv76yvy5	169	12	is	be	VBZ
cord-004862-yv76yvy5	169	13	well	well	RB
cord-004862-yv76yvy5	169	14	conserved	conserve	VBN
cord-004862-yv76yvy5	169	15	between	between	IN
cord-004862-yv76yvy5	169	16	species	specie	NNS
cord-004862-yv76yvy5	169	17	in	in	IN
cord-004862-yv76yvy5	169	18	the	the	DT
cord-004862-yv76yvy5	169	19	3	3	CD
cord-004862-yv76yvy5	169	20	'	'	NN
cord-004862-yv76yvy5	169	21	half	half	NN
cord-004862-yv76yvy5	170	1	but	but	CC
cord-004862-yv76yvy5	170	2	it	-PRON-	PRP
cord-004862-yv76yvy5	170	3	is	be	VBZ
cord-004862-yv76yvy5	170	4	not	not	RB
cord-004862-yv76yvy5	170	5	well	well	RB
cord-004862-yv76yvy5	170	6	conserved	conserve	VBN
cord-004862-yv76yvy5	170	7	in	in	IN
cord-004862-yv76yvy5	170	8	the	the	DT
cord-004862-yv76yvy5	170	9	5	5	CD
cord-004862-yv76yvy5	170	10	'	'	CD
cord-004862-yv76yvy5	170	11	half	half	NN
cord-004862-yv76yvy5	170	12	.	.	.
cord-004862-yv76yvy5	171	1	Therefore	therefore	RB
cord-004862-yv76yvy5	171	2	,	,	,
cord-004862-yv76yvy5	171	3	the	the	DT
cord-004862-yv76yvy5	171	4	sequence	sequence	NN
cord-004862-yv76yvy5	171	5	of	of	IN
cord-004862-yv76yvy5	171	6	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	171	7	and	and	CC
cord-004862-yv76yvy5	171	8	the	the	DT
cord-004862-yv76yvy5	171	9	region	region	NN
cord-004862-yv76yvy5	171	10	between	between	IN
cord-004862-yv76yvy5	171	11	the	the	DT
cord-004862-yv76yvy5	171	12	ORFs	ORFs	NNP
cord-004862-yv76yvy5	171	13	were	be	VBD
cord-004862-yv76yvy5	171	14	aligned	align	VBN
cord-004862-yv76yvy5	171	15	for	for	IN
cord-004862-yv76yvy5	171	16	the	the	DT
cord-004862-yv76yvy5	171	17	L1	L1	NNP
cord-004862-yv76yvy5	171	18	repeats	repeat	VBZ
cord-004862-yv76yvy5	171	19	from	from	IN
cord-004862-yv76yvy5	171	20	rabbit	rabbit	NN
cord-004862-yv76yvy5	171	21	,	,	,
cord-004862-yv76yvy5	171	22	mouse	mouse	NN
cord-004862-yv76yvy5	171	23	,	,	,
cord-004862-yv76yvy5	171	24	rat	rat	NN
cord-004862-yv76yvy5	171	25	,	,	,
cord-004862-yv76yvy5	171	26	and	and	CC
cord-004862-yv76yvy5	171	27	humans	human	NNS
cord-004862-yv76yvy5	171	28	.	.	.
cord-004862-yv76yvy5	172	1	Figure	figure	NN
cord-004862-yv76yvy5	172	2	8	8	CD
cord-004862-yv76yvy5	172	3	shows	show	NNS
cord-004862-yv76yvy5	172	4	both	both	CC
cord-004862-yv76yvy5	172	5	the	the	DT
cord-004862-yv76yvy5	172	6	aligned	align	VBN
cord-004862-yv76yvy5	172	7	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	172	8	sequences	sequence	NNS
cord-004862-yv76yvy5	172	9	and	and	CC
cord-004862-yv76yvy5	172	10	the	the	DT
cord-004862-yv76yvy5	172	11	predicted	predict	VBN
cord-004862-yv76yvy5	172	12	amino	amino	NN
cord-004862-yv76yvy5	172	13	acid	acid	NN
cord-004862-yv76yvy5	172	14	sequences	sequence	NNS
cord-004862-yv76yvy5	172	15	.	.	.
cord-004862-yv76yvy5	173	1	Sequences	sequence	NNS
cord-004862-yv76yvy5	173	2	that	that	WDT
cord-004862-yv76yvy5	173	3	match	match	VBP
cord-004862-yv76yvy5	173	4	well	well	RB
cord-004862-yv76yvy5	173	5	between	between	IN
cord-004862-yv76yvy5	173	6	species	specie	NNS
cord-004862-yv76yvy5	173	7	are	be	VBP
cord-004862-yv76yvy5	173	8	in	in	IN
cord-004862-yv76yvy5	173	9	reverse	reverse	JJ
cord-004862-yv76yvy5	173	10	text	text	NN
cord-004862-yv76yvy5	173	11	,	,	,
cord-004862-yv76yvy5	173	12	whereas	whereas	IN
cord-004862-yv76yvy5	173	13	sequences	sequence	NNS
cord-004862-yv76yvy5	173	14	that	that	WDT
cord-004862-yv76yvy5	173	15	do	do	VBP
cord-004862-yv76yvy5	173	16	not	not	RB
cord-004862-yv76yvy5	173	17	match	match	VB
cord-004862-yv76yvy5	173	18	well	well	RB
cord-004862-yv76yvy5	173	19	are	be	VBP
cord-004862-yv76yvy5	173	20	in	in	IN
cord-004862-yv76yvy5	173	21	plain	plain	JJ
cord-004862-yv76yvy5	173	22	text	text	NN
cord-004862-yv76yvy5	173	23	.	.	.
cord-004862-yv76yvy5	174	1	Inspection	inspection	NN
cord-004862-yv76yvy5	174	2	of	of	IN
cord-004862-yv76yvy5	174	3	the	the	DT
cord-004862-yv76yvy5	174	4	aligned	align	VBN
cord-004862-yv76yvy5	174	5	L1	L1	NNP
cord-004862-yv76yvy5	174	6	sequences	sequence	NNS
cord-004862-yv76yvy5	174	7	allows	allow	VBZ
cord-004862-yv76yvy5	174	8	a	a	DT
cord-004862-yv76yvy5	174	9	tentative	tentative	JJ
cord-004862-yv76yvy5	174	10	identification	identification	NN
cord-004862-yv76yvy5	174	11	of	of	IN
cord-004862-yv76yvy5	174	12	the	the	DT
cord-004862-yv76yvy5	174	13	start	start	NN
cord-004862-yv76yvy5	174	14	and	and	CC
cord-004862-yv76yvy5	174	15	stop	stop	VB
cord-004862-yv76yvy5	174	16	sites	site	NNS
cord-004862-yv76yvy5	174	17	of	of	IN
cord-004862-yv76yvy5	174	18	the	the	DT
cord-004862-yv76yvy5	174	19	ORFs	ORFs	NNP
cord-004862-yv76yvy5	174	20	.	.	.
cord-004862-yv76yvy5	175	1	This	this	DT
cord-004862-yv76yvy5	175	2	analysis	analysis	NN
cord-004862-yv76yvy5	175	3	reveals	reveal	VBZ
cord-004862-yv76yvy5	175	4	that	that	IN
cord-004862-yv76yvy5	175	5	no	no	DT
cord-004862-yv76yvy5	175	6	overlap	overlap	NN
cord-004862-yv76yvy5	175	7	between	between	IN
cord-004862-yv76yvy5	175	8	reading	read	VBG
cord-004862-yv76yvy5	175	9	frames	frame	NNS
cord-004862-yv76yvy5	175	10	is	be	VBZ
cord-004862-yv76yvy5	175	11	seen	see	VBN
cord-004862-yv76yvy5	175	12	in	in	IN
cord-004862-yv76yvy5	175	13	rabbit	rabbit	NN
cord-004862-yv76yvy5	175	14	and	and	CC
cord-004862-yv76yvy5	175	15	human	human	JJ
cord-004862-yv76yvy5	175	16	L1	L1	NNP
cord-004862-yv76yvy5	175	17	repeats	repeat	VBZ
cord-004862-yv76yvy5	175	18	.	.	.
cord-004862-yv76yvy5	176	1	The	the	DT
cord-004862-yv76yvy5	176	2	end	end	NN
cord-004862-yv76yvy5	176	3	of	of	IN
cord-004862-yv76yvy5	176	4	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	176	5	in	in	IN
cord-004862-yv76yvy5	176	6	L1Md	L1Md	NNP
cord-004862-yv76yvy5	176	7	is	be	VBZ
cord-004862-yv76yvy5	176	8	the	the	DT
cord-004862-yv76yvy5	176	9	TAA	TAA	NNP
cord-004862-yv76yvy5	176	10	at	at	IN
cord-004862-yv76yvy5	176	11	positions	position	NNS
cord-004862-yv76yvy5	176	12	1163	1163	CD
cord-004862-yv76yvy5	176	13	-	-	SYM
cord-004862-yv76yvy5	176	14	1165	1165	CD
cord-004862-yv76yvy5	177	1	(	(	-LRB-
cord-004862-yv76yvy5	177	2	boldface	boldface	NNS
cord-004862-yv76yvy5	177	3	in	in	IN
cord-004862-yv76yvy5	177	4	Fig	Fig	NNP
cord-004862-yv76yvy5	177	5	.	.	.
cord-004862-yv76yvy5	177	6	8)	8)	NNP
cord-004862-yv76yvy5	177	7	.	.	.
cord-004862-yv76yvy5	178	1	The	the	DT
cord-004862-yv76yvy5	178	2	same	same	JJ
cord-004862-yv76yvy5	178	3	sequence	sequence	NN
cord-004862-yv76yvy5	178	4	is	be	VBZ
cord-004862-yv76yvy5	178	5	found	find	VBN
cord-004862-yv76yvy5	178	6	in	in	IN
cord-004862-yv76yvy5	178	7	the	the	DT
cord-004862-yv76yvy5	178	8	rat	rat	NN
cord-004862-yv76yvy5	178	9	L1	L1	NNP
cord-004862-yv76yvy5	178	10	sequence	sequence	NN
cord-004862-yv76yvy5	178	11	(	(	-LRB-
cord-004862-yv76yvy5	178	12	L	L	NNP
cord-004862-yv76yvy5	178	13	1Rn	1rn	CD
cord-004862-yv76yvy5	178	14	)	)	-RRB-
cord-004862-yv76yvy5	178	15	,	,	,
cord-004862-yv76yvy5	178	16	and	and	CC
cord-004862-yv76yvy5	178	17	in	in	IN
cord-004862-yv76yvy5	178	18	-	-	HYPH
cord-004862-yv76yvy5	178	19	phase	phase	NN
cord-004862-yv76yvy5	178	20	terminators	terminator	NNS
cord-004862-yv76yvy5	178	21	are	be	VBP
cord-004862-yv76yvy5	178	22	found	find	VBN
cord-004862-yv76yvy5	178	23	nearby	nearby	RB
cord-004862-yv76yvy5	178	24	in	in	IN
cord-004862-yv76yvy5	178	25	L10c	L10c	NNP
cord-004862-yv76yvy5	178	26	and	and	CC
cord-004862-yv76yvy5	178	27	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	178	28	(	(	-LRB-
cord-004862-yv76yvy5	178	29	boldface	boldface	NN
cord-004862-yv76yvy5	178	30	TAAs	TAAs	NNP
cord-004862-yv76yvy5	178	31	in	in	IN
cord-004862-yv76yvy5	178	32	Fig	Fig	NNP
cord-004862-yv76yvy5	178	33	.	.	.
cord-004862-yv76yvy5	178	34	8	8	CD
cord-004862-yv76yvy5	178	35	)	)	-RRB-
cord-004862-yv76yvy5	178	36	.	.	.
cord-004862-yv76yvy5	179	1	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	180	1	in	in	IN
cord-004862-yv76yvy5	180	2	L1Md	L1Md	NNP
cord-004862-yv76yvy5	180	3	begins	begin	VBZ
cord-004862-yv76yvy5	180	4	in	in	IN
cord-004862-yv76yvy5	180	5	a	a	DT
cord-004862-yv76yvy5	180	6	different	different	JJ
cord-004862-yv76yvy5	180	7	reading	reading	NN
cord-004862-yv76yvy5	180	8	frame	frame	NN
cord-004862-yv76yvy5	180	9	at	at	IN
cord-004862-yv76yvy5	180	10	position	position	NN
cord-004862-yv76yvy5	180	11	1149	1149	CD
cord-004862-yv76yvy5	180	12	,	,	,
cord-004862-yv76yvy5	180	13	and	and	CC
cord-004862-yv76yvy5	180	14	thus	thus	RB
cord-004862-yv76yvy5	180	15	it	-PRON-	PRP
cord-004862-yv76yvy5	180	16	overlaps	overlap	VBZ
cord-004862-yv76yvy5	180	17	with	with	IN
cord-004862-yv76yvy5	180	18	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	180	19	for	for	IN
cord-004862-yv76yvy5	180	20	14	14	CD
cord-004862-yv76yvy5	180	21	nucleotides	nucleotide	NNS
cord-004862-yv76yvy5	180	22	.	.	.
cord-004862-yv76yvy5	181	1	By	by	IN
cord-004862-yv76yvy5	181	2	aligning	align	VBG
cord-004862-yv76yvy5	181	3	the	the	DT
cord-004862-yv76yvy5	181	4	sequences	sequence	NNS
cord-004862-yv76yvy5	181	5	of	of	IN
cord-004862-yv76yvy5	181	6	the	the	DT
cord-004862-yv76yvy5	181	7	different	different	JJ
cord-004862-yv76yvy5	181	8	L1	L1	NNP
cord-004862-yv76yvy5	181	9	s	s	NN
cord-004862-yv76yvy5	181	10	in	in	IN
cord-004862-yv76yvy5	181	11	the	the	DT
cord-004862-yv76yvy5	181	12	well	well	RB
cord-004862-yv76yvy5	181	13	-	-	HYPH
cord-004862-yv76yvy5	181	14	conserved	conserve	VBN
cord-004862-yv76yvy5	181	15	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	181	16	region	region	NN
cord-004862-yv76yvy5	181	17	,	,	,
cord-004862-yv76yvy5	181	18	it	-PRON-	PRP
cord-004862-yv76yvy5	181	19	is	be	VBZ
cord-004862-yv76yvy5	181	20	apparent	apparent	JJ
cord-004862-yv76yvy5	181	21	that	that	IN
cord-004862-yv76yvy5	181	22	an	an	DT
cord-004862-yv76yvy5	181	23	ATG	ATG	NNP
cord-004862-yv76yvy5	181	24	is	be	VBZ
cord-004862-yv76yvy5	181	25	conserved	conserve	VBN
cord-004862-yv76yvy5	181	26	in	in	IN
cord-004862-yv76yvy5	181	27	the	the	DT
cord-004862-yv76yvy5	181	28	rabbit	rabbit	NN
cord-004862-yv76yvy5	181	29	and	and	CC
cord-004862-yv76yvy5	181	30	human	human	JJ
cord-004862-yv76yvy5	181	31	sequences	sequence	NNS
cord-004862-yv76yvy5	181	32	at	at	IN
cord-004862-yv76yvy5	181	33	positions	position	NNS
cord-004862-yv76yvy5	181	34	1235	1235	CD
cord-004862-yv76yvy5	181	35	-	-	SYM
cord-004862-yv76yvy5	181	36	1237	1237	CD
cord-004862-yv76yvy5	181	37	.	.	.
cord-004862-yv76yvy5	182	1	An	an	DT
cord-004862-yv76yvy5	182	2	in	in	IN
cord-004862-yv76yvy5	182	3	-	-	HYPH
cord-004862-yv76yvy5	182	4	frame	frame	NN
cord-004862-yv76yvy5	182	5	ATG	ATG	NNP
cord-004862-yv76yvy5	182	6	two	two	CD
cord-004862-yv76yvy5	182	7	codons	codon	NNS
cord-004862-yv76yvy5	182	8	upstream	upstream	RB
cord-004862-yv76yvy5	182	9	was	be	VBD
cord-004862-yv76yvy5	182	10	previously	previously	RB
cord-004862-yv76yvy5	182	11	identified	identify	VBN
cord-004862-yv76yvy5	182	12	as	as	IN
cord-004862-yv76yvy5	182	13	the	the	DT
cord-004862-yv76yvy5	182	14	start	start	NN
cord-004862-yv76yvy5	182	15	of	of	IN
cord-004862-yv76yvy5	182	16	ORFb	ORFb	NNS
cord-004862-yv76yvy5	182	17	in	in	IN
cord-004862-yv76yvy5	182	18	the	the	DT
cord-004862-yv76yvy5	182	19	L1Rn	l1rn	CD
cord-004862-yv76yvy5	182	20	sequence	sequence	NN
cord-004862-yv76yvy5	183	1	(	(	-LRB-
cord-004862-yv76yvy5	183	2	D'Ambrosio	D'Ambrosio	NNP
cord-004862-yv76yvy5	183	3	et	et	NNP
cord-004862-yv76yvy5	183	4	al	al	NNP
cord-004862-yv76yvy5	183	5	.	.	NNP
cord-004862-yv76yvy5	183	6	1986	1986	CD
cord-004862-yv76yvy5	183	7	)	)	-RRB-
cord-004862-yv76yvy5	183	8	and	and	CC
cord-004862-yv76yvy5	183	9	an	an	DT
cord-004862-yv76yvy5	183	10	ATG	ATG	NNP
cord-004862-yv76yvy5	183	11	is	be	VBZ
cord-004862-yv76yvy5	183	12	also	also	RB
cord-004862-yv76yvy5	183	13	in	in	IN
cord-004862-yv76yvy5	183	14	frame	frame	NN
cord-004862-yv76yvy5	183	15	in	in	IN
cord-004862-yv76yvy5	183	16	the	the	DT
cord-004862-yv76yvy5	183	17	L1Md	L1Md	NNP
cord-004862-yv76yvy5	183	18	sequence	sequence	NN
cord-004862-yv76yvy5	183	19	seven	seven	CD
cord-004862-yv76yvy5	183	20	codons	codon	NNS
cord-004862-yv76yvy5	183	21	upstream	upstream	RB
cord-004862-yv76yvy5	183	22	.	.	.
cord-004862-yv76yvy5	184	1	One	one	PRP
cord-004862-yv76yvy5	184	2	can	can	MD
cord-004862-yv76yvy5	184	3	propose	propose	VB
cord-004862-yv76yvy5	184	4	that	that	IN
cord-004862-yv76yvy5	184	5	the	the	DT
cord-004862-yv76yvy5	184	6	TAA	TAA	NNP
cord-004862-yv76yvy5	184	7	close	close	NN
cord-004862-yv76yvy5	184	8	to	to	TO
cord-004862-yv76yvy5	184	9	position	position	NN
cord-004862-yv76yvy5	184	10	1163	1163	CD
cord-004862-yv76yvy5	184	11	is	be	VBZ
cord-004862-yv76yvy5	184	12	the	the	DT
cord-004862-yv76yvy5	184	13	end	end	NN
cord-004862-yv76yvy5	184	14	of	of	IN
cord-004862-yv76yvy5	184	15	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	184	16	and	and	CC
cord-004862-yv76yvy5	184	17	the	the	DT
cord-004862-yv76yvy5	184	18	ATG	ATG	NNP
cord-004862-yv76yvy5	184	19	at	at	IN
cord-004862-yv76yvy5	184	20	positions	position	NNS
cord-004862-yv76yvy5	184	21	1235	1235	CD
cord-004862-yv76yvy5	184	22	-	-	SYM
cord-004862-yv76yvy5	184	23	1237	1237	CD
cord-004862-yv76yvy5	184	24	is	be	VBZ
cord-004862-yv76yvy5	184	25	the	the	DT
cord-004862-yv76yvy5	184	26	start	start	NN
cord-004862-yv76yvy5	184	27	of	of	IN
cord-004862-yv76yvy5	184	28	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	184	29	in	in	IN
cord-004862-yv76yvy5	184	30	rabbit	rabbit	NN
cord-004862-yv76yvy5	184	31	and	and	CC
cord-004862-yv76yvy5	184	32	human	human	JJ
cord-004862-yv76yvy5	184	33	L1	L1	NNP
cord-004862-yv76yvy5	184	34	repeats	repeat	VBZ
cord-004862-yv76yvy5	184	35	.	.	.
cord-004862-yv76yvy5	185	1	In	in	IN
cord-004862-yv76yvy5	185	2	an	an	DT
cord-004862-yv76yvy5	185	3	independent	independent	JJ
cord-004862-yv76yvy5	185	4	analysis	analysis	NN
cord-004862-yv76yvy5	185	5	of	of	IN
cord-004862-yv76yvy5	185	6	several	several	JJ
cord-004862-yv76yvy5	185	7	individual	individual	JJ
cord-004862-yv76yvy5	185	8	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	185	9	repeats	repeat	VBZ
cord-004862-yv76yvy5	185	10	,	,	,
cord-004862-yv76yvy5	185	11	these	these	DT
cord-004862-yv76yvy5	185	12	same	same	JJ
cord-004862-yv76yvy5	185	13	codons	codon	NNS
cord-004862-yv76yvy5	185	14	were	be	VBD
cord-004862-yv76yvy5	185	15	assigned	assign	VBN
cord-004862-yv76yvy5	185	16	as	as	IN
cord-004862-yv76yvy5	185	17	the	the	DT
cord-004862-yv76yvy5	185	18	end	end	NN
cord-004862-yv76yvy5	185	19	of	of	IN
cord-004862-yv76yvy5	185	20	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	185	21	and	and	CC
cord-004862-yv76yvy5	185	22	the	the	DT
cord-004862-yv76yvy5	185	23	start	start	NN
cord-004862-yv76yvy5	185	24	of	of	IN
cord-004862-yv76yvy5	185	25	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	185	26	in	in	IN
cord-004862-yv76yvy5	185	27	the	the	DT
cord-004862-yv76yvy5	185	28	consensus	consensus	NN
cord-004862-yv76yvy5	185	29	L	L	NNP
cord-004862-yv76yvy5	185	30	1Hs	1Hs	NNP
cord-004862-yv76yvy5	185	31	sequence	sequence	NN
cord-004862-yv76yvy5	186	1	(	(	-LRB-
cord-004862-yv76yvy5	186	2	Scott	Scott	NNP
cord-004862-yv76yvy5	186	3	et	et	NNP
cord-004862-yv76yvy5	186	4	al	al	NNP
cord-004862-yv76yvy5	186	5	.	.	NNP
cord-004862-yv76yvy5	186	6	1987	1987	CD
cord-004862-yv76yvy5	186	7	)	)	-RRB-
cord-004862-yv76yvy5	186	8	.	.	.
cord-004862-yv76yvy5	187	1	As	as	IN
cord-004862-yv76yvy5	187	2	shown	show	VBN
cord-004862-yv76yvy5	187	3	in	in	IN
cord-004862-yv76yvy5	187	4	Fig	Fig	NNP
cord-004862-yv76yvy5	187	5	.	.	.
cord-004862-yv76yvy5	188	1	8	8	CD
cord-004862-yv76yvy5	188	2	,	,	,
cord-004862-yv76yvy5	188	3	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	188	4	is	be	VBZ
cord-004862-yv76yvy5	188	5	in	in	IN
cord-004862-yv76yvy5	188	6	the	the	DT
cord-004862-yv76yvy5	188	7	same	same	JJ
cord-004862-yv76yvy5	188	8	reading	reading	NN
cord-004862-yv76yvy5	188	9	frame	frame	NN
cord-004862-yv76yvy5	188	10	as	as	IN
cord-004862-yv76yvy5	188	11	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	188	12	in	in	IN
cord-004862-yv76yvy5	188	13	the	the	DT
cord-004862-yv76yvy5	188	14	L	L	NNP
cord-004862-yv76yvy5	188	15	10c	10c	NNPS
cord-004862-yv76yvy5	188	16	and	and	CC
cord-004862-yv76yvy5	188	17	L	L	NNP
cord-004862-yv76yvy5	188	18	1Hs	1hs	NN
cord-004862-yv76yvy5	188	19	sequences	sequence	NNS
cord-004862-yv76yvy5	188	20	.	.	.
cord-004862-yv76yvy5	189	1	Thus	thus	RB
cord-004862-yv76yvy5	189	2	,	,	,
cord-004862-yv76yvy5	189	3	the	the	DT
cord-004862-yv76yvy5	189	4	overlap	overlap	NN
cord-004862-yv76yvy5	189	5	in	in	IN
cord-004862-yv76yvy5	189	6	reading	read	VBG
cord-004862-yv76yvy5	189	7	frames	frame	NNS
cord-004862-yv76yvy5	189	8	seen	see	VBN
cord-004862-yv76yvy5	189	9	for	for	IN
cord-004862-yv76yvy5	189	10	L1Md	L1Md	NNP
cord-004862-yv76yvy5	189	11	is	be	VBZ
cord-004862-yv76yvy5	189	12	not	not	RB
cord-004862-yv76yvy5	189	13	observed	observe	VBN
cord-004862-yv76yvy5	189	14	in	in	IN
cord-004862-yv76yvy5	189	15	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	189	16	and	and	CC
cord-004862-yv76yvy5	189	17	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	189	18	.	.	.
cord-004862-yv76yvy5	190	1	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	190	2	in	in	IN
cord-004862-yv76yvy5	190	3	L1Rn	L1Rn	NNP
cord-004862-yv76yvy5	190	4	is	be	VBZ
cord-004862-yv76yvy5	190	5	in	in	IN
cord-004862-yv76yvy5	190	6	a	a	DT
cord-004862-yv76yvy5	190	7	different	different	JJ
cord-004862-yv76yvy5	190	8	reading	reading	NN
cord-004862-yv76yvy5	190	9	frame	frame	NN
cord-004862-yv76yvy5	190	10	than	than	IN
cord-004862-yv76yvy5	190	11	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	190	12	,	,	,
cord-004862-yv76yvy5	190	13	but	but	CC
cord-004862-yv76yvy5	190	14	the	the	DT
cord-004862-yv76yvy5	190	15	L1Rn	l1rn	CD
cord-004862-yv76yvy5	190	16	sequence	sequence	NN
cord-004862-yv76yvy5	190	17	does	do	VBZ
cord-004862-yv76yvy5	190	18	have	have	VB
cord-004862-yv76yvy5	190	19	an	an	DT
cord-004862-yv76yvy5	190	20	ATG	ATG	NNP
cord-004862-yv76yvy5	190	21	proposed	propose	VBN
cord-004862-yv76yvy5	190	22	as	as	IN
cord-004862-yv76yvy5	190	23	the	the	DT
cord-004862-yv76yvy5	190	24	start	start	NN
cord-004862-yv76yvy5	190	25	of	of	IN
cord-004862-yv76yvy5	190	26	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	190	27	.	.	.
cord-004862-yv76yvy5	191	1	Thus	thus	RB
cord-004862-yv76yvy5	191	2	,	,	,
cord-004862-yv76yvy5	191	3	LIRn	lirn	NN
cord-004862-yv76yvy5	191	4	has	have	VBZ
cord-004862-yv76yvy5	191	5	overlapping	overlap	VBG
cord-004862-yv76yvy5	191	6	reading	reading	NN
cord-004862-yv76yvy5	191	7	frames	frame	NNS
cord-004862-yv76yvy5	191	8	,	,	,
cord-004862-yv76yvy5	191	9	but	but	CC
cord-004862-yv76yvy5	191	10	the	the	DT
cord-004862-yv76yvy5	191	11	sequence	sequence	NN
cord-004862-yv76yvy5	191	12	in	in	IN
cord-004862-yv76yvy5	191	13	the	the	DT
cord-004862-yv76yvy5	191	14	overlap	overlap	NN
cord-004862-yv76yvy5	191	15	may	may	MD
cord-004862-yv76yvy5	191	16	not	not	RB
cord-004862-yv76yvy5	191	17	be	be	VB
cord-004862-yv76yvy5	191	18	used	use	VBN
cord-004862-yv76yvy5	191	19	to	to	TO
cord-004862-yv76yvy5	191	20	encode	encode	VB
cord-004862-yv76yvy5	191	21	a	a	DT
cord-004862-yv76yvy5	191	22	protein	protein	NN
cord-004862-yv76yvy5	191	23	.	.	.
cord-004862-yv76yvy5	192	1	The	the	DT
cord-004862-yv76yvy5	192	2	region	region	NN
cord-004862-yv76yvy5	192	3	between	between	IN
cord-004862-yv76yvy5	192	4	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	192	5	and	and	CC
cord-004862-yv76yvy5	192	6	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	192	7	is	be	VBZ
cord-004862-yv76yvy5	192	8	not	not	RB
cord-004862-yv76yvy5	192	9	conserved	conserve	VBN
cord-004862-yv76yvy5	192	10	between	between	IN
cord-004862-yv76yvy5	192	11	mammalian	mammalian	JJ
cord-004862-yv76yvy5	192	12	species	specie	NNS
cord-004862-yv76yvy5	192	13	.	.	.
cord-004862-yv76yvy5	193	1	The	the	DT
cord-004862-yv76yvy5	193	2	sequence	sequence	NN
cord-004862-yv76yvy5	193	3	between	between	IN
cord-004862-yv76yvy5	193	4	the	the	DT
cord-004862-yv76yvy5	193	5	TAA	TAA	NNP
cord-004862-yv76yvy5	193	6	that	that	WDT
cord-004862-yv76yvy5	193	7	ends	end	VBZ
cord-004862-yv76yvy5	193	8	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	194	1	and	and	CC
cord-004862-yv76yvy5	194	2	the	the	DT
cord-004862-yv76yvy5	194	3	ATG	ATG	NNP
cord-004862-yv76yvy5	194	4	proposed	propose	VBD
cord-004862-yv76yvy5	194	5	to	to	TO
cord-004862-yv76yvy5	194	6	be	be	VB
cord-004862-yv76yvy5	194	7	the	the	DT
cord-004862-yv76yvy5	194	8	start	start	NN
cord-004862-yv76yvy5	194	9	of	of	IN
cord-004862-yv76yvy5	194	10	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	195	1	is	be	VBZ
cord-004862-yv76yvy5	195	2	in	in	IN
cord-004862-yv76yvy5	195	3	a	a	DT
cord-004862-yv76yvy5	195	4	region	region	NN
cord-004862-yv76yvy5	195	5	that	that	WDT
cord-004862-yv76yvy5	195	6	is	be	VBZ
cord-004862-yv76yvy5	195	7	quite	quite	RB
cord-004862-yv76yvy5	195	8	dissimilar	dissimilar	JJ
cord-004862-yv76yvy5	195	9	between	between	IN
cord-004862-yv76yvy5	195	10	rabbit	rabbit	NN
cord-004862-yv76yvy5	195	11	and	and	CC
cord-004862-yv76yvy5	195	12	mouse	mouse	NN
cord-004862-yv76yvy5	195	13	and	and	CC
cord-004862-yv76yvy5	195	14	between	between	IN
cord-004862-yv76yvy5	195	15	rabbit	rabbit	NN
cord-004862-yv76yvy5	195	16	and	and	CC
cord-004862-yv76yvy5	195	17	human	human	JJ
cord-004862-yv76yvy5	195	18	(	(	-LRB-
cord-004862-yv76yvy5	195	19	plain	plain	JJ
cord-004862-yv76yvy5	195	20	text	text	NN
cord-004862-yv76yvy5	195	21	region	region	NN
cord-004862-yv76yvy5	195	22	between	between	IN
cord-004862-yv76yvy5	195	23	positions	position	NNS
cord-004862-yv76yvy5	195	24	1121	1121	CD
cord-004862-yv76yvy5	195	25	and	and	CC
cord-004862-yv76yvy5	195	26	1240	1240	CD
cord-004862-yv76yvy5	195	27	in	in	IN
cord-004862-yv76yvy5	195	28	Fig	Fig	NNP
cord-004862-yv76yvy5	195	29	.	.	NNP
cord-004862-yv76yvy5	195	30	8	8	CD
cord-004862-yv76yvy5	195	31	)	)	-RRB-
cord-004862-yv76yvy5	195	32	.	.	.
