id sid tid token lemma pos cord-279343-ybncwweg 1 1 key key NN cord-279343-ybncwweg 1 2 : : : cord-279343-ybncwweg 2 1 cord-279343-ybncwweg cord-279343-ybncwweg NNP cord-279343-ybncwweg 3 1 authors author NNS cord-279343-ybncwweg 3 2 : : : cord-279343-ybncwweg 3 3 Snyder Snyder NNP cord-279343-ybncwweg 3 4 , , , cord-279343-ybncwweg 3 5 Greg Greg NNP cord-279343-ybncwweg 3 6 A. A. NNP cord-279343-ybncwweg 3 7 ; ; : cord-279343-ybncwweg 3 8 Colonna Colonna NNP cord-279343-ybncwweg 3 9 , , , cord-279343-ybncwweg 3 10 Marco Marco NNP cord-279343-ybncwweg 3 11 ; ; : cord-279343-ybncwweg 3 12 Sun Sun NNP cord-279343-ybncwweg 3 13 , , , cord-279343-ybncwweg 3 14 Peter Peter NNP cord-279343-ybncwweg 3 15 D. D. NNP cord-279343-ybncwweg 3 16 title title NN cord-279343-ybncwweg 3 17 : : : cord-279343-ybncwweg 3 18 The the DT cord-279343-ybncwweg 3 19 Structure Structure NNP cord-279343-ybncwweg 3 20 of of IN cord-279343-ybncwweg 3 21 DC DC NNP cord-279343-ybncwweg 3 22 - - HYPH cord-279343-ybncwweg 3 23 SIGNR SIGNR NNP cord-279343-ybncwweg 3 24 with with IN cord-279343-ybncwweg 3 25 a a DT cord-279343-ybncwweg 3 26 Portion portion NN cord-279343-ybncwweg 3 27 of of IN cord-279343-ybncwweg 3 28 its -PRON- PRP$ cord-279343-ybncwweg 3 29 Repeat repeat NN cord-279343-ybncwweg 3 30 Domain Domain NNP cord-279343-ybncwweg 3 31 Lends lend VBZ cord-279343-ybncwweg 3 32 Insights insight NNS cord-279343-ybncwweg 3 33 to to IN cord-279343-ybncwweg 3 34 Modeling Modeling NNP cord-279343-ybncwweg 3 35 of of IN cord-279343-ybncwweg 3 36 the the DT cord-279343-ybncwweg 3 37 Receptor Receptor NNP cord-279343-ybncwweg 3 38 Tetramer Tetramer NNP cord-279343-ybncwweg 3 39 date date NN cord-279343-ybncwweg 3 40 : : : cord-279343-ybncwweg 4 1 2005 2005 CD cord-279343-ybncwweg 4 2 - - HYPH cord-279343-ybncwweg 4 3 04 04 CD cord-279343-ybncwweg 4 4 - - SYM cord-279343-ybncwweg 4 5 15 15 CD cord-279343-ybncwweg 4 6 journal journal NN cord-279343-ybncwweg 4 7 : : : cord-279343-ybncwweg 4 8 Journal Journal NNP cord-279343-ybncwweg 4 9 of of IN cord-279343-ybncwweg 4 10 Molecular Molecular NNP cord-279343-ybncwweg 4 11 Biology Biology NNP cord-279343-ybncwweg 4 12 DOI DOI NNP cord-279343-ybncwweg 4 13 : : : cord-279343-ybncwweg 4 14 10.1016 10.1016 CD cord-279343-ybncwweg 4 15 / / SYM cord-279343-ybncwweg 4 16 j.jmb.2005.01.063 j.jmb.2005.01.063 NN cord-279343-ybncwweg 4 17 sha sha NNP cord-279343-ybncwweg 4 18 : : : cord-279343-ybncwweg 5 1 dcb38c5a45b930e30d1ea7da83975a63fd0b5cb3 dcb38c5a45b930e30d1ea7da83975a63fd0b5cb3 NNP cord-279343-ybncwweg 5 2 doc_id doc_id CD cord-279343-ybncwweg 5 3 : : : cord-279343-ybncwweg 6 1 279343 279343 CD cord-279343-ybncwweg 6 2 cord_uid cord_uid NNS cord-279343-ybncwweg 6 3 : : : cord-279343-ybncwweg 7 1 ybncwweg ybncwweg NNP cord-279343-ybncwweg 7 2 The the DT cord-279343-ybncwweg 7 3 dendritic dendritic JJ cord-279343-ybncwweg 7 4 cell cell NN cord-279343-ybncwweg 7 5 - - HYPH cord-279343-ybncwweg 7 6 specific specific JJ cord-279343-ybncwweg 7 7 ICAM-3 icam-3 JJ cord-279343-ybncwweg 7 8 non non JJ cord-279343-ybncwweg 7 9 - - JJ cord-279343-ybncwweg 7 10 integrin integrin JJ cord-279343-ybncwweg 7 11 ( ( -LRB- cord-279343-ybncwweg 7 12 DC DC NNP cord-279343-ybncwweg 7 13 - - HYPH cord-279343-ybncwweg 7 14 SIGN SIGN NNP cord-279343-ybncwweg 7 15 ) ) -RRB- cord-279343-ybncwweg 7 16 and and CC cord-279343-ybncwweg 8 1 its -PRON- PRP$ cord-279343-ybncwweg 8 2 close close JJ cord-279343-ybncwweg 8 3 relative relative JJ cord-279343-ybncwweg 8 4 DC DC NNP cord-279343-ybncwweg 8 5 - - HYPH cord-279343-ybncwweg 8 6 SIGNR SIGNR NNP cord-279343-ybncwweg 8 7 recognize recognize VBP cord-279343-ybncwweg 8 8 various various JJ cord-279343-ybncwweg 8 9 glycoproteins glycoprotein NNS cord-279343-ybncwweg 8 10 , , , cord-279343-ybncwweg 8 11 both both CC cord-279343-ybncwweg 8 12 pathogenic pathogenic JJ cord-279343-ybncwweg 8 13 and and CC cord-279343-ybncwweg 8 14 cellular cellular JJ cord-279343-ybncwweg 8 15 , , , cord-279343-ybncwweg 8 16 through through IN cord-279343-ybncwweg 8 17 the the DT cord-279343-ybncwweg 8 18 receptor receptor NN cord-279343-ybncwweg 8 19 lectin lectin NN cord-279343-ybncwweg 8 20 domain domain NN cord-279343-ybncwweg 8 21 - - HYPH cord-279343-ybncwweg 8 22 mediated mediate VBN cord-279343-ybncwweg 8 23 carbohydrate carbohydrate NN cord-279343-ybncwweg 8 24 recognition recognition NN cord-279343-ybncwweg 8 25 . . . cord-279343-ybncwweg 9 1 While while IN cord-279343-ybncwweg 9 2 the the DT cord-279343-ybncwweg 9 3 carbohydrate carbohydrate NN cord-279343-ybncwweg 9 4 - - HYPH cord-279343-ybncwweg 9 5 recognition recognition NN cord-279343-ybncwweg 9 6 domains domain NNS cord-279343-ybncwweg 9 7 ( ( -LRB- cord-279343-ybncwweg 9 8 CRD CRD NNP cord-279343-ybncwweg 9 9 ) ) -RRB- cord-279343-ybncwweg 9 10 exist exist VBP cord-279343-ybncwweg 9 11 as as IN cord-279343-ybncwweg 9 12 monomers monomer NNS cord-279343-ybncwweg 9 13 and and CC cord-279343-ybncwweg 9 14 bind bind VB cord-279343-ybncwweg 9 15 individual individual JJ cord-279343-ybncwweg 9 16 carbohydrates carbohydrate NNS cord-279343-ybncwweg 9 17 with with IN cord-279343-ybncwweg 9 18 low low JJ cord-279343-ybncwweg 9 19 affinity affinity NN cord-279343-ybncwweg 9 20 and and CC cord-279343-ybncwweg 9 21 are be VBP cord-279343-ybncwweg 9 22 permissive permissive JJ cord-279343-ybncwweg 9 23 in in IN cord-279343-ybncwweg 9 24 nature nature NN cord-279343-ybncwweg 9 25 , , , cord-279343-ybncwweg 9 26 the the DT cord-279343-ybncwweg 9 27 full full JJ cord-279343-ybncwweg 9 28 - - HYPH cord-279343-ybncwweg 9 29 length length NN cord-279343-ybncwweg 9 30 receptors receptor NNS cord-279343-ybncwweg 9 31 form form VBP cord-279343-ybncwweg 9 32 tetramers tetramer NNS cord-279343-ybncwweg 