cord-004862-yv76yvy5	196	1	This	this	DT
cord-004862-yv76yvy5	196	2	is	be	VBZ
cord-004862-yv76yvy5	196	3	the	the	DT
cord-004862-yv76yvy5	196	4	region	region	NN
cord-004862-yv76yvy5	196	5	of	of	IN
cord-004862-yv76yvy5	196	6	no	no	DT
cord-004862-yv76yvy5	196	7	similarity	similarity	NN
cord-004862-yv76yvy5	196	8	previously	previously	RB
cord-004862-yv76yvy5	196	9	seen	see	VBN
cord-004862-yv76yvy5	196	10	in	in	IN
cord-004862-yv76yvy5	196	11	dotplots	dotplot	NNS
cord-004862-yv76yvy5	196	12	(	(	-LRB-
cord-004862-yv76yvy5	196	13	Fig	Fig	NNP
cord-004862-yv76yvy5	196	14	.	.	.
cord-004862-yv76yvy5	196	15	6	6	CD
cord-004862-yv76yvy5	196	16	)	)	-RRB-
cord-004862-yv76yvy5	196	17	.	.	.
cord-004862-yv76yvy5	197	1	The	the	DT
cord-004862-yv76yvy5	197	2	sequence	sequence	NN
cord-004862-yv76yvy5	197	3	between	between	IN
cord-004862-yv76yvy5	197	4	the	the	DT
cord-004862-yv76yvy5	197	5	L1	L1	NNP
cord-004862-yv76yvy5	197	6	ORFs	ORFs	NNP
cord-004862-yv76yvy5	197	7	is	be	VBZ
cord-004862-yv76yvy5	197	8	also	also	RB
cord-004862-yv76yvy5	197	9	not	not	RB
cord-004862-yv76yvy5	197	10	conserved	conserve	VBN
cord-004862-yv76yvy5	197	11	in	in	IN
cord-004862-yv76yvy5	197	12	comparisons	comparison	NNS
cord-004862-yv76yvy5	197	13	between	between	IN
cord-004862-yv76yvy5	197	14	the	the	DT
cord-004862-yv76yvy5	197	15	human	human	JJ
cord-004862-yv76yvy5	197	16	and	and	CC
cord-004862-yv76yvy5	197	17	rodent	rodent	NN
cord-004862-yv76yvy5	197	18	sequences	sequence	NNS
cord-004862-yv76yvy5	197	19	(	(	-LRB-
cord-004862-yv76yvy5	197	20	Scott	Scott	NNP
cord-004862-yv76yvy5	197	21	et	et	NNP
cord-004862-yv76yvy5	197	22	al	al	NNP
cord-004862-yv76yvy5	197	23	.	.	NNP
cord-004862-yv76yvy5	197	24	1987	1987	CD
cord-004862-yv76yvy5	197	25	)	)	-RRB-
cord-004862-yv76yvy5	197	26	.	.	.
cord-004862-yv76yvy5	198	1	Because	because	IN
cord-004862-yv76yvy5	198	2	this	this	DT
cord-004862-yv76yvy5	198	3	region	region	NN
cord-004862-yv76yvy5	198	4	is	be	VBZ
cord-004862-yv76yvy5	198	5	not	not	RB
cord-004862-yv76yvy5	198	6	conserved	conserve	VBN
cord-004862-yv76yvy5	198	7	,	,	,
cord-004862-yv76yvy5	198	8	whereas	whereas	IN
cord-004862-yv76yvy5	198	9	the	the	DT
cord-004862-yv76yvy5	198	10	sequences	sequence	NNS
cord-004862-yv76yvy5	198	11	before	before	IN
cord-004862-yv76yvy5	198	12	and	and	CC
cord-004862-yv76yvy5	198	13	after	after	IN
cord-004862-yv76yvy5	198	14	it	-PRON-	PRP
cord-004862-yv76yvy5	198	15	are	be	VBP
cord-004862-yv76yvy5	198	16	conserved	conserve	VBN
cord-004862-yv76yvy5	198	17	,	,	,
cord-004862-yv76yvy5	198	18	probably	probably	RB
cord-004862-yv76yvy5	198	19	for	for	IN
cord-004862-yv76yvy5	198	20	their	-PRON-	PRP$
cord-004862-yv76yvy5	198	21	capacity	capacity	NN
cord-004862-yv76yvy5	198	22	to	to	TO
cord-004862-yv76yvy5	198	23	encode	encode	VB
cord-004862-yv76yvy5	198	24	a	a	DT
cord-004862-yv76yvy5	198	25	protein	protein	NN
cord-004862-yv76yvy5	198	26	,	,	,
cord-004862-yv76yvy5	198	27	it	-PRON-	PRP
cord-004862-yv76yvy5	198	28	is	be	VBZ
cord-004862-yv76yvy5	198	29	unlikely	unlikely	JJ
cord-004862-yv76yvy5	198	30	that	that	IN
cord-004862-yv76yvy5	198	31	the	the	DT
cord-004862-yv76yvy5	198	32	inter	inter	JJ
cord-004862-yv76yvy5	198	33	-	-	JJ
cord-004862-yv76yvy5	198	34	ORF	ORF	NNP
cord-004862-yv76yvy5	198	35	region	region	NN
cord-004862-yv76yvy5	198	36	encodes	encode	VBZ
cord-004862-yv76yvy5	198	37	a	a	DT
cord-004862-yv76yvy5	198	38	protein	protein	NN
cord-004862-yv76yvy5	198	39	.	.	.
cord-004862-yv76yvy5	199	1	This	this	DT
cord-004862-yv76yvy5	199	2	lack	lack	NN
cord-004862-yv76yvy5	199	3	of	of	IN
cord-004862-yv76yvy5	199	4	conservation	conservation	NN
cord-004862-yv76yvy5	199	5	supports	support	VBZ
cord-004862-yv76yvy5	199	6	the	the	DT
cord-004862-yv76yvy5	199	7	proposed	propose	VBN
cord-004862-yv76yvy5	199	8	assignments	assignment	NNS
cord-004862-yv76yvy5	199	9	for	for	IN
cord-004862-yv76yvy5	199	10	the	the	DT
cord-004862-yv76yvy5	199	11	start	start	NN
cord-004862-yv76yvy5	199	12	of	of	IN
cord-004862-yv76yvy5	199	13	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	199	14	in	in	IN
cord-004862-yv76yvy5	199	15	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	199	16	and	and	CC
cord-004862-yv76yvy5	199	17	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	199	18	.	.	.
cord-004862-yv76yvy5	200	1	The	the	DT
cord-004862-yv76yvy5	200	2	mouse	mouse	NN
cord-004862-yv76yvy5	200	3	L1	l1	NN
cord-004862-yv76yvy5	200	4	sequence	sequence	NN
cord-004862-yv76yvy5	200	5	is	be	VBZ
cord-004862-yv76yvy5	200	6	ATA	ATA	NNP
cord-004862-yv76yvy5	200	7	at	at	IN
cord-004862-yv76yvy5	200	8	positions	position	NNS
cord-004862-yv76yvy5	200	9	1235	1235	CD
cord-004862-yv76yvy5	200	10	-	-	SYM
cord-004862-yv76yvy5	200	11	1237	1237	CD
cord-004862-yv76yvy5	200	12	;	;	:
cord-004862-yv76yvy5	200	13	this	this	DT
cord-004862-yv76yvy5	200	14	same	same	JJ
cord-004862-yv76yvy5	200	15	sequence	sequence	NN
cord-004862-yv76yvy5	200	16	is	be	VBZ
cord-004862-yv76yvy5	200	17	found	find	VBN
cord-004862-yv76yvy5	200	18	in	in	IN
cord-004862-yv76yvy5	200	19	three	three	CD
cord-004862-yv76yvy5	200	20	sequenced	sequence	VBN
cord-004862-yv76yvy5	200	21	members	member	NNS
cord-004862-yv76yvy5	200	22	of	of	IN
cord-004862-yv76yvy5	200	23	the	the	DT
cord-004862-yv76yvy5	200	24	L1Md	L1Md	NNP
cord-004862-yv76yvy5	200	25	family	family	NN
cord-004862-yv76yvy5	200	26	(	(	-LRB-
cord-004862-yv76yvy5	200	27	Shehee	Shehee	NNP
cord-004862-yv76yvy5	200	28	et	et	NNP
cord-004862-yv76yvy5	200	29	al	al	NNP
cord-004862-yv76yvy5	200	30	.	.	NNP
cord-004862-yv76yvy5	200	31	1987	1987	CD
cord-004862-yv76yvy5	200	32	)	)	-RRB-
cord-004862-yv76yvy5	200	33	.	.	.
cord-004862-yv76yvy5	201	1	Therefore	therefore	RB
cord-004862-yv76yvy5	201	2	,	,	,
cord-004862-yv76yvy5	201	3	the	the	DT
cord-004862-yv76yvy5	201	4	overlap	overlap	NN
cord-004862-yv76yvy5	201	5	between	between	IN
cord-004862-yv76yvy5	201	6	reading	read	VBG
cord-004862-yv76yvy5	201	7	frames	frame	NNS
cord-004862-yv76yvy5	201	8	1	1	CD
cord-004862-yv76yvy5	201	9	and	and	CC
cord-004862-yv76yvy5	201	10	2	2	CD
cord-004862-yv76yvy5	201	11	are	be	VBP
cord-004862-yv76yvy5	201	12	conserved	conserve	VBN
cord-004862-yv76yvy5	201	13	in	in	IN
cord-004862-yv76yvy5	201	14	mouse	mouse	NN
cord-004862-yv76yvy5	201	15	Lls	Lls	NNP
cord-004862-yv76yvy5	201	16	,	,	,
cord-004862-yv76yvy5	201	17	but	but	CC
cord-004862-yv76yvy5	201	18	the	the	DT
cord-004862-yv76yvy5	201	19	overlaps	overlap	NNS
cord-004862-yv76yvy5	201	20	are	be	VBP
cord-004862-yv76yvy5	201	21	not	not	RB
cord-004862-yv76yvy5	201	22	seen	see	VBN
cord-004862-yv76yvy5	201	23	in	in	IN
cord-004862-yv76yvy5	201	24	the	the	DT
cord-004862-yv76yvy5	201	25	rabbit	rabbit	NN
cord-004862-yv76yvy5	201	26	and	and	CC
cord-004862-yv76yvy5	201	27	human	human	JJ
cord-004862-yv76yvy5	201	28	L1	L1	NNP
cord-004862-yv76yvy5	201	29	sequences	sequence	NNS
cord-004862-yv76yvy5	201	30	.	.	.
cord-004862-yv76yvy5	202	1	The	the	DT
cord-004862-yv76yvy5	202	2	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	202	3	sequence	sequence	NN
cord-004862-yv76yvy5	202	4	is	be	VBZ
cord-004862-yv76yvy5	202	5	a	a	DT
cord-004862-yv76yvy5	202	6	composite	composite	NN
cord-004862-yv76yvy5	202	7	of	of	IN
cord-004862-yv76yvy5	202	8	conserved	conserved	JJ
cord-004862-yv76yvy5	202	9	and	and	CC
cord-004862-yv76yvy5	202	10	nonconserved	nonconserved	JJ
cord-004862-yv76yvy5	202	11	regions	region	NNS
cord-004862-yv76yvy5	202	12	.	.	.
cord-004862-yv76yvy5	203	1	As	as	IN
cord-004862-yv76yvy5	203	2	shown	show	VBN
cord-004862-yv76yvy5	203	3	diagrammatically	diagrammatically	RB
cord-004862-yv76yvy5	203	4	in	in	IN
cord-004862-yv76yvy5	203	5	Fig	Fig	NNP
cord-004862-yv76yvy5	203	6	.	.	NNP
cord-004862-yv76yvy5	203	7	9	9	CD
cord-004862-yv76yvy5	203	8	,	,	,
cord-004862-yv76yvy5	203	9	codons	codon	NNS
cord-004862-yv76yvy5	203	10	79	79	CD
cord-004862-yv76yvy5	203	11	-	-	SYM
cord-004862-yv76yvy5	203	12	294	294	CD
cord-004862-yv76yvy5	203	13	are	be	VBP
cord-004862-yv76yvy5	203	14	highly	highly	RB
cord-004862-yv76yvy5	203	15	related	relate	VBN
cord-004862-yv76yvy5	203	16	between	between	IN
cord-004862-yv76yvy5	203	17	species	specie	NNS
cord-004862-yv76yvy5	203	18	in	in	IN
cord-004862-yv76yvy5	203	19	different	different	JJ
cord-004862-yv76yvy5	203	20	mammalian	mammalian	JJ
cord-004862-yv76yvy5	203	21	orders	order	NNS
cord-004862-yv76yvy5	203	22	,	,	,
cord-004862-yv76yvy5	203	23	and	and	CC
cord-004862-yv76yvy5	203	24	a	a	DT
cord-004862-yv76yvy5	203	25	long	long	JJ
cord-004862-yv76yvy5	203	26	segment	segment	NN
cord-004862-yv76yvy5	203	27	from	from	IN
cord-004862-yv76yvy5	203	28	codons	codon	NNS
cord-004862-yv76yvy5	203	29	171	171	CD
cord-004862-yv76yvy5	203	30	through	through	IN
cord-004862-yv76yvy5	203	31	294	294	CD
cord-004862-yv76yvy5	203	32	shows	show	NNS
cord-004862-yv76yvy5	203	33	a	a	DT
cord-004862-yv76yvy5	203	34	52	52	CD
cord-004862-yv76yvy5	203	35	-	-	SYM
cord-004862-yv76yvy5	203	36	56	56	CD
cord-004862-yv76yvy5	203	37	%	%	NN
cord-004862-yv76yvy5	203	38	amino	amino	NN
cord-004862-yv76yvy5	203	39	acid	acid	NN
cord-004862-yv76yvy5	203	40	identity	identity	NN
cord-004862-yv76yvy5	203	41	in	in	IN
cord-004862-yv76yvy5	203	42	these	these	DT
cord-004862-yv76yvy5	203	43	comparisons	comparison	NNS
cord-004862-yv76yvy5	203	44	.	.	.
cord-004862-yv76yvy5	204	1	A	a	DT
cord-004862-yv76yvy5	204	2	short	short	JJ
cord-004862-yv76yvy5	204	3	region	region	NN
cord-004862-yv76yvy5	204	4	from	from	IN
cord-004862-yv76yvy5	204	5	codons	codon	NNS
cord-004862-yv76yvy5	204	6	97	97	CD
cord-004862-yv76yvy5	204	7	to	to	TO
cord-004862-yv76yvy5	204	8	122	122	CD
cord-004862-yv76yvy5	204	9	is	be	VBZ
cord-004862-yv76yvy5	204	10	not	not	RB
cord-004862-yv76yvy5	204	11	conserved	conserve	VBN
cord-004862-yv76yvy5	204	12	,	,	,
cord-004862-yv76yvy5	204	13	nor	nor	CC
cord-004862-yv76yvy5	204	14	are	be	VBP
cord-004862-yv76yvy5	204	15	the	the	DT
cord-004862-yv76yvy5	204	16	last	last	JJ
cord-004862-yv76yvy5	204	17	14	14	CD
cord-004862-yv76yvy5	204	18	codons	codon	NNS
cord-004862-yv76yvy5	204	19	in	in	IN
cord-004862-yv76yvy5	204	20	the	the	DT
cord-004862-yv76yvy5	204	21	sequence	sequence	NN
cord-004862-yv76yvy5	204	22	,	,	,
cord-004862-yv76yvy5	204	23	but	but	CC
cord-004862-yv76yvy5	204	24	in	in	IN
cord-004862-yv76yvy5	204	25	general	general	JJ
cord-004862-yv76yvy5	204	26	the	the	DT
cord-004862-yv76yvy5	204	27	C	C	NNP
cord-004862-yv76yvy5	204	28	-	-	HYPH
cord-004862-yv76yvy5	204	29	terminal	terminal	NN
cord-004862-yv76yvy5	204	30	two	two	CD
cord-004862-yv76yvy5	204	31	-	-	HYPH
cord-004862-yv76yvy5	204	32	thirds	third	NNS
cord-004862-yv76yvy5	204	33	of	of	IN
cord-004862-yv76yvy5	204	34	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	204	35	is	be	VBZ
cord-004862-yv76yvy5	204	36	conserved	conserve	VBN
cord-004862-yv76yvy5	204	37	between	between	IN
cord-004862-yv76yvy5	204	38	orders	order	NNS
cord-004862-yv76yvy5	204	39	.	.	.
cord-004862-yv76yvy5	205	1	A	a	DT
cord-004862-yv76yvy5	205	2	search	search	NN
cord-004862-yv76yvy5	205	3	through	through	IN
cord-004862-yv76yvy5	205	4	the	the	DT
cord-004862-yv76yvy5	205	5	databanks	databank	NNS
cord-004862-yv76yvy5	205	6	at	at	IN
cord-004862-yv76yvy5	205	7	the	the	DT
cord-004862-yv76yvy5	205	8	Protein	Protein	NNP
cord-004862-yv76yvy5	205	9	Identification	Identification	NNP
cord-004862-yv76yvy5	205	10	Resource	Resource	NNP
cord-004862-yv76yvy5	205	11	(	(	-LRB-
cord-004862-yv76yvy5	205	12	National	National	NNP
cord-004862-yv76yvy5	205	13	Biomedical	Biomedical	NNP
cord-004862-yv76yvy5	205	14	Research	Research	NNP
cord-004862-yv76yvy5	205	15	Foundation	Foundation	NNP
cord-004862-yv76yvy5	205	16	)	)	-RRB-
cord-004862-yv76yvy5	205	17	did	do	VBD
cord-004862-yv76yvy5	205	18	not	not	RB
cord-004862-yv76yvy5	205	19	identify	identify	VB
cord-004862-yv76yvy5	205	20	any	any	DT
cord-004862-yv76yvy5	205	21	known	know	VBN
cord-004862-yv76yvy5	205	22	proteins	protein	NNS
cord-004862-yv76yvy5	205	23	(	(	-LRB-
cord-004862-yv76yvy5	205	24	besides	besides	IN
cord-004862-yv76yvy5	205	25	the	the	DT
cord-004862-yv76yvy5	205	26	L1	L1	NNP
cord-004862-yv76yvy5	205	27	proteins	protein	NNS
cord-004862-yv76yvy5	205	28	)	)	-RRB-
cord-004862-yv76yvy5	206	1	that	that	WDT
cord-004862-yv76yvy5	206	2	are	be	VBP
cord-004862-yv76yvy5	206	3	related	relate	VBN
cord-004862-yv76yvy5	206	4	to	to	IN
cord-004862-yv76yvy5	206	5	the	the	DT
cord-004862-yv76yvy5	206	6	C	C	NNP
cord-004862-yv76yvy5	206	7	-	-	HYPH
cord-004862-yv76yvy5	206	8	terminal	terminal	NN
cord-004862-yv76yvy5	206	9	half	half	NN
cord-004862-yv76yvy5	206	10	of	of	IN
cord-004862-yv76yvy5	206	11	the	the	DT
cord-004862-yv76yvy5	206	12	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	206	13	sequence	sequence	NN
cord-004862-yv76yvy5	206	14	.	.	.
cord-004862-yv76yvy5	207	1	(	(	-LRB-
cord-004862-yv76yvy5	207	2	Lipman	Lipman	NNP
cord-004862-yv76yvy5	207	3	and	and	CC
cord-004862-yv76yvy5	207	4	Pearson	Pearson	NNP
cord-004862-yv76yvy5	207	5	1985	1985	CD
cord-004862-yv76yvy5	207	6	)	)	-RRB-
cord-004862-yv76yvy5	207	7	is	be	VBZ
cord-004862-yv76yvy5	207	8	shown	show	VBN
cord-004862-yv76yvy5	207	9	starting	start	VBG
cord-004862-yv76yvy5	207	10	at	at	IN
cord-004862-yv76yvy5	207	11	amino	amino	NN
cord-004862-yv76yvy5	207	12	acid	acid	NN
cord-004862-yv76yvy5	207	13	position	position	NN
cord-004862-yv76yvy5	207	14	1	1	CD
cord-004862-yv76yvy5	207	15	of	of	IN
cord-004862-yv76yvy5	207	16	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	207	17	from	from	IN
cord-004862-yv76yvy5	207	18	L1Oc5	L1Oc5	NNP
cord-004862-yv76yvy5	207	19	(	(	-LRB-
cord-004862-yv76yvy5	207	20	Fig	Fig	NNP
cord-004862-yv76yvy5	207	21	.	.	.
cord-004862-yv76yvy5	207	22	8)	8)	NNP
cord-004862-yv76yvy5	208	1	and	and	CC
cord-004862-yv76yvy5	208	2	position	position	VB
cord-004862-yv76yvy5	208	3	303	303	CD
cord-004862-yv76yvy5	208	4	of	of	IN
cord-004862-yv76yvy5	208	5	the	the	DT
cord-004862-yv76yvy5	208	6	sequence	sequence	NN
cord-004862-yv76yvy5	208	7	of	of	IN
cord-004862-yv76yvy5	208	8	type	type	NN
cord-004862-yv76yvy5	208	9	II	II	NNP
cord-004862-yv76yvy5	208	10	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	208	11	keratin	keratin	NN
cord-004862-yv76yvy5	208	12	of	of	IN
cord-004862-yv76yvy5	208	13	humans	human	NNS
cord-004862-yv76yvy5	208	14	(	(	-LRB-
cord-004862-yv76yvy5	208	15	Johnson	Johnson	NNP
cord-004862-yv76yvy5	208	16	el	el	NNP
cord-004862-yv76yvy5	208	17	al	al	NNP
cord-004862-yv76yvy5	208	18	.	.	.
cord-004862-yv76yvy5	208	19	1985	1985	CD
cord-004862-yv76yvy5	208	20	)	)	-RRB-
cord-004862-yv76yvy5	208	21	.	.	.
cord-004862-yv76yvy5	209	1	The	the	DT
cord-004862-yv76yvy5	209	2	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	209	3	sequence	sequence	NN
cord-004862-yv76yvy5	209	4	of	of	IN
cord-004862-yv76yvy5	209	5	rabbit	rabbit	NN
cord-004862-yv76yvy5	209	6	L1	L1	NNP
cord-004862-yv76yvy5	209	7	is	be	VBZ
cord-004862-yv76yvy5	209	8	labeled	label	VBN
cord-004862-yv76yvy5	209	9	LI	LI	NNP
cord-004862-yv76yvy5	209	10	,	,	,
cord-004862-yv76yvy5	209	11	and	and	CC
cord-004862-yv76yvy5	209	12	the	the	DT
cord-004862-yv76yvy5	209	13	type	type	NN
cord-004862-yv76yvy5	209	14	II	II	NNP
cord-004862-yv76yvy5	209	15	keratin	keratin	NN
cord-004862-yv76yvy5	209	16	sequence	sequence	NN
cord-004862-yv76yvy5	209	17	is	be	VBZ
cord-004862-yv76yvy5	209	18	labeled	label	VBN
cord-004862-yv76yvy5	209	19	KII	KII	NNP
cord-004862-yv76yvy5	209	20	.	.	.
cord-004862-yv76yvy5	210	1	Identical	identical	JJ
cord-004862-yv76yvy5	210	2	amino	amino	JJ
cord-004862-yv76yvy5	210	3	acids	acid	NNS
cord-004862-yv76yvy5	210	4	are	be	VBP
cord-004862-yv76yvy5	210	5	indicated	indicate	VBN
cord-004862-yv76yvy5	210	6	by	by	IN
cord-004862-yv76yvy5	210	7	colons	colon	NNS
cord-004862-yv76yvy5	210	8	,	,	,
cord-004862-yv76yvy5	210	9	and	and	CC
cord-004862-yv76yvy5	210	10	similar	similar	JJ
cord-004862-yv76yvy5	210	11	amino	amino	JJ
cord-004862-yv76yvy5	210	12	acids	acid	NNS
cord-004862-yv76yvy5	210	13	are	be	VBP
cord-004862-yv76yvy5	210	14	indicated	indicate	VBN
cord-004862-yv76yvy5	210	15	by	by	IN
cord-004862-yv76yvy5	210	16	periods	period	NNS
cord-004862-yv76yvy5	210	17	.	.	.
cord-004862-yv76yvy5	211	1	The	the	DT
cord-004862-yv76yvy5	211	2	following	follow	VBG
cord-004862-yv76yvy5	211	3	groups	group	NNS
cord-004862-yv76yvy5	211	4	of	of	IN
cord-004862-yv76yvy5	211	5	amino	amino	JJ
cord-004862-yv76yvy5	211	6	acids	acid	NNS
cord-004862-yv76yvy5	211	7	are	be	VBP
cord-004862-yv76yvy5	211	8	considered	consider	VBN
cord-004862-yv76yvy5	211	9	similar	similar	JJ
cord-004862-yv76yvy5	211	10	:	:	:
cord-004862-yv76yvy5	211	11	P	p	NN
cord-004862-yv76yvy5	211	12	,	,	,
cord-004862-yv76yvy5	211	13	A	A	NNP
cord-004862-yv76yvy5	211	14	,	,	,
cord-004862-yv76yvy5	211	15	G	G	NNP
cord-004862-yv76yvy5	211	16	,	,	,
cord-004862-yv76yvy5	211	17	S	S	NNP
cord-004862-yv76yvy5	211	18	,	,	,
cord-004862-yv76yvy5	211	19	and	and	CC
cord-004862-yv76yvy5	211	20	T	T	NNP
cord-004862-yv76yvy5	211	21	(	(	-LRB-
cord-004862-yv76yvy5	211	22	neutral	neutral	JJ
cord-004862-yv76yvy5	211	23	or	or	CC
cord-004862-yv76yvy5	211	24	weakly	weakly	RB
cord-004862-yv76yvy5	211	25	hydrophobic	hydrophobic	JJ
cord-004862-yv76yvy5	211	26	)	)	-RRB-
cord-004862-yv76yvy5	211	27	;	;	:
cord-004862-yv76yvy5	211	28	Q	Q	NNP
cord-004862-yv76yvy5	211	29	,	,	,
cord-004862-yv76yvy5	211	30	N	N	NNP
cord-004862-yv76yvy5	211	31	,	,	,
cord-004862-yv76yvy5	211	32	E	E	NNP
cord-004862-yv76yvy5	211	33	,	,	,
cord-004862-yv76yvy5	211	34	and	and	CC
cord-004862-yv76yvy5	211	35	D	D	NNP
cord-004862-yv76yvy5	211	36	(	(	-LRB-
cord-004862-yv76yvy5	211	37	acids	acid	NNS
cord-004862-yv76yvy5	211	38	and	and	CC
cord-004862-yv76yvy5	211	39	amides	amide	NNS
cord-004862-yv76yvy5	211	40	)	)	-RRB-
cord-004862-yv76yvy5	211	41	;	;	:
cord-004862-yv76yvy5	211	42	H	H	NNP
cord-004862-yv76yvy5	211	43	,	,	,
cord-004862-yv76yvy5	211	44	K	K	NNP
cord-004862-yv76yvy5	211	45	,	,	,
cord-004862-yv76yvy5	211	46	and	and	CC
cord-004862-yv76yvy5	211	47	R	r	NN
cord-004862-yv76yvy5	211	48	(	(	-LRB-
cord-004862-yv76yvy5	211	49	basic	basic	NNP
cord-004862-yv76yvy5	211	50	)	)	-RRB-
cord-004862-yv76yvy5	211	51	;	;	:
cord-004862-yv76yvy5	211	52	L	L	NNP
cord-004862-yv76yvy5	211	53	,	,	,
cord-004862-yv76yvy5	211	54	I	-PRON-	PRP
cord-004862-yv76yvy5	211	55	,	,	,
cord-004862-yv76yvy5	211	56	V	v	NN
cord-004862-yv76yvy5	211	57	,	,	,
cord-004862-yv76yvy5	211	58	and	and	CC
cord-004862-yv76yvy5	211	59	M	M	NNP
cord-004862-yv76yvy5	211	60	(	(	-LRB-
cord-004862-yv76yvy5	211	61	hydrophobic	hydrophobic	NNP
cord-004862-yv76yvy5	211	62	)	)	-RRB-
cord-004862-yv76yvy5	211	63	;	;	:
cord-004862-yv76yvy5	211	64	F	F	NNP
cord-004862-yv76yvy5	211	65	,	,	,
cord-004862-yv76yvy5	211	66	Y	Y	NNP
cord-004862-yv76yvy5	211	67	,	,	,
cord-004862-yv76yvy5	211	68	and	and	CC
cord-004862-yv76yvy5	211	69	W	W	NNP
cord-004862-yv76yvy5	211	70	(	(	-LRB-
cord-004862-yv76yvy5	211	71	aromatic	aromatic	JJ
cord-004862-yv76yvy5	211	72	)	)	-RRB-
cord-004862-yv76yvy5	211	73	;	;	:
cord-004862-yv76yvy5	211	74	and	and	CC
cord-004862-yv76yvy5	211	75	C.	C.	NNP
cord-004862-yv76yvy5	212	1	In	in	IN
cord-004862-yv76yvy5	212	2	contrast	contrast	NN
cord-004862-yv76yvy5	212	3	,	,	,
cord-004862-yv76yvy5	212	4	the	the	DT
cord-004862-yv76yvy5	212	5	N	n	CD
cord-004862-yv76yvy5	212	6	-	-	HYPH
cord-004862-yv76yvy5	212	7	terminal	terminal	JJ
cord-004862-yv76yvy5	212	8	portion	portion	NN
cord-004862-yv76yvy5	212	9	of	of	IN
cord-004862-yv76yvy5	212	10	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	212	11	is	be	VBZ
cord-004862-yv76yvy5	212	12	not	not	RB
cord-004862-yv76yvy5	212	13	highly	highly	RB
cord-004862-yv76yvy5	212	14	conserved	conserve	VBN
cord-004862-yv76yvy5	212	15	between	between	IN
cord-004862-yv76yvy5	212	16	mammalian	mammalian	JJ
cord-004862-yv76yvy5	212	17	orders	order	NNS
cord-004862-yv76yvy5	212	18	.	.	.
cord-004862-yv76yvy5	213	1	This	this	DT
cord-004862-yv76yvy5	213	2	region	region	NN
cord-004862-yv76yvy5	213	3	shows	show	VBZ
cord-004862-yv76yvy5	213	4	almost	almost	RB
cord-004862-yv76yvy5	213	5	no	no	DT
cord-004862-yv76yvy5	213	6	similarity	similarity	NN
cord-004862-yv76yvy5	213	7	between	between	IN
cord-004862-yv76yvy5	213	8	rabbit	rabbit	NN
cord-004862-yv76yvy5	213	9	and	and	CC
cord-004862-yv76yvy5	213	10	human	human	JJ
cord-004862-yv76yvy5	213	11	(	(	-LRB-
cord-004862-yv76yvy5	213	12	sequence	sequence	NN
cord-004862-yv76yvy5	213	13	between	between	IN
cord-004862-yv76yvy5	213	14	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	213	15	positions	position	NNS
cord-004862-yv76yvy5	213	16	3	3	CD
cord-004862-yv76yvy5	213	17	and	and	CC
cord-004862-yv76yvy5	213	18	476	476	CD
cord-004862-yv76yvy5	213	19	in	in	IN
cord-004862-yv76yvy5	213	20	Fig	Fig	NNP
cord-004862-yv76yvy5	213	21	.	.	.