9 33 through through IN cord-279343-ybncwweg 9 34 their -PRON- PRP$ cord-279343-ybncwweg 9 35 repeat repeat NN cord-279343-ybncwweg 9 36 domain domain NN cord-279343-ybncwweg 9 37 and and CC cord-279343-ybncwweg 9 38 recognize recognize VB cord-279343-ybncwweg 9 39 specific specific JJ cord-279343-ybncwweg 9 40 ligands ligand NNS cord-279343-ybncwweg 9 41 with with IN cord-279343-ybncwweg 9 42 high high JJ cord-279343-ybncwweg 9 43 affinity affinity NN cord-279343-ybncwweg 9 44 . . . cord-279343-ybncwweg 10 1 To to TO cord-279343-ybncwweg 10 2 understand understand VB cord-279343-ybncwweg 10 3 the the DT cord-279343-ybncwweg 10 4 tetramer tetramer NN cord-279343-ybncwweg 10 5 - - HYPH cord-279343-ybncwweg 10 6 based base VBN cord-279343-ybncwweg 10 7 ligand ligand NN cord-279343-ybncwweg 10 8 binding bind VBG cord-279343-ybncwweg 10 9 avidity avidity NN cord-279343-ybncwweg 10 10 , , , cord-279343-ybncwweg 10 11 we -PRON- PRP cord-279343-ybncwweg 10 12 determined determine VBD cord-279343-ybncwweg 10 13 the the DT cord-279343-ybncwweg 10 14 crystal crystal NN cord-279343-ybncwweg 10 15 structure structure NN cord-279343-ybncwweg 10 16 of of IN cord-279343-ybncwweg 10 17 DC DC NNP cord-279343-ybncwweg 10 18 - - HYPH cord-279343-ybncwweg 10 19 SIGNR SIGNR NNP cord-279343-ybncwweg 10 20 with with IN cord-279343-ybncwweg 10 21 its -PRON- PRP$ cord-279343-ybncwweg 10 22 last last JJ cord-279343-ybncwweg 10 23 repeat repeat NN cord-279343-ybncwweg 10 24 region region NN cord-279343-ybncwweg 10 25 . . . cord-279343-ybncwweg 11 1 Compared compare VBN cord-279343-ybncwweg 11 2 to to IN cord-279343-ybncwweg 11 3 the the DT cord-279343-ybncwweg 11 4 carbohydrate carbohydrate NN cord-279343-ybncwweg 11 5 - - HYPH cord-279343-ybncwweg 11 6 bound bind VBN cord-279343-ybncwweg 11 7 CRD crd NN cord-279343-ybncwweg 11 8 structure structure NN cord-279343-ybncwweg 11 9 , , , cord-279343-ybncwweg 11 10 the the DT cord-279343-ybncwweg 11 11 structure structure NN cord-279343-ybncwweg 11 12 revealed reveal VBD cord-279343-ybncwweg 11 13 conformational conformational JJ cord-279343-ybncwweg 11 14 changes change NNS cord-279343-ybncwweg 11 15 in in IN cord-279343-ybncwweg 11 16 the the DT cord-279343-ybncwweg 11 17 calcium calcium NN cord-279343-ybncwweg 11 18 and and CC cord-279343-ybncwweg 11 19 carbohydrate carbohydrate NN cord-279343-ybncwweg 11 20 coordination coordination NN cord-279343-ybncwweg 11 21 loops loop NNS cord-279343-ybncwweg 11 22 of of IN cord-279343-ybncwweg 11 23 CRD CRD NNP cord-279343-ybncwweg 11 24 , , , cord-279343-ybncwweg 11 25 an an DT cord-279343-ybncwweg 11 26 additional additional JJ cord-279343-ybncwweg 11 27 disulfide disulfide JJ cord-279343-ybncwweg 11 28 bond bond NN cord-279343-ybncwweg 11 29 between between IN cord-279343-ybncwweg 11 30 the the DT cord-279343-ybncwweg 11 31 N N NNP cord-279343-ybncwweg 11 32 and and CC cord-279343-ybncwweg 11 33 the the DT cord-279343-ybncwweg 11 34 C C NNP cord-279343-ybncwweg 11 35 termini termini NNPS cord-279343-ybncwweg 11 36 of of IN cord-279343-ybncwweg 11 37 the the DT cord-279343-ybncwweg 11 38 CRD crd NN cord-279343-ybncwweg 11 39 , , , cord-279343-ybncwweg 11 40 and and CC cord-279343-ybncwweg 11 41 a a DT cord-279343-ybncwweg 11 42 helical helical JJ cord-279343-ybncwweg 11 43 conformation conformation NN cord-279343-ybncwweg 11 44 for for IN cord-279343-ybncwweg 11 45 the the DT cord-279343-ybncwweg 11 46 last last JJ cord-279343-ybncwweg 11 47 repeat repeat NN cord-279343-ybncwweg 11 48 . . . cord-279343-ybncwweg 12 1 On on IN cord-279343-ybncwweg 12 2 the the DT cord-279343-ybncwweg 12 3 basis basis NN cord-279343-ybncwweg 12 4 of of IN cord-279343-ybncwweg 12 5 the the DT cord-279343-ybncwweg 12 6 current current JJ cord-279343-ybncwweg 12 7 crystal crystal NN cord-279343-ybncwweg 12 8 structure structure NN cord-279343-ybncwweg 12 9 and and CC cord-279343-ybncwweg 12 10 other other JJ cord-279343-ybncwweg 12 11 published publish VBN cord-279343-ybncwweg 12 12 structures structure NNS cord-279343-ybncwweg 12 13 with with IN cord-279343-ybncwweg 12 14 sequence sequence NN cord-279343-ybncwweg 12 15 homology homology NN cord-279343-ybncwweg 12 16 to to IN cord-279343-ybncwweg 12 17 the the DT cord-279343-ybncwweg 12 18 repeat repeat NN cord-279343-ybncwweg 12 19 domain domain NN cord-279343-ybncwweg 12 20 , , , cord-279343-ybncwweg 12 21 we -PRON- PRP cord-279343-ybncwweg 12 22 generated generate VBD cord-279343-ybncwweg 12 23 a a DT cord-279343-ybncwweg 12 24 tetramer tetramer NN cord-279343-ybncwweg 12 25 model model NN cord-279343-ybncwweg 12 26 for for IN cord-279343-ybncwweg 12 27 DC DC NNP cord-279343-ybncwweg 12 28 - - HYPH cord-279343-ybncwweg 12 29 SIGN SIGN NNP cord-279343-ybncwweg 12 30 / / SYM cord-279343-ybncwweg 12 31 R r NN cord-279343-ybncwweg 12 32 using use VBG cord-279343-ybncwweg 12 33 homology homology NN cord-279343-ybncwweg 12 34 modeling modeling NN cord-279343-ybncwweg 12 35 and and CC cord-279343-ybncwweg 12 36 propose propose VB cord-279343-ybncwweg 12 37 a a DT cord-279343-ybncwweg 12 38 ligand ligand NN cord-279343-ybncwweg 12 39 - - HYPH cord-279343-ybncwweg 12 40 recognition recognition NN cord-279343-ybncwweg 12 41 index index NN cord-279343-ybncwweg 12 42 to to TO cord-279343-ybncwweg 12 43 identify identify VB cord-279343-ybncwweg 12 44 potential potential JJ cord-279343-ybncwweg 12 45 receptor receptor NN cord-279343-ybncwweg 12 46 ligands ligand NNS cord-279343-ybncwweg 12 47 . . . cord-279343-ybncwweg 13 1 The the DT cord-279343-ybncwweg 13 2 Structure Structure NNP cord-279343-ybncwweg 13 3 of of IN cord-279343-ybncwweg 13 4 DC DC NNP cord-279343-ybncwweg 13 5 - - HYPH cord-279343-ybncwweg 13 6 SIGNR SIGNR NNP cord-279343-ybncwweg 13 7 with