cord-004862-yv76yvy5	214	1	8	8	CD
cord-004862-yv76yvy5	214	2	;	;	:
cord-004862-yv76yvy5	214	3	Fig	Fig	NNP
cord-004862-yv76yvy5	214	4	.	.	.
cord-004862-yv76yvy5	214	5	9	9	CD
cord-004862-yv76yvy5	214	6	)	)	-RRB-
cord-004862-yv76yvy5	214	7	,	,	,
cord-004862-yv76yvy5	214	8	and	and	CC
cord-004862-yv76yvy5	215	1	the	the	DT
cord-004862-yv76yvy5	215	2	comparison	comparison	NN
cord-004862-yv76yvy5	215	3	between	between	IN
cord-004862-yv76yvy5	215	4	rabbit	rabbit	NN
cord-004862-yv76yvy5	215	5	and	and	CC
cord-004862-yv76yvy5	215	6	mouse	mouse	NN
cord-004862-yv76yvy5	215	7	shows	show	VBZ
cord-004862-yv76yvy5	215	8	only	only	RB
cord-004862-yv76yvy5	215	9	a	a	DT
cord-004862-yv76yvy5	215	10	short	short	JJ
cord-004862-yv76yvy5	215	11	segment	segment	NN
cord-004862-yv76yvy5	215	12	of	of	IN
cord-004862-yv76yvy5	215	13	matching	match	VBG
cord-004862-yv76yvy5	215	14	sequence	sequence	NN
cord-004862-yv76yvy5	215	15	at	at	IN
cord-004862-yv76yvy5	215	16	the	the	DT
cord-004862-yv76yvy5	215	17	5	5	CD
cord-004862-yv76yvy5	215	18	'	'	NN
cord-004862-yv76yvy5	215	19	end	end	NN
cord-004862-yv76yvy5	215	20	(	(	-LRB-
cord-004862-yv76yvy5	215	21	Figs	fig	NNS
cord-004862-yv76yvy5	215	22	.	.	.
cord-004862-yv76yvy5	215	23	8	8	CD
cord-004862-yv76yvy5	215	24	and	and	CC
cord-004862-yv76yvy5	215	25	9	9	CD
cord-004862-yv76yvy5	215	26	)	)	-RRB-
cord-004862-yv76yvy5	215	27	.	.	.
cord-004862-yv76yvy5	216	1	The	the	DT
cord-004862-yv76yvy5	216	2	dissimilarity	dissimilarity	NN
cord-004862-yv76yvy5	216	3	of	of	IN
cord-004862-yv76yvy5	216	4	the	the	DT
cord-004862-yv76yvy5	216	5	sequences	sequence	NNS
cord-004862-yv76yvy5	216	6	makes	make	VBZ
cord-004862-yv76yvy5	216	7	it	-PRON-	PRP
cord-004862-yv76yvy5	216	8	difficult	difficult	JJ
cord-004862-yv76yvy5	216	9	to	to	TO
cord-004862-yv76yvy5	216	10	assign	assign	VB
cord-004862-yv76yvy5	216	11	a	a	DT
cord-004862-yv76yvy5	216	12	start	start	NN
cord-004862-yv76yvy5	216	13	point	point	NN
cord-004862-yv76yvy5	216	14	to	to	IN
cord-004862-yv76yvy5	216	15	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	216	16	.	.	.
cord-004862-yv76yvy5	217	1	However	however	RB
cord-004862-yv76yvy5	217	2	,	,	,
cord-004862-yv76yvy5	217	3	an	an	DT
cord-004862-yv76yvy5	217	4	ATG	ATG	NNP
cord-004862-yv76yvy5	217	5	is	be	VBZ
cord-004862-yv76yvy5	217	6	found	find	VBN
cord-004862-yv76yvy5	217	7	in	in	IN
cord-004862-yv76yvy5	217	8	the	the	DT
cord-004862-yv76yvy5	217	9	rabbit	rabbit	NN
cord-004862-yv76yvy5	217	10	,	,	,
cord-004862-yv76yvy5	217	11	mouse	mouse	NN
cord-004862-yv76yvy5	217	12	,	,	,
cord-004862-yv76yvy5	217	13	and	and	CC
cord-004862-yv76yvy5	217	14	rat	rat	NN
cord-004862-yv76yvy5	217	15	sequences	sequence	NNS
cord-004862-yv76yvy5	217	16	at	at	IN
cord-004862-yv76yvy5	217	17	positions	position	NNS
cord-004862-yv76yvy5	217	18	240	240	CD
cord-004862-yv76yvy5	217	19	-	-	SYM
cord-004862-yv76yvy5	217	20	242	242	CD
cord-004862-yv76yvy5	217	21	of	of	IN
cord-004862-yv76yvy5	217	22	Fig	Fig	NNP
cord-004862-yv76yvy5	217	23	.	.	.
cord-004862-yv76yvy5	217	24	8	8	CD
cord-004862-yv76yvy5	218	1	(	(	-LRB-
cord-004862-yv76yvy5	218	2	shown	show	VBN
cord-004862-yv76yvy5	218	3	in	in	IN
cord-004862-yv76yvy5	218	4	boldface	boldface	NN
cord-004862-yv76yvy5	218	5	)	)	-RRB-
cord-004862-yv76yvy5	218	6	.	.	.
cord-004862-yv76yvy5	219	1	An	an	DT
cord-004862-yv76yvy5	219	2	ATG	ATG	NNP
cord-004862-yv76yvy5	219	3	is	be	VBZ
cord-004862-yv76yvy5	219	4	found	find	VBN
cord-004862-yv76yvy5	219	5	three	three	CD
cord-004862-yv76yvy5	219	6	codons	codon	NNS
cord-004862-yv76yvy5	219	7	downstream	downstream	JJ
cord-004862-yv76yvy5	219	8	in	in	IN
cord-004862-yv76yvy5	219	9	the	the	DT
cord-004862-yv76yvy5	219	10	human	human	JJ
cord-004862-yv76yvy5	219	11	L1	L1	NNP
cord-004862-yv76yvy5	219	12	sequence	sequence	NN
cord-004862-yv76yvy5	219	13	.	.	.
cord-004862-yv76yvy5	220	1	Other	other	JJ
cord-004862-yv76yvy5	220	2	ATG	ATG	NNP
cord-004862-yv76yvy5	220	3	codons	codon	NNS
cord-004862-yv76yvy5	220	4	are	be	VBP
cord-004862-yv76yvy5	220	5	either	either	CC
cord-004862-yv76yvy5	220	6	immediately	immediately	RB
cord-004862-yv76yvy5	220	7	adjacent	adjacent	JJ
cord-004862-yv76yvy5	220	8	(	(	-LRB-
cord-004862-yv76yvy5	220	9	mouse	mouse	NN
cord-004862-yv76yvy5	220	10	and	and	CC
cord-004862-yv76yvy5	220	11	rat	rat	NN
cord-004862-yv76yvy5	220	12	)	)	-RRB-
cord-004862-yv76yvy5	220	13	or	or	CC
cord-004862-yv76yvy5	220	14	are	be	VBP
cord-004862-yv76yvy5	220	15	20	20	CD
cord-004862-yv76yvy5	220	16	codons	codon	NNS
cord-004862-yv76yvy5	220	17	upstream	upstream	JJ
cord-004862-yv76yvy5	220	18	(	(	-LRB-
cord-004862-yv76yvy5	220	19	rabbit	rabbit	NN
cord-004862-yv76yvy5	220	20	,	,	,
cord-004862-yv76yvy5	220	21	underlined	underline	VBN
cord-004862-yv76yvy5	220	22	in	in	IN
cord-004862-yv76yvy5	220	23	Fig	Fig	NNP
cord-004862-yv76yvy5	220	24	.	.	.
cord-004862-yv76yvy5	220	25	8)	8)	NNP
cord-004862-yv76yvy5	220	26	.	.	.
cord-004862-yv76yvy5	221	1	The	the	DT
cord-004862-yv76yvy5	221	2	ATG	ATG	NNP
cord-004862-yv76yvy5	221	3	at	at	IN
cord-004862-yv76yvy5	221	4	positions	position	NNS
cord-004862-yv76yvy5	221	5	240	240	CD
cord-004862-yv76yvy5	221	6	-	-	SYM
cord-004862-yv76yvy5	221	7	242	242	CD
cord-004862-yv76yvy5	221	8	has	have	VBZ
cord-004862-yv76yvy5	221	9	been	be	VBN
cord-004862-yv76yvy5	221	10	tentatively	tentatively	RB
cord-004862-yv76yvy5	221	11	assigned	assign	VBN
cord-004862-yv76yvy5	221	12	as	as	IN
cord-004862-yv76yvy5	221	13	the	the	DT
cord-004862-yv76yvy5	221	14	start	start	NN
cord-004862-yv76yvy5	221	15	of	of	IN
cord-004862-yv76yvy5	221	16	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	221	17	,	,	,
cord-004862-yv76yvy5	221	18	and	and	CC
cord-004862-yv76yvy5	221	19	the	the	DT
cord-004862-yv76yvy5	221	20	codons	codon	NNS
cord-004862-yv76yvy5	221	21	in	in	IN
cord-004862-yv76yvy5	221	22	Fig	Fig	NNP
cord-004862-yv76yvy5	221	23	.	.	.
cord-004862-yv76yvy5	222	1	8	8	CD
cord-004862-yv76yvy5	222	2	are	be	VBP
cord-004862-yv76yvy5	222	3	numbered	number	VBN
cord-004862-yv76yvy5	222	4	starting	start	VBG
cord-004862-yv76yvy5	222	5	here	here	RB
cord-004862-yv76yvy5	222	6	.	.	.
cord-004862-yv76yvy5	223	1	This	this	DT
cord-004862-yv76yvy5	223	2	is	be	VBZ
cord-004862-yv76yvy5	223	3	71	71	CD
cord-004862-yv76yvy5	223	4	codons	codon	NNS
cord-004862-yv76yvy5	223	5	into	into	IN
cord-004862-yv76yvy5	223	6	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	223	7	as	as	IN
cord-004862-yv76yvy5	223	8	defined	define	VBN
cord-004862-yv76yvy5	223	9	by	by	IN
cord-004862-yv76yvy5	223	10	Loeb	Loeb	NNP
cord-004862-yv76yvy5	223	11	et	et	NNP
cord-004862-yv76yvy5	223	12	al	al	NNP
cord-004862-yv76yvy5	223	13	.	.	.
cord-004862-yv76yvy5	224	1	(	(	-LRB-
cord-004862-yv76yvy5	224	2	1986	1986	CD
cord-004862-yv76yvy5	224	3	)	)	-RRB-
cord-004862-yv76yvy5	224	4	.	.	.
cord-004862-yv76yvy5	225	1	Although	although	IN
cord-004862-yv76yvy5	225	2	the	the	DT
cord-004862-yv76yvy5	225	3	N	n	CD
cord-004862-yv76yvy5	225	4	-	-	HYPH
cord-004862-yv76yvy5	225	5	terminal	terminal	JJ
cord-004862-yv76yvy5	225	6	half	half	NN
cord-004862-yv76yvy5	225	7	of	of	IN
cord-004862-yv76yvy5	225	8	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	225	9	differs	differ	VBZ
cord-004862-yv76yvy5	225	10	among	among	IN
cord-004862-yv76yvy5	225	11	rabbits	rabbit	NNS
cord-004862-yv76yvy5	225	12	,	,	,
cord-004862-yv76yvy5	225	13	mouse	mouse	NN
cord-004862-yv76yvy5	225	14	,	,	,
cord-004862-yv76yvy5	225	15	and	and	CC
cord-004862-yv76yvy5	225	16	humans	human	NNS
cord-004862-yv76yvy5	225	17	,	,	,
cord-004862-yv76yvy5	225	18	it	-PRON-	PRP
cord-004862-yv76yvy5	225	19	is	be	VBZ
cord-004862-yv76yvy5	225	20	similar	similar	JJ
cord-004862-yv76yvy5	225	21	between	between	IN
cord-004862-yv76yvy5	225	22	the	the	DT
cord-004862-yv76yvy5	225	23	two	two	CD
cord-004862-yv76yvy5	225	24	rodents	rodent	NNS
cord-004862-yv76yvy5	225	25	,	,	,
cord-004862-yv76yvy5	225	26	mouse	mouse	NN
cord-004862-yv76yvy5	225	27	and	and	CC
cord-004862-yv76yvy5	225	28	rat	rat	NN
cord-004862-yv76yvy5	225	29	.	.	.
cord-004862-yv76yvy5	226	1	This	this	DT
cord-004862-yv76yvy5	226	2	region	region	NN
cord-004862-yv76yvy5	226	3	surrounds	surround	VBZ
cord-004862-yv76yvy5	226	4	a	a	DT
cord-004862-yv76yvy5	226	5	66-bp	66-bp	CD
cord-004862-yv76yvy5	226	6	tandemly	tandemly	NNP
cord-004862-yv76yvy5	226	7	repeated	repeat	VBN
cord-004862-yv76yvy5	226	8	sequence	sequence	NN
cord-004862-yv76yvy5	226	9	in	in	IN
cord-004862-yv76yvy5	226	10	L1Rn	L1Rn	NNP
cord-004862-yv76yvy5	226	11	(	(	-LRB-
cord-004862-yv76yvy5	226	12	Soares	Soares	NNP
cord-004862-yv76yvy5	226	13	et	et	NNP
cord-004862-yv76yvy5	226	14	al	al	NNP
cord-004862-yv76yvy5	226	15	.	.	.
cord-004862-yv76yvy5	226	16	1985	1985	CD
cord-004862-yv76yvy5	226	17	;	;	:
cord-004862-yv76yvy5	226	18	D'Ambrosio	D'Ambrosio	NNP
cord-004862-yv76yvy5	226	19	et	et	NNP
cord-004862-yv76yvy5	226	20	al	al	NNP
cord-004862-yv76yvy5	226	21	.	.	NNP
cord-004862-yv76yvy5	226	22	1986	1986	CD
cord-004862-yv76yvy5	226	23	)	)	-RRB-
cord-004862-yv76yvy5	226	24	and	and	CC
cord-004862-yv76yvy5	226	25	contains	contain	VBZ
cord-004862-yv76yvy5	226	26	several	several	JJ
cord-004862-yv76yvy5	226	27	in	in	IN
cord-004862-yv76yvy5	226	28	-	-	HYPH
cord-004862-yv76yvy5	226	29	frame	frame	NN
cord-004862-yv76yvy5	226	30	stop	stop	NN
cord-004862-yv76yvy5	226	31	codons	codon	NNS
cord-004862-yv76yvy5	226	32	in	in	IN
cord-004862-yv76yvy5	226	33	L1Rn	l1rn	XX
cord-004862-yv76yvy5	227	1	(	(	-LRB-
cord-004862-yv76yvy5	227	2	Fig	Fig	NNP
cord-004862-yv76yvy5	227	3	.	.	.
cord-004862-yv76yvy5	227	4	8)	8)	NNP
cord-004862-yv76yvy5	227	5	.	.	.
cord-004862-yv76yvy5	228	1	It	-PRON-	PRP
cord-004862-yv76yvy5	228	2	is	be	VBZ
cord-004862-yv76yvy5	228	3	possible	possible	JJ
cord-004862-yv76yvy5	228	4	that	that	IN
cord-004862-yv76yvy5	228	5	the	the	DT
cord-004862-yv76yvy5	228	6	coding	code	VBG
cord-004862-yv76yvy5	228	7	function	function	NN
cord-004862-yv76yvy5	228	8	of	of	IN
cord-004862-yv76yvy5	228	9	this	this	DT
cord-004862-yv76yvy5	228	10	region	region	NN
cord-004862-yv76yvy5	228	11	has	have	VBZ
cord-004862-yv76yvy5	228	12	been	be	VBN
cord-004862-yv76yvy5	228	13	lost	lose	VBN
cord-004862-yv76yvy5	228	14	in	in	IN
cord-004862-yv76yvy5	228	15	L1Rn	l1rn	CD
cord-004862-yv76yvy5	228	16	.	.	.
cord-004862-yv76yvy5	229	1	The	the	DT
cord-004862-yv76yvy5	229	2	N	N	NNP
cord-004862-yv76yvy5	229	3	-	-	HYPH
cord-004862-yv76yvy5	229	4	terminal	terminal	JJ
cord-004862-yv76yvy5	229	5	half	half	NN
cord-004862-yv76yvy5	229	6	of	of	IN
cord-004862-yv76yvy5	229	7	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	229	8	from	from	IN
cord-004862-yv76yvy5	229	9	the	the	DT
cord-004862-yv76yvy5	229	10	rabbit	rabbit	NN
cord-004862-yv76yvy5	229	11	L	l	NN
cord-004862-yv76yvy5	229	12	1	1	CD
cord-004862-yv76yvy5	229	13	sequence	sequence	NN
cord-004862-yv76yvy5	229	14	is	be	VBZ
cord-004862-yv76yvy5	229	15	related	relate	VBN
cord-004862-yv76yvy5	229	16	to	to	IN
cord-004862-yv76yvy5	229	17	type	type	NN
cord-004862-yv76yvy5	229	18	II	II	NNP
cord-004862-yv76yvy5	229	19	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	229	20	keratin	keratin	NN
cord-004862-yv76yvy5	229	21	.	.	.
cord-004862-yv76yvy5	230	1	Protein	protein	NN
cord-004862-yv76yvy5	230	2	sequence	sequence	NN
cord-004862-yv76yvy5	230	3	databanks	databank	NNS
cord-004862-yv76yvy5	230	4	were	be	VBD
cord-004862-yv76yvy5	230	5	searched	search	VBN
cord-004862-yv76yvy5	230	6	using	use	VBG
cord-004862-yv76yvy5	230	7	the	the	DT
cord-004862-yv76yvy5	230	8	FASTp	fastp	NN
cord-004862-yv76yvy5	230	9	program	program	NN
cord-004862-yv76yvy5	230	10	(	(	-LRB-
cord-004862-yv76yvy5	230	11	Lipman	Lipman	NNP
cord-004862-yv76yvy5	230	12	and	and	CC
cord-004862-yv76yvy5	230	13	Pearson	Pearson	NNP
cord-004862-yv76yvy5	230	14	1985	1985	CD
cord-004862-yv76yvy5	230	15	)	)	-RRB-
cord-004862-yv76yvy5	230	16	,	,	,
cord-004862-yv76yvy5	230	17	and	and	CC
cord-004862-yv76yvy5	230	18	a	a	DT
cord-004862-yv76yvy5	230	19	significant	significant	JJ
cord-004862-yv76yvy5	230	20	match	match	NN
cord-004862-yv76yvy5	230	21	was	be	VBD
cord-004862-yv76yvy5	230	22	found	find	VBN
cord-004862-yv76yvy5	230	23	with	with	IN
cord-004862-yv76yvy5	230	24	type	type	NN
cord-004862-yv76yvy5	230	25	II	II	NNP
cord-004862-yv76yvy5	230	26	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	230	27	keratin	keratin	NN
cord-004862-yv76yvy5	230	28	.	.	.
cord-004862-yv76yvy5	231	1	The	the	DT
cord-004862-yv76yvy5	231	2	region	region	NN
cord-004862-yv76yvy5	231	3	of	of	IN
cord-004862-yv76yvy5	231	4	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	231	5	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	231	6	that	that	IN
cord-004862-yv76yvy5	231	7	matches	match	VBZ
cord-004862-yv76yvy5	231	8	with	with	IN
cord-004862-yv76yvy5	231	9	keratin	keratin	NN
cord-004862-yv76yvy5	231	10	,	,	,
cord-004862-yv76yvy5	231	11	along	along	IN
cord-004862-yv76yvy5	231	12	with	with	IN
cord-004862-yv76yvy5	231	13	the	the	DT
cord-004862-yv76yvy5	231	14	percent	percent	NN
cord-004862-yv76yvy5	231	15	amino	amino	NN
cord-004862-yv76yvy5	231	16	acid	acid	NN
cord-004862-yv76yvy5	231	17	identity	identity	NN
cord-004862-yv76yvy5	231	18	,	,	,
cord-004862-yv76yvy5	231	19	is	be	VBZ
cord-004862-yv76yvy5	231	20	shown	show	VBN
cord-004862-yv76yvy5	231	21	in	in	IN
cord-004862-yv76yvy5	231	22	Fig	Fig	NNP
cord-004862-yv76yvy5	231	23	.	.	NNP
cord-004862-yv76yvy5	231	24	9	9	CD
cord-004862-yv76yvy5	231	25	,	,	,
cord-004862-yv76yvy5	231	26	and	and	CC
cord-004862-yv76yvy5	231	27	the	the	DT
cord-004862-yv76yvy5	231	28	alignment	alignment	NN
cord-004862-yv76yvy5	231	29	with	with	IN
cord-004862-yv76yvy5	231	30	the	the	DT
cord-004862-yv76yvy5	231	31	human	human	JJ
cord-004862-yv76yvy5	231	32	67	67	CD
cord-004862-yv76yvy5	231	33	kDa	kDa	NNP
cord-004862-yv76yvy5	231	34	type	type	NN
cord-004862-yv76yvy5	231	35	II	II	NNP
cord-004862-yv76yvy5	231	36	keratin	keratin	NN
cord-004862-yv76yvy5	231	37	)	)	-RRB-
cord-004862-yv76yvy5	231	38	is	be	VBZ
cord-004862-yv76yvy5	231	39	shown	show	VBN
cord-004862-yv76yvy5	231	40	in	in	IN
cord-004862-yv76yvy5	231	41	Fig	Fig	NNP
cord-004862-yv76yvy5	231	42	.	.	.
cord-004862-yv76yvy5	232	1	10	10	CD
cord-004862-yv76yvy5	232	2	.	.	.
cord-004862-yv76yvy5	233	1	The	the	DT
cord-004862-yv76yvy5	233	2	sequences	sequence	NNS
cord-004862-yv76yvy5	233	3	align	align	VBP
cord-004862-yv76yvy5	233	4	OVer	over	IN
cord-004862-yv76yvy5	233	5	a	a	DT
cord-004862-yv76yvy5	233	6	156-amino	156-amino	CD
cord-004862-yv76yvy5	233	7	acid	acid	NN
cord-004862-yv76yvy5	233	8	region	region	NN
cord-004862-yv76yvy5	233	9	,	,	,
cord-004862-yv76yvy5	233	10	with	with	IN
cord-004862-yv76yvy5	233	11	an	an	DT
cord-004862-yv76yvy5	233	12	average	average	NN
cord-004862-yv76yvy5	233	13	of	of	IN
cord-004862-yv76yvy5	233	14	20.5	20.5	CD
cord-004862-yv76yvy5	233	15	%	%	NN
cord-004862-yv76yvy5	233	16	identity	identity	NN
cord-004862-yv76yvy5	233	17	.	.	.
cord-004862-yv76yvy5	234	1	The	the	DT
cord-004862-yv76yvy5	234	2	segment	segment	NN
cord-004862-yv76yvy5	234	3	between	between	IN
cord-004862-yv76yvy5	234	4	amino	amino	NN
cord-004862-yv76yvy5	234	5	acid	acid	NN
cord-004862-yv76yvy5	234	6	positions	position	NNS
cord-004862-yv76yvy5	234	7	95	95	CD
cord-004862-yv76yvy5	234	8	and	and	CC
cord-004862-yv76yvy5	234	9	126	126	CD
cord-004862-yv76yvy5	235	1	ofLIOc	ofLIOc	NNP
cord-004862-yv76yvy5	236	1	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	236	2	is	be	VBZ
cord-004862-yv76yvy5	236	3	most	most	RBS
cord-004862-yv76yvy5	236	4	similar	similar	JJ
cord-004862-yv76yvy5	236	5	to	to	IN
cord-004862-yv76yvy5	236	6	type	type	NN
cord-004862-yv76yvy5	236	7	II	II	NNP
cord-004862-yv76yvy5	236	8	keratin	keratin	NN
cord-004862-yv76yvy5	236	9	;	;	:
cord-004862-yv76yvy5	236	10	this	this	DT
cord-004862-yv76yvy5	236	11	segment	segment	NN
cord-004862-yv76yvy5	236	12	contains	contain	VBZ
cord-004862-yv76yvy5	236	13	identical	identical	JJ
cord-004862-yv76yvy5	236	14	amino	amino	JJ
cord-004862-yv76yvy5	236	15	acids	acid	NNS
cord-004862-yv76yvy5	236	16	at	at	IN
cord-004862-yv76yvy5	236	17	32	32	CD
cord-004862-yv76yvy5	236	18	%	%	NN
cord-004862-yv76yvy5	236	19	of	of	IN
cord-004862-yv76yvy5	236	20	the	the	DT
cord-004862-yv76yvy5	236	21	positions	position	NNS
cord-004862-yv76yvy5	236	22	.	.	.
cord-004862-yv76yvy5	237	1	The	the	DT
cord-004862-yv76yvy5	237	2	similarity	similarity	NN
cord-004862-yv76yvy5	237	3	between	between	IN
cord-004862-yv76yvy5	237	4	the	the	DT
cord-004862-yv76yvy5	237	5	N	n	CD
cord-004862-yv76yvy5	237	6	-	-	HYPH
cord-004862-yv76yvy5	237	7	terminal	terminal	JJ
cord-004862-yv76yvy5	237	8	half	half	NN
cord-004862-yv76yvy5	237	9	of	of	IN
cord-004862-yv76yvy5	237	10	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	237	11	from	from	IN
cord-004862-yv76yvy5	237	12	L10c	L10c	NNP
cord-004862-yv76yvy5	237	13	and	and	CC
cord-004862-yv76yvy5	237	14	type	type	NN
cord-004862-yv76yvy5	237	15	II	II	NNP
cord-004862-yv76yvy5	237	16	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	237	17	keratin	keratin	NN
cord-004862-yv76yvy5	237	18	is	be	VBZ
cord-004862-yv76yvy5	237	19	statistically	statistically	RB
cord-004862-yv76yvy5	237	20	significant	significant	JJ
cord-004862-yv76yvy5	237	21	.	.	.
cord-004862-yv76yvy5	238	1	The	the	DT
cord-004862-yv76yvy5	238	2	sequence	sequence	NN
cord-004862-yv76yvy5	238	3	of	of	IN
cord-004862-yv76yvy5	238	4	the	the	DT
cord-004862-yv76yvy5	238	5	type	type	NN
cord-004862-yv76yvy5	238	6	II	II	NNP
cord-004862-yv76yvy5	238	7	keratin	keratin	NN
cord-004862-yv76yvy5	238	8	was	be	VBD
cord-004862-yv76yvy5	238	9	scrambled	scramble	VBN
cord-004862-yv76yvy5	238	10	into	into	IN
cord-004862-yv76yvy5	238	11	20	20	CD
cord-004862-yv76yvy5	238	12	different	different	JJ
cord-004862-yv76yvy5	238	13	sequences	sequence	NNS
cord-004862-yv76yvy5	238	14	and	and	CC
cord-004862-yv76yvy5	238	15	aligned	align	VBN
cord-004862-yv76yvy5	238	16	with	with	IN
cord-004862-yv76yvy5	238	17	the	the	DT
cord-004862-yv76yvy5	238	18	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	238	19	sequence	sequence	NN
cord-004862-yv76yvy5	238	20	to	to	TO
cord-004862-yv76yvy5	238	21	generate	generate	VB
cord-004862-yv76yvy5	238	22	an	an	DT
cord-004862-yv76yvy5	238	23	average	average	JJ
cord-004862-yv76yvy5	238	24	match	match	NN
cord-004862-yv76yvy5	238	25	score	score	NN
cord-004862-yv76yvy5	238	26	.	.	.
cord-004862-yv76yvy5	239	1	The	the	DT
cord-004862-yv76yvy5	239	2	match	match	NN
cord-004862-yv76yvy5	239	3	score	score	NN
cord-004862-yv76yvy5	239	4	with	with	IN
cord-004862-yv76yvy5	239	5	the	the	DT
cord-004862-yv76yvy5	239	6	true	true	JJ
cord-004862-yv76yvy5	239	7	keratin	keratin	NN
cord-004862-yv76yvy5	239	8	sequence	sequence	NN
cord-004862-yv76yvy5	239	9	is	be	VBZ
cord-004862-yv76yvy5	239	10	13	13	CD
cord-004862-yv76yvy5	239	11	standard	standard	JJ
cord-004862-yv76yvy5	239	12	deviations	deviation	NNS
cord-004862-yv76yvy5	239	13	above	above	IN
cord-004862-yv76yvy5	239	14	the	the	DT
cord-004862-yv76yvy5	239	15	average	average	JJ
cord-004862-yv76yvy5	239	16	match	match	NN
cord-004862-yv76yvy5	239	17	score	score	NN
cord-004862-yv76yvy5	239	18	with	with	IN
cord-004862-yv76yvy5	239	19	the	the	DT
cord-004862-yv76yvy5	239	20	scrambled	scramble	VBN
cord-004862-yv76yvy5	239	21	sequences	sequence	NNS
cord-004862-yv76yvy5	239	22	;	;	:
cord-004862-yv76yvy5	239	23	a	a	DT
cord-004862-yv76yvy5	239	24	difference	difference	NN
cord-004862-yv76yvy5	239	25	of	of	IN
cord-004862-yv76yvy5	239	26	10	10	CD
cord-004862-yv76yvy5	239	27	standard	standard	JJ
cord-004862-yv76yvy5	239	28	deviations	deviation	NNS
cord-004862-yv76yvy5	239	29	in	in	IN
cord-004862-yv76yvy5	239	30	this	this	DT
cord-004862-yv76yvy5	239	31	test	test	NN
cord-004862-yv76yvy5	239	32	is	be	VBZ
cord-004862-yv76yvy5	239	33	an	an	DT
cord-004862-yv76yvy5	239	34	indicator	indicator	NN
cord-004862-yv76yvy5	239	35	of	of	IN
cord-004862-yv76yvy5	239	36	a	a	DT
cord-004862-yv76yvy5	239	37	significant	significant	JJ
cord-004862-yv76yvy5	239	38	evolutionary	evolutionary	JJ
cord-004862-yv76yvy5	239	39	relationship	relationship	NN
cord-004862-yv76yvy5	239	40	(	(	-LRB-
cord-004862-yv76yvy5	239	41	Lipman	Lipman	NNP
cord-004862-yv76yvy5	239	42	and	and	CC
cord-004862-yv76yvy5	239	43	Pearson	Pearson	NNP
cord-004862-yv76yvy5	239	44	1985	1985	CD
cord-004862-yv76yvy5	239	45	)	)	-RRB-
cord-004862-yv76yvy5	239	46	.	.	.