with IN cord-279343-ybncwweg 13 8 a a DT cord-279343-ybncwweg 13 9 Portion portion NN cord-279343-ybncwweg 13 10 of of IN cord-279343-ybncwweg 13 11 its -PRON- PRP$ cord-279343-ybncwweg 13 12 Repeat repeat NN cord-279343-ybncwweg 13 13 Domain Domain NNP cord-279343-ybncwweg 13 14 Lends lend VBZ cord-279343-ybncwweg 13 15 Insights insight NNS cord-279343-ybncwweg 13 16 to to IN cord-279343-ybncwweg 13 17 Modeling Modeling NNP cord-279343-ybncwweg 13 18 of of IN cord-279343-ybncwweg 13 19 the the DT cord-279343-ybncwweg 13 20 Receptor Receptor NNP cord-279343-ybncwweg 13 21 Tetramer Tetramer NNP cord-279343-ybncwweg 13 22 Greg Greg NNP cord-279343-ybncwweg 13 23 A. a. NN cord-279343-ybncwweg 13 24 Snyder Snyder NNP cord-279343-ybncwweg 13 25 1,3 1,3 CD cord-279343-ybncwweg 13 26 , , , cord-279343-ybncwweg 13 27 Marco Marco NNP cord-279343-ybncwweg 13 28 Colonna Colonna NNP cord-279343-ybncwweg 13 29 2 2 CD cord-279343-ybncwweg 13 30 and and CC cord-279343-ybncwweg 13 31 Peter Peter NNP cord-279343-ybncwweg 13 32 D. D. NNP cord-279343-ybncwweg 13 33 Sun Sun NNP cord-279343-ybncwweg 13 34 1 1 CD cord-279343-ybncwweg 14 1 * * NFP cord-279343-ybncwweg 14 2 Introduction Introduction NNP cord-279343-ybncwweg 14 3 The the DT cord-279343-ybncwweg 14 4 dendritic dendritic JJ cord-279343-ybncwweg 14 5 cell cell NN cord-279343-ybncwweg 14 6 - - HYPH cord-279343-ybncwweg 14 7 specific specific JJ cord-279343-ybncwweg 14 8 ICAM-3 icam-3 JJ cord-279343-ybncwweg 14 9 non non JJ cord-279343-ybncwweg 14 10 - - JJ cord-279343-ybncwweg 14 11 integrin integrin JJ cord-279343-ybncwweg 14 12 ( ( -LRB- cord-279343-ybncwweg 14 13 DC DC NNP cord-279343-ybncwweg 14 14 - - HYPH cord-279343-ybncwweg 14 15 SIGN SIGN NNP cord-279343-ybncwweg 14 16 ) ) -RRB- cord-279343-ybncwweg 14 17 and and CC cord-279343-ybncwweg 14 18 its -PRON- PRP$ cord-279343-ybncwweg 14 19 close close JJ cord-279343-ybncwweg 14 20 relative relative JJ cord-279343-ybncwweg 14 21 DC DC NNP cord-279343-ybncwweg 14 22 - - HYPH cord-279343-ybncwweg 14 23 SIGNR SIGNR NNP cord-279343-ybncwweg 14 24 are be VBP cord-279343-ybncwweg 14 25 members member NNS cord-279343-ybncwweg 14 26 of of IN cord-279343-ybncwweg 14 27 the the DT cord-279343-ybncwweg 14 28 C c NN cord-279343-ybncwweg 14 29 - - HYPH cord-279343-ybncwweg 14 30 type type NN cord-279343-ybncwweg 14 31 lectin lectin NN cord-279343-ybncwweg 14 32 family family NN cord-279343-ybncwweg 14 33 . . . cord-279343-ybncwweg 15 1 Originally originally RB cord-279343-ybncwweg 15 2 discovered discover VBN cord-279343-ybncwweg 15 3 as as IN cord-279343-ybncwweg 15 4 a a DT cord-279343-ybncwweg 15 5 human human JJ cord-279343-ybncwweg 15 6 immunodeficiency immunodeficiency NN cord-279343-ybncwweg 15 7 virus virus NN cord-279343-ybncwweg 15 8 ( ( -LRB- cord-279343-ybncwweg 15 9 HIV)-binding hiv)-binde VBG cord-279343-ybncwweg 15 10 protein protein NN cord-279343-ybncwweg 15 11 , , , cord-279343-ybncwweg 15 12 DC DC NNP cord-279343-ybncwweg 15 13 - - HYPH cord-279343-ybncwweg 15 14 SIGN SIGN NNP cord-279343-ybncwweg 15 15 has have VBZ cord-279343-ybncwweg 15 16 been be VBN cord-279343-ybncwweg 15 17 shown show VBN cord-279343-ybncwweg 15 18 to to TO cord-279343-ybncwweg 15 19 bind bind VB cord-279343-ybncwweg 15 20 carbohydrates carbohydrate NNS cord-279343-ybncwweg 15 21 on on IN cord-279343-ybncwweg 15 22 various various JJ cord-279343-ybncwweg 15 23 pathogens pathogen NNS cord-279343-ybncwweg 15 24 , , , cord-279343-ybncwweg 15 25 including include VBG cord-279343-ybncwweg 15 26 Ebola Ebola NNP cord-279343-ybncwweg 15 27 , , , cord-279343-ybncwweg 15 28 Mycobacterium Mycobacterium NNP cord-279343-ybncwweg 15 29 tuberculosis tuberculosis NN cord-279343-ybncwweg 15 30 , , , cord-279343-ybncwweg 15 31 hepatitis hepatitis NN cord-279343-ybncwweg 15 32 C C NNP cord-279343-ybncwweg 15 33 virus virus NN cord-279343-ybncwweg 15 34 and and CC cord-279343-ybncwweg 15 35 cytomegalovirus cytomegalovirus NN cord-279343-ybncwweg 15 36 . . . cord-279343-ybncwweg 16 1 [ [ -LRB- cord-279343-ybncwweg 16 2 1 1 CD cord-279343-ybncwweg 16 3 ] ] -RRB- cord-279343-ybncwweg 16 4 [ [ -LRB- cord-279343-ybncwweg 16 5 2 2 CD cord-279343-ybncwweg 16 6 ] ] -RRB- cord-279343-ybncwweg 16 7 [ [ -LRB- cord-279343-ybncwweg 16 8 3 3 CD cord-279343-ybncwweg 16 9 ] ] -RRB- cord-279343-ybncwweg 16 10 [ [ -LRB- cord-279343-ybncwweg 16 11 4 4 CD cord-279343-ybncwweg 16 12 ] ] -RRB- cord-279343-ybncwweg 16 13 [ [ -LRB- cord-279343-ybncwweg 16 14 5 5 CD cord-279343-ybncwweg 16 15 ] ] -RRB- cord-279343-ybncwweg 16 16 [ [ -LRB- cord-279343-ybncwweg 16 17 6 6 CD cord-279343-ybncwweg 16 18 ] ] -RRB- cord-279343-ybncwweg 16 19 [ [ -LRB- cord-279343-ybncwweg 16 20 7 7 CD cord-279343-ybncwweg 16 21 ] ] -RRB- cord-279343-ybncwweg 17 1 [ [ -LRB- cord-279343-ybncwweg 17 2 8 8 CD cord-279343-ybncwweg 17 3 ] ] -RRB- cord-279343-ybncwweg 17 4 [ [ -LRB- cord-279343-ybncwweg 17 5 9 9 CD cord-279343-ybncwweg 17 6 ] ] -RRB- cord-279343-ybncwweg 17 7 [ [ -LRB- cord-279343-ybncwweg 17 8 10 10 CD cord-279343-ybncwweg 17 9 ] ] -RRB- cord-279343-ybncwweg 17 10 [ [ -LRB- cord-279343-ybncwweg 17 11 11 11 CD cord-279343-ybncwweg 17 12 ] ] -RRB- cord-279343-ybncwweg 18 1 In in IN cord-279343-ybncwweg 18 2 the the DT cord-279343-ybncwweg 18 3 case case NN cord-279343-ybncwweg 18 4 of of IN cord-279343-ybncwweg 18 5 HIV-1 HIV-1 NNP cord-279343-ybncwweg 18 6 infection infection NN cord-279343-ybncwweg 18 7 , , , cord-279343-ybncwweg 18 8 DC DC NNP cord-279343-ybncwweg 18 9 - - HYPH cord-279343-ybncwweg 18 10 SIGN SIGN NNP cord-279343-ybncwweg 18 11 and and CC cord-279343-ybncwweg 18 12 DC DC NNP cord-279343-ybncwweg 18 13 - - HYPH cord-279343-ybncwweg 18 14 SIGNR SIGNR NNP cord-279343-ybncwweg 18 15 ( ( -LRB- cord-279343-ybncwweg 18 