cord-004862-yv76yvy5	240	1	Although	although	IN
cord-004862-yv76yvy5	240	2	statistical	statistical	JJ
cord-004862-yv76yvy5	240	3	significance	significance	NN
cord-004862-yv76yvy5	240	4	does	do	VBZ
cord-004862-yv76yvy5	240	5	not	not	RB
cord-004862-yv76yvy5	240	6	establish	establish	VB
cord-004862-yv76yvy5	240	7	biological	biological	JJ
cord-004862-yv76yvy5	240	8	significance	significance	NN
cord-004862-yv76yvy5	240	9	,	,	,
cord-004862-yv76yvy5	240	10	it	-PRON-	PRP
cord-004862-yv76yvy5	240	11	is	be	VBZ
cord-004862-yv76yvy5	240	12	helpful	helpful	JJ
cord-004862-yv76yvy5	240	13	to	to	TO
cord-004862-yv76yvy5	240	14	compare	compare	VB
cord-004862-yv76yvy5	240	15	this	this	DT
cord-004862-yv76yvy5	240	16	match	match	NN
cord-004862-yv76yvy5	240	17	with	with	IN
cord-004862-yv76yvy5	240	18	that	that	DT
cord-004862-yv76yvy5	240	19	of	of	IN
cord-004862-yv76yvy5	240	20	a	a	DT
cord-004862-yv76yvy5	240	21	part	part	NN
cord-004862-yv76yvy5	240	22	of	of	IN
cord-004862-yv76yvy5	240	23	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	240	24	with	with	IN
cord-004862-yv76yvy5	240	25	reverse	reverse	JJ
cord-004862-yv76yvy5	240	26	transcriptases	transcriptase	NNS
cord-004862-yv76yvy5	240	27	whose	whose	WP$
cord-004862-yv76yvy5	240	28	similarity	similarity	NN
cord-004862-yv76yvy5	240	29	has	have	VBZ
cord-004862-yv76yvy5	240	30	been	be	VBN
cord-004862-yv76yvy5	240	31	cited	cite	VBN
cord-004862-yv76yvy5	240	32	as	as	IN
cord-004862-yv76yvy5	240	33	significant	significant	JJ
cord-004862-yv76yvy5	240	34	in	in	IN
cord-004862-yv76yvy5	240	35	the	the	DT
cord-004862-yv76yvy5	240	36	past	past	NN
cord-004862-yv76yvy5	241	1	(	(	-LRB-
cord-004862-yv76yvy5	241	2	Hattori	Hattori	NNP
cord-004862-yv76yvy5	241	3	et	et	NNP
cord-004862-yv76yvy5	241	4	al	al	NNP
cord-004862-yv76yvy5	241	5	.	.	.
cord-004862-yv76yvy5	242	1	1986	1986	CD
cord-004862-yv76yvy5	242	2	;	;	:
cord-004862-yv76yvy5	242	3	Loeb	Loeb	NNP
cord-004862-yv76yvy5	242	4	et	et	NNP
cord-004862-yv76yvy5	242	5	al	al	NNP
cord-004862-yv76yvy5	242	6	.	.	NNP
cord-004862-yv76yvy5	242	7	1986	1986	CD
cord-004862-yv76yvy5	242	8	)	)	-RRB-
cord-004862-yv76yvy5	243	1	9	9	CD
cord-004862-yv76yvy5	244	1	The	the	DT
cord-004862-yv76yvy5	244	2	alignment	alignment	NN
cord-004862-yv76yvy5	244	3	between	between	IN
cord-004862-yv76yvy5	244	4	the	the	DT
cord-004862-yv76yvy5	244	5	L1Md	L1Md	NNP
cord-004862-yv76yvy5	244	6	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	244	7	sequence	sequence	NN
cord-004862-yv76yvy5	244	8	and	and	CC
cord-004862-yv76yvy5	244	9	the	the	DT
cord-004862-yv76yvy5	244	10	sequence	sequence	NN
cord-004862-yv76yvy5	244	11	of	of	IN
cord-004862-yv76yvy5	244	12	reverse	reverse	JJ
cord-004862-yv76yvy5	244	13	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	244	14	from	from	IN
cord-004862-yv76yvy5	244	15	Moloney	Moloney	NNP
cord-004862-yv76yvy5	244	16	murine	murine	JJ
cord-004862-yv76yvy5	244	17	leukemia	leukemia	NN
cord-004862-yv76yvy5	244	18	virus	virus	NN
cord-004862-yv76yvy5	244	19	shows	show	VBZ
cord-004862-yv76yvy5	244	20	17.5	17.5	CD
cord-004862-yv76yvy5	244	21	%	%	NN
cord-004862-yv76yvy5	244	22	amino	amino	NN
cord-004862-yv76yvy5	244	23	acid	acid	NN
cord-004862-yv76yvy5	244	24	identity	identity	NN
cord-004862-yv76yvy5	244	25	,	,	,
cord-004862-yv76yvy5	244	26	whereas	whereas	IN
cord-004862-yv76yvy5	244	27	the	the	DT
cord-004862-yv76yvy5	244	28	alignment	alignment	NN
cord-004862-yv76yvy5	244	29	between	between	IN
cord-004862-yv76yvy5	244	30	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	244	31	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	244	32	and	and	CC
cord-004862-yv76yvy5	244	33	type	type	NN
cord-004862-yv76yvy5	244	34	II	II	NNP
cord-004862-yv76yvy5	244	35	keratin	keratin	NN
cord-004862-yv76yvy5	244	36	shows	show	VBZ
cord-004862-yv76yvy5	244	37	20.5	20.5	CD
cord-004862-yv76yvy5	244	38	%	%	NN
cord-004862-yv76yvy5	244	39	identity	identity	NN
cord-004862-yv76yvy5	244	40	.	.	.
cord-004862-yv76yvy5	245	1	It	-PRON-	PRP
cord-004862-yv76yvy5	245	2	is	be	VBZ
cord-004862-yv76yvy5	245	3	apparent	apparent	JJ
cord-004862-yv76yvy5	245	4	that	that	IN
cord-004862-yv76yvy5	245	5	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	245	6	of	of	IN
cord-004862-yv76yvy5	245	7	the	the	DT
cord-004862-yv76yvy5	245	8	rabbit	rabbit	NN
cord-004862-yv76yvy5	245	9	LI	LI	NNP
cord-004862-yv76yvy5	245	10	contains	contain	VBZ
cord-004862-yv76yvy5	245	11	a	a	DT
cord-004862-yv76yvy5	245	12	region	region	NN
cord-004862-yv76yvy5	245	13	related	relate	VBN
cord-004862-yv76yvy5	245	14	in	in	IN
cord-004862-yv76yvy5	245	15	sequence	sequence	NN
cord-004862-yv76yvy5	245	16	to	to	IN
cord-004862-yv76yvy5	245	17	type	type	NN
cord-004862-yv76yvy5	245	18	II	II	NNP
cord-004862-yv76yvy5	245	19	cytoskeletal	cytoskeletal	JJ
cord-004862-yv76yvy5	245	20	keratin	keratin	NN
cord-004862-yv76yvy5	245	21	.	.	.
cord-004862-yv76yvy5	246	1	The	the	DT
cord-004862-yv76yvy5	246	2	propagation	propagation	NN
cord-004862-yv76yvy5	246	3	of	of	IN
cord-004862-yv76yvy5	246	4	L1	L1	NNP
cord-004862-yv76yvy5	246	5	repeats	repeat	VBZ
cord-004862-yv76yvy5	246	6	probably	probably	RB
cord-004862-yv76yvy5	246	7	has	have	VBZ
cord-004862-yv76yvy5	246	8	occurred	occur	VBN
cord-004862-yv76yvy5	246	9	independently	independently	RB
cord-004862-yv76yvy5	246	10	in	in	IN
cord-004862-yv76yvy5	246	11	different	different	JJ
cord-004862-yv76yvy5	246	12	mammalian	mammalian	JJ
cord-004862-yv76yvy5	246	13	gehomes	gehome	NNS
cord-004862-yv76yvy5	246	14	.	.	.
cord-004862-yv76yvy5	247	1	Although	although	IN
cord-004862-yv76yvy5	247	2	the	the	DT
cord-004862-yv76yvy5	247	3	L1	L1	NNP
cord-004862-yv76yvy5	247	4	repeats	repeat	VBZ
cord-004862-yv76yvy5	247	5	from	from	IN
cord-004862-yv76yvy5	247	6	lagomorphs	lagomorph	NNS
cord-004862-yv76yvy5	247	7	,	,	,
cord-004862-yv76yvy5	247	8	rodents	rodent	NNS
cord-004862-yv76yvy5	247	9	,	,	,
cord-004862-yv76yvy5	247	10	and	and	CC
cord-004862-yv76yvy5	247	11	primates	primate	NNS
cord-004862-yv76yvy5	247	12	are	be	VBP
cord-004862-yv76yvy5	247	13	similar	similar	JJ
cord-004862-yv76yvy5	247	14	in	in	IN
cord-004862-yv76yvy5	247	15	size	size	NN
cord-004862-yv76yvy5	247	16	and	and	CC
cord-004862-yv76yvy5	247	17	sequence	sequence	NN
cord-004862-yv76yvy5	247	18	organization	organization	NN
cord-004862-yv76yvy5	247	19	,	,	,
cord-004862-yv76yvy5	247	20	the	the	DT
cord-004862-yv76yvy5	247	21	5	5	CD
cord-004862-yv76yvy5	247	22	'	'	''
cord-004862-yv76yvy5	247	23	and	and	CC
cord-004862-yv76yvy5	247	24	3	3	CD
cord-004862-yv76yvy5	247	25	'	'	POS
cord-004862-yv76yvy5	247	26	ends	end	NNS
cord-004862-yv76yvy5	247	27	are	be	VBP
cord-004862-yv76yvy5	247	28	distinctive	distinctive	JJ
cord-004862-yv76yvy5	247	29	(	(	-LRB-
cord-004862-yv76yvy5	247	30	summarized	summarize	VBN
cord-004862-yv76yvy5	247	31	in	in	IN
cord-004862-yv76yvy5	247	32	Fig	Fig	NNP
cord-004862-yv76yvy5	247	33	.	.	NNP
cord-004862-yv76yvy5	247	34	11	11	CD
cord-004862-yv76yvy5	247	35	)	)	-RRB-
cord-004862-yv76yvy5	247	36	.	.	.
cord-004862-yv76yvy5	248	1	Also	also	RB
cord-004862-yv76yvy5	248	2	,	,	,
cord-004862-yv76yvy5	248	3	the	the	DT
cord-004862-yv76yvy5	248	4	LI	LI	NNP
cord-004862-yv76yvy5	248	5	repeats	repeat	VBZ
cord-004862-yv76yvy5	248	6	I	-PRON-	PRP
cord-004862-yv76yvy5	248	7	 	 	_SP
cord-004862-yv76yvy5	249	1	I	-PRON-	PRP
cord-004862-yv76yvy5	249	2	 	 	_SP
cord-004862-yv76yvy5	250	1	I	-PRON-	PRP
cord-004862-yv76yvy5	250	2	 	 	_SP
cord-004862-yv76yvy5	251	1	I	-PRON-	PRP
cord-004862-yv76yvy5	251	2	 	 	_SP
cord-004862-yv76yvy5	252	1	I	-PRON-	PRP
cord-004862-yv76yvy5	252	2	 	 	_SP
cord-004862-yv76yvy5	253	1	I	-PRON-	PRP
cord-004862-yv76yvy5	253	2	 	 	_SP
cord-004862-yv76yvy5	254	1	I	-PRON-	PRP
cord-004862-yv76yvy5	254	2	 	 	_SP
cord-004862-yv76yvy5	255	1	I	-PRON-	PRP
cord-004862-yv76yvy5	255	2	are	be	VBP
cord-004862-yv76yvy5	255	3	located	locate	VBN
cord-004862-yv76yvy5	255	4	in	in	IN
cord-004862-yv76yvy5	255	5	different	different	JJ
cord-004862-yv76yvy5	255	6	positions	position	NNS
cord-004862-yv76yvy5	255	7	in	in	IN
cord-004862-yv76yvy5	255	8	orthologous	orthologous	JJ
cord-004862-yv76yvy5	255	9	regions	region	NNS
cord-004862-yv76yvy5	255	10	of	of	IN
cord-004862-yv76yvy5	255	11	chromosomes	chromosome	NNS
cord-004862-yv76yvy5	255	12	,	,	,
cord-004862-yv76yvy5	255	13	specifically	specifically	RB
cord-004862-yv76yvy5	255	14	the	the	DT
cord-004862-yv76yvy5	255	15	B	B	NNP
cord-004862-yv76yvy5	255	16	-	-	HYPH
cord-004862-yv76yvy5	255	17	like	like	JJ
cord-004862-yv76yvy5	255	18	globin	globin	NN
cord-004862-yv76yvy5	255	19	gene	gene	NN
cord-004862-yv76yvy5	255	20	cluster	cluster	NN
cord-004862-yv76yvy5	255	21	of	of	IN
cord-004862-yv76yvy5	255	22	rabbits	rabbit	NNS
cord-004862-yv76yvy5	255	23	and	and	CC
cord-004862-yv76yvy5	255	24	humans	human	NNS
cord-004862-yv76yvy5	255	25	(	(	-LRB-
cord-004862-yv76yvy5	256	1	Margot.el	Margot.el	NNP
cord-004862-yv76yvy5	256	2	al	al	NNP
cord-004862-yv76yvy5	256	3	.	.	.
cord-004862-yv76yvy5	257	1	1989	1989	LS
cord-004862-yv76yvy5	257	2	)	)	-RRB-
cord-004862-yv76yvy5	257	3	and	and	CC
cord-004862-yv76yvy5	257	4	mice	mouse	NNS
cord-004862-yv76yvy5	258	1	(	(	-LRB-
cord-004862-yv76yvy5	258	2	Shehee	Shehee	NNP
cord-004862-yv76yvy5	258	3	et	et	NNP
cord-004862-yv76yvy5	258	4	al	al	NNP
cord-004862-yv76yvy5	258	5	.	.	NNP
cord-004862-yv76yvy5	258	6	1989	1989	CD
cord-004862-yv76yvy5	258	7	)	)	-RRB-
cord-004862-yv76yvy5	258	8	.	.	.
cord-004862-yv76yvy5	259	1	Because	because	IN
cord-004862-yv76yvy5	259	2	the	the	DT
cord-004862-yv76yvy5	259	3	contemporary	contemporary	JJ
cord-004862-yv76yvy5	259	4	/3-like	/3-like	NNP
cord-004862-yv76yvy5	259	5	globin	globin	NN
cord-004862-yv76yvy5	259	6	gene	gene	NN
cord-004862-yv76yvy5	259	7	clusters	cluster	NNS
cord-004862-yv76yvy5	259	8	are	be	VBP
cord-004862-yv76yvy5	259	9	descended	descend	VBN
cord-004862-yv76yvy5	259	10	from	from	IN
cord-004862-yv76yvy5	259	11	a	a	DT
cord-004862-yv76yvy5	259	12	preexisting	preexist	VBG
cord-004862-yv76yvy5	259	13	gene	gene	NN
cord-004862-yv76yvy5	259	14	cluster	cluster	NN
cord-004862-yv76yvy5	259	15	in	in	IN
cord-004862-yv76yvy5	259	16	the	the	DT
cord-004862-yv76yvy5	259	17	last	last	JJ
cord-004862-yv76yvy5	259	18	common	common	JJ
cord-004862-yv76yvy5	259	19	ancestor	ancestor	NN
cord-004862-yv76yvy5	259	20	,	,	,
cord-004862-yv76yvy5	259	21	the	the	DT
cord-004862-yv76yvy5	259	22	presence	presence	NN
cord-004862-yv76yvy5	259	23	of	of	IN
cord-004862-yv76yvy5	259	24	L1	L1	NNP
cord-004862-yv76yvy5	259	25	repeats	repeat	VBZ
cord-004862-yv76yvy5	259	26	at	at	IN
cord-004862-yv76yvy5	259	27	different	different	JJ
cord-004862-yv76yvy5	259	28	positions	position	NNS
cord-004862-yv76yvy5	259	29	in	in	IN
cord-004862-yv76yvy5	259	30	different	different	JJ
cord-004862-yv76yvy5	259	31	species	specie	NNS
cord-004862-yv76yvy5	259	32	indicates	indicate	VBZ
cord-004862-yv76yvy5	259	33	that	that	IN
cord-004862-yv76yvy5	259	34	the	the	DT
cord-004862-yv76yvy5	259	35	L1	L1	NNP
cord-004862-yv76yvy5	259	36	repeats	repeat	NNS
cord-004862-yv76yvy5	259	37	have	have	VBP
cord-004862-yv76yvy5	259	38	integrated	integrate	VBN
cord-004862-yv76yvy5	259	39	independently	independently	RB
cord-004862-yv76yvy5	259	40	into	into	IN
cord-004862-yv76yvy5	259	41	these	these	DT
cord-004862-yv76yvy5	259	42	gene	gene	NN
cord-004862-yv76yvy5	259	43	clusters	cluster	NNS
cord-004862-yv76yvy5	259	44	(	(	-LRB-
cord-004862-yv76yvy5	259	45	and	and	CC
cord-004862-yv76yvy5	259	46	probably	probably	RB
cord-004862-yv76yvy5	259	47	the	the	DT
cord-004862-yv76yvy5	259	48	whole	whole	JJ
cord-004862-yv76yvy5	259	49	genome	genome	NN
cord-004862-yv76yvy5	259	50	)	)	-RRB-
cord-004862-yv76yvy5	259	51	is	be	VBZ
cord-004862-yv76yvy5	259	52	each	each	DT
cord-004862-yv76yvy5	259	53	species	specie	NNS
cord-004862-yv76yvy5	259	54	.	.	.
cord-004862-yv76yvy5	260	1	It	-PRON-	PRP
cord-004862-yv76yvy5	260	2	is	be	VBZ
cord-004862-yv76yvy5	260	3	noteworthy	noteworthy	JJ
cord-004862-yv76yvy5	260	4	,	,	,
cord-004862-yv76yvy5	260	5	therefore	therefore	RB
cord-004862-yv76yvy5	260	6	,	,	,
cord-004862-yv76yvy5	260	7	that	that	IN
cord-004862-yv76yvy5	260	8	the	the	DT
cord-004862-yv76yvy5	260	9	structure	structure	NN
cord-004862-yv76yvy5	260	10	of	of	IN
cord-004862-yv76yvy5	260	11	the	the	DT
cord-004862-yv76yvy5	260	12	population	population	NN
cord-004862-yv76yvy5	260	13	of	of	IN
cord-004862-yv76yvy5	260	14	L1	L1	NNP
cord-004862-yv76yvy5	260	15	repeats	repeat	VBZ
cord-004862-yv76yvy5	260	16	is	be	VBZ
cord-004862-yv76yvy5	260	17	quite	quite	RB
cord-004862-yv76yvy5	260	18	similar	similar	JJ
cord-004862-yv76yvy5	260	19	in	in	IN
cord-004862-yv76yvy5	260	20	several	several	JJ
cord-004862-yv76yvy5	260	21	mammals	mammal	NNS
cord-004862-yv76yvy5	260	22	.	.	.
cord-004862-yv76yvy5	261	1	Most	Most	JJS
cord-004862-yv76yvy5	261	2	members	member	NNS
cord-004862-yv76yvy5	261	3	of	of	IN
cord-004862-yv76yvy5	261	4	the	the	DT
cord-004862-yv76yvy5	261	5	L1	L1	NNP
cord-004862-yv76yvy5	261	6	repeat	repeat	NN
cord-004862-yv76yvy5	261	7	family	family	NN
cord-004862-yv76yvy5	261	8	in	in	IN
cord-004862-yv76yvy5	261	9	rabbits	rabbit	NNS
cord-004862-yv76yvy5	261	10	(	(	-LRB-
cord-004862-yv76yvy5	261	11	this	this	DT
cord-004862-yv76yvy5	261	12	paper	paper	NN
cord-004862-yv76yvy5	261	13	)	)	-RRB-
cord-004862-yv76yvy5	261	14	,	,	,
cord-004862-yv76yvy5	261	15	mouse	mouse	NN
cord-004862-yv76yvy5	261	16	(	(	-LRB-
cord-004862-yv76yvy5	261	17	Voliva	Voliva	NNP
cord-004862-yv76yvy5	261	18	et	et	FW
cord-004862-yv76yvy5	261	19	al	al	NNP
cord-004862-yv76yvy5	261	20	.	.	.
cord-004862-yv76yvy5	261	21	1983	1983	CD
cord-004862-yv76yvy5	261	22	)	)	-RRB-
cord-004862-yv76yvy5	261	23	,	,	,
cord-004862-yv76yvy5	261	24	and	and	CC
cord-004862-yv76yvy5	261	25	monkeys	monkey	NNS
cord-004862-yv76yvy5	261	26	(	(	-LRB-
cord-004862-yv76yvy5	261	27	Grimaldi	Grimaldi	NNP
cord-004862-yv76yvy5	261	28	et	et	NNP
cord-004862-yv76yvy5	261	29	al	al	NNP
cord-004862-yv76yvy5	261	30	.	.	.
cord-004862-yv76yvy5	261	31	1984	1984	CD
cord-004862-yv76yvy5	261	32	)	)	-RRB-
cord-004862-yv76yvy5	261	33	are	be	VBP
cord-004862-yv76yvy5	261	34	truncated	truncate	VBN
cord-004862-yv76yvy5	261	35	from	from	IN
cord-004862-yv76yvy5	261	36	the	the	DT
cord-004862-yv76yvy5	261	37	5	5	CD
cord-004862-yv76yvy5	261	38	'	'	NN
cord-004862-yv76yvy5	261	39	end	end	NN
cord-004862-yv76yvy5	261	40	,	,	,
cord-004862-yv76yvy5	261	41	resulting	result	VBG
cord-004862-yv76yvy5	261	42	in	in	IN
cord-004862-yv76yvy5	261	43	a	a	DT
cord-004862-yv76yvy5	261	44	higher	high	JJR
cord-004862-yv76yvy5	261	45	frequency	frequency	NN
cord-004862-yv76yvy5	261	46	in	in	IN
cord-004862-yv76yvy5	261	47	the	the	DT
cord-004862-yv76yvy5	261	48	genome	genome	NN
cord-004862-yv76yvy5	261	49	of	of	IN
cord-004862-yv76yvy5	261	50	the	the	DT
cord-004862-yv76yvy5	261	51	3	3	CD
cord-004862-yv76yvy5	261	52	'	'	NN
cord-004862-yv76yvy5	261	53	end	end	NN
cord-004862-yv76yvy5	261	54	of	of	IN
cord-004862-yv76yvy5	261	55	L1	L1	NNP
cord-004862-yv76yvy5	261	56	(	(	-LRB-
cord-004862-yv76yvy5	261	57	about	about	RB
cord-004862-yv76yvy5	261	58	50,000	50,000	CD
cord-004862-yv76yvy5	261	59	copies	copy	NNS
cord-004862-yv76yvy5	261	60	)	)	-RRB-
cord-004862-yv76yvy5	261	61	than	than	IN
cord-004862-yv76yvy5	261	62	the	the	DT
cord-004862-yv76yvy5	261	63	5	5	CD
cord-004862-yv76yvy5	261	64	'	'	NN
cord-004862-yv76yvy5	261	65	end	end	NN
cord-004862-yv76yvy5	261	66	(	(	-LRB-
cord-004862-yv76yvy5	261	67	about	about	RB
cord-004862-yv76yvy5	261	68	10,000	10,000	CD
cord-004862-yv76yvy5	261	69	copies	copy	NNS
cord-004862-yv76yvy5	261	70	)	)	-RRB-
cord-004862-yv76yvy5	261	71	.	.	.
cord-004862-yv76yvy5	262	1	This	this	DT
cord-004862-yv76yvy5	262	2	similarity	similarity	NN
cord-004862-yv76yvy5	262	3	in	in	IN
cord-004862-yv76yvy5	262	4	copy	copy	NN
cord-004862-yv76yvy5	262	5	number	number	NN
cord-004862-yv76yvy5	262	6	suggests	suggest	VBZ
cord-004862-yv76yvy5	262	7	that	that	IN
cord-004862-yv76yvy5	262	8	the	the	DT
cord-004862-yv76yvy5	262	9	time	time	NN
cord-004862-yv76yvy5	262	10	of	of	IN
cord-004862-yv76yvy5	262	11	onset	onset	NN
cord-004862-yv76yvy5	262	12	and	and	CC
cord-004862-yv76yvy5	262	13	the	the	DT
cord-004862-yv76yvy5	262	14	rate	rate	NN
cord-004862-yv76yvy5	262	15	of	of	IN
cord-004862-yv76yvy5	262	16	propagation	propagation	NN
cord-004862-yv76yvy5	262	17	of	of	IN
cord-004862-yv76yvy5	262	18	L1	L1	NNP
cord-004862-yv76yvy5	262	19	repeats	repeat	VBZ
cord-004862-yv76yvy5	262	20	is	be	VBZ
cord-004862-yv76yvy5	262	21	similar	similar	JJ
cord-004862-yv76yvy5	262	22	in	in	IN
cord-004862-yv76yvy5	262	23	the	the	DT
cord-004862-yv76yvy5	262	24	different	different	JJ
cord-004862-yv76yvy5	262	25	species	specie	NNS
cord-004862-yv76yvy5	262	26	.	.	.
cord-004862-yv76yvy5	263	1	The	the	DT
cord-004862-yv76yvy5	263	2	rabbit	rabbit	NN
cord-004862-yv76yvy5	263	3	,	,	,
cord-004862-yv76yvy5	263	4	mouse	mouse	NN
cord-004862-yv76yvy5	263	5	,	,	,
cord-004862-yv76yvy5	263	6	and	and	CC
cord-004862-yv76yvy5	263	7	monkey	monkey	NN
cord-004862-yv76yvy5	263	8	L1	L1	NNP
cord-004862-yv76yvy5	263	9	repeats	repeat	VBZ
cord-004862-yv76yvy5	263	10	also	also	RB
cord-004862-yv76yvy5	263	11	show	show	VBP
cord-004862-yv76yvy5	263	12	a	a	DT
cord-004862-yv76yvy5	263	13	similar	similar	JJ
cord-004862-yv76yvy5	263	14	pattern	pattern	NN
cord-004862-yv76yvy5	263	15	for	for	IN
cord-004862-yv76yvy5	263	16	the	the	DT
cord-004862-yv76yvy5	263	17	increase	increase	NN
cord-004862-yv76yvy5	263	18	in	in	IN
cord-004862-yv76yvy5	263	19	copy	copy	NN
cord-004862-yv76yvy5	263	20	number	number	NN
cord-004862-yv76yvy5	263	21	in	in	IN
cord-004862-yv76yvy5	263	22	which	which	WDT
cord-004862-yv76yvy5	263	23	the	the	DT
cord-004862-yv76yvy5	263	24	5	5	CD
cord-004862-yv76yvy5	263	25	'	'	POS
cord-004862-yv76yvy5	263	26	regions	region	NNS
cord-004862-yv76yvy5	263	27	increase	increase	VB
cord-004862-yv76yvy5	263	28	gradually	gradually	RB
cord-004862-yv76yvy5	263	29	in	in	IN
cord-004862-yv76yvy5	263	30	copy	copy	NN
cord-004862-yv76yvy5	263	31	number	number	NN
cord-004862-yv76yvy5	263	32	before	before	IN
cord-004862-yv76yvy5	263	33	a	a	DT
cord-004862-yv76yvy5	263	34	large	large	JJ
cord-004862-yv76yvy5	263	35	increase	increase	NN
cord-004862-yv76yvy5	263	36	in	in	IN
cord-004862-yv76yvy5	263	37	copy	copy	NN
cord-004862-yv76yvy5	263	38	number	number	NN
cord-004862-yv76yvy5	263	39	at	at	IN
cord-004862-yv76yvy5	263	40	the	the	DT
cord-004862-yv76yvy5	263	41	very	very	JJ
cord-004862-yv76yvy5	263	42	3	3	CD
cord-004862-yv76yvy5	263	43	'	'	''
cord-004862-yv76yvy5	263	44	end	end	NN
cord-004862-yv76yvy5	263	45	.	.	.
cord-004862-yv76yvy5	264	1	This	this	DT
cord-004862-yv76yvy5	264	2	very	very	RB
cord-004862-yv76yvy5	264	3	large	large	JJ
cord-004862-yv76yvy5	264	4	increase	increase	NN
cord-004862-yv76yvy5	264	5	in	in	IN
cord-004862-yv76yvy5	264	6	copy	copy	NN
cord-004862-yv76yvy5	264	7	number	number	NN
cord-004862-yv76yvy5	264	8	in	in	IN
cord-004862-yv76yvy5	264	9	the	the	DT
cord-004862-yv76yvy5	264	10	Y	Y	NNP
cord-004862-yv76yvy5	264	11	region	region	NN
cord-004862-yv76yvy5	264	12	could	could	MD
cord-004862-yv76yvy5	264	13	indicate	indicate	VB
cord-004862-yv76yvy5	264	14	a	a	DT
cord-004862-yv76yvy5	264	15	strong	strong	JJ
cord-004862-yv76yvy5	264	16	stop	stop	NN
cord-004862-yv76yvy5	264	17	for	for	IN
cord-004862-yv76yvy5	264	18	reverse	reverse	JJ
cord-004862-yv76yvy5	264	19	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	264	20	during	during	IN
cord-004862-yv76yvy5	264	21	the	the	DT
cord-004862-yv76yvy5	264	22	conversion	conversion	NN
cord-004862-yv76yvy5	264	23	of	of	IN
cord-004862-yv76yvy5	264	24	the	the	DT
cord-004862-yv76yvy5	264	25	L1	L1	NNP
cord-004862-yv76yvy5	264	26	transcript	transcript	NN
cord-004862-yv76yvy5	264	27	to	to	IN
cord-004862-yv76yvy5	264	28	a	a	DT
cord-004862-yv76yvy5	264	29	DNA	dna	NN
cord-004862-yv76yvy5	264	30	copy	copy	NN
cord-004862-yv76yvy5	264	31	.	.	.
cord-004862-yv76yvy5	265	1	Given	give	VBN
cord-004862-yv76yvy5	265	2	this	this	DT
cord-004862-yv76yvy5	265	3	frequency	frequency	NN
cord-004862-yv76yvy5	265	4	of	of	IN
cord-004862-yv76yvy5	265	5	polar	polar	JJ
cord-004862-yv76yvy5	265	6	truncations	truncation	NNS
cord-004862-yv76yvy5	265	7	of	of	IN
cord-004862-yv76yvy5	265	8	L1	L1	NNP
cord-004862-yv76yvy5	265	9	in	in	IN
cord-004862-yv76yvy5	265	10	rabbits	rabbit	NNS
cord-004862-yv76yvy5	265	11	,	,	,
cord-004862-yv76yvy5	265	12	humans	human	NNS
cord-004862-yv76yvy5	265	13	,	,	,
cord-004862-yv76yvy5	265	14	and	and	CC
cord-004862-yv76yvy5	265	15	mice	mouse	NNS
cord-004862-yv76yvy5	265	16	,	,	,
cord-004862-yv76yvy5	265	17	it	-PRON-	PRP
cord-004862-yv76yvy5	265	18	is	be	VBZ
cord-004862-yv76yvy5	265	19	striking	strike	VBG
cord-004862-yv76yvy5	265	20	that	that	IN
cord-004862-yv76yvy5	265	21	most	most	JJS
cord-004862-yv76yvy5	265	22	of	of	IN
cord-004862-yv76yvy5	265	23	the	the	DT
cord-004862-yv76yvy5	265	24	L1	L1	NNP
cord-004862-yv76yvy5	265	25	repeats	repeat	VBZ
cord-004862-yv76yvy5	265	26	in	in	IN
cord-004862-yv76yvy5	265	27	rats	rat	NNS
cord-004862-yv76yvy5	265	28	are	be	VBP
cord-004862-yv76yvy5	265	29	full	full	JJ
cord-004862-yv76yvy5	265	30	length	length	NN
cord-004862-yv76yvy5	265	31	(	(	-LRB-
cord-004862-yv76yvy5	265	32	D	D	NNP
cord-004862-yv76yvy5	265	33	'	'	''
cord-004862-yv76yvy5	265	34	Am	Am	NNP
cord-004862-yv76yvy5	265	35	-	-	HYPH
cord-004862-yv76yvy5	265	36	brosio	brosio	NNP
cord-004862-yv76yvy5	265	37	et	et	FW
cord-004862-yv76yvy5	265	38	al	al	NNP
cord-004862-yv76yvy5	265	39	.	.	NNP
cord-004862-yv76yvy5	265	40	1986	1986	CD
cord-004862-yv76yvy5	265	41	)	)	-RRB-
cord-004862-yv76yvy5	265	42	.	.	.
cord-004862-yv76yvy5	266	1	Some	some	DT
cord-004862-yv76yvy5	266	2	aspect	aspect	NN
cord-004862-yv76yvy5	266	3	of	of	IN
cord-004862-yv76yvy5	266	4	the	the	DT
cord-004862-yv76yvy5	266	5	mechanism	mechanism	NN
cord-004862-yv76yvy5	266	6	for	for	IN
cord-004862-yv76yvy5	266	7	synthesis	synthesis	NN
cord-004862-yv76yvy5	266	8	and	and	CC
cord-004862-yv76yvy5	266	9	propagation	propagation	NN
cord-004862-yv76yvy5	266	10	of	of	IN
cord-004862-yv76yvy5	266	11	the	the	DT
cord-004862-yv76yvy5	266	12	Lls	Lls	NNP
cord-004862-yv76yvy5	266	13	is	be	VBZ
cord-004862-yv76yvy5	266	14	apparently	apparently	RB
cord-004862-yv76yvy5	266	15	different	different	JJ
cord-004862-yv76yvy5	266	16	in	in	IN
cord-004862-yv76yvy5	266	17	rats	rat	NNS
cord-004862-yv76yvy5	266	18	,	,	,
cord-004862-yv76yvy5	266	19	e.g.	e.g.	RB
cord-004862-yv76yvy5	266	20	,	,	,
cord-004862-yv76yvy5	266	21	to	to	TO
cord-004862-yv76yvy5	266	22	allow	allow	VB
cord-004862-yv76yvy5	266	23	more	more	RBR
cord-004862-yv76yvy5	266	24	full	full	JJ
cord-004862-yv76yvy5	266	25	length	length	NN
cord-004862-yv76yvy5	266	26	reverse	reverse	NN
cord-004862-yv76yvy5	266	27	transcripts	transcript	NNS
cord-004862-yv76yvy5	266	28	or	or	CC
cord-004862-yv76yvy5	266	29	to	to	TO
cord-004862-yv76yvy5	266	30	select	select	VB
cord-004862-yv76yvy5	266	31	for	for	IN
cord-004862-yv76yvy5	266	32	these	these	DT
cord-004862-yv76yvy5	266	33	in	in	IN
cord-004862-yv76yvy5	266	34	the	the	DT
cord-004862-yv76yvy5	266	35	integration	integration	NN
cord-004862-yv76yvy5	266	36	process	process	NN
cord-004862-yv76yvy5	266	37	.	.	.
cord-004862-yv76yvy5	267	1	Full	full	JJ
cord-004862-yv76yvy5	267	2	length	length	NN
cord-004862-yv76yvy5	267	3	L1	L1	NNP
cord-004862-yv76yvy5	267	4	transcripts	transcript	NNS
cord-004862-yv76yvy5	267	5	have	have	VBP
cord-004862-yv76yvy5	267	6	been	be	VBN
cord-004862-yv76yvy5	267	7	observed	observe	VBN
cord-004862-yv76yvy5	267	8	in	in	IN
cord-004862-yv76yvy5	267	9	teratocarcinoma	teratocarcinoma	NNP
cord-004862-yv76yvy5	267	10	cells	cell	NNS
cord-004862-yv76yvy5	267	11	(	(	-LRB-
cord-004862-yv76yvy5	267	12	Skowronski	Skowronski	NNP
cord-004862-yv76yvy5	267	13	and	and	CC
cord-004862-yv76yvy5	267	14	Singer	Singer	NNP
cord-004862-yv76yvy5	267	15	1985	1985	CD
cord-004862-yv76yvy5	267	16	)	)	-RRB-
cord-004862-yv76yvy5	267	17	.	.	.
cord-004862-yv76yvy5	268	1	Given	give	VBN
cord-004862-yv76yvy5	268	2	the	the	DT
cord-004862-yv76yvy5	268	3	assignments	assignment	NNS
cord-004862-yv76yvy5	268	4	of	of	IN
cord-004862-yv76yvy5	268	5	start	start	NN
cord-004862-yv76yvy5	268	6	and	and	CC
cord-004862-yv76yvy5	268	7	stop	stop	VB
cord-004862-yv76yvy5	268	8	codons	codon	NNS
cord-004862-yv76yvy5	268	9	proposed	propose	VBN
cord-004862-yv76yvy5	268	10	in	in	IN
cord-004862-yv76yvy5	268	11	this	this	DT
cord-004862-yv76yvy5	268	12	paper	paper	NN
cord-004862-yv76yvy5	268	13	,	,	,
cord-004862-yv76yvy5	268	14	then	then	RB
cord-004862-yv76yvy5	268	15	transcripts	transcript	NNS
cord-004862-yv76yvy5	268	16	of	of	IN
cord-004862-yv76yvy5	268	17	the	the	DT
cord-004862-yv76yvy5	268	18	L1	L1	NNP
cord-004862-yv76yvy5	268	19	repeat	repeat	NN
cord-004862-yv76yvy5	268	20	of	of	IN
cord-004862-yv76yvy5	268	21	rabbits	rabbit	NNS
cord-004862-yv76yvy5	268	22	and	and	CC
cord-004862-yv76yvy5	268	23	humans	human	NNS
cord-004862-yv76yvy5	268	24	have	have	VBP
cord-004862-yv76yvy5	268	25	the	the	DT
cord-004862-yv76yvy5	268	26	characteristics	characteristic	NNS
cord-004862-yv76yvy5	268	27	of	of	IN
cord-004862-yv76yvy5	268	28	a	a	DT
cord-004862-yv76yvy5	268	29	dicistronic	dicistronic	JJ
cord-004862-yv76yvy5	268	30	RNA	RNA	NNP
cord-004862-yv76yvy5	268	31	.	.	.
cord-004862-yv76yvy5	269	1	Polycistronic	Polycistronic	NNP
cord-004862-yv76yvy5	269	2	mRNAs	mRNAs	NNPS
cord-004862-yv76yvy5	269	3	are	be	VBP
cord-004862-yv76yvy5	269	4	common	common	JJ
cord-004862-yv76yvy5	269	5	in	in	IN
cord-004862-yv76yvy5	269	6	bacteria	bacteria	NNS
cord-004862-yv76yvy5	269	7	,	,	,
cord-004862-yv76yvy5	269	8	and	and	CC
cord-004862-yv76yvy5	269	9	a	a	DT
cord-004862-yv76yvy5	269	10	polycistronic	polycistronic	JJ
cord-004862-yv76yvy5	269	11	arrangement	arrangement	NN
cord-004862-yv76yvy5	269	12	of	of	IN
cord-004862-yv76yvy5	269	13	genes	gene	NNS
cord-004862-yv76yvy5	269	14	is	be	VBZ
cord-004862-yv76yvy5	269	15	found	find	VBN
cord-004862-yv76yvy5	269	16	in	in	IN
cord-004862-yv76yvy5	269	17	the	the	DT
cord-004862-yv76yvy5	269	18	genomes	genome	NNS
cord-004862-yv76yvy5	269	19	of	of	IN
cord-004862-yv76yvy5	269	20	some	some	DT
cord-004862-yv76yvy5	269	21	RNA	RNA	NNP
cord-004862-yv76yvy5	269	22	viruses	virus	NNS
cord-004862-yv76yvy5	269	23	that	that	WDT
cord-004862-yv76yvy5	269	24	infect	infect	VBP
cord-004862-yv76yvy5	269	25	animals	animal	NNS
cord-004862-yv76yvy5	269	26	and	and	CC
cord-004862-yv76yvy5	269	27	plants	plant	NNS
cord-004862-yv76yvy5	269	28	,	,	,
cord-004862-yv76yvy5	269	29	e.g.	e.g.	RB
cord-004862-yv76yvy5	269	30	,	,	,
cord-004862-yv76yvy5	269	31	togaviruses	togaviruse	NNS
cord-004862-yv76yvy5	269	32	,	,	,
cord-004862-yv76yvy5	269	33	coronaviruses	coronaviruse	NNS
cord-004862-yv76yvy5	269	34	,	,	,
cord-004862-yv76yvy5	269	35	and	and	CC
cord-004862-yv76yvy5	269	36	tobacco	tobacco	NN
cord-004862-yv76yvy5	269	37	mosaic	mosaic	NN
cord-004862-yv76yvy5	269	38	virus	virus	NN
cord-004862-yv76yvy5	269	39	.	.	.
cord-004862-yv76yvy5	270	1	In	in	IN
cord-004862-yv76yvy5	270	2	contrast	contrast	NN
cord-004862-yv76yvy5	270	3	,	,	,
cord-004862-yv76yvy5	270	4	most	most	JJS
cord-004862-yv76yvy5	270	5	mRNAs	mRNAs	NNPS
cord-004862-yv76yvy5	270	6	from	from	IN
cord-004862-yv76yvy5	270	7	eukaryotic	eukaryotic	JJ
cord-004862-yv76yvy5	270	8	cellular	cellular	JJ
cord-004862-yv76yvy5	270	9	genes	gene	NNS
cord-004862-yv76yvy5	270	10	are	be	VBP
cord-004862-yv76yvy5	270	11	monocistronic	monocistronic	JJ
cord-004862-yv76yvy5	270	12	.	.	.
cord-004862-yv76yvy5	271	1	Regardless	regardless	RB
cord-004862-yv76yvy5	271	2	of	of	IN
cord-004862-yv76yvy5	271	3	whether	whether	IN
cord-004862-yv76yvy5	271	4	the	the	DT
cord-004862-yv76yvy5	271	5	ORFs	orf	NNS
cord-004862-yv76yvy5	271	6	are	be	VBP
cord-004862-yv76yvy5	271	7	overlapping	overlap	VBG
cord-004862-yv76yvy5	271	8	,	,	,
cord-004862-yv76yvy5	271	9	as	as	IN
cord-004862-yv76yvy5	271	10	in	in	IN
cord-004862-yv76yvy5	271	11	L1Md	L1Md	NNP
cord-004862-yv76yvy5	271	12	,	,	,
cord-004862-yv76yvy5	271	13	or	or	CC
cord-004862-yv76yvy5	271	14	are	be	VBP
cord-004862-yv76yvy5	271	15	part	part	NN
cord-004862-yv76yvy5	271	16	of	of	IN
cord-004862-yv76yvy5	271	17	a	a	DT
cord-004862-yv76yvy5	271	18	dicistronic	dicistronic	JJ
cord-004862-yv76yvy5	271	19	RNA	RNA	NNP
cord-004862-yv76yvy5	271	20	,	,	,
cord-004862-yv76yvy5	271	21	as	as	IN
cord-004862-yv76yvy5	271	22	in	in	IN
cord-004862-yv76yvy5	271	23	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	271	24	and	and	CC
cord-004862-yv76yvy5	271	25	L1Hs	L1Hs	NNP
cord-004862-yv76yvy5	271	26	,	,	,
cord-004862-yv76yvy5	271	27	the	the	DT
cord-004862-yv76yvy5	271	28	structure	structure	NN
cord-004862-yv76yvy5	271	29	of	of	IN
cord-004862-yv76yvy5	271	30	the	the	DT
cord-004862-yv76yvy5	271	31	L	L	NNP
cord-004862-yv76yvy5	271	32	1	1	CD
cord-004862-yv76yvy5	271	33	repeats	repeat	VBZ
cord-004862-yv76yvy5	271	34	resembles	resemble	VBZ
cord-004862-yv76yvy5	271	35	DNA	dna	NN
cord-004862-yv76yvy5	271	36	copies	copy	NNS
cord-004862-yv76yvy5	271	37	of	of	IN
cord-004862-yv76yvy5	271	38	viral	viral	JJ
cord-004862-yv76yvy5	271	39	genomes	genome	NNS
cord-004862-yv76yvy5	271	40	more	more	JJR
cord-004862-yv76yvy5	271	41	than	than	IN
cord-004862-yv76yvy5	271	42	conventional	conventional	JJ
cord-004862-yv76yvy5	271	43	cellular	cellular	JJ
cord-004862-yv76yvy5	271	44	transcription	transcription	NN
cord-004862-yv76yvy5	271	45	units	unit	NNS
cord-004862-yv76yvy5	271	46	.	.	.
cord-004862-yv76yvy5	272	1	This	this	DT
cord-004862-yv76yvy5	272	2	suggests	suggest	VBZ
cord-004862-yv76yvy5	272	3	that	that	IN
cord-004862-yv76yvy5	272	4	the	the	DT
cord-004862-yv76yvy5	272	5	ancestor	ancestor	NN
cord-004862-yv76yvy5	272	6	to	to	IN
cord-004862-yv76yvy5	272	7	L1	L1	NNP
cord-004862-yv76yvy5	272	8	repeats	repeat	VBZ
cord-004862-yv76yvy5	272	9	in	in	IN
cord-004862-yv76yvy5	272	10	fact	fact	NN
cord-004862-yv76yvy5	272	11	may	may	MD
cord-004862-yv76yvy5	272	12	be	be	VB
cord-004862-yv76yvy5	272	13	some	some	DT
cord-004862-yv76yvy5	272	14	type	type	NN
cord-004862-yv76yvy5	272	15	of	of	IN
cord-004862-yv76yvy5	272	16	animal	animal	NN
cord-004862-yv76yvy5	272	17	virus	virus	NN
cord-004862-yv76yvy5	272	18	rather	rather	RB
cord-004862-yv76yvy5	272	19	than	than	IN
cord-004862-yv76yvy5	272	20	a	a	DT
cord-004862-yv76yvy5	272	21	normal	normal	JJ
cord-004862-yv76yvy5	272	22	cellular	cellular	JJ
cord-004862-yv76yvy5	272	23	gene	gene	NN
cord-004862-yv76yvy5	272	24	,	,	,
cord-004862-yv76yvy5	272	25	as	as	IN
cord-004862-yv76yvy5	272	26	is	be	VBZ
cord-004862-yv76yvy5	272	27	often	often	RB
cord-004862-yv76yvy5	272	28	proposed	propose	VBN
cord-004862-yv76yvy5	272	29	(	(	-LRB-
cord-004862-yv76yvy5	272	30	reviewed	review	VBN
cord-004862-yv76yvy5	272	31	in	in	IN
cord-004862-yv76yvy5	272	32	Weiner	Weiner	NNP
cord-004862-yv76yvy5	272	33	et	et	NNP
cord-004862-yv76yvy5	272	34	al	al	NNP
cord-004862-yv76yvy5	272	35	.	.	NNP
cord-004862-yv76yvy5	272	36	1986	1986	CD
cord-004862-yv76yvy5	272	37	)	)	-RRB-
cord-004862-yv76yvy5	272	38	.	.	.
cord-004862-yv76yvy5	273	1	A	a	DT
cord-004862-yv76yvy5	273	2	viral	viral	JJ
cord-004862-yv76yvy5	273	3	ancestor	ancestor	NN
cord-004862-yv76yvy5	273	4	with	with	IN
cord-004862-yv76yvy5	273	5	a	a	DT
cord-004862-yv76yvy5	273	6	wide	wide	JJ
cord-004862-yv76yvy5	273	7	host	host	NN
cord-004862-yv76yvy5	273	8	range	range	NN
cord-004862-yv76yvy5	273	9	would	would	MD
cord-004862-yv76yvy5	273	10	provide	provide	VB
cord-004862-yv76yvy5	273	11	an	an	DT
cord-004862-yv76yvy5	273	12	explanation	explanation	NN
cord-004862-yv76yvy5	273	13	for	for	IN
cord-004862-yv76yvy5	273	14	the	the	DT
cord-004862-yv76yvy5	273	15	independent	independent	JJ
cord-004862-yv76yvy5	273	16	,	,	,
cord-004862-yv76yvy5	273	17	and	and	CC
cord-004862-yv76yvy5	273	18	perhaps	perhaps	RB
cord-004862-yv76yvy5	273	19	simultaneous	simultaneous	JJ
cord-004862-yv76yvy5	273	20	,	,	,
cord-004862-yv76yvy5	273	21	entry	entry	NN
cord-004862-yv76yvy5	273	22	of	of	IN
cord-004862-yv76yvy5	273	23	the	the	DT
cord-004862-yv76yvy5	273	24	L1	L1	NNP
cord-004862-yv76yvy5	273	25	element	element	NN
cord-004862-yv76yvy5	273	26	into	into	IN
cord-004862-yv76yvy5	273	27	different	different	JJ
cord-004862-yv76yvy5	273	28	mammalian	mammalian	JJ
cord-004862-yv76yvy5	273	29	genomes	genome	NNS
cord-004862-yv76yvy5	273	30	.	.	.
cord-004862-yv76yvy5	274	1	The	the	DT
cord-004862-yv76yvy5	274	2	ORFs	orf	NNS
cord-004862-yv76yvy5	274	3	in	in	IN
cord-004862-yv76yvy5	274	4	the	the	DT
cord-004862-yv76yvy5	274	5	L1	L1	NNP
cord-004862-yv76yvy5	274	6	repeal	repeal	NN
cord-004862-yv76yvy5	274	7	appear	appear	VBP
cord-004862-yv76yvy5	274	8	to	to	TO
cord-004862-yv76yvy5	274	9	encode	encode	VB
cord-004862-yv76yvy5	274	10	hybrids	hybrid	NNS
cord-004862-yv76yvy5	274	11	of	of	IN
cord-004862-yv76yvy5	274	12	different	different	JJ
cord-004862-yv76yvy5	274	13	types	type	NNS
cord-004862-yv76yvy5	274	14	of	of	IN
cord-004862-yv76yvy5	274	15	proteins	protein	NNS
cord-004862-yv76yvy5	274	16	(	(	-LRB-
cord-004862-yv76yvy5	274	17	Fig	Fig	NNP
cord-004862-yv76yvy5	274	18	.	.	.
cord-004862-yv76yvy5	274	19	11	11	CD
cord-004862-yv76yvy5	274	20	)	)	-RRB-
cord-004862-yv76yvy5	274	21	.	.	.
cord-004862-yv76yvy5	275	1	OR.F-1	OR.F-1	NNP
cord-004862-yv76yvy5	275	2	can	can	MD
cord-004862-yv76yvy5	275	3	be	be	VB
cord-004862-yv76yvy5	275	4	divided	divide	VBN
cord-004862-yv76yvy5	275	5	into	into	IN
cord-004862-yv76yvy5	275	6	two	two	CD
cord-004862-yv76yvy5	275	7	parts	part	NNS
cord-004862-yv76yvy5	275	8	,	,	,
cord-004862-yv76yvy5	275	9	the	the	DT
cord-004862-yv76yvy5	275	10	N	n	CD
cord-004862-yv76yvy5	275	11	-	-	HYPH
cord-004862-yv76yvy5	275	12	terminal	terminal	NN
cord-004862-yv76yvy5	275	13	por	por	NN
cord-004862-yv76yvy5	275	14	-	-	HYPH
cord-004862-yv76yvy5	275	15	tion	tion	NN
cord-004862-yv76yvy5	275	16	that	that	WDT
cord-004862-yv76yvy5	275	17	is	be	VBZ
cord-004862-yv76yvy5	275	18	not	not	RB
cord-004862-yv76yvy5	275	19	well	well	RB
cord-004862-yv76yvy5	275	20	conserved	conserve	VBN
cord-004862-yv76yvy5	275	21	between	between	IN
cord-004862-yv76yvy5	275	22	species	specie	NNS
cord-004862-yv76yvy5	275	23	and	and	CC
cord-004862-yv76yvy5	275	24	the	the	DT
cord-004862-yv76yvy5	275	25	C	C	NNP
cord-004862-yv76yvy5	275	26	-	-	HYPH
cord-004862-yv76yvy5	275	27	terminal	terminal	NN
cord-004862-yv76yvy5	275	28	portion	portion	NN
cord-004862-yv76yvy5	275	29	that	that	WDT
cord-004862-yv76yvy5	275	30	is	be	VBZ
cord-004862-yv76yvy5	275	31	well	well	RB
cord-004862-yv76yvy5	275	32	conserved	conserved	JJ
cord-004862-yv76yvy5	275	33	.	.	.
cord-004862-yv76yvy5	276	1	In	in	IN
cord-004862-yv76yvy5	276	2	the	the	DT
cord-004862-yv76yvy5	276	3	rabbit	rabbit	NN
cord-004862-yv76yvy5	276	4	L	l	NN
cord-004862-yv76yvy5	276	5	1	1	CD
cord-004862-yv76yvy5	276	6	repeat	repeat	NN
cord-004862-yv76yvy5	276	7	,	,	,
cord-004862-yv76yvy5	276	8	a	a	DT
cord-004862-yv76yvy5	276	9	sequence	sequence	NN
cord-004862-yv76yvy5	276	10	similar	similar	JJ
cord-004862-yv76yvy5	276	11	to	to	IN
cord-004862-yv76yvy5	276	12	keratin	keratin	NN
cord-004862-yv76yvy5	276	13	has	have	VBZ
cord-004862-yv76yvy5	276	14	been	be	VBN
cord-004862-yv76yvy5	276	15	fused	fuse	VBN
cord-004862-yv76yvy5	276	16	to	to	IN
cord-004862-yv76yvy5	276	17	the	the	DT
cord-004862-yv76yvy5	276	18	conserved	conserve	VBN
cord-004862-yv76yvy5	276	19	C	c	NN
cord-004862-yv76yvy5	276	20	-	-	HYPH
cord-004862-yv76yvy5	276	21	terminal	terminal	NN
cord-004862-yv76yvy5	276	22	portion	portion	NN
cord-004862-yv76yvy5	276	23	of	of	IN
cord-004862-yv76yvy5	276	24	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	276	25	.	.	.
cord-004862-yv76yvy5	277	1	Although	although	IN
cord-004862-yv76yvy5	277	2	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	277	3	is	be	VBZ
cord-004862-yv76yvy5	277	4	conserved	conserve	VBN
cord-004862-yv76yvy5	277	5	in	in	IN
cord-004862-yv76yvy5	277	6	L	L	NNP
cord-004862-yv76yvy5	277	7	1	1	CD
cord-004862-yv76yvy5	277	8	s	s	NN
cord-004862-yv76yvy5	277	9	from	from	IN
cord-004862-yv76yvy5	277	10	different	different	JJ
cord-004862-yv76yvy5	277	11	orders	order	NNS
cord-004862-yv76yvy5	277	12	of	of	IN
cord-004862-yv76yvy5	277	13	mammals	mammal	NNS
cord-004862-yv76yvy5	277	14	it	-PRON-	PRP
cord-004862-yv76yvy5	277	15	also	also	RB
cord-004862-yv76yvy5	277	16	seems	seem	VBZ
cord-004862-yv76yvy5	277	17	to	to	TO
cord-004862-yv76yvy5	277	18	be	be	VB
cord-004862-yv76yvy5	277	19	a	a	DT
cord-004862-yv76yvy5	277	20	hybrid	hybrid	NN
cord-004862-yv76yvy5	277	21	of	of	IN
cord-004862-yv76yvy5	277	22	sequences	sequence	NNS
cord-004862-yv76yvy5	277	23	related	relate	VBN
cord-004862-yv76yvy5	277	24	to	to	IN
cord-004862-yv76yvy5	277	25	several	several	JJ
cord-004862-yv76yvy5	277	26	proteins	protein	NNS
cord-004862-yv76yvy5	277	27	(	(	-LRB-
cord-004862-yv76yvy5	277	28	Fig	fig	NN
cord-004862-yv76yvy5	277	29	.	.	.
cord-004862-yv76yvy5	277	30	 	 	_SP
cord-004862-yv76yvy5	278	1	I	-PRON-	PRP
cord-004862-yv76yvy5	278	2	1	1	CD
cord-004862-yv76yvy5	278	3	)	)	-RRB-
cord-004862-yv76yvy5	278	4	.	.	.
cord-004862-yv76yvy5	279	1	The	the	DT
cord-004862-yv76yvy5	279	2	middle	middle	JJ
cord-004862-yv76yvy5	279	3	portion	portion	NN
cord-004862-yv76yvy5	279	4	of	of	IN
cord-004862-yv76yvy5	279	5	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	279	6	is	be	VBZ
cord-004862-yv76yvy5	279	7	related	relate	VBN
cord-004862-yv76yvy5	279	8	to	to	TO
cord-004862-yv76yvy5	279	9	reverse	reverse	VB
cord-004862-yv76yvy5	279	10	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	279	11	(	(	-LRB-
cord-004862-yv76yvy5	279	12	Hattori	Hattori	NNP
cord-004862-yv76yvy5	279	13	et	et	NNP
cord-004862-yv76yvy5	279	14	al	al	NNP
cord-004862-yv76yvy5	279	15	.	.	NNP
cord-004862-yv76yvy5	279	16	1986	1986	CD
cord-004862-yv76yvy5	279	17	;	;	:
cord-004862-yv76yvy5	279	18	Loeb	Loeb	NNP
cord-004862-yv76yvy5	279	19	et	et	NNP
cord-004862-yv76yvy5	279	20	al	al	NNP
cord-004862-yv76yvy5	279	21	.	.	NNP
cord-004862-yv76yvy5	279	22	1986	1986	CD
cord-004862-yv76yvy5	279	23	)	)	-RRB-
cord-004862-yv76yvy5	279	24	.	.	.
cord-004862-yv76yvy5	280	1	Different	different	JJ
cord-004862-yv76yvy5	280	2	parts	part	NNS
cord-004862-yv76yvy5	280	3	of	of	IN
cord-004862-yv76yvy5	280	4	the	the	DT
cord-004862-yv76yvy5	280	5	C	C	NNP
cord-004862-yv76yvy5	280	6	-	-	HYPH
cord-004862-yv76yvy5	280	7	terminal	terminal	NN
cord-004862-yv76yvy5	280	8	region	region	NN
cord-004862-yv76yvy5	280	9	are	be	VBP
cord-004862-yv76yvy5	280	10	related	relate	VBN
cord-004862-yv76yvy5	280	11	to	to	IN
cord-004862-yv76yvy5	280	12	transferrin	transferrin	NN
cord-004862-yv76yvy5	280	13	(	(	-LRB-
cord-004862-yv76yvy5	280	14	Hattori	Hattori	NNP
cord-004862-yv76yvy5	280	15	et	et	NNP
cord-004862-yv76yvy5	280	16	al	al	NNP
cord-004862-yv76yvy5	280	17	.	.	NNP
cord-004862-yv76yvy5	280	18	1986	1986	CD
cord-004862-yv76yvy5	280	19	)	)	-RRB-
cord-004862-yv76yvy5	280	20	and	and	CC
cord-004862-yv76yvy5	280	21	to	to	IN
cord-004862-yv76yvy5	280	22	nucleic	nucleic	JJ
cord-004862-yv76yvy5	280	23	acid	acid	NN
cord-004862-yv76yvy5	280	24	binding	bind	VBG
cord-004862-yv76yvy5	280	25	proteins	protein	NNS
cord-004862-yv76yvy5	280	26	with	with	IN
cord-004862-yv76yvy5	280	27	the	the	DT
cord-004862-yv76yvy5	280	28	cysteine	cysteine	NN
cord-004862-yv76yvy5	280	29	structural	structural	JJ
cord-004862-yv76yvy5	280	30	motif	motif	NN
cord-004862-yv76yvy5	280	31	,	,	,
cord-004862-yv76yvy5	280	32	such	such	JJ
cord-004862-yv76yvy5	280	33	as	as	IN
cord-004862-yv76yvy5	280	34	the	the	DT
cord-004862-yv76yvy5	280	35	binding	bind	VBG
cord-004862-yv76yvy5	280	36	proteins	protein	NNS
cord-004862-yv76yvy5	280	37	derived	derive	VBN
cord-004862-yv76yvy5	280	38	from	from	IN
cord-004862-yv76yvy5	280	39	retroviral	retroviral	JJ
cord-004862-yv76yvy5	280	40	gaggenes	gaggene	NNS
cord-004862-yv76yvy5	280	41	(	(	-LRB-
cord-004862-yv76yvy5	280	42	Fanning	Fanning	NNP
cord-004862-yv76yvy5	280	43	and	and	CC
cord-004862-yv76yvy5	280	44	Singer	Singer	NNP
cord-004862-yv76yvy5	280	45	I987	i987	CD
cord-004862-yv76yvy5	280	46	)	)	-RRB-
cord-004862-yv76yvy5	280	47	.	.	.
cord-004862-yv76yvy5	281	1	The	the	DT
cord-004862-yv76yvy5	281	2	cysteine	cysteine	NN
cord-004862-yv76yvy5	281	3	structural	structural	JJ
cord-004862-yv76yvy5	281	4	motif	motif	NN
cord-004862-yv76yvy5	281	5	is	be	VBZ
cord-004862-yv76yvy5	281	6	related	relate	VBN
cord-004862-yv76yvy5	281	7	to	to	IN
cord-004862-yv76yvy5	281	8	the	the	DT
cord-004862-yv76yvy5	281	9	zinc	zinc	NN
cord-004862-yv76yvy5	281	10	fingers	finger	NNS
cord-004862-yv76yvy5	281	11	characterized	characterize	VBN
cord-004862-yv76yvy5	281	12	in	in	IN
cord-004862-yv76yvy5	281	13	TFIIIA	TFIIIA	NNP
cord-004862-yv76yvy5	281	14	and	and	CC
cord-004862-yv76yvy5	281	15	other	other	JJ
cord-004862-yv76yvy5	281	16	nucleic	nucleic	JJ
cord-004862-yv76yvy5	281	17	acid	acid	NN
cord-004862-yv76yvy5	281	18	binding	bind	VBG
cord-004862-yv76yvy5	281	19	proteins	protein	NNS
cord-004862-yv76yvy5	281	20	(	(	-LRB-
cord-004862-yv76yvy5	281	21	Fanning	Fanning	NNP
cord-004862-yv76yvy5	281	22	and	and	CC
cord-004862-yv76yvy5	281	23	Singer	Singer	NNP
cord-004862-yv76yvy5	281	24	1987	1987	CD
cord-004862-yv76yvy5	281	25	)	)	-RRB-
cord-004862-yv76yvy5	281	26	.	.	.
cord-004862-yv76yvy5	282	1	This	this	DT
cord-004862-yv76yvy5	282	2	pastiche	pastiche	NN
cord-004862-yv76yvy5	282	3	of	of	IN
cord-004862-yv76yvy5	282	4	similarities	similarity	NNS
cord-004862-yv76yvy5	282	5	suggests	suggest	VBZ
cord-004862-yv76yvy5	282	6	that	that	IN
cord-004862-yv76yvy5	282	7	the	the	DT
cord-004862-yv76yvy5	282	8	L1	L1	NNP
cord-004862-yv76yvy5	282	9	element	element	NN
cord-004862-yv76yvy5	282	10	is	be	VBZ
cord-004862-yv76yvy5	282	11	a	a	DT
cord-004862-yv76yvy5	282	12	fusion	fusion	NN
cord-004862-yv76yvy5	282	13	of	of	IN
cord-004862-yv76yvy5	282	14	several	several	JJ
cord-004862-yv76yvy5	282	15	different	different	JJ
cord-004862-yv76yvy5	282	16	sequences	sequence	NNS
cord-004862-yv76yvy5	282	17	,	,	,
cord-004862-yv76yvy5	282	18	Some	some	DT
cord-004862-yv76yvy5	282	19	of	of	IN
cord-004862-yv76yvy5	282	20	which	which	WDT
cord-004862-yv76yvy5	282	21	are	be	VBP
cord-004862-yv76yvy5	282	22	derived	derive	VBN
cord-004862-yv76yvy5	282	23	from	from	IN
cord-004862-yv76yvy5	282	24	cellular	cellular	JJ
cord-004862-yv76yvy5	282	25	genes	gene	NNS
cord-004862-yv76yvy5	282	26	,	,	,
cord-004862-yv76yvy5	282	27	possibly	possibly	RB
cord-004862-yv76yvy5	282	28	by	by	IN
cord-004862-yv76yvy5	282	29	a	a	DT
cord-004862-yv76yvy5	282	30	viral	viral	JJ
cord-004862-yv76yvy5	282	31	vector	vector	NN
cord-004862-yv76yvy5	282	32	.	.	.