16 together together RB cord-279343-ybncwweg 18 17 referred refer VBN cord-279343-ybncwweg 18 18 to to IN cord-279343-ybncwweg 18 19 as as IN cord-279343-ybncwweg 18 20 DC DC NNP cord-279343-ybncwweg 18 21 - - HYPH cord-279343-ybncwweg 18 22 SIGN sign NN cord-279343-ybncwweg 18 23 / / SYM cord-279343-ybncwweg 18 24 R r NN cord-279343-ybncwweg 18 25 ) ) -RRB- cord-279343-ybncwweg 18 26 have have VBP cord-279343-ybncwweg 18 27 been be VBN cord-279343-ybncwweg 18 28 proposed propose VBN cord-279343-ybncwweg 18 29 to to TO cord-279343-ybncwweg 18 30 facilitate facilitate VB cord-279343-ybncwweg 18 31 the the DT cord-279343-ybncwweg 18 32 viral viral JJ cord-279343-ybncwweg 18 33 infection infection NN cord-279343-ybncwweg 18 34 of of IN cord-279343-ybncwweg 18 35 T t NN cord-279343-ybncwweg 18 36 - - HYPH cord-279343-ybncwweg 18 37 cells cell NNS cord-279343-ybncwweg 18 38 in in IN cord-279343-ybncwweg 18 39 trans trans NNP cord-279343-ybncwweg 18 40 through through IN cord-279343-ybncwweg 18 41 binding bind VBG cord-279343-ybncwweg 18 42 with with IN cord-279343-ybncwweg 18 43 HIV HIV NNP cord-279343-ybncwweg 18 44 gp120 gp120 NNP cord-279343-ybncwweg 18 45 . . . cord-279343-ybncwweg 19 1 5 5 CD cord-279343-ybncwweg 19 2 , , , cord-279343-ybncwweg 19 3 12 12 CD cord-279343-ybncwweg 20 1 However however RB cord-279343-ybncwweg 20 2 , , , cord-279343-ybncwweg 20 3 recent recent JJ cord-279343-ybncwweg 20 4 evidence evidence NN cord-279343-ybncwweg 20 5 suggests suggest VBZ cord-279343-ybncwweg 20 6 that that IN cord-279343-ybncwweg 20 7 DC DC NNP cord-279343-ybncwweg 20 8 - - HYPH cord-279343-ybncwweg 20 9 SIGN SIGN NNP cord-279343-ybncwweg 20 10 / / SYM cord-279343-ybncwweg 20 11 R r NN cord-279343-ybncwweg 20 12 function function NN cord-279343-ybncwweg 20 13 as as IN cord-279343-ybncwweg 20 14 antigen antigen NN cord-279343-ybncwweg 20 15 capturing capture VBG cord-279343-ybncwweg 20 16 receptors receptor NNS cord-279343-ybncwweg 20 17 to to TO cord-279343-ybncwweg 20 18 facilitate facilitate VB cord-279343-ybncwweg 20 19 the the DT cord-279343-ybncwweg 20 20 presentation presentation NN cord-279343-ybncwweg 20 21 of of IN cord-279343-ybncwweg 20 22 HIV-1 HIV-1 NNP cord-279343-ybncwweg 20 23 antigen antigen NN cord-279343-ybncwweg 20 24 by by IN cord-279343-ybncwweg 20 25 dendritic dendritic JJ cord-279343-ybncwweg 20 26 cells cell NNS cord-279343-ybncwweg 20 27 . . . cord-279343-ybncwweg 21 1 13 13 CD cord-279343-ybncwweg 21 2 DC DC NNP cord-279343-ybncwweg 21 3 - - HYPH cord-279343-ybncwweg 21 4 SIGN sign NN cord-279343-ybncwweg 21 5 / / SYM cord-279343-ybncwweg 21 6 R r NN cord-279343-ybncwweg 21 7 each each DT cord-279343-ybncwweg 21 8 consist consist VBP cord-279343-ybncwweg 21 9 of of IN cord-279343-ybncwweg 21 10 four four CD cord-279343-ybncwweg 21 11 domains domain NNS cord-279343-ybncwweg 21 12 : : : cord-279343-ybncwweg 21 13 a a DT cord-279343-ybncwweg 21 14 cytoplasmic cytoplasmic JJ cord-279343-ybncwweg 21 15 domain domain NN cord-279343-ybncwweg 21 16 with with IN cord-279343-ybncwweg 21 17 a a DT cord-279343-ybncwweg 21 18 di di NN cord-279343-ybncwweg 21 19 - - HYPH cord-279343-ybncwweg 21 20 leucine leucine JJ cord-279343-ybncwweg 21 21 motif motif NN cord-279343-ybncwweg 21 22 for for IN cord-279343-ybncwweg 21 23 internalization internalization NN cord-279343-ybncwweg 21 24 , , , cord-279343-ybncwweg 21 25 a a DT cord-279343-ybncwweg 21 26 single single RB cord-279343-ybncwweg 21 27 - - HYPH cord-279343-ybncwweg 21 28 spanning span VBG cord-279343-ybncwweg 21 29 transmembrane transmembrane NN cord-279343-ybncwweg 21 30 region region NN cord-279343-ybncwweg 21 31 , , , cord-279343-ybncwweg 21 32 a a DT cord-279343-ybncwweg 21 33 region region NN cord-279343-ybncwweg 21 34 with with IN cord-279343-ybncwweg 21 35 seven seven CD cord-279343-ybncwweg 21 36 and and CC cord-279343-ybncwweg 21 37 one one CD cord-279343-ybncwweg 21 38 - - HYPH cord-279343-ybncwweg 21 39 half half NN cord-279343-ybncwweg 21 40 23 23 CD cord-279343-ybncwweg 21 41 amino amino NN cord-279343-ybncwweg 21 42 acid acid NN cord-279343-ybncwweg 21 43 residue residue NN cord-279343-ybncwweg 21 44 repeats repeat VBZ cord-279343-ybncwweg 21 45 , , , cord-279343-ybncwweg 21 46 and and CC cord-279343-ybncwweg 21 47 a a DT cord-279343-ybncwweg 21 48 carbohydrate carbohydrate NN cord-279343-ybncwweg 21 49 - - HYPH cord-279343-ybncwweg 21 50 recognition recognition NN cord-279343-ybncwweg 21 51 domain domain NN cord-279343-ybncwweg 21 52 ( ( -LRB- cord-279343-ybncwweg 21 53 CRD CRD NNP cord-279343-ybncwweg 21 54 ) ) -RRB- cord-279343-ybncwweg 21 55 . . . cord-279343-ybncwweg 22 1 DC DC NNP cord-279343-ybncwweg 22 2 - - HYPH cord-279343-ybncwweg 22 3 SIGNR SIGNR NNP cord-279343-ybncwweg 22 4 is be VBZ cord-279343-ybncwweg 22 5 77 77 CD cord-279343-ybncwweg 22 6 % % NN cord-279343-ybncwweg 22 7 identical identical JJ cord-279343-ybncwweg 22 8 with with IN cord-279343-ybncwweg 22 9 DC DC NNP cord-279343-ybncwweg 22 10 - - HYPH cord-279343-ybncwweg 22 11 SIGN sign NN cord-279343-ybncwweg 22 12 in in IN cord-279343-ybncwweg 22 13 amino amino NN cord-279343-ybncwweg 22 14 acid acid NN cord-279343-ybncwweg 22 15 sequence sequence NN cord-279343-ybncwweg 22 16 , , , cord-279343-ybncwweg 22 17 and and CC cord-279343-ybncwweg 22 18 differs differ VBZ cord-279343-ybncwweg 22 19 mainly mainly RB cord-279343-ybncwweg 22 20 in in IN cord-279343-ybncwweg 22 21 tissue tissue NN cord-279343-ybncwweg 22 22 and and CC cord-279343-ybncwweg 22 23 cellular cellular JJ cord-279343-ybncwweg 22 24 expression expression NN cord-279343-ybncwweg 22 25 patterns pattern NNS cord-279343-ybncwweg 22 26 although although IN cord-279343-ybncwweg 22 27 recent recent JJ cord-279343-ybncwweg 22 28 reports