cord-004862-yv76yvy5	283	1	Another	another	DT
cord-004862-yv76yvy5	283	2	fusion	fusion	NN
cord-004862-yv76yvy5	283	3	event	event	NN
cord-004862-yv76yvy5	283	4	may	may	MD
cord-004862-yv76yvy5	283	5	account	account	VB
cord-004862-yv76yvy5	283	6	for	for	IN
cord-004862-yv76yvy5	283	7	the	the	DT
cord-004862-yv76yvy5	283	8	variation	variation	NN
cord-004862-yv76yvy5	283	9	in	in	IN
cord-004862-yv76yvy5	283	10	sizes	size	NNS
cord-004862-yv76yvy5	283	11	and	and	CC
cord-004862-yv76yvy5	283	12	sequences	sequence	NNS
cord-004862-yv76yvy5	283	13	of	of	IN
cord-004862-yv76yvy5	283	14	the	the	DT
cord-004862-yv76yvy5	283	15	3	3	CD
cord-004862-yv76yvy5	283	16	'	'	POS
cord-004862-yv76yvy5	283	17	untranslated	untranslated	JJ
cord-004862-yv76yvy5	283	18	regions	region	NNS
cord-004862-yv76yvy5	283	19	of	of	IN
cord-004862-yv76yvy5	283	20	L1	L1	NNP
cord-004862-yv76yvy5	283	21	repeats	repeat	VBZ
cord-004862-yv76yvy5	283	22	in	in	IN
cord-004862-yv76yvy5	283	23	different	different	JJ
cord-004862-yv76yvy5	283	24	mammals	mammal	NNS
cord-004862-yv76yvy5	283	25	.	.	.
cord-004862-yv76yvy5	284	1	The	the	DT
cord-004862-yv76yvy5	284	2	3	3	CD
cord-004862-yv76yvy5	284	3	'	'	POS
cord-004862-yv76yvy5	284	4	untranslated	untranslated	JJ
cord-004862-yv76yvy5	284	5	regions	region	NNS
cord-004862-yv76yvy5	284	6	of	of	IN
cord-004862-yv76yvy5	284	7	orthologous	orthologous	JJ
cord-004862-yv76yvy5	284	8	globin	globin	NN
cord-004862-yv76yvy5	284	9	genes	gene	NNS
cord-004862-yv76yvy5	284	10	in	in	IN
cord-004862-yv76yvy5	284	11	mammals	mammal	NNS
cord-004862-yv76yvy5	284	12	have	have	VBP
cord-004862-yv76yvy5	284	13	retained	retain	VBN
cord-004862-yv76yvy5	284	14	obvious	obvious	JJ
cord-004862-yv76yvy5	284	15	sequence	sequence	NN
cord-004862-yv76yvy5	284	16	similarities	similarity	NNS
cord-004862-yv76yvy5	284	17	over	over	IN
cord-004862-yv76yvy5	284	18	the	the	DT
cord-004862-yv76yvy5	284	19	course	course	NN
cord-004862-yv76yvy5	284	20	of	of	IN
cord-004862-yv76yvy5	284	21	eutherian	eutherian	JJ
cord-004862-yv76yvy5	284	22	evolution	evolution	NN
cord-004862-yv76yvy5	284	23	(	(	-LRB-
cord-004862-yv76yvy5	284	24	e.g.	e.g.	RB
cord-004862-yv76yvy5	284	25	,	,	,
cord-004862-yv76yvy5	284	26	Hardies	Hardies	NNP
cord-004862-yv76yvy5	284	27	et	et	FW
cord-004862-yv76yvy5	284	28	al	al	NNP
cord-004862-yv76yvy5	284	29	.	.	.
cord-004862-yv76yvy5	284	30	1984	1984	CD
cord-004862-yv76yvy5	284	31	;	;	:
cord-004862-yv76yvy5	284	32	Hardison	Hardison	NNP
cord-004862-yv76yvy5	284	33	1984	1984	CD
cord-004862-yv76yvy5	284	34	)	)	-RRB-
cord-004862-yv76yvy5	284	35	,	,	,
cord-004862-yv76yvy5	284	36	so	so	CC
cord-004862-yv76yvy5	284	37	it	-PRON-	PRP
cord-004862-yv76yvy5	284	38	is	be	VBZ
cord-004862-yv76yvy5	284	39	puzzling	puzzle	VBG
cord-004862-yv76yvy5	284	40	that	that	IN
cord-004862-yv76yvy5	284	41	no	no	DT
cord-004862-yv76yvy5	284	42	sequence	sequence	NN
cord-004862-yv76yvy5	284	43	similarity	similarity	NN
cord-004862-yv76yvy5	284	44	is	be	VBZ
cord-004862-yv76yvy5	284	45	seen	see	VBN
cord-004862-yv76yvy5	284	46	in	in	IN
cord-004862-yv76yvy5	284	47	the	the	DT
cord-004862-yv76yvy5	284	48	3	3	CD
cord-004862-yv76yvy5	284	49	'	'	POS
cord-004862-yv76yvy5	284	50	untranslated	untranslated	JJ
cord-004862-yv76yvy5	284	51	region	region	NN
cord-004862-yv76yvy5	284	52	of	of	IN
cord-004862-yv76yvy5	284	53	L1	L1	NNP
cord-004862-yv76yvy5	284	54	repeats	repeat	VBZ
cord-004862-yv76yvy5	284	55	in	in	IN
cord-004862-yv76yvy5	284	56	comparisons	comparison	NNS
cord-004862-yv76yvy5	284	57	between	between	IN
cord-004862-yv76yvy5	284	58	mammals	mammal	NNS
cord-004862-yv76yvy5	284	59	(	(	-LRB-
cord-004862-yv76yvy5	284	60	Fig	fig	NN
cord-004862-yv76yvy5	284	61	.	.	.
cord-004862-yv76yvy5	284	62	11	11	CD
cord-004862-yv76yvy5	284	63	)	)	-RRB-
cord-004862-yv76yvy5	284	64	.	.	.
cord-004862-yv76yvy5	285	1	Perhaps	perhaps	RB
cord-004862-yv76yvy5	285	2	the	the	DT
cord-004862-yv76yvy5	285	3	conserved	conserved	JJ
cord-004862-yv76yvy5	285	4	coding	coding	NN
cord-004862-yv76yvy5	285	5	region	region	NN
cord-004862-yv76yvy5	285	6	was	be	VBD
cord-004862-yv76yvy5	285	7	fused	fuse	VBN
cord-004862-yv76yvy5	285	8	tO	to	IN
cord-004862-yv76yvy5	285	9	a	a	DT
cord-004862-yv76yvy5	285	10	different	different	JJ
cord-004862-yv76yvy5	285	11	3	3	CD
cord-004862-yv76yvy5	285	12	'	'	POS
cord-004862-yv76yvy5	285	13	untranslated	untranslated	JJ
cord-004862-yv76yvy5	285	14	sequence	sequence	NN
cord-004862-yv76yvy5	285	15	in	in	IN
cord-004862-yv76yvy5	285	16	each	each	DT
cord-004862-yv76yvy5	285	17	species	specie	NNS
cord-004862-yv76yvy5	285	18	.	.	.
cord-004862-yv76yvy5	286	1	It	-PRON-	PRP
cord-004862-yv76yvy5	286	2	is	be	VBZ
cord-004862-yv76yvy5	286	3	noteworthy	noteworthy	JJ
cord-004862-yv76yvy5	286	4	that	that	IN
cord-004862-yv76yvy5	286	5	the	the	DT
cord-004862-yv76yvy5	286	6	5	5	CD
cord-004862-yv76yvy5	286	7	'	'	NN
cord-004862-yv76yvy5	286	8	end	end	NN
cord-004862-yv76yvy5	286	9	of	of	IN
cord-004862-yv76yvy5	286	10	L1Ocl	l1ocl	NN
cord-004862-yv76yvy5	286	11	begins	begin	VBZ
cord-004862-yv76yvy5	286	12	immediately	immediately	RB
cord-004862-yv76yvy5	286	13	after	after	IN
cord-004862-yv76yvy5	286	14	the	the	DT
cord-004862-yv76yvy5	286	15	conserved	conserve	VBN
cord-004862-yv76yvy5	286	16	termination	termination	NN
cord-004862-yv76yvy5	286	17	codon	codon	NN
cord-004862-yv76yvy5	286	18	that	that	WDT
cord-004862-yv76yvy5	286	19	ends	end	VBZ
cord-004862-yv76yvy5	286	20	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	286	21	,	,	,
cord-004862-yv76yvy5	286	22	suggesting	suggest	VBG
cord-004862-yv76yvy5	286	23	that	that	IN
cord-004862-yv76yvy5	286	24	the	the	DT
cord-004862-yv76yvy5	286	25	sequence	sequence	NN
cord-004862-yv76yvy5	286	26	corresponding	correspond	VBG
cord-004862-yv76yvy5	286	27	to	to	IN
cord-004862-yv76yvy5	286	28	the	the	DT
cord-004862-yv76yvy5	286	29	3	3	CD
cord-004862-yv76yvy5	286	30	'	'	POS
cord-004862-yv76yvy5	286	31	untranslated	untranslated	JJ
cord-004862-yv76yvy5	286	32	region	region	NN
cord-004862-yv76yvy5	286	33	of	of	IN
cord-004862-yv76yvy5	286	34	L	L	NNP
cord-004862-yv76yvy5	286	35	1Oc	1oc	CD
cord-004862-yv76yvy5	286	36	may	may	MD
cord-004862-yv76yvy5	286	37	exist	exist	VB
cord-004862-yv76yvy5	286	38	as	as	IN
cord-004862-yv76yvy5	286	39	a	a	DT
cord-004862-yv76yvy5	286	40	distinct	distinct	JJ
cord-004862-yv76yvy5	286	41	repetitive	repetitive	JJ
cord-004862-yv76yvy5	286	42	element	element	NN
cord-004862-yv76yvy5	286	43	in	in	IN
cord-004862-yv76yvy5	286	44	the	the	DT
cord-004862-yv76yvy5	286	45	rabbit	rabbit	NN
cord-004862-yv76yvy5	286	46	genome	genome	NN
cord-004862-yv76yvy5	286	47	in	in	IN
cord-004862-yv76yvy5	286	48	addition	addition	NN
cord-004862-yv76yvy5	286	49	to	to	IN
cord-004862-yv76yvy5	286	50	its	-PRON-	PRP$
cord-004862-yv76yvy5	286	51	presence	presence	NN
cord-004862-yv76yvy5	286	52	in	in	IN
cord-004862-yv76yvy5	286	53	the	the	DT
cord-004862-yv76yvy5	286	54	L1	L1	NNP
cord-004862-yv76yvy5	286	55	sequence	sequence	NN
cord-004862-yv76yvy5	286	56	.	.	.
cord-004862-yv76yvy5	287	1	If	if	IN
cord-004862-yv76yvy5	287	2	so	so	RB
cord-004862-yv76yvy5	287	3	,	,	,
cord-004862-yv76yvy5	287	4	this	this	DT
cord-004862-yv76yvy5	287	5	would	would	MD
cord-004862-yv76yvy5	287	6	be	be	VB
cord-004862-yv76yvy5	287	7	an	an	DT
cord-004862-yv76yvy5	287	8	additional	additional	JJ
cord-004862-yv76yvy5	287	9	factor	factor	NN
cord-004862-yv76yvy5	287	10	in	in	IN
cord-004862-yv76yvy5	287	11	explaining	explain	VBG
cord-004862-yv76yvy5	287	12	the	the	DT
cord-004862-yv76yvy5	287	13	large	large	JJ
cord-004862-yv76yvy5	287	14	increase	increase	NN
cord-004862-yv76yvy5	287	15	in	in	IN
cord-004862-yv76yvy5	287	16	copy	copy	NN
cord-004862-yv76yvy5	287	17	number	number	NN
cord-004862-yv76yvy5	287	18	of	of	IN
cord-004862-yv76yvy5	287	19	Ll	Ll	NNP
cord-004862-yv76yvy5	287	20	repeats	repeat	VBZ
cord-004862-yv76yvy5	287	21	in	in	IN
cord-004862-yv76yvy5	287	22	this	this	DT
cord-004862-yv76yvy5	287	23	region	region	NN
cord-004862-yv76yvy5	287	24	.	.	.
cord-004862-yv76yvy5	288	1	A	a	DT
cord-004862-yv76yvy5	288	2	similar	similar	JJ
cord-004862-yv76yvy5	288	3	situation	situation	NN
cord-004862-yv76yvy5	288	4	has	have	VBZ
cord-004862-yv76yvy5	288	5	been	be	VBN
cord-004862-yv76yvy5	288	6	observed	observe	VBN
cord-004862-yv76yvy5	288	7	in	in	IN
cord-004862-yv76yvy5	288	8	Drosophila	Drosophila	NNP
cord-004862-yv76yvy5	288	9	melanogaster	melanogaster	NN
cord-004862-yv76yvy5	288	10	,	,	,
cord-004862-yv76yvy5	288	11	in	in	IN
cord-004862-yv76yvy5	288	12	which	which	WDT
cord-004862-yv76yvy5	288	13	suffix	suffix	NN
cord-004862-yv76yvy5	288	14	,	,	,
cord-004862-yv76yvy5	288	15	an	an	DT
cord-004862-yv76yvy5	288	16	element	element	NN
cord-004862-yv76yvy5	288	17	repeated	repeat	VBD
cord-004862-yv76yvy5	288	18	about	about	IN
cord-004862-yv76yvy5	288	19	300	300	CD
cord-004862-yv76yvy5	288	20	times	time	NNS
cord-004862-yv76yvy5	288	21	in	in	IN
cord-004862-yv76yvy5	288	22	the	the	DT
cord-004862-yv76yvy5	288	23	genome	genome	NN
cord-004862-yv76yvy5	288	24	,	,	,
cord-004862-yv76yvy5	288	25	is	be	VBZ
cord-004862-yv76yvy5	288	26	almost	almost	RB
cord-004862-yv76yvy5	288	27	identical	identical	JJ
cord-004862-yv76yvy5	288	28	to	to	IN
cord-004862-yv76yvy5	288	29	the	the	DT
cord-004862-yv76yvy5	288	30	sequence	sequence	NN
cord-004862-yv76yvy5	288	31	of	of	IN
cord-004862-yv76yvy5	288	32	the	the	DT
cord-004862-yv76yvy5	288	33	3	3	CD
cord-004862-yv76yvy5	288	34	'	'	POS
cord-004862-yv76yvy5	288	35	untranslated	untranslated	JJ
cord-004862-yv76yvy5	288	36	region	region	NN
cord-004862-yv76yvy5	288	37	(	(	-LRB-
cord-004862-yv76yvy5	288	38	but	but	CC
cord-004862-yv76yvy5	288	39	not	not	RB
cord-004862-yv76yvy5	288	40	the	the	DT
cord-004862-yv76yvy5	288	41	coding	code	VBG
cord-004862-yv76yvy5	288	42	region	region	NN
cord-004862-yv76yvy5	288	43	)	)	-RRB-
cord-004862-yv76yvy5	288	44	of	of	IN
cord-004862-yv76yvy5	288	45	the	the	DT
cord-004862-yv76yvy5	288	46	F	F	NNP
cord-004862-yv76yvy5	288	47	element	element	NN
cord-004862-yv76yvy5	288	48	that	that	WDT
cord-004862-yv76yvy5	288	49	is	be	VBZ
cord-004862-yv76yvy5	288	50	present	present	JJ
cord-004862-yv76yvy5	288	51	about	about	IN
cord-004862-yv76yvy5	288	52	70	70	CD
cord-004862-yv76yvy5	288	53	times	time	NNS
cord-004862-yv76yvy5	288	54	in	in	IN
cord-004862-yv76yvy5	288	55	the	the	DT
cord-004862-yv76yvy5	288	56	genome	genome	NN
cord-004862-yv76yvy5	288	57	(	(	-LRB-
cord-004862-yv76yvy5	288	58	DiNocera	DiNocera	NNP
cord-004862-yv76yvy5	288	59	and	and	CC
cord-004862-yv76yvy5	288	60	Casari	Casari	NNP
cord-004862-yv76yvy5	288	61	1987	1987	CD
cord-004862-yv76yvy5	288	62	)	)	-RRB-
cord-004862-yv76yvy5	288	63	.	.	.
cord-004862-yv76yvy5	289	1	The	the	DT
cord-004862-yv76yvy5	289	2	mammalian	mammalian	JJ
cord-004862-yv76yvy5	289	3	L1	L1	NNP
cord-004862-yv76yvy5	289	4	repeats	repeat	VBZ
cord-004862-yv76yvy5	289	5	show	show	VBP
cord-004862-yv76yvy5	289	6	a	a	DT
cord-004862-yv76yvy5	289	7	clear	clear	JJ
cord-004862-yv76yvy5	289	8	similarity	similarity	NN
cord-004862-yv76yvy5	289	9	to	to	IN
cord-004862-yv76yvy5	289	10	the	the	DT
cord-004862-yv76yvy5	289	11	ingi	ingi	NNP
cord-004862-yv76yvy5	289	12	repeat	repeat	VB
cord-004862-yv76yvy5	289	13	in	in	IN
cord-004862-yv76yvy5	289	14	the	the	DT
cord-004862-yv76yvy5	289	15	protozoan	protozoan	NN
cord-004862-yv76yvy5	289	16	Trypanosoma	Trypanosoma	NNP
cord-004862-yv76yvy5	289	17	brucei	brucei	NNP
cord-004862-yv76yvy5	289	18	(	(	-LRB-
cord-004862-yv76yvy5	289	19	Kimmel	Kimmel	NNP
cord-004862-yv76yvy5	289	20	et	et	NNP
cord-004862-yv76yvy5	289	21	al	al	NNP
cord-004862-yv76yvy5	289	22	.	.	NNP
cord-004862-yv76yvy5	289	23	1987	1987	CD
cord-004862-yv76yvy5	289	24	)	)	-RRB-
cord-004862-yv76yvy5	289	25	,	,	,
cord-004862-yv76yvy5	289	26	the	the	DT
cord-004862-yv76yvy5	289	27	I	-PRON-	PRP
cord-004862-yv76yvy5	289	28	factor	factor	NN
cord-004862-yv76yvy5	289	29	of	of	IN
cord-004862-yv76yvy5	289	30	the	the	DT
cord-004862-yv76yvy5	289	31	I	I	NNP
cord-004862-yv76yvy5	289	32	-	-	HYPH
cord-004862-yv76yvy5	289	33	R	r	NN
cord-004862-yv76yvy5	289	34	system	system	NN
cord-004862-yv76yvy5	289	35	of	of	IN
cord-004862-yv76yvy5	289	36	hybrid	hybrid	JJ
cord-004862-yv76yvy5	289	37	dysgenesis	dysgenesis	NN
cord-004862-yv76yvy5	289	38	in	in	IN
cord-004862-yv76yvy5	289	39	D.	D.	NNP
cord-004862-yv76yvy5	289	40	melanogaster	melanogaster	NN
cord-004862-yv76yvy5	289	41	(	(	-LRB-
cord-004862-yv76yvy5	289	42	Fawcett	Fawcett	NNP
cord-004862-yv76yvy5	289	43	et	et	FW
cord-004862-yv76yvy5	289	44	al	al	NNP
cord-004862-yv76yvy5	289	45	.	.	NNP
cord-004862-yv76yvy5	289	46	1986	1986	CD
cord-004862-yv76yvy5	289	47	)	)	-RRB-
cord-004862-yv76yvy5	289	48	,	,	,
cord-004862-yv76yvy5	289	49	F	F	NNP
cord-004862-yv76yvy5	289	50	elements	element	NNS
cord-004862-yv76yvy5	289	51	in	in	IN
cord-004862-yv76yvy5	289	52	D.	D.	NNP
cord-004862-yv76yvy5	289	53	melanogaster	melanogaster	NNP
cord-004862-yv76yvy5	289	54	(	(	-LRB-
cord-004862-yv76yvy5	289	55	DiNocera	DiNocera	NNP
cord-004862-yv76yvy5	289	56	and	and	CC
cord-004862-yv76yvy5	289	57	Casari	Casari	NNP
cord-004862-yv76yvy5	289	58	1987	1987	CD
cord-004862-yv76yvy5	289	59	)	)	-RRB-
cord-004862-yv76yvy5	289	60	,	,	,
cord-004862-yv76yvy5	289	61	and	and	CC
cord-004862-yv76yvy5	289	62	the	the	DT
cord-004862-yv76yvy5	289	63	R	r	NN
cord-004862-yv76yvy5	289	64	1	1	CD
cord-004862-yv76yvy5	289	65	Bm	Bm	NNP
cord-004862-yv76yvy5	289	66	(	(	-LRB-
cord-004862-yv76yvy5	289	67	Xiong	Xiong	NNP
cord-004862-yv76yvy5	289	68	and	and	CC
cord-004862-yv76yvy5	289	69	Eickbush	Eickbush	NNP
cord-004862-yv76yvy5	289	70	1988	1988	CD
cord-004862-yv76yvy5	289	71	)	)	-RRB-
cord-004862-yv76yvy5	289	72	and	and	CC
cord-004862-yv76yvy5	289	73	R2Bm	R2Bm	NFP
cord-004862-yv76yvy5	289	74	(	(	-LRB-
cord-004862-yv76yvy5	289	75	Burke	Burke	NNP
cord-004862-yv76yvy5	289	76	et	et	NNP
cord-004862-yv76yvy5	289	77	al	al	NNP
cord-004862-yv76yvy5	289	78	.	.	NNP
cord-004862-yv76yvy5	289	79	1987	1987	CD
cord-004862-yv76yvy5	289	80	)	)	-RRB-
cord-004862-yv76yvy5	290	1	insertion	insertion	NN
cord-004862-yv76yvy5	290	2	sequences	sequence	NNS
cord-004862-yv76yvy5	290	3	in	in	IN
cord-004862-yv76yvy5	290	4	some	some	DT
cord-004862-yv76yvy5	290	5	rRNA	rRNA	NNP
cord-004862-yv76yvy5	290	6	genes	gene	NNS
cord-004862-yv76yvy5	290	7	OfBombyx	OfBombyx	NNP
cord-004862-yv76yvy5	290	8	mori	mori	NNP
cord-004862-yv76yvy5	290	9	(	(	-LRB-
cord-004862-yv76yvy5	290	10	Fig	Fig	NNP
cord-004862-yv76yvy5	290	11	.	.	.
cord-004862-yv76yvy5	290	12	11	11	CD
cord-004862-yv76yvy5	290	13	)	)	-RRB-
cord-004862-yv76yvy5	290	14	.	.	.
cord-004862-yv76yvy5	291	1	The	the	DT
cord-004862-yv76yvy5	291	2	similarity	similarity	NN
cord-004862-yv76yvy5	291	3	has	have	VBZ
cord-004862-yv76yvy5	291	4	been	be	VBN
cord-004862-yv76yvy5	291	5	17	17	CD
cord-004862-yv76yvy5	291	6	recognized	recognize	VBN
cord-004862-yv76yvy5	291	7	only	only	RB
cord-004862-yv76yvy5	291	8	in	in	IN
cord-004862-yv76yvy5	291	9	the	the	DT
cord-004862-yv76yvy5	291	10	region	region	NN
cord-004862-yv76yvy5	291	11	proposed	propose	VBD
cord-004862-yv76yvy5	291	12	to	to	TO
cord-004862-yv76yvy5	291	13	encode	encode	VB
cord-004862-yv76yvy5	291	14	reverse	reverse	JJ
cord-004862-yv76yvy5	291	15	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	291	16	,	,	,
cord-004862-yv76yvy5	291	17	and	and	CC
cord-004862-yv76yvy5	291	18	these	these	DT
cord-004862-yv76yvy5	291	19	sequences	sequence	NNS
cord-004862-yv76yvy5	291	20	are	be	VBP
cord-004862-yv76yvy5	291	21	more	more	RBR
cord-004862-yv76yvy5	291	22	similar	similar	JJ
cord-004862-yv76yvy5	291	23	among	among	IN
cord-004862-yv76yvy5	291	24	themselves	-PRON-	PRP
cord-004862-yv76yvy5	291	25	than	than	IN
cord-004862-yv76yvy5	291	26	to	to	TO
cord-004862-yv76yvy5	291	27	retroviral	retroviral	JJ
cord-004862-yv76yvy5	291	28	reverse	reverse	NN
cord-004862-yv76yvy5	291	29	transcriptases	transcriptase	NNS
cord-004862-yv76yvy5	291	30	(	(	-LRB-
cord-004862-yv76yvy5	291	31	DiNocera	DiNocera	NNP
cord-004862-yv76yvy5	291	32	and	and	CC
cord-004862-yv76yvy5	291	33	Casari	Casari	NNP
cord-004862-yv76yvy5	291	34	1987	1987	CD
cord-004862-yv76yvy5	291	35	;	;	:
cord-004862-yv76yvy5	291	36	Xiong	Xiong	NNP
cord-004862-yv76yvy5	291	37	and	and	CC
cord-004862-yv76yvy5	291	38	Eickbush	Eickbush	NNP
cord-004862-yv76yvy5	291	39	1988	1988	CD
cord-004862-yv76yvy5	291	40	)	)	-RRB-
cord-004862-yv76yvy5	291	41	.	.	.
cord-004862-yv76yvy5	292	1	The	the	DT
cord-004862-yv76yvy5	292	2	mammalian	mammalian	JJ
cord-004862-yv76yvy5	292	3	L1	L1	NNP
cord-004862-yv76yvy5	292	4	s	s	NNP
cord-004862-yv76yvy5	292	5	and	and	CC
cord-004862-yv76yvy5	292	6	these	these	DT
cord-004862-yv76yvy5	292	7	protozoan	protozoan	NN
cord-004862-yv76yvy5	292	8	and	and	CC
cord-004862-yv76yvy5	292	9	insect	insect	NN
cord-004862-yv76yvy5	292	10	repeats	repeat	VBZ
cord-004862-yv76yvy5	292	11	share	share	VBP
cord-004862-yv76yvy5	293	1	other	other	JJ
cord-004862-yv76yvy5	293	2	structural	structural	JJ
cord-004862-yv76yvy5	293	3	features	feature	NNS
cord-004862-yv76yvy5	293	4	,	,	,
cord-004862-yv76yvy5	293	5	such	such	JJ
cord-004862-yv76yvy5	293	6	as	as	IN
cord-004862-yv76yvy5	293	7	the	the	DT
cord-004862-yv76yvy5	293	8	absence	absence	NN
cord-004862-yv76yvy5	293	9	of	of	IN
cord-004862-yv76yvy5	293	10	long	long	JJ
cord-004862-yv76yvy5	293	11	terminal	terminal	NN
cord-004862-yv76yvy5	293	12	repeats	repeat	VBZ
cord-004862-yv76yvy5	293	13	,	,	,
cord-004862-yv76yvy5	293	14	the	the	DT
cord-004862-yv76yvy5	293	15	presence	presence	NN
cord-004862-yv76yvy5	293	16	of	of	IN
cord-004862-yv76yvy5	293	17	at	at	RB
cord-004862-yv76yvy5	293	18	least	least	RBS
cord-004862-yv76yvy5	293	19	two	two	CD
cord-004862-yv76yvy5	293	20	ORFs	ORFs	NNP
cord-004862-yv76yvy5	293	21	(	(	-LRB-
cord-004862-yv76yvy5	293	22	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	293	23	containing	contain	VBG
cord-004862-yv76yvy5	293	24	sequences	sequence	NNS
cord-004862-yv76yvy5	293	25	similar	similar	JJ
cord-004862-yv76yvy5	293	26	to	to	TO
cord-004862-yv76yvy5	293	27	reverse	reverse	VB
cord-004862-yv76yvy5	293	28	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	293	29	and	and	CC
cord-004862-yv76yvy5	293	30	either	either	CC
cord-004862-yv76yvy5	293	31	ORF-1	ORF-1	NNP
cord-004862-yv76yvy5	293	32	or	or	CC
cord-004862-yv76yvy5	293	33	ORF-2	ORF-2	NNP
cord-004862-yv76yvy5	293	34	encoding	encode	VBG
cord-004862-yv76yvy5	293	35	a	a	DT
cord-004862-yv76yvy5	293	36	cysteine	cysteine	NN
cord-004862-yv76yvy5	293	37	motif	motif	NN
cord-004862-yv76yvy5	293	38	)	)	-RRB-
cord-004862-yv76yvy5	293	39	,	,	,
cord-004862-yv76yvy5	293	40	a	a	DT
cord-004862-yv76yvy5	293	41	length	length	NN
cord-004862-yv76yvy5	293	42	from	from	IN
cord-004862-yv76yvy5	293	43	5	5	CD
cord-004862-yv76yvy5	293	44	to	to	IN
cord-004862-yv76yvy5	293	45	7.5	7.5	CD
cord-004862-yv76yvy5	293	46	kb	kb	NNP
cord-004862-yv76yvy5	293	47	,	,	,
cord-004862-yv76yvy5	293	48	and	and	CC
cord-004862-yv76yvy5	293	49	a	a	DT
cord-004862-yv76yvy5	293	50	3	3	CD
cord-004862-yv76yvy5	293	51	'	'	POS
cord-004862-yv76yvy5	293	52	untranslated	untranslated	JJ
cord-004862-yv76yvy5	293	53	region	region	NN
cord-004862-yv76yvy5	293	54	with	with	IN
cord-004862-yv76yvy5	293	55	a	a	DT
cord-004862-yv76yvy5	293	56	sequence	sequence	NN
cord-004862-yv76yvy5	293	57	similar	similar	JJ
cord-004862-yv76yvy5	293	58	to	to	IN
cord-004862-yv76yvy5	293	59	AATAAA	AATAAA	NNP
cord-004862-yv76yvy5	293	60	close	close	RB
cord-004862-yv76yvy5	293	61	to	to	IN
cord-004862-yv76yvy5	293	62	the	the	DT
cord-004862-yv76yvy5	293	63	3	3	CD
cord-004862-yv76yvy5	293	64	'	'	''
cord-004862-yv76yvy5	293	65	end	end	NN
cord-004862-yv76yvy5	293	66	.	.	.