report NNS cord-279343-ybncwweg 22 29 indicate indicate VBP cord-279343-ybncwweg 22 30 that that IN cord-279343-ybncwweg 22 31 it -PRON- PRP cord-279343-ybncwweg 22 32 may may MD cord-279343-ybncwweg 22 33 differ differ VB cord-279343-ybncwweg 22 34 in in IN cord-279343-ybncwweg 22 35 binding bind VBG cord-279343-ybncwweg 22 36 and and CC cord-279343-ybncwweg 22 37 processing processing NN cord-279343-ybncwweg 22 38 of of IN cord-279343-ybncwweg 22 39 pathogens pathogen NNS cord-279343-ybncwweg 22 40 . . . cord-279343-ybncwweg 23 1 [ [ -LRB- cord-279343-ybncwweg 23 2 14 14 CD cord-279343-ybncwweg 23 3 ] ] -RRB- cord-279343-ybncwweg 23 4 [ [ -LRB- cord-279343-ybncwweg 23 5 15 15 CD cord-279343-ybncwweg 23 6 ] ] -RRB- cord-279343-ybncwweg 24 1 [ [ -LRB- cord-279343-ybncwweg 24 2 16 16 CD cord-279343-ybncwweg 24 3 ] ] -RRB- cord-279343-ybncwweg 25 1 It -PRON- PRP cord-279343-ybncwweg 25 2 has have VBZ cord-279343-ybncwweg 25 3 been be VBN cord-279343-ybncwweg 25 4 established establish VBN cord-279343-ybncwweg 25 5 that that IN cord-279343-ybncwweg 25 6 DC DC NNP cord-279343-ybncwweg 25 7 - - HYPH cord-279343-ybncwweg 25 8 SIGN SIGN NNP cord-279343-ybncwweg 25 9 / / SYM cord-279343-ybncwweg 25 10 R r NN cord-279343-ybncwweg 25 11 recognize recognize VBP cord-279343-ybncwweg 25 12 specifically specifically RB cord-279343-ybncwweg 25 13 high high JJ cord-279343-ybncwweg 25 14 - - HYPH cord-279343-ybncwweg 25 15 mannose mannose NN cord-279343-ybncwweg 25 16 carbohydrates carbohydrate NNS cord-279343-ybncwweg 25 17 . . . cord-279343-ybncwweg 26 1 17 17 CD cord-279343-ybncwweg 27 1 Previous previous JJ cord-279343-ybncwweg 27 2 structural structural JJ cord-279343-ybncwweg 27 3 studies study NNS cord-279343-ybncwweg 27 4 have have VBP cord-279343-ybncwweg 27 5 shown show VBN cord-279343-ybncwweg 27 6 the the DT cord-279343-ybncwweg 27 7 molecular molecular JJ cord-279343-ybncwweg 27 8 details detail NNS cord-279343-ybncwweg 27 9 of of IN cord-279343-ybncwweg 27 10 this this DT cord-279343-ybncwweg 27 11 interaction interaction NN cord-279343-ybncwweg 27 12 . . . cord-279343-ybncwweg 28 1 18 18 CD cord-279343-ybncwweg 28 2 More more RBR cord-279343-ybncwweg 28 3 recently recently RB cord-279343-ybncwweg 28 4 , , , cord-279343-ybncwweg 28 5 however however RB cord-279343-ybncwweg 28 6 , , , cord-279343-ybncwweg 28 7 DC DC NNP cord-279343-ybncwweg 28 8 - - HYPH cord-279343-ybncwweg 28 9 SIGN SIGN NNP cord-279343-ybncwweg 28 10 / / SYM cord-279343-ybncwweg 28 11 R r NN cord-279343-ybncwweg 28 12 were be VBD cord-279343-ybncwweg 28 13 shown show VBN cord-279343-ybncwweg 28 14 to to TO cord-279343-ybncwweg 28 15 recognize recognize VB cord-279343-ybncwweg 28 16 terminal terminal JJ cord-279343-ybncwweg 28 17 fucose fucose NNS cord-279343-ybncwweg 28 18 and and CC cord-279343-ybncwweg 28 19 galactose galactose NN cord-279343-ybncwweg 28 20 - - HYPH cord-279343-ybncwweg 28 21 containing contain VBG cord-279343-ybncwweg 28 22 carbohydrates carbohydrate NNS cord-279343-ybncwweg 28 23 , , , cord-279343-ybncwweg 28 24 such such JJ cord-279343-ybncwweg 28 25 as as IN cord-279343-ybncwweg 28 26 blood blood NN cord-279343-ybncwweg 28 27 group group NN cord-279343-ybncwweg 28 28 antigens antigen NNS cord-279343-ybncwweg 28 29 B B NNP cord-279343-ybncwweg 28 30 Lewis Lewis NNP cord-279343-ybncwweg 28 31 a a NNP cord-279343-ybncwweg 28 32 , , , cord-279343-ybncwweg 28 33 and and CC cord-279343-ybncwweg 29 1 Lewis Lewis NNP cord-279343-ybncwweg 29 2 x x IN cord-279343-ybncwweg 29 3 structures structure NNS cord-279343-ybncwweg 29 4 in in IN cord-279343-ybncwweg 29 5 addition addition NN cord-279343-ybncwweg 29 6 to to IN cord-279343-ybncwweg 29 7 mannose mannose NN cord-279343-ybncwweg 29 8 . . . cord-279343-ybncwweg 29 9 18 18 CD cord-279343-ybncwweg 29 10 , , , cord-279343-ybncwweg 29 11 19 19 CD cord-279343-ybncwweg 30 1 While while IN cord-279343-ybncwweg 30 2 recognition recognition NN cord-279343-ybncwweg 30 3 between between IN cord-279343-ybncwweg 30 4 various various JJ cord-279343-ybncwweg 30 5 carbohydrate carbohydrate NN cord-279343-ybncwweg 30 6 substructures substructure NNS cord-279343-ybncwweg 30 7 gives give VBZ cord-279343-ybncwweg 30 8 insight insight NN cord-279343-ybncwweg 30 9 into into IN cord-279343-ybncwweg 30 10 how how WRB cord-279343-ybncwweg 30 11 various various JJ cord-279343-ybncwweg 30 12 carbohydrate carbohydrate NN cord-279343-ybncwweg 30 13 model model NN cord-279343-ybncwweg 30 14 compounds compound NNS cord-279343-ybncwweg 30 15 are be VBP cord-279343-ybncwweg 30 16 recognized recognize VBN cord-279343-ybncwweg 30 17 by by IN cord-279343-ybncwweg 30 18 the the DT cord-279343-ybncwweg 30 19 CRD crd NN cord-279343-ybncwweg 30 20 of of IN cord-279343-ybncwweg 30 21 the the DT cord-279343-ybncwweg 30 22 receptor receptor NN cord-279343-ybncwweg 30 23 , , , cord-279343-ybncwweg 30 24 the the DT cord-279343-ybncwweg 30 25 overall overall JJ cord-279343-ybncwweg 30 26 receptor receptor NN cord-279343-ybncwweg 30 27 binding bind VBG cord-279343-ybncwweg 30 28 affinity affinity NN cord-279343-ybncwweg 30 29 appears appear VBZ cord-279343-ybncwweg 30 30 to to TO cord-279343-ybncwweg 30 31 depend depend VB cord-279343-ybncwweg 30 32 on on IN cord-279343-ybncwweg 30 33 the the DT cord-279343-ybncwweg 30 34 0022 0022 CD cord-279343-ybncwweg 30 35 E e NN cord-279343-ybncwweg 30 36 - - NN cord-279343-ybncwweg 30 37 mail mail JJ cord-279343-ybncwweg 30 38 address address NN cord-279343-ybncwweg 30 39 of of IN cord-279343-ybncwweg 30 40 the the DT cord-279343-ybncwweg 30 41 corresponding correspond VBG cord-279343-ybncwweg 30 42 author author NN cord-279343-ybncwweg 30 43 : : : cord-279343-ybncwweg 30 44 psun@nih.gov psun@nih.gov NNP cord-279343-ybncwweg 30 45 multivalent multivalent JJ cord-279343-ybncwweg 30 46 nature nature NN cord-279343-ybncwweg 30 47 of of IN cord-279343-ybncwweg 30 48 the the DT cord-279343-ybncwweg 30 49 ligand ligand NN cord-279343-ybncwweg 30 50 . . . cord-279343-ybncwweg 31 1 20 20 CD cord-279343-ybncwweg 32 1 For for IN cord-279343-ybncwweg 32 2 example example NN cord-279343-ybncwweg 32 3 , , , cord-279343-ybncwweg 32 4 while while IN cord-279343-ybncwweg 32 5 DC DC NNP cord-279343-ybncwweg 32 6 - - HYPH cord-279343-ybncwweg 32 7 SIGN SIGN NNP cord-279343-ybncwweg 32 8 / / SYM cord-279343-ybncwweg 32 9 R r NN cord-279343-ybncwweg 32 10 bind bind NN cord-279343-ybncwweg 32 11 to to TO cord-279343-ybncwweg 32 12 model model VB cord-279343-ybncwweg 32 13 carbohydrate carbohydrate NN cord-279343-ybncwweg 32 14 with with IN cord-279343-ybncwweg 32 15 millimolar millimolar JJ cord-279343-ybncwweg 32 16 affinity affinity NN cord-279343-ybncwweg 32 17 , , , cord-279343-ybncwweg 32 18 the the DT cord-279343-ybncwweg 32 19 receptors receptor NNS cord-279343-ybncwweg 32 20 recognize recognize VBP cord-279343-ybncwweg 32 21 HIV HIV NNP cord-279343-ybncwweg 32 22 gp120 gp120 NNP cord-279343-ybncwweg 32 23 , , , cord-279343-ybncwweg 32 24 which which WDT cord-279343-ybncwweg 32 25 carries carry VBZ cord-279343-ybncwweg 32 26 multiple multiple JJ cord-279343-ybncwweg 32 27 high high RB cord-279343-ybncwweg 32 28 - - HYPH cord-279343-ybncwweg 32 29 mannosebased mannosebased JJ cord-279343-ybncwweg 32 30 , , , cord-279343-ybncwweg 32 31 N N NNP cord-279343-ybncwweg 32 32 - - HYPH cord-279343-ybncwweg 32 33 linked link VBN cord-279343-ybncwweg 32 34 glycosylations glycosylation NNS cord-279343-ybncwweg 32 35 with with IN cord-279343-ybncwweg 32 36 nanomolar nanomolar NNP cord-279343-ybncwweg 32 37 affinity affinity NNP cord-279343-ybncwweg 32 38 . . . cord-279343-ybncwweg 33 1 This this DT cord-279343-ybncwweg 33 2 carbohydrate carbohydrate NN cord-279343-ybncwweg 33 3 valency valency NN cord-279343-ybncwweg 33 4 - - HYPH cord-279343-ybncwweg 33 5 dependent dependent JJ cord-279343-ybncwweg 33 6 avidity avidity NN cord-279343-ybncwweg 33 7 effect effect NN cord-279343-ybncwweg 33 8 was be VBD cord-279343-ybncwweg 33 9 shown show VBN cord-279343-ybncwweg 33 10 to to TO cord-279343-ybncwweg 33 11 be be VB cord-279343-ybncwweg 33 12 the the DT cord-279343-ybncwweg 33 13 result result NN cord-279343-ybncwweg 33 14 of of IN cord-279343-ybncwweg 33 15 DC DC NNP cord-279343-ybncwweg 33 16 - - HYPH cord-279343-ybncwweg 33 17 SIGN SIGN NNP cord-279343-ybncwweg 33 18 / / SYM cord-279343-ybncwweg 33 19 R r NN cord-279343-ybncwweg 33 20 tetramerization tetramerization NN cord-279343-ybncwweg 33 21 through through IN cord-279343-ybncwweg 33 22 its -PRON- PRP$ cord-279343-ybncwweg 33 23 repeat repeat NN cord-279343-ybncwweg 33 24 region region NN cord-279343-ybncwweg 33 25 . . . cord-279343-ybncwweg 34 1 17 17 CD cord-279343-ybncwweg 34 2 , , , cord-279343-ybncwweg 34 3 21 21 CD cord-279343-ybncwweg 35 1 To to TO cord-279343-ybncwweg 35 2 understand understand VB cord-279343-ybncwweg 35 3 the the DT cord-279343-ybncwweg 35 4 nature nature NN cord-279343-ybncwweg 35 5 of of IN cord-279343-ybncwweg 35 6 the the DT cord-279343-ybncwweg 35 7 receptor receptor NN cord-279343-ybncwweg 35 8 - - HYPH cord-279343-ybncwweg 35 9 carbohydrate carbohydrate NN cord-279343-ybncwweg 35 10 interaction interaction NN cord-279343-ybncwweg 35 11 , , , cord-279343-ybncwweg 35 12 we -PRON- PRP cord-279343-ybncwweg 35 13 have have VBP cord-279343-ybncwweg 35 14 determined determine VBN cord-279343-ybncwweg 35 15 the the DT cord-279343-ybncwweg 35 16 crystal crystal JJ cord-279343-ybncwweg 35 17 structure structure NN cord-279343-ybncwweg 35 18 of of IN cord-279343-ybncwweg 35 19 DC DC NNP cord-279343-ybncwweg 35 20 - - HYPH cord-279343-ybncwweg 35 21 SIGNR SIGNR NNP cord-279343-ybncwweg 35 22 with with IN cord-279343-ybncwweg 35 23 a a DT cord-279343-ybncwweg 35 24 portion portion NN cord-279343-ybncwweg 35 25 of of IN cord-279343-ybncwweg 35 26 the the DT cord-279343-ybncwweg 35 27 repeat repeat NN cord-279343-ybncwweg 35 28 domain domain NN cord-279343-ybncwweg 35 29 . . . cord-279343-ybncwweg 36 1 We -PRON- PRP cord-279343-ybncwweg 36 2 propose propose VBP cord-279343-ybncwweg 36 3 a a DT cord-279343-ybncwweg 36 4 tetramer tetramer NN cord-279343-ybncwweg 36 5 model model NN cord-279343-ybncwweg 36 6 for for IN cord-279343-ybncwweg 36 7 the the DT cord-279343-ybncwweg 36 8 intact intact JJ cord-279343-ybncwweg 36 9 extracellular extracellular JJ cord-279343-ybncwweg 36 10 receptor receptor NN cord-279343-ybncwweg 36 11 , , , cord-279343-ybncwweg 36 12 and and CC cord-279343-ybncwweg 36 13 formulate formulate VB cord-279343-ybncwweg 36 14 a a DT cord-279343-ybncwweg 36 15 scheme scheme NN cord-279343-ybncwweg 36 16 to to TO cord-279343-ybncwweg 36 17 predict predict VB cord-279343-ybncwweg 36 18 the the DT cord-279343-ybncwweg 36 19 potential potential JJ cord-279343-ybncwweg 36 20 ligands ligand NNS cord-279343-ybncwweg 36 21 . . . cord-279343-ybncwweg 37 1 The the DT cord-279343-ybncwweg 37 2 crystals crystal NNS cord-279343-ybncwweg 37 3 of of IN cord-279343-ybncwweg 37 4 DC DC NNP cord-279343-ybncwweg 37 5 - - HYPH cord-279343-ybncwweg 37 6 SIGNR SIGNR NNP cord-279343-ybncwweg 37 7 CRD crd NN cord-279343-ybncwweg 37 8 with with IN cord-279343-ybncwweg 37 9 its -PRON- PRP$ cord-279343-ybncwweg 37 10 last last JJ cord-279343-ybncwweg 37 11 repeat repeat NN cord-279343-ybncwweg 37 12 belong belong VBP cord-279343-ybncwweg 37 13 to to IN cord-279343-ybncwweg 37 14 the the DT cord-279343-ybncwweg 37 15 orthorhombic orthorhombic JJ cord-279343-ybncwweg 37 16 space space NN cord-279343-ybncwweg 37 17 group group NN