cord-004862-yv76yvy5	294	1	The	the	DT
cord-004862-yv76yvy5	294	2	dicistronic	dicistronic	JJ
cord-004862-yv76yvy5	294	3	structure	structure	NN
cord-004862-yv76yvy5	294	4	proposed	propose	VBD
cord-004862-yv76yvy5	294	5	for	for	IN
cord-004862-yv76yvy5	294	6	L1Oc	L1Oc	NNP
cord-004862-yv76yvy5	294	7	and	and	CC
cord-004862-yv76yvy5	294	8	LIHs	lih	NNS
cord-004862-yv76yvy5	294	9	may	may	MD
cord-004862-yv76yvy5	294	10	also	also	RB
cord-004862-yv76yvy5	294	11	be	be	VB
cord-004862-yv76yvy5	294	12	present	present	JJ
cord-004862-yv76yvy5	294	13	in	in	IN
cord-004862-yv76yvy5	294	14	the	the	DT
cord-004862-yv76yvy5	294	15	I	-PRON-	PRP
cord-004862-yv76yvy5	294	16	factor	factor	NN
cord-004862-yv76yvy5	294	17	,	,	,
cord-004862-yv76yvy5	294	18	the	the	DT
cord-004862-yv76yvy5	294	19	F	F	NNP
cord-004862-yv76yvy5	294	20	element	element	NN
cord-004862-yv76yvy5	294	21	,	,	,
cord-004862-yv76yvy5	294	22	and	and	CC
cord-004862-yv76yvy5	294	23	the	the	DT
cord-004862-yv76yvy5	294	24	R	r	NN
cord-004862-yv76yvy5	294	25	IBm	ibm	NN
cord-004862-yv76yvy5	294	26	repeat	repeat	NN
cord-004862-yv76yvy5	294	27	(	(	-LRB-
cord-004862-yv76yvy5	295	1	Fawcett	Fawcett	NNP
cord-004862-yv76yvy5	295	2	et	et	NNP
cord-004862-yv76yvy5	295	3	al	al	NNP
cord-004862-yv76yvy5	295	4	.	.	NNP
cord-004862-yv76yvy5	295	5	1986	1986	CD
cord-004862-yv76yvy5	295	6	;	;	:
cord-004862-yv76yvy5	295	7	DiNocera	DiNocera	NNP
cord-004862-yv76yvy5	295	8	and	and	CC
cord-004862-yv76yvy5	295	9	Casari	Casari	NNP
cord-004862-yv76yvy5	295	10	1987	1987	CD
cord-004862-yv76yvy5	295	11	;	;	:
cord-004862-yv76yvy5	295	12	Xiong	Xiong	NNP
cord-004862-yv76yvy5	295	13	and	and	CC
cord-004862-yv76yvy5	295	14	Eickbush	Eickbush	NNP
cord-004862-yv76yvy5	295	15	1988	1988	CD
cord-004862-yv76yvy5	295	16	)	)	-RRB-
cord-004862-yv76yvy5	295	17	.	.	.
cord-004862-yv76yvy5	296	1	Each	each	DT
cord-004862-yv76yvy5	296	2	type	type	NN
cord-004862-yv76yvy5	296	3	of	of	IN
cord-004862-yv76yvy5	296	4	repeated	repeat	VBN
cord-004862-yv76yvy5	296	5	element	element	NN
cord-004862-yv76yvy5	296	6	also	also	RB
cord-004862-yv76yvy5	296	7	has	have	VBZ
cord-004862-yv76yvy5	296	8	some	some	DT
cord-004862-yv76yvy5	296	9	distinctive	distinctive	JJ
cord-004862-yv76yvy5	296	10	features	feature	NNS
cord-004862-yv76yvy5	296	11	,	,	,
cord-004862-yv76yvy5	296	12	e.g.	e.g.	RB
cord-004862-yv76yvy5	296	13	,	,	,
cord-004862-yv76yvy5	296	14	the	the	DT
cord-004862-yv76yvy5	296	15	specific	specific	JJ
cord-004862-yv76yvy5	296	16	insertion	insertion	NN
cord-004862-yv76yvy5	296	17	sites	site	NNS
cord-004862-yv76yvy5	296	18	for	for	IN
cord-004862-yv76yvy5	296	19	R1Bm	R1Bm	NNS
cord-004862-yv76yvy5	296	20	and	and	CC
cord-004862-yv76yvy5	296	21	R2Bm	R2Bm	NNPS
cord-004862-yv76yvy5	296	22	in	in	IN
cord-004862-yv76yvy5	296	23	the	the	DT
cord-004862-yv76yvy5	296	24	rRNA	rRNA	NNP
cord-004862-yv76yvy5	296	25	genes	gene	NNS
cord-004862-yv76yvy5	296	26	and	and	CC
cord-004862-yv76yvy5	296	27	the	the	DT
cord-004862-yv76yvy5	296	28	absence	absence	NN
cord-004862-yv76yvy5	296	29	of	of	IN
cord-004862-yv76yvy5	296	30	A	a	DT
cord-004862-yv76yvy5	296	31	-	-	HYPH
cord-004862-yv76yvy5	296	32	rich	rich	JJ
cord-004862-yv76yvy5	296	33	tracts	tract	NNS
cord-004862-yv76yvy5	296	34	at	at	IN
cord-004862-yv76yvy5	296	35	the	the	DT
cord-004862-yv76yvy5	296	36	3	3	NN
cord-004862-yv76yvy5	296	37	'	'	''
cord-004862-yv76yvy5	296	38	ends	end	NNS
cord-004862-yv76yvy5	296	39	of	of	IN
cord-004862-yv76yvy5	296	40	some	some	DT
cord-004862-yv76yvy5	296	41	of	of	IN
cord-004862-yv76yvy5	296	42	the	the	DT
cord-004862-yv76yvy5	296	43	insect	insect	NN
cord-004862-yv76yvy5	296	44	repeats	repeat	VBZ
cord-004862-yv76yvy5	296	45	.	.	.
cord-004862-yv76yvy5	297	1	However	however	RB
cord-004862-yv76yvy5	297	2	,	,	,
cord-004862-yv76yvy5	297	3	at	at	IN
cord-004862-yv76yvy5	297	4	least	least	JJS
cord-004862-yv76yvy5	297	5	parts	part	NNS
cord-004862-yv76yvy5	297	6	of	of	IN
cord-004862-yv76yvy5	297	7	these	these	DT
cord-004862-yv76yvy5	297	8	repeats	repeat	NNS
cord-004862-yv76yvy5	297	9	in	in	IN
cord-004862-yv76yvy5	297	10	mammals	mammal	NNS
cord-004862-yv76yvy5	297	11	,	,	,
cord-004862-yv76yvy5	297	12	insects	insect	NNS
cord-004862-yv76yvy5	297	13	,	,	,
cord-004862-yv76yvy5	297	14	and	and	CC
cord-004862-yv76yvy5	297	15	a	a	DT
cord-004862-yv76yvy5	297	16	parasitic	parasitic	JJ
cord-004862-yv76yvy5	297	17	protozoan	protozoan	NN
cord-004862-yv76yvy5	297	18	appear	appear	VBP
cord-004862-yv76yvy5	297	19	to	to	TO
cord-004862-yv76yvy5	297	20	be	be	VB
cord-004862-yv76yvy5	297	21	evolutionarily	evolutionarily	RB
cord-004862-yv76yvy5	297	22	related	relate	VBN
cord-004862-yv76yvy5	297	23	.	.	.
cord-004862-yv76yvy5	298	1	If	if	IN
cord-004862-yv76yvy5	298	2	this	this	DT
cord-004862-yv76yvy5	298	3	type	type	NN
cord-004862-yv76yvy5	298	4	of	of	IN
cord-004862-yv76yvy5	298	5	repeat	repeat	NN
cord-004862-yv76yvy5	298	6	is	be	VBZ
cord-004862-yv76yvy5	298	7	restricted	restrict	VBN
cord-004862-yv76yvy5	298	8	to	to	IN
cord-004862-yv76yvy5	298	9	these	these	DT
cord-004862-yv76yvy5	298	10	groups	group	NNS
cord-004862-yv76yvy5	298	11	of	of	IN
cord-004862-yv76yvy5	298	12	organisms	organism	NNS
cord-004862-yv76yvy5	298	13	,	,	,
cord-004862-yv76yvy5	298	14	it	-PRON-	PRP
cord-004862-yv76yvy5	298	15	may	may	MD
cord-004862-yv76yvy5	298	16	indicate	indicate	VB
cord-004862-yv76yvy5	298	17	that	that	IN
cord-004862-yv76yvy5	298	18	the	the	DT
cord-004862-yv76yvy5	298	19	genetic	genetic	JJ
cord-004862-yv76yvy5	298	20	information	information	NN
cord-004862-yv76yvy5	298	21	was	be	VBD
cord-004862-yv76yvy5	298	22	transferred	transfer	VBN
cord-004862-yv76yvy5	298	23	among	among	IN
cord-004862-yv76yvy5	298	24	parasites	parasite	NNS
cord-004862-yv76yvy5	298	25	,	,	,
cord-004862-yv76yvy5	298	26	their	-PRON-	PRP$
cord-004862-yv76yvy5	298	27	mammalian	mammalian	JJ
cord-004862-yv76yvy5	298	28	hosts	host	NNS
cord-004862-yv76yvy5	298	29	,	,	,
cord-004862-yv76yvy5	298	30	and	and	CC
cord-004862-yv76yvy5	298	31	insect	insect	NN
cord-004862-yv76yvy5	298	32	vectors	vector	NNS
cord-004862-yv76yvy5	298	33	(	(	-LRB-
cord-004862-yv76yvy5	298	34	K.immel	K.immel	NNP
cord-004862-yv76yvy5	298	35	et	et	NNP
cord-004862-yv76yvy5	298	36	al	al	NNP
cord-004862-yv76yvy5	298	37	.	.	NNP
cord-004862-yv76yvy5	298	38	1987	1987	CD
cord-004862-yv76yvy5	298	39	)	)	-RRB-
cord-004862-yv76yvy5	298	40	.	.	.
cord-004862-yv76yvy5	299	1	A	a	DT
cord-004862-yv76yvy5	299	2	viral	viral	JJ
cord-004862-yv76yvy5	299	3	progenitor	progenitor	NN
cord-004862-yv76yvy5	299	4	,	,	,
cord-004862-yv76yvy5	299	5	suggested	suggest	VBN
cord-004862-yv76yvy5	299	6	by	by	IN
cord-004862-yv76yvy5	299	7	the	the	DT
cord-004862-yv76yvy5	299	8	dicistronic	dicistronic	JJ
cord-004862-yv76yvy5	299	9	arrangement	arrangement	NN
cord-004862-yv76yvy5	299	10	shown	show	VBN
cord-004862-yv76yvy5	299	11	in	in	IN
cord-004862-yv76yvy5	299	12	this	this	DT
cord-004862-yv76yvy5	299	13	paper	paper	NN
cord-004862-yv76yvy5	299	14	,	,	,
cord-004862-yv76yvy5	299	15	would	would	MD
cord-004862-yv76yvy5	299	16	provide	provide	VB
cord-004862-yv76yvy5	299	17	a	a	DT
cord-004862-yv76yvy5	299	18	means	means	NN
cord-004862-yv76yvy5	299	19	for	for	IN
cord-004862-yv76yvy5	299	20	the	the	DT
cord-004862-yv76yvy5	299	21	horizontal	horizontal	JJ
cord-004862-yv76yvy5	299	22	transmission	transmission	NN
cord-004862-yv76yvy5	299	23	of	of	IN
cord-004862-yv76yvy5	299	24	the	the	DT
cord-004862-yv76yvy5	299	25	L1	L1	NNP
cord-004862-yv76yvy5	299	26	sequences	sequence	NNS
cord-004862-yv76yvy5	299	27	.	.	.
cord-004862-yv76yvy5	300	1	Retroviruses	retrovirus	NNS
cord-004862-yv76yvy5	300	2	and	and	CC
cord-004862-yv76yvy5	300	3	retrotransposons	retrotransposon	NNS
cord-004862-yv76yvy5	300	4	:	:	:
cord-004862-yv76yvy5	300	5	the	the	DT
cord-004862-yv76yvy5	300	6	role	role	NN
cord-004862-yv76yvy5	300	7	of	of	IN
cord-004862-yv76yvy5	300	8	reverse	reverse	JJ
cord-004862-yv76yvy5	300	9	transcription	transcription	NN
cord-004862-yv76yvy5	300	10	in	in	IN
cord-004862-yv76yvy5	300	11	shaping	shape	VBG
cord-004862-yv76yvy5	300	12	the	the	DT
cord-004862-yv76yvy5	300	13	eukaryotic	eukaryotic	JJ
cord-004862-yv76yvy5	300	14	genome	genome	NN
cord-004862-yv76yvy5	300	15	Screening	Screening	NNP
cord-004862-yv76yvy5	300	16	Xgt	Xgt	NNP
cord-004862-yv76yvy5	300	17	recombinant	recombinant	JJ
cord-004862-yv76yvy5	300	18	clones	clone	NNS
cord-004862-yv76yvy5	300	19	by	by	IN
cord-004862-yv76yvy5	300	20	hybridization	hybridization	NN
cord-004862-yv76yvy5	300	21	to	to	IN
cord-004862-yv76yvy5	300	22	single	single	JJ
cord-004862-yv76yvy5	300	23	plaques	plaque	NNS
cord-004862-yv76yvy5	300	24	in	in	IN
cord-004862-yv76yvy5	300	25	situ	situ	JJ
cord-004862-yv76yvy5	300	26	Organization	organization	NN
cord-004862-yv76yvy5	300	27	and	and	CC
cord-004862-yv76yvy5	300	28	evolutionary	evolutionary	JJ
cord-004862-yv76yvy5	300	29	progress	progress	NN
cord-004862-yv76yvy5	300	30	of	of	IN
cord-004862-yv76yvy5	300	31	a	a	DT
cord-004862-yv76yvy5	300	32	dispersed	disperse	VBN
cord-004862-yv76yvy5	300	33	repetitive	repetitive	JJ
cord-004862-yv76yvy5	300	34	family	family	NN
cord-004862-yv76yvy5	300	35	of	of	IN
cord-004862-yv76yvy5	300	36	sequences	sequence	NNS
cord-004862-yv76yvy5	300	37	in	in	IN
cord-004862-yv76yvy5	300	38	widely	widely	RB
cord-004862-yv76yvy5	300	39	separated	separate	VBN
cord-004862-yv76yvy5	300	40	rodent	rodent	NN
cord-004862-yv76yvy5	300	41	genomes	genome	NNS
cord-004862-yv76yvy5	300	42	The	the	DT
cord-004862-yv76yvy5	300	43	site	site	NN
cord-004862-yv76yvy5	300	44	-	-	HYPH
cord-004862-yv76yvy5	300	45	specific	specific	JJ
cord-004862-yv76yvy5	300	46	ribosomal	ribosomal	JJ
cord-004862-yv76yvy5	300	47	insertion	insertion	NN
cord-004862-yv76yvy5	300	48	element	element	NN
cord-004862-yv76yvy5	300	49	type	type	NN
cord-004862-yv76yvy5	300	50	II	II	NNP
cord-004862-yv76yvy5	300	51	ofBombyx	ofBombyx	NNP
cord-004862-yv76yvy5	300	52	mori	mori	NN
cord-004862-yv76yvy5	300	53	(	(	-LRB-
cord-004862-yv76yvy5	300	54	R2Bm	R2Bm	NFP
cord-004862-yv76yvy5	300	55	)	)	-RRB-
cord-004862-yv76yvy5	300	56	contains	contain	VBZ
cord-004862-yv76yvy5	300	57	the	the	DT
cord-004862-yv76yvy5	300	58	coding	code	VBG
cord-004862-yv76yvy5	300	59	sequence	sequence	NN
cord-004862-yv76yvy5	300	60	for	for	IN
cord-004862-yv76yvy5	300	61	a	a	DT
cord-004862-yv76yvy5	300	62	reverse	reverse	JJ
cord-004862-yv76yvy5	300	63	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	300	64	-	-	HYPH
cord-004862-yv76yvy5	300	65	like	like	JJ
cord-004862-yv76yvy5	300	66	enzyme	enzyme	NN
cord-004862-yv76yvy5	300	67	Conservationthroughoutmammaliaand	Conservationthroughoutmammaliaand	NNP
cord-004862-yv76yvy5	300	68	extensive	extensive	JJ
cord-004862-yv76yvy5	300	69	protein	protein	NN
cord-004862-yv76yvy5	300	70	encoding	encoding	NN
cord-004862-yv76yvy5	300	71	capacity	capacity	NN
cord-004862-yv76yvy5	300	72	of	of	IN
cord-004862-yv76yvy5	300	73	the	the	DT
cord-004862-yv76yvy5	300	74	highly	highly	RB
cord-004862-yv76yvy5	300	75	repeated	repeat	VBN
cord-004862-yv76yvy5	300	76	DNA	DNA	NNP
cord-004862-yv76yvy5	300	77	LI	LI	NNP
cord-004862-yv76yvy5	300	78	Genomic	Genomic	NNP
cord-004862-yv76yvy5	300	79	sequencing	sequencing	NN
cord-004862-yv76yvy5	300	80	Structure	Structure	NNP
cord-004862-yv76yvy5	300	81	of	of	IN
cord-004862-yv76yvy5	300	82	the	the	DT
cord-004862-yv76yvy5	300	83	highly	highly	RB
cord-004862-yv76yvy5	300	84	repeated	repeat	VBN
cord-004862-yv76yvy5	300	85	,	,	,
cord-004862-yv76yvy5	300	86	long	long	RB
cord-004862-yv76yvy5	300	87	interspersed	intersperse	VBN
cord-004862-yv76yvy5	300	88	18	18	CD
cord-004862-yv76yvy5	300	89	DNA	dna	NN
cord-004862-yv76yvy5	300	90	family	family	NN
cord-004862-yv76yvy5	300	91	(	(	-LRB-
cord-004862-yv76yvy5	300	92	LINE	LINE	NNP
cord-004862-yv76yvy5	300	93	or	or	CC
cord-004862-yv76yvy5	300	94	L1Rn	l1rn	CD
cord-004862-yv76yvy5	300	95	)	)	-RRB-
cord-004862-yv76yvy5	300	96	of	of	IN
cord-004862-yv76yvy5	300	97	the	the	DT
cord-004862-yv76yvy5	300	98	rat	rat	NN
cord-004862-yv76yvy5	300	99	Long	Long	NNP
cord-004862-yv76yvy5	300	100	interspersed	intersperse	VBD
cord-004862-yv76yvy5	300	101	L1	L1	NNP
cord-004862-yv76yvy5	300	102	repeats	repeat	VBZ
cord-004862-yv76yvy5	300	103	in	in	IN
cord-004862-yv76yvy5	300	104	rabbit	rabbit	NN
cord-004862-yv76yvy5	300	105	DNA	dna	NN
cord-004862-yv76yvy5	300	106	are	be	VBP
cord-004862-yv76yvy5	300	107	homologous	homologous	JJ
cord-004862-yv76yvy5	300	108	to	to	IN
cord-004862-yv76yvy5	300	109	L1	L1	NNP
cord-004862-yv76yvy5	300	110	repeats	repeat	NNS
cord-004862-yv76yvy5	300	111	of	of	IN
cord-004862-yv76yvy5	300	112	rodents	rodent	NNS
cord-004862-yv76yvy5	300	113	and	and	CC
cord-004862-yv76yvy5	300	114	primates	primate	NNS
cord-004862-yv76yvy5	300	115	in	in	IN
cord-004862-yv76yvy5	301	1	an	an	DT
cord-004862-yv76yvy5	301	2	open	open	JJ
cord-004862-yv76yvy5	301	3	-	-	HYPH
cord-004862-yv76yvy5	301	4	reading	read	VBG
cord-004862-yv76yvy5	301	5	-	-	HYPH
cord-004862-yv76yvy5	301	6	frame	frame	NN
cord-004862-yv76yvy5	301	7	region	region	NN
cord-004862-yv76yvy5	301	8	Related	relate	VBN
cord-004862-yv76yvy5	301	9	polypeptides	polypeptide	NNS
cord-004862-yv76yvy5	301	10	are	be	VBP
cord-004862-yv76yvy5	301	11	encoded	encode	VBN
cord-004862-yv76yvy5	301	12	by	by	IN
cord-004862-yv76yvy5	301	13	Drosophila	Drosophila	NNP
cord-004862-yv76yvy5	301	14	F	F	NNP
cord-004862-yv76yvy5	301	15	elements	element	NNS
cord-004862-yv76yvy5	301	16	,	,	,
cord-004862-yv76yvy5	301	17	I	-PRON-	PRP
cord-004862-yv76yvy5	301	18	factors	factor	NNS
cord-004862-yv76yvy5	301	19	,	,	,
cord-004862-yv76yvy5	301	20	and	and	CC
cord-004862-yv76yvy5	301	21	mammalian	mammalian	JJ
cord-004862-yv76yvy5	301	22	L1	L1	NNP
cord-004862-yv76yvy5	301	23	repeats	repeat	VBZ
cord-004862-yv76yvy5	301	24	Insertion	insertion	NN
cord-004862-yv76yvy5	301	25	of	of	IN
cord-004862-yv76yvy5	301	26	long	long	JJ
cord-004862-yv76yvy5	301	27	interspersed	intersperse	VBN
cord-004862-yv76yvy5	301	28	repeated	repeat	VBN
cord-004862-yv76yvy5	301	29	elements	element	NNS
cord-004862-yv76yvy5	301	30	at	at	IN
cord-004862-yv76yvy5	301	31	the	the	DT
cord-004862-yv76yvy5	301	32	lgh	lgh	NNP
cord-004862-yv76yvy5	301	33	(	(	-LRB-
cord-004862-yv76yvy5	301	34	immunoglobulin	immunoglobulin	NN
cord-004862-yv76yvy5	301	35	heavy	heavy	JJ
cord-004862-yv76yvy5	301	36	chain	chain	NN
cord-004862-yv76yvy5	301	37	)	)	-RRB-
cord-004862-yv76yvy5	301	38	and	and	CC
cord-004862-yv76yvy5	301	39	Mlvi-2	Mlvi-2	NNP
cord-004862-yv76yvy5	302	1	(	(	-LRB-
cord-004862-yv76yvy5	302	2	Moloney	Moloney	NNP
cord-004862-yv76yvy5	302	3	leukemia	leukemia	NN
cord-004862-yv76yvy5	302	4	virus	virus	NN
cord-004862-yv76yvy5	302	5	integration	integration	NN
cord-004862-yv76yvy5	302	6	2	2	CD
cord-004862-yv76yvy5	302	7	)	)	-RRB-
cord-004862-yv76yvy5	302	8	loci	locus	NNS
cord-004862-yv76yvy5	302	9	of	of	IN
cord-004862-yv76yvy5	302	10	rats	rat	NNS
cord-004862-yv76yvy5	303	1	Characterization	characterization	NN
cord-004862-yv76yvy5	303	2	ofa	ofa	VBP
cord-004862-yv76yvy5	303	3	highly	highly	RB
cord-004862-yv76yvy5	303	4	repetitive	repetitive	JJ
cord-004862-yv76yvy5	303	5	family	family	NN
cord-004862-yv76yvy5	303	6	of	of	IN
cord-004862-yv76yvy5	303	7	DNA	dna	NN
cord-004862-yv76yvy5	303	8	sequences	sequence	NNS
cord-004862-yv76yvy5	303	9	in	in	IN
cord-004862-yv76yvy5	303	10	the	the	DT
cord-004862-yv76yvy5	303	11	mouse	mouse	NN
cord-004862-yv76yvy5	304	1	The	the	DT
cord-004862-yv76yvy5	304	2	LINE-1	LINE-1	NNP
cord-004862-yv76yvy5	304	3	DNA	dna	NN
cord-004862-yv76yvy5	304	4	sequences	sequence	NNS
cord-004862-yv76yvy5	304	5	in	in	IN
cord-004862-yv76yvy5	304	6	four	four	CD
cord-004862-yv76yvy5	304	7	mammalian	mammalian	JJ
cord-004862-yv76yvy5	304	8	orders	order	NNS
cord-004862-yv76yvy5	304	9	predict	predict	VBP
cord-004862-yv76yvy5	304	10	proteins	protein	NNS
cord-004862-yv76yvy5	304	11	thin	thin	JJ
cord-004862-yv76yvy5	304	12	conserve	conserve	VBP
cord-004862-yv76yvy5	304	13	homologies	homology	NNS
cord-004862-yv76yvy5	304	14	to	to	IN
cord-004862-yv76yvy5	304	15	retrovirus	retrovirus	NN
cord-004862-yv76yvy5	304	16	proteins	protein	NNS
cord-004862-yv76yvy5	305	1	Transposable	transposable	JJ
cord-004862-yv76yvy5	305	2	elements	element	NNS
cord-004862-yv76yvy5	305	3	controlling	control	VBG
cord-004862-yv76yvy5	305	4	I	I	NNP
cord-004862-yv76yvy5	305	5	-	-	HYPH
cord-004862-yv76yvy5	305	6	R	r	NN
cord-004862-yv76yvy5	305	7	hybrid	hybrid	NN
cord-004862-yv76yvy5	305	8	dysgenesis	dysgenesis	NN
cord-004862-yv76yvy5	305	9	in	in	IN
cord-004862-yv76yvy5	305	10	D.	D.	NNP
cord-004862-yv76yvy5	305	11	metanogaster	metanogaster	NNP
cord-004862-yv76yvy5	305	12	are	be	VBP
cord-004862-yv76yvy5	305	13	similar	similar	JJ
cord-004862-yv76yvy5	305	14	to	to	IN
cord-004862-yv76yvy5	305	15	mammalian	mammalian	JJ
cord-004862-yv76yvy5	305	16	LINEs	line	NNS
cord-004862-yv76yvy5	305	17	Defining	define	VBG
cord-004862-yv76yvy5	305	18	the	the	DT
cord-004862-yv76yvy5	305	19	beginning	beginning	NN
cord-004862-yv76yvy5	305	20	and	and	CC
cord-004862-yv76yvy5	305	21	end	end	NN
cord-004862-yv76yvy5	305	22	of	of	IN
cord-004862-yv76yvy5	305	23	KpnI	KpnI	NNP
cord-004862-yv76yvy5	305	24	family	family	NN
cord-004862-yv76yvy5	305	25	segments	segment	NNS
cord-004862-yv76yvy5	305	26	Evolution	evolution	NN
cord-004862-yv76yvy5	305	27	of	of	IN
cord-004862-yv76yvy5	305	28	the	the	DT
cord-004862-yv76yvy5	305	29	mammalian	mammalian	JJ
cord-004862-yv76yvy5	305	30	fl	fl	NNP
cord-004862-yv76yvy5	305	31	-	-	HYPH
cord-004862-yv76yvy5	305	32	globin	globin	NN
cord-004862-yv76yvy5	305	33	gene	gene	NN
cord-004862-yv76yvy5	305	34	cluster	cluster	NN
cord-004862-yv76yvy5	305	35	Comparison	comparison	NN
cord-004862-yv76yvy5	305	36	of	of	IN
cord-004862-yv76yvy5	305	37	the	the	DT
cord-004862-yv76yvy5	305	38	~8	~8	NNP
cord-004862-yv76yvy5	305	39	-	-	HYPH
cord-004862-yv76yvy5	305	40	1ike	1ike	CD
cord-004862-yv76yvy5	305	41	globin	globin	NN
cord-004862-yv76yvy5	305	42	gene	gene	NN
cord-004862-yv76yvy5	305	43	families	family	NNS
cord-004862-yv76yvy5	305	44	of	of	IN
cord-004862-yv76yvy5	305	45	rabbits	rabbit	NNS
cord-004862-yv76yvy5	305	46	and	and	CC
cord-004862-yv76yvy5	305	47	humans	human	NNS
cord-004862-yv76yvy5	305	48	indicates	indicate	VBZ
cord-004862-yv76yvy5	305	49	that	that	IN
cord-004862-yv76yvy5	305	50	the	the	DT
cord-004862-yv76yvy5	305	51	gene	gene	NN
cord-004862-yv76yvy5	305	52	cluster	cluster	NN
cord-004862-yv76yvy5	305	53	5'-~-3'-fi	5'-~-3'-fi	CD
cord-004862-yv76yvy5	305	54	-	-	HYPH
cord-004862-yv76yvy5	305	55	fl-3	fl-3	NNP
cord-004862-yv76yvy5	305	56	'	'	''
cord-004862-yv76yvy5	305	57	predates	predate	VBZ
cord-004862-yv76yvy5	305	58	the	the	DT
cord-004862-yv76yvy5	305	59	mammalian	mammalian	JJ
cord-004862-yv76yvy5	305	60	radiation	radiation	NN
cord-004862-yv76yvy5	305	61	Efstratiadis	Efstratiadis	NNP
cord-004862-yv76yvy5	305	62	A	A	NNP
cord-004862-yv76yvy5	305	63	(	(	-LRB-
cord-004862-yv76yvy5	305	64	1979	1979	CD
cord-004862-yv76yvy5	305	65	)	)	-RRB-
cord-004862-yv76yvy5	306	1	The	the	DT
cord-004862-yv76yvy5	306	2	structure	structure	NN
cord-004862-yv76yvy5	306	3	and	and	CC
cord-004862-yv76yvy5	306	4	transcription	transcription	NN
cord-004862-yv76yvy5	306	5	of	of	IN
cord-004862-yv76yvy5	306	6	four	four	CD
cord-004862-yv76yvy5	306	7	linked	link	VBN
cord-004862-yv76yvy5	307	1	rabbit/~-like	rabbit/~-like	:
cord-004862-yv76yvy5	307	2	globin	globin	NN
cord-004862-yv76yvy5	307	3	genes	gene	NNS
cord-004862-yv76yvy5	307	4	Sequence	Sequence	NNP
cord-004862-yv76yvy5	307	5	analysis	analysis	NN
cord-004862-yv76yvy5	307	6	of	of	IN
cord-004862-yv76yvy5	307	7	a	a	DT
cord-004862-yv76yvy5	307	8	KpnI	KpnI	NNP
cord-004862-yv76yvy5	307	9	family	family	NN
cord-004862-yv76yvy5	307	10	member	member	NN
cord-004862-yv76yvy5	307	11	near	near	IN
cord-004862-yv76yvy5	307	12	the	the	DT
cord-004862-yv76yvy5	307	13	3	3	CD
cord-004862-yv76yvy5	307	14	'	'	NN
cord-004862-yv76yvy5	307	15	end	end	NN
cord-004862-yv76yvy5	307	16	of	of	IN
cord-004862-yv76yvy5	307	17	human	human	JJ
cord-004862-yv76yvy5	307	18	fl	fl	JJ
cord-004862-yv76yvy5	307	19	-	-	HYPH
cord-004862-yv76yvy5	307	20	globin	globin	NN
cord-004862-yv76yvy5	307	21	gene	gene	NN
cord-004862-yv76yvy5	307	22	LI	LI	NNP
cord-004862-yv76yvy5	307	23	family	family	NN
cord-004862-yv76yvy5	307	24	of	of	IN
cord-004862-yv76yvy5	307	25	repetitive	repetitive	JJ
cord-004862-yv76yvy5	307	26	DNA	dna	NN
cord-004862-yv76yvy5	307	27	sequences	sequence	NNS
cord-004862-yv76yvy5	307	28	in	in	IN
cord-004862-yv76yvy5	307	29	primates	primate	NNS
cord-004862-yv76yvy5	307	30	may	may	MD
cord-004862-yv76yvy5	307	31	be	be	VB
cord-004862-yv76yvy5	307	32	derived	derive	VBN
cord-004862-yv76yvy5	307	33	from	from	IN
cord-004862-yv76yvy5	307	34	a	a	DT
cord-004862-yv76yvy5	307	35	sequence	sequence	NN
cord-004862-yv76yvy5	307	36	encoding	encode	VBG
cord-004862-yv76yvy5	307	37	a	a	DT
cord-004862-yv76yvy5	307	38	reverse	reverse	JJ
cord-004862-yv76yvy5	307	39	transcriptase	transcriptase	NN
cord-004862-yv76yvy5	307	40	-	-	HYPH
cord-004862-yv76yvy5	307	41	related	relate	VBN
cord-004862-yv76yvy5	307	42	protein	protein	NN
cord-004862-yv76yvy5	307	43	Structure	structure	NN
cord-004862-yv76yvy5	307	44	ofa	ofa	NN
cord-004862-yv76yvy5	307	45	gene	gene	NN
cord-004862-yv76yvy5	307	46	for	for	IN