cord-279343-ybncwweg 37 18 P2 P2 NNP cord-279343-ybncwweg 37 19 1 1 CD cord-279343-ybncwweg 37 20 2 2 CD cord-279343-ybncwweg 37 21 1 1 CD cord-279343-ybncwweg 37 22 2 2 CD cord-279343-ybncwweg 37 23 1 1 CD cord-279343-ybncwweg 37 24 . . . cord-279343-ybncwweg 38 1 The the DT cord-279343-ybncwweg 38 2 protein protein NN cord-279343-ybncwweg 38 3 solution solution NN cord-279343-ybncwweg 38 4 was be VBD cord-279343-ybncwweg 38 5 supplemented supplement VBN cord-279343-ybncwweg 38 6 with with IN cord-279343-ybncwweg 38 7 10 10 CD cord-279343-ybncwweg 38 8 mM mm CD cord-279343-ybncwweg 38 9 mannose mannose NN cord-279343-ybncwweg 38 10 and and CC cord-279343-ybncwweg 38 11 5 5 CD cord-279343-ybncwweg 38 12 mM mm CD cord-279343-ybncwweg 38 13 CaCl cacl NN cord-279343-ybncwweg 38 14 2 2 CD cord-279343-ybncwweg 38 15 prior prior RB cord-279343-ybncwweg 38 16 to to IN cord-279343-ybncwweg 38 17 crystallization crystallization NN cord-279343-ybncwweg 38 18 . . . cord-279343-ybncwweg 39 1 Crystals crystal NNS cord-279343-ybncwweg 39 2 were be VBD cord-279343-ybncwweg 39 3 obtained obtain VBN cord-279343-ybncwweg 39 4 under under IN cord-279343-ybncwweg 39 5 several several JJ cord-279343-ybncwweg 39 6 conditions condition NNS cord-279343-ybncwweg 39 7 that that WDT cord-279343-ybncwweg 39 8 include include VBP cord-279343-ybncwweg 39 9 polyethylene polyethylene NN cord-279343-ybncwweg 39 10 glycol glycol NN cord-279343-ybncwweg 39 11 with with IN cord-279343-ybncwweg 39 12 various various JJ cord-279343-ybncwweg 39 13 molecular molecular JJ cord-279343-ybncwweg 39 14 masses masse NNS cord-279343-ybncwweg 39 15 ( ( -LRB- cord-279343-ybncwweg 39 16 2000 2000 CD cord-279343-ybncwweg 39 17 - - SYM cord-279343-ybncwweg 39 18 8000 8000 CD cord-279343-ybncwweg 39 19 Da Da NNP cord-279343-ybncwweg 39 20 ) ) -RRB- cord-279343-ybncwweg 39 21 and and CC cord-279343-ybncwweg 39 22 buffers buffer NNS cord-279343-ybncwweg 39 23 with with IN cord-279343-ybncwweg 39 24 a a DT cord-279343-ybncwweg 39 25 pH ph NN cord-279343-ybncwweg 39 26 between between IN cord-279343-ybncwweg 39 27 6.0 6.0 CD cord-279343-ybncwweg 39 28 and and CC cord-279343-ybncwweg 39 29 8.0 8.0 CD cord-279343-ybncwweg 39 30 . . . cord-279343-ybncwweg 40 1 Crystals crystal NNS cord-279343-ybncwweg 40 2 contained contain VBD cord-279343-ybncwweg 40 3 one one CD cord-279343-ybncwweg 40 4 molecule molecule NN cord-279343-ybncwweg 40 5 per per IN cord-279343-ybncwweg 40 6 asymmetric asymmetric JJ cord-279343-ybncwweg 40 7 unit unit NN cord-279343-ybncwweg 40 8 with with IN cord-279343-ybncwweg 40 9 a a DT cord-279343-ybncwweg 40 10 solvent solvent NN cord-279343-ybncwweg 40 11 content content NN cord-279343-ybncwweg 40 12 of of IN cord-279343-ybncwweg 40 13 32.8 32.8 CD cord-279343-ybncwweg 40 14 % % NN cord-279343-ybncwweg 40 15 ( ( -LRB- cord-279343-ybncwweg 40 16 v v NN cord-279343-ybncwweg 40 17 / / SYM cord-279343-ybncwweg 40 18 v v NN cord-279343-ybncwweg 40 19 ) ) -RRB- cord-279343-ybncwweg 41 1 ( ( -LRB- cord-279343-ybncwweg 41 2 Matthew Matthew NNP cord-279343-ybncwweg 41 3 's 's POS cord-279343-ybncwweg 41 4 coefficient coefficient NN cord-279343-ybncwweg 41 5 of of IN cord-279343-ybncwweg 41 6 1.8 1.8 CD cord-279343-ybncwweg 41 7 ) ) -RRB- cord-279343-ybncwweg 41 8 . . . cord-279343-ybncwweg 42 1 Molecular molecular JJ cord-279343-ybncwweg 42 2 replacement replacement NN cord-279343-ybncwweg 42 3 rotation rotation NN cord-279343-ybncwweg 42 4 and and CC cord-279343-ybncwweg 42 5 translation translation NN cord-279343-ybncwweg 42 6 correlation correlation NN cord-279343-ybncwweg 42 7 coefficients coefficient NNS cord-279343-ybncwweg 42 8 were be VBD cord-279343-ybncwweg 42 9 ranked rank VBN cord-279343-ybncwweg 42 10 and and CC cord-279343-ybncwweg 42 11 yielded yield VBD cord-279343-ybncwweg 42 12 a a DT cord-279343-ybncwweg 42 13 single single JJ cord-279343-ybncwweg 42 14 solution solution NN cord-279343-ybncwweg 42 15 well well RB cord-279343-ybncwweg 42 16 above above IN cord-279343-ybncwweg 42 17 the the DT cord-279343-ybncwweg 42 18 background background NN cord-279343-ybncwweg 42 19 . . . cord-279343-ybncwweg 43 1 The the DT cord-279343-ybncwweg 43 2 initial initial JJ cord-279343-ybncwweg 43 3 phased phase VBN cord-279343-ybncwweg 43 4 map map NN cord-279343-ybncwweg 43 5 had have VBD cord-279343-ybncwweg 43 6 clear clear JJ cord-279343-ybncwweg 43 7 electron electron NN cord-279343-ybncwweg 43 8 density density NN cord-279343-ybncwweg 43 9 for for IN cord-279343-ybncwweg 43 10 both both CC cord-279343-ybncwweg 43 11 the the DT cord-279343-ybncwweg 43 12 main main JJ cord-279343-ybncwweg 43 13 chains chain NNS cord-279343-ybncwweg 43 14 and and CC cord-279343-ybncwweg 43 15 the the DT cord-279343-ybncwweg 43 16 side side NN cord-279343-ybncwweg 43 17 - - HYPH cord-279343-ybncwweg 43 18 chains chain NNS cord-279343-ybncwweg 43 19 . . . cord-279343-ybncwweg 44 1 After after IN cord-279343-ybncwweg 44 2 rebuilding rebuild VBG cord-279343-ybncwweg 44 3 of of IN cord-279343-ybncwweg 44 4 loops loop NNS cord-279343-ybncwweg 44 5 , , , cord-279343-ybncwweg 44 6 the the DT cord-279343-ybncwweg 44 7 electron electron NN cord-279343-ybncwweg 44 8 density density NN cord-279343-ybncwweg 44 9 was be VBD cord-279343-ybncwweg 44 10 continuous continuous JJ cord-279343-ybncwweg 44 11 throughout throughout IN cord-279343-ybncwweg 44 12 the the DT cord-279343-ybncwweg 44 13 structure structure NN cord-279343-ybncwweg 44 14 and and CC cord-279343-ybncwweg 44 15 the the DT cord-279343-ybncwweg 44 16 final final JJ cord-279343-ybncwweg 44 17 structure structure NN cord-279343-ybncwweg 44 18 consists consist VBZ cord-279343-ybncwweg 44 19 of of IN cord-279343-ybncwweg 44 20 residues residue NNS