cord-004862-yv76yvy5	307	47	the	the	DT
cord-004862-yv76yvy5	307	48	human	human	JJ
cord-004862-yv76yvy5	307	49	epidermal	epidermal	JJ
cord-004862-yv76yvy5	307	50	67-kDa	67-kda	CD
cord-004862-yv76yvy5	307	51	keratin	keratin	NN
cord-004862-yv76yvy5	307	52	Retroposon	Retroposon	NNP
cord-004862-yv76yvy5	307	53	"	"	''
cord-004862-yv76yvy5	307	54	insertion	insertion	NN
cord-004862-yv76yvy5	307	55	into	into	IN
cord-004862-yv76yvy5	307	56	the	the	DT
cord-004862-yv76yvy5	307	57	cellular	cellular	JJ
cord-004862-yv76yvy5	307	58	oncogene	oncogene	NN
cord-004862-yv76yvy5	307	59	c	c	NN
cord-004862-yv76yvy5	307	60	-	-	HYPH
cord-004862-yv76yvy5	307	61	myc	myc	NNP
cord-004862-yv76yvy5	307	62	in	in	IN
cord-004862-yv76yvy5	307	63	canine	canine	JJ
cord-004862-yv76yvy5	307	64	transmissible	transmissible	JJ
cord-004862-yv76yvy5	307	65	venereal	venereal	NN
cord-004862-yv76yvy5	307	66	tumor	tumor	NN
cord-004862-yv76yvy5	307	67	Ingi	Ingi	NNP
cord-004862-yv76yvy5	307	68	,	,	,
cord-004862-yv76yvy5	307	69	a	a	DT
cord-004862-yv76yvy5	307	70	5.2-kb	5.2-kb	CD
cord-004862-yv76yvy5	307	71	dispersed	disperse	VBN
cord-004862-yv76yvy5	307	72	sequence	sequence	NN
cord-004862-yv76yvy5	307	73	element	element	NN
cord-004862-yv76yvy5	307	74	from	from	IN
cord-004862-yv76yvy5	307	75	Trypanosoma	Trypanosoma	NNP
cord-004862-yv76yvy5	307	76	brucei	brucei	NNP
cord-004862-yv76yvy5	307	77	that	that	WDT
cord-004862-yv76yvy5	307	78	carries	carry	VBZ
cord-004862-yv76yvy5	307	79	half	half	NN
cord-004862-yv76yvy5	307	80	of	of	IN
cord-004862-yv76yvy5	307	81	a	a	DT
cord-004862-yv76yvy5	307	82	smaller	small	JJR
cord-004862-yv76yvy5	307	83	mobile	mobile	JJ
cord-004862-yv76yvy5	307	84	element	element	NN
cord-004862-yv76yvy5	307	85	at	at	IN
cord-004862-yv76yvy5	307	86	either	either	DT
cord-004862-yv76yvy5	307	87	end	end	NN
cord-004862-yv76yvy5	307	88	and	and	CC
cord-004862-yv76yvy5	307	89	has	have	VBZ
cord-004862-yv76yvy5	307	90	homology	homology	NN
cord-004862-yv76yvy5	307	91	with	with	IN
cord-004862-yv76yvy5	307	92	mammalian	mammalian	JJ
cord-004862-yv76yvy5	307	93	LINEs	line	NNS
cord-004862-yv76yvy5	307	94	Human	Human	NNP
cord-004862-yv76yvy5	307	95	genome	genome	NN
cord-004862-yv76yvy5	307	96	organization	organization	NN
cord-004862-yv76yvy5	307	97	:	:	:
cord-004862-yv76yvy5	307	98	Alu	Alu	NNP
cord-004862-yv76yvy5	307	99	,	,	,
cord-004862-yv76yvy5	307	100	Lines	Lines	NNP
cord-004862-yv76yvy5	307	101	,	,	,
cord-004862-yv76yvy5	307	102	and	and	CC
cord-004862-yv76yvy5	307	103	the	the	DT
cord-004862-yv76yvy5	307	104	molecular	molecular	JJ
cord-004862-yv76yvy5	307	105	structure	structure	NN
cord-004862-yv76yvy5	307	106	of	of	IN
cord-004862-yv76yvy5	307	107	metaphase	metaphase	NN
cord-004862-yv76yvy5	307	108	chromosome	chromosome	NN
cord-004862-yv76yvy5	307	109	bands	band	NNS
cord-004862-yv76yvy5	308	1	The	the	DT
cord-004862-yv76yvy5	308	2	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	308	3	sequence	sequence	NN
cord-004862-yv76yvy5	308	4	of	of	IN
cord-004862-yv76yvy5	308	5	a	a	DT
cord-004862-yv76yvy5	308	6	rabbit	rabbit	NN
cord-004862-yv76yvy5	308	7	fl	fl	NNP
cord-004862-yv76yvy5	308	8	-	-	HYPH
cord-004862-yv76yvy5	308	9	giobin	giobin	NNP
cord-004862-yv76yvy5	308	10	pseudogene	pseudogene	NNP
cord-004862-yv76yvy5	308	11	Linkage	Linkage	NNP
cord-004862-yv76yvy5	308	12	arrangement	arrangement	NN
cord-004862-yv76yvy5	308	13	of	of	IN
cord-004862-yv76yvy5	308	14	four	four	CD
cord-004862-yv76yvy5	308	15	rabbit	rabbit	NN
cord-004862-yv76yvy5	308	16	fl	fl	NNP
cord-004862-yv76yvy5	308	17	-	-	HYPH
cord-004862-yv76yvy5	308	18	like	like	JJ
cord-004862-yv76yvy5	308	19	giobin	giobin	NNP
cord-004862-yv76yvy5	308	20	genes	gene	NNS
cord-004862-yv76yvy5	308	21	KpnI	KpnI	NNP
cord-004862-yv76yvy5	308	22	family	family	NN
cord-004862-yv76yvy5	308	23	of	of	IN
cord-004862-yv76yvy5	308	24	long	long	RB
cord-004862-yv76yvy5	308	25	interspersed	intersperse	VBN
cord-004862-yv76yvy5	308	26	repeated	repeat	VBN
cord-004862-yv76yvy5	308	27	DNA	dna	NN
cord-004862-yv76yvy5	308	28	sequences	sequence	NNS
cord-004862-yv76yvy5	308	29	in	in	IN
cord-004862-yv76yvy5	308	30	primates	primate	NNS
cord-004862-yv76yvy5	308	31	:	:	:
cord-004862-yv76yvy5	308	32	polymorphism	polymorphism	NN
cord-004862-yv76yvy5	308	33	of	of	IN
cord-004862-yv76yvy5	308	34	family	family	NN
cord-004862-yv76yvy5	308	35	members	member	NNS
cord-004862-yv76yvy5	308	36	and	and	CC
cord-004862-yv76yvy5	308	37	evidence	evidence	NN
cord-004862-yv76yvy5	308	38	for	for	IN
cord-004862-yv76yvy5	308	39	transcription	transcription	NN
cord-004862-yv76yvy5	308	40	Rapid	Rapid	NNP
cord-004862-yv76yvy5	308	41	and	and	CC
cord-004862-yv76yvy5	308	42	sensitive	sensitive	JJ
cord-004862-yv76yvy5	308	43	protein	protein	NN
cord-004862-yv76yvy5	308	44	similarity	similarity	NN
cord-004862-yv76yvy5	308	45	searches	search	NNS
cord-004862-yv76yvy5	309	1	The	the	DT
cord-004862-yv76yvy5	309	2	sequence	sequence	NN
cord-004862-yv76yvy5	309	3	of	of	IN
cord-004862-yv76yvy5	309	4	a	a	DT
cord-004862-yv76yvy5	309	5	large	large	JJ
cord-004862-yv76yvy5	309	6	L	l	NN
cord-004862-yv76yvy5	309	7	1Md	1md	JJ
cord-004862-yv76yvy5	309	8	element	element	NN
cord-004862-yv76yvy5	309	9	reveals	reveal	VBZ
cord-004862-yv76yvy5	309	10	a	a	DT
cord-004862-yv76yvy5	309	11	tandemly	tandemly	NN
cord-004862-yv76yvy5	309	12	repeated	repeat	VBN
cord-004862-yv76yvy5	309	13	5	5	CD
cord-004862-yv76yvy5	309	14	'	'	NN
cord-004862-yv76yvy5	309	15	end	end	NN
cord-004862-yv76yvy5	309	16	and	and	CC
cord-004862-yv76yvy5	309	17	several	several	JJ
cord-004862-yv76yvy5	309	18	features	feature	NNS
cord-004862-yv76yvy5	309	19	found	find	VBN
cord-004862-yv76yvy5	309	20	in	in	IN
cord-004862-yv76yvy5	309	21	retrotransposons	retrotransposon	NNS
cord-004862-yv76yvy5	310	1	The	the	DT
cord-004862-yv76yvy5	310	2	isolation	isolation	NN
cord-004862-yv76yvy5	310	3	of	of	IN
cord-004862-yv76yvy5	310	4	structural	structural	JJ
cord-004862-yv76yvy5	310	5	genes	gene	NNS
cord-004862-yv76yvy5	310	6	from	from	IN
cord-004862-yv76yvy5	310	7	libraries	library	NNS
cord-004862-yv76yvy5	310	8	of	of	IN
cord-004862-yv76yvy5	310	9	eucaryotic	eucaryotic	JJ
cord-004862-yv76yvy5	310	10	DNA	DNA	NNP
cord-004862-yv76yvy5	310	11	Nucleotide	Nucleotide	NNP
cord-004862-yv76yvy5	310	12	sequence	sequence	NN
cord-004862-yv76yvy5	310	13	definition	definition	NN
cord-004862-yv76yvy5	310	14	ofa	ofa	DT
cord-004862-yv76yvy5	310	15	major	major	JJ
cord-004862-yv76yvy5	310	16	human	human	JJ
cord-004862-yv76yvy5	310	17	repeated	repeat	VBN
cord-004862-yv76yvy5	310	18	DNA	DNA	NNP
cord-004862-yv76yvy5	310	19	,	,	,
cord-004862-yv76yvy5	310	20	the	the	DT
cord-004862-yv76yvy5	310	21	HindlII	HindlII	NNP
cord-004862-yv76yvy5	310	22	1.9	1.9	CD
cord-004862-yv76yvy5	310	23	kb	kb	NNP
cord-004862-yv76yvy5	310	24	family	family	NN
cord-004862-yv76yvy5	310	25	Complete	complete	JJ
cord-004862-yv76yvy5	310	26	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	310	27	sequence	sequence	NN
cord-004862-yv76yvy5	310	28	of	of	IN
cord-004862-yv76yvy5	310	29	the	the	DT
cord-004862-yv76yvy5	310	30	rabbit	rabbit	NN
cord-004862-yv76yvy5	310	31	fl	fl	NNP
cord-004862-yv76yvy5	310	32	-	-	HYPH
cord-004862-yv76yvy5	310	33	like	like	JJ
cord-004862-yv76yvy5	310	34	globin	globin	NN
cord-004862-yv76yvy5	310	35	gene	gene	NN
cord-004862-yv76yvy5	310	36	cluster	cluster	NN
cord-004862-yv76yvy5	310	37	:	:	:
cord-004862-yv76yvy5	310	38	analysis	analysis	NN
cord-004862-yv76yvy5	310	39	of	of	IN
cord-004862-yv76yvy5	310	40	intergenic	intergenic	JJ
cord-004862-yv76yvy5	310	41	sequences	sequence	NNS
cord-004862-yv76yvy5	310	42	and	and	CC
cord-004862-yv76yvy5	310	43	comparison	comparison	NN
cord-004862-yv76yvy5	310	44	with	with	IN
cord-004862-yv76yvy5	310	45	human	human	JJ
cord-004862-yv76yvy5	310	46	fl	fl	NNP
cord-004862-yv76yvy5	310	47	-	-	HYPH
cord-004862-yv76yvy5	310	48	like	like	JJ
cord-004862-yv76yvy5	310	49	globin	globin	NN
cord-004862-yv76yvy5	310	50	gene	gene	NN
cord-004862-yv76yvy5	310	51	cluster	cluster	NN
cord-004862-yv76yvy5	311	1	A	a	DT
cord-004862-yv76yvy5	311	2	large	large	JJ
cord-004862-yv76yvy5	311	3	interspersed	intersperse	VBN
cord-004862-yv76yvy5	311	4	repeal	repeal	NN
cord-004862-yv76yvy5	311	5	found	find	VBN
cord-004862-yv76yvy5	311	6	in	in	IN
cord-004862-yv76yvy5	311	7	mouse	mouse	NN
cord-004862-yv76yvy5	311	8	DNA	DNA	NNP
cord-004862-yv76yvy5	311	9	contains	contain	VBZ
cord-004862-yv76yvy5	311	10	a	a	DT
cord-004862-yv76yvy5	311	11	long	long	JJ
cord-004862-yv76yvy5	311	12	open	open	JJ
cord-004862-yv76yvy5	311	13	reading	reading	NN
cord-004862-yv76yvy5	311	14	frame	frame	NN
cord-004862-yv76yvy5	311	15	that	that	WDT
cord-004862-yv76yvy5	311	16	evolves	evolve	VBZ
cord-004862-yv76yvy5	311	17	as	as	IN
cord-004862-yv76yvy5	311	18	if	if	IN
cord-004862-yv76yvy5	311	19	it	-PRON-	PRP
cord-004862-yv76yvy5	311	20	encodes	encode	VBZ
cord-004862-yv76yvy5	311	21	a	a	DT
cord-004862-yv76yvy5	311	22	protein	protein	NN
cord-004862-yv76yvy5	311	23	New	New	NNP
cord-004862-yv76yvy5	311	24	M13	M13	NNP
cord-004862-yv76yvy5	311	25	vectors	vector	NNS
cord-004862-yv76yvy5	311	26	for	for	IN
cord-004862-yv76yvy5	311	27	cloning	clone	VBG
cord-004862-yv76yvy5	311	28	A	a	DT
cord-004862-yv76yvy5	311	29	transposon	transposon	NN
cord-004862-yv76yvy5	311	30	-	-	HYPH
cord-004862-yv76yvy5	311	31	like	like	JJ
cord-004862-yv76yvy5	311	32	element	element	NN
cord-004862-yv76yvy5	311	33	in	in	IN
cord-004862-yv76yvy5	311	34	human	human	JJ
cord-004862-yv76yvy5	311	35	DNA	dna	NN
cord-004862-yv76yvy5	311	36	Rearranged	rearrange	VBN
cord-004862-yv76yvy5	311	37	sequence	sequence	NN
cord-004862-yv76yvy5	311	38	of	of	IN
cord-004862-yv76yvy5	311	39	a	a	DT
cord-004862-yv76yvy5	311	40	human	human	JJ
cord-004862-yv76yvy5	311	41	KpnI	KpnI	NNP
cord-004862-yv76yvy5	311	42	element	element	NN
cord-004862-yv76yvy5	311	43	Labeling	label	VBG
cord-004862-yv76yvy5	311	44	deoxyribonucleic	deoxyribonucleic	NN
cord-004862-yv76yvy5	311	45	acid	acid	NN
cord-004862-yv76yvy5	311	46	to	to	IN
cord-004862-yv76yvy5	311	47	high	high	JJ
cord-004862-yv76yvy5	311	48	specific	specific	JJ
cord-004862-yv76yvy5	311	49	activity	activity	NN
cord-004862-yv76yvy5	311	50	in	in	IN
cord-004862-yv76yvy5	311	51	vitro	vitro	FW
cord-004862-yv76yvy5	311	52	by	by	IN
cord-004862-yv76yvy5	311	53	nick	nick	NNP
cord-004862-yv76yvy5	311	54	translation	translation	NN
cord-004862-yv76yvy5	311	55	with	with	IN
cord-004862-yv76yvy5	311	56	DNA	dna	NN
cord-004862-yv76yvy5	311	57	polymerase	polymerase	NN
cord-004862-yv76yvy5	312	1	I	-PRON-	PRP
cord-004862-yv76yvy5	312	2	Retroposons	Retroposons	NNP
cord-004862-yv76yvy5	312	3	defined	define	VBD
cord-004862-yv76yvy5	312	4	Analysis	Analysis	NNP
cord-004862-yv76yvy5	312	5	of	of	IN
cord-004862-yv76yvy5	312	6	rabbit	rabbit	NNP
cord-004862-yv76yvy5	312	7	fl	fl	NNP
cord-004862-yv76yvy5	312	8	-	-	HYPH
cord-004862-yv76yvy5	312	9	like	like	JJ
cord-004862-yv76yvy5	312	10	globin	globin	NN
cord-004862-yv76yvy5	312	11	gene	gene	NN
cord-004862-yv76yvy5	312	12	transcripts	transcript	NNS
cord-004862-yv76yvy5	312	13	during	during	IN
cord-004862-yv76yvy5	312	14	development	development	NN
cord-004862-yv76yvy5	312	15	Transcription	Transcription	NNP
cord-004862-yv76yvy5	312	16	unit	unit	NN
cord-004862-yv76yvy5	312	17	of	of	IN
cord-004862-yv76yvy5	312	18	rabbit	rabbit	NNP
cord-004862-yv76yvy5	312	19	fl	fl	NNP
cord-004862-yv76yvy5	312	20	I	I	NNP
cord-004862-yv76yvy5	312	21	-	-	HYPH
cord-004862-yv76yvy5	312	22	globin	globin	NN
cord-004862-yv76yvy5	312	23	gene	gene	NN
cord-004862-yv76yvy5	312	24	DNA	dna	NN
cord-004862-yv76yvy5	312	25	sequencing	sequencing	NN
cord-004862-yv76yvy5	312	26	with	with	IN
cord-004862-yv76yvy5	312	27	chain	chain	NN
cord-004862-yv76yvy5	312	28	-	-	HYPH
cord-004862-yv76yvy5	312	29	terminating	terminate	VBG
cord-004862-yv76yvy5	312	30	inhibitors	inhibitor	NNS
cord-004862-yv76yvy5	312	31	Origin	Origin	NNP
cord-004862-yv76yvy5	312	32	of	of	IN
cord-004862-yv76yvy5	312	33	the	the	DT
cord-004862-yv76yvy5	312	34	human	human	JJ
cord-004862-yv76yvy5	312	35	LI	LI	NNP
cord-004862-yv76yvy5	312	36	elements	element	NNS
cord-004862-yv76yvy5	312	37	:	:	:
cord-004862-yv76yvy5	312	38	proposed	propose	VBN
cord-004862-yv76yvy5	312	39	progenitor	progenitor	NN
cord-004862-yv76yvy5	312	40	genes	gene	NNS
cord-004862-yv76yvy5	312	41	deduced	deduce	VBN
cord-004862-yv76yvy5	312	42	from	from	IN
cord-004862-yv76yvy5	312	43	a	a	DT
cord-004862-yv76yvy5	312	44	consensus	consensus	NN
cord-004862-yv76yvy5	312	45	DNA	dna	NN
cord-004862-yv76yvy5	312	46	sequence	sequence	NN
cord-004862-yv76yvy5	312	47	Determination	determination	NN
cord-004862-yv76yvy5	312	48	of	of	IN
cord-004862-yv76yvy5	312	49	a	a	DT
cord-004862-yv76yvy5	312	50	functional	functional	JJ
cord-004862-yv76yvy5	312	51	ancestral	ancestral	JJ
cord-004862-yv76yvy5	312	52	sequence	sequence	NN
cord-004862-yv76yvy5	312	53	and	and	CC
cord-004862-yv76yvy5	312	54	definition	definition	NN
cord-004862-yv76yvy5	312	55	of	of	IN
cord-004862-yv76yvy5	312	56	the	the	DT
cord-004862-yv76yvy5	312	57	5	5	CD
cord-004862-yv76yvy5	312	58	'	'	NN
cord-004862-yv76yvy5	312	59	end	end	NN
cord-004862-yv76yvy5	312	60	of	of	IN
cord-004862-yv76yvy5	312	61	A	a	DT
cord-004862-yv76yvy5	312	62	-	-	HYPH
cord-004862-yv76yvy5	312	63	type	type	NN
cord-004862-yv76yvy5	312	64	mouse	mouse	NN
cord-004862-yv76yvy5	312	65	LI	LI	NNP
cord-004862-yv76yvy5	312	66	elements	element	NNS
cord-004862-yv76yvy5	312	67	The	the	DT
cord-004862-yv76yvy5	312	68	nucleotide	nucleotide	JJ
cord-004862-yv76yvy5	312	69	sequence	sequence	NN
cord-004862-yv76yvy5	312	70	of	of	IN
cord-004862-yv76yvy5	312	71	the	the	DT
cord-004862-yv76yvy5	312	72	BALB	BALB	NNP
cord-004862-yv76yvy5	312	73	/	/	SYM
cord-004862-yv76yvy5	312	74	C	C	NNP
cord-004862-yv76yvy5	312	75	mouse	mouse	NNP
cord-004862-yv76yvy5	312	76	fl	fl	NNP
cord-004862-yv76yvy5	312	77	-	-	HYPH
cord-004862-yv76yvy5	312	78	globin	globin	NN
cord-004862-yv76yvy5	312	79	complex	complex	NN
cord-004862-yv76yvy5	313	1	The	the	DT
cord-004862-yv76yvy5	313	2	organization	organization	NN
cord-004862-yv76yvy5	313	3	of	of	IN
cord-004862-yv76yvy5	313	4	repetitive	repetitive	JJ
cord-004862-yv76yvy5	313	5	sequences	sequence	NNS
cord-004862-yv76yvy5	313	6	in	in	IN
cord-004862-yv76yvy5	313	7	a	a	DT
cord-004862-yv76yvy5	313	8	cluster	cluster	NN
cord-004862-yv76yvy5	313	9	of	of	IN
cord-004862-yv76yvy5	313	10	rabbit	rabbit	NN
cord-004862-yv76yvy5	313	11	fl	fl	NNP
cord-004862-yv76yvy5	313	12	-	-	HYPH
cord-004862-yv76yvy5	313	13	like	like	JJ
cord-004862-yv76yvy5	313	14	globin	globin	NN
cord-004862-yv76yvy5	313	15	genes	gene	NNS
cord-004862-yv76yvy5	313	16	SINEs	sine	NNS
cord-004862-yv76yvy5	313	17	and	and	CC
cord-004862-yv76yvy5	313	18	LINEs	line	NNS
cord-004862-yv76yvy5	313	19	:	:	:
cord-004862-yv76yvy5	313	20	highly	highly	RB
cord-004862-yv76yvy5	313	21	repeated	repeat	VBN
cord-004862-yv76yvy5	313	22	short	short	JJ
cord-004862-yv76yvy5	313	23	and	and	CC
cord-004862-yv76yvy5	313	24	long	long	JJ
cord-004862-yv76yvy5	313	25	interspersed	interspersed	JJ
cord-004862-yv76yvy5	313	26	sequences	sequence	NNS
cord-004862-yv76yvy5	313	27	in	in	IN
cord-004862-yv76yvy5	313	28	mammalian	mammalian	JJ
cord-004862-yv76yvy5	313	29	genomes	genome	NNS
cord-004862-yv76yvy5	313	30	Making	make	VBG
cord-004862-yv76yvy5	313	31	sense	sense	NN
cord-004862-yv76yvy5	313	32	out	out	IN
cord-004862-yv76yvy5	313	33	of	of	IN
cord-004862-yv76yvy5	313	34	LINEs	line	NNS
cord-004862-yv76yvy5	313	35	:	:	:
cord-004862-yv76yvy5	313	36	long	long	RB
cord-004862-yv76yvy5	313	37	interspersed	intersperse	VBN
cord-004862-yv76yvy5	313	38	repeat	repeat	NN
cord-004862-yv76yvy5	313	39	sequences	sequence	NNS
cord-004862-yv76yvy5	313	40	in	in	IN
cord-004862-yv76yvy5	313	41	mammalian	mammalian	JJ
cord-004862-yv76yvy5	313	42	genomes	genome	NNS
cord-004862-yv76yvy5	313	43	Expression	expression	NN
cord-004862-yv76yvy5	313	44	of	of	IN
cord-004862-yv76yvy5	313	45	a	a	DT
cord-004862-yv76yvy5	313	46	cytoplasmic	cytoplasmic	JJ
cord-004862-yv76yvy5	313	47	LINE-1	LINE-1	NNP
cord-004862-yv76yvy5	313	48	transcript	transcript	NN
cord-004862-yv76yvy5	313	49	is	be	VBZ
cord-004862-yv76yvy5	313	50	regulated	regulate	VBN
cord-004862-yv76yvy5	313	51	in	in	IN
cord-004862-yv76yvy5	313	52	a	a	DT
cord-004862-yv76yvy5	313	53	human	human	JJ
cord-004862-yv76yvy5	313	54	teratocarcinoma	teratocarcinoma	NNP
cord-004862-yv76yvy5	313	55	cell	cell	NN
cord-004862-yv76yvy5	313	56	line	line	NN
cord-004862-yv76yvy5	313	57	Rat	Rat	NNP
cord-004862-yv76yvy5	313	58	LINEI	LINEI	NNP
cord-004862-yv76yvy5	313	59	:	:	:
cord-004862-yv76yvy5	313	60	the	the	DT
cord-004862-yv76yvy5	313	61	origin	origin	NN
cord-004862-yv76yvy5	313	62	and	and	CC
cord-004862-yv76yvy5	313	63	evolution	evolution	NN
cord-004862-yv76yvy5	313	64	of	of	IN
cord-004862-yv76yvy5	313	65	a	a	DT
cord-004862-yv76yvy5	313	66	family	family	NN
cord-004862-yv76yvy5	313	67	of	of	IN
cord-004862-yv76yvy5	313	68	long	long	RB
cord-004862-yv76yvy5	313	69	interspersed	intersperse	VBN
cord-004862-yv76yvy5	313	70	middle	middle	JJ
cord-004862-yv76yvy5	313	71	repetitive	repetitive	JJ
cord-004862-yv76yvy5	313	72	DNA	dna	NN
cord-004862-yv76yvy5	313	73	elements	element	NNS
cord-004862-yv76yvy5	313	74	Detection	detection	NN
cord-004862-yv76yvy5	313	75	of	of	IN
cord-004862-yv76yvy5	313	76	specific	specific	JJ
cord-004862-yv76yvy5	313	77	sequences	sequence	NNS
cord-004862-yv76yvy5	313	78	among	among	IN
cord-004862-yv76yvy5	313	79	DNA	dna	NN
cord-004862-yv76yvy5	313	80	fragments	fragment	NNS
cord-004862-yv76yvy5	313	81	separated	separate	VBN
cord-004862-yv76yvy5	313	82	by	by	IN
cord-004862-yv76yvy5	313	83	gel	gel	NN
cord-004862-yv76yvy5	313	84	electrophoresis	electrophoresis	NN
cord-004862-yv76yvy5	314	1	The	the	DT
cord-004862-yv76yvy5	314	2	L1Md	L1Md	NNP
cord-004862-yv76yvy5	314	3	long	long	RB
cord-004862-yv76yvy5	314	4	interspersed	intersperse	VBN
cord-004862-yv76yvy5	314	5	repeat	repeat	VBP
cord-004862-yv76yvy5	314	6	family	family	NN
cord-004862-yv76yvy5	314	7	in	in	IN
cord-004862-yv76yvy5	314	8	the	the	DT
cord-004862-yv76yvy5	314	9	mouse	mouse	NN
cord-004862-yv76yvy5	314	10	:	:	:
cord-004862-yv76yvy5	314	11	almost	almost	RB
cord-004862-yv76yvy5	314	12	all	all	DT
cord-004862-yv76yvy5	314	13	examples	example	NNS
cord-004862-yv76yvy5	314	14	are	be	VBP
cord-004862-yv76yvy5	314	15	truncated	truncate	VBN
cord-004862-yv76yvy5	314	16	at	at	IN
cord-004862-yv76yvy5	314	17	one	one	CD
cord-004862-yv76yvy5	314	18	end	end	NN
cord-004862-yv76yvy5	314	19	roposons	roposon	NNS
cord-004862-yv76yvy5	314	20	:	:	:
cord-004862-yv76yvy5	314	21	genes	gene	NNS
cord-004862-yv76yvy5	314	22	,	,	,
cord-004862-yv76yvy5	314	23	pseudogenes	pseudogene	NNS
cord-004862-yv76yvy5	314	24	,	,	,
cord-004862-yv76yvy5	314	25	and	and	CC
cord-004862-yv76yvy5	314	26	transposable	transposable	JJ
cord-004862-yv76yvy5	314	27	elements	element	NNS
cord-004862-yv76yvy5	314	28	generated	generate	VBN
cord-004862-yv76yvy5	314	29	by	by	IN
cord-004862-yv76yvy5	314	30	the	the	DT
cord-004862-yv76yvy5	314	31	reverse	reverse	JJ
cord-004862-yv76yvy5	314	32	flow	flow	NN
cord-004862-yv76yvy5	314	33	of	of	IN
cord-004862-yv76yvy5	314	34	genetic	genetic	JJ
cord-004862-yv76yvy5	314	35	information	information	NN
cord-004862-yv76yvy5	314	36	Rapid	rapid	JJ
cord-004862-yv76yvy5	314	37	similarity	similarity	NN
cord-004862-yv76yvy5	314	38	searches	search	NNS
cord-004862-yv76yvy5	314	39	of	of	IN
cord-004862-yv76yvy5	314	40	nucleic	nucleic	JJ
cord-004862-yv76yvy5	314	41	acid	acid	NN
cord-004862-yv76yvy5	314	42	and	and	CC
cord-004862-yv76yvy5	314	43	protein	protein	NN
cord-004862-yv76yvy5	314	44	data	datum	NNS
cord-004862-yv76yvy5	314	45	banks	bank	NNS
cord-004862-yv76yvy5	315	1	The	the	DT
cord-004862-yv76yvy5	315	2	site	site	NN
cord-004862-yv76yvy5	315	3	-	-	HYPH
cord-004862-yv76yvy5	315	4	specific	specific	JJ
cord-004862-yv76yvy5	315	5	ribosomal	ribosomal	JJ
cord-004862-yv76yvy5	315	6	DNAinsertion	dnainsertion	NN
cord-004862-yv76yvy5	315	7	element	element	NN
cord-004862-yv76yvy5	315	8	RIBm	RIBm	NNP
cord-004862-yv76yvy5	315	9	belongs	belong	VBZ
cord-004862-yv76yvy5	315	10	to	to	IN
cord-004862-yv76yvy5	315	11	a	a	DT
cord-004862-yv76yvy5	315	12	class	class	NN
cord-004862-yv76yvy5	315	13	of	of	IN
cord-004862-yv76yvy5	315	14	non	non	JJ
cord-004862-yv76yvy5	315	15	-	-	JJ
cord-004862-yv76yvy5	315	16	long	long	JJ
cord-004862-yv76yvy5	315	17	-	-	HYPH
cord-004862-yv76yvy5	315	18	terminal	terminal	NN
cord-004862-yv76yvy5	315	19	-	-	HYPH
cord-004862-yv76yvy5	315	20	repeat	repeat	NN
cord-004862-yv76yvy5	315	21	retrotransposons	retrotransposon	NNS
cord-004862-yv76yvy5	315	22	Analysis	analysis	NN
cord-004862-yv76yvy5	315	23	of	of	IN
cord-004862-yv76yvy5	315	24	large	large	JJ
cord-004862-yv76yvy5	315	25	nucleic	nucleic	JJ
cord-004862-yv76yvy5	315	26	acid	acid	NN
cord-004862-yv76yvy5	315	27	dot	dot	NN
cord-004862-yv76yvy5	315	28	matrices	matrix	NNS
cord-004862-yv76yvy5	315	29	on	on	IN
cord-004862-yv76yvy5	315	30	small	small	JJ
cord-004862-yv76yvy5	315	31	computers	computer	NNS
cord-004862-yv76yvy5	315	32	Acknowledgments	acknowledgment	NNS
cord-004862-yv76yvy5	315	33	.	.	.
cord-004862-yv76yvy5	316	1	We	-PRON-	PRP
cord-004862-yv76yvy5	316	2	 	 	_SP