cord-279343-ybncwweg 44 21 260 260 CD cord-279343-ybncwweg 44 22 - - SYM cord-279343-ybncwweg 44 23 398 398 CD cord-279343-ybncwweg 44 24 , , , cord-279343-ybncwweg 44 25 with with IN cord-279343-ybncwweg 44 26 Met282 met282 ADD cord-279343-ybncwweg 44 27 modeled model VBN cord-279343-ybncwweg 44 28 in in IN cord-279343-ybncwweg 44 29 two two CD cord-279343-ybncwweg 44 30 alternative alternative JJ cord-279343-ybncwweg 44 31 conformations conformation NNS cord-279343-ybncwweg 44 32 . . . cord-279343-ybncwweg 45 1 The the DT cord-279343-ybncwweg 45 2 final final JJ cord-279343-ybncwweg 45 3 refined refined JJ cord-279343-ybncwweg 45 4 crystallographic crystallographic JJ cord-279343-ybncwweg 45 5 R r NN cord-279343-ybncwweg 45 6 - - HYPH cord-279343-ybncwweg 45 7 factors factor NNS cord-279343-ybncwweg 45 8 are be VBP cord-279343-ybncwweg 45 9 17.75 17.75 CD cord-279343-ybncwweg 45 10 % % NN cord-279343-ybncwweg 45 11 and and CC cord-279343-ybncwweg 45 12 19.3 19.3 CD cord-279343-ybncwweg 45 13 % % NN cord-279343-ybncwweg 45 14 for for IN cord-279343-ybncwweg 45 15 R r NN cord-279343-ybncwweg 45 16 work work NN cord-279343-ybncwweg 45 17 and and CC cord-279343-ybncwweg 45 18 R r NN cord-279343-ybncwweg 45 19 free free JJ cord-279343-ybncwweg 45 20 , , , cord-279343-ybncwweg 45 21 respectively respectively RB cord-279343-ybncwweg 45 22 , , , cord-279343-ybncwweg 45 23 at at IN cord-279343-ybncwweg 45 24 1.41 1.41 CD cord-279343-ybncwweg 45 25 Å å NN cord-279343-ybncwweg 45 26 resolution resolution NN cord-279343-ybncwweg 45 27 ( ( -LRB- cord-279343-ybncwweg 45 28 Table table NN cord-279343-ybncwweg 45 29 1 1 CD cord-279343-ybncwweg 45 30 ) ) -RRB- cord-279343-ybncwweg 45 31 . . . cord-279343-ybncwweg 46 1 The the DT cord-279343-ybncwweg 46 2 overall overall JJ cord-279343-ybncwweg 46 3 structure structure NN cord-279343-ybncwweg 46 4 is be VBZ cord-279343-ybncwweg 46 5 a a DT cord-279343-ybncwweg 46 6 typical typical JJ cord-279343-ybncwweg 46 7 long long JJ cord-279343-ybncwweg 46 8 - - HYPH cord-279343-ybncwweg 46 9 form form NN cord-279343-ybncwweg 46 10 C c NN cord-279343-ybncwweg 46 11 - - HYPH cord-279343-ybncwweg 46 12 type type NN cord-279343-ybncwweg 46 13 lectin lectin NN cord-279343-ybncwweg 46 14 , , , cord-279343-ybncwweg 46 15 and and CC cord-279343-ybncwweg 46 16 the the DT cord-279343-ybncwweg 46 17 CRD crd NN cord-279343-ybncwweg 46 18 portion portion NN cord-279343-ybncwweg 46 19 superimposes superimpose VBZ cord-279343-ybncwweg 46 20 with with IN cord-279343-ybncwweg 46 21 a a DT cord-279343-ybncwweg 46 22 root root NN cord-279343-ybncwweg 46 23 - - HYPH cord-279343-ybncwweg 46 24 meansquare meansquare NN cord-279343-ybncwweg 46 25 ( ( -LRB- cord-279343-ybncwweg 46 26 r.m.s r.m.s NN cord-279343-ybncwweg 46 27 ) ) -RRB- cord-279343-ybncwweg 46 28 deviation deviation NN cord-279343-ybncwweg 46 29 of of IN cord-279343-ybncwweg 46 30 0.67 0.67 CD cord-279343-ybncwweg 46 31 Å å NN cord-279343-ybncwweg 46 32 ( ( -LRB- cord-279343-ybncwweg 46 33 for for IN cord-279343-ybncwweg 46 34 126 126 CD cord-279343-ybncwweg 46 35 C c NN cord-279343-ybncwweg 46 36 a a DT cord-279343-ybncwweg 46 37 atoms atom NNS cord-279343-ybncwweg 46 38 ) ) -RRB- cord-279343-ybncwweg 46 39 to to IN cord-279343-ybncwweg 46 40 the the DT cord-279343-ybncwweg 46 41 CRD crd NN cord-279343-ybncwweg 46 42 - - HYPH cord-279343-ybncwweg 46 43 only only JJ cord-279343-ybncwweg 46 44 structure structure NN cord-279343-ybncwweg 46 45 ( ( -LRB- cord-279343-ybncwweg 46 46 Figure figure NN cord-279343-ybncwweg 46 47 1(b 1(b CD cord-279343-ybncwweg 46 48 ) ) -RRB- cord-279343-ybncwweg 46 49 ) ) -RRB- cord-279343-ybncwweg 46 50 . . . cord-279343-ybncwweg 47 1 18 18 CD cord-279343-ybncwweg 48 1 Although although IN cord-279343-ybncwweg 48 2 both both DT cord-279343-ybncwweg 48 3 mannose mannose NN cord-279343-ybncwweg 48 4 and and CC cord-279343-ybncwweg 48 5 calcium calcium NN cord-279343-ybncwweg 48 6 were be VBD cord-279343-ybncwweg 48 7 present present JJ cord-279343-ybncwweg 48 8 in in IN cord-279343-ybncwweg 48 9 the the DT cord-279343-ybncwweg 48 10 crystallization crystallization NN cord-279343-ybncwweg 48 11 solution solution NN cord-279343-ybncwweg 48 12 , , , cord-279343-ybncwweg 48 13 only only JJ cord-279343-ybncwweg 48 14 calcium calcium NN cord-279343-ybncwweg 48 15 was be VBD cord-279343-ybncwweg 48 16 observed observe VBN cord-279343-ybncwweg 48 17 bound bind VBN cord-279343-ybncwweg 48 18 in in IN cord-279343-ybncwweg 48 19 the the DT cord-279343-ybncwweg 48 20 canonical canonical JJ cord-279343-ybncwweg 48 21 calcium calcium NN cord-279343-ybncwweg 48 22 binding binding NN cord-279343-ybncwweg 48 23 site site NN cord-279343-ybncwweg 48 24 . . . cord-279343-ybncwweg 49 1 This this DT cord-279343-ybncwweg 49 2 structure structure NN cord-279343-ybncwweg 49 3 contains contain VBZ cord-279343-ybncwweg 49 4 additional additional JJ cord-279343-ybncwweg 49 5 residues residue NNS cord-279343-ybncwweg 49 6 at at IN cord-279343-ybncwweg 49 7 both both CC cord-279343-ybncwweg 49 8 the the DT cord-279343-ybncwweg 49 9 amino amino NN cord-279343-ybncwweg 49 10 and and CC cord-279343-ybncwweg 49 11 carboxyl carboxyl NN cord-279343-ybncwweg 49 12 termini terminus NNS cord-279343-ybncwweg 49 13 including include VBG cord-279343-ybncwweg 49 14 a a DT cord-279343-ybncwweg 49 15 disulfide disulfide JJ cord-279343-ybncwweg 49 16 bond bond NN cord-279343-ybncwweg 49 17 linking link VBG cord-279343-ybncwweg 49 18 the the DT cord-279343-ybncwweg 49 19 two two CD cord-279343-ybncwweg 49 20 termini terminus NNS cord-279343-ybncwweg 49 21 as as RB cord-279343-ybncwweg 49 22 well well RB cord-279343-ybncwweg 49 23 as as IN cord-279343-ybncwweg 49 24 a a DT cord-279343-ybncwweg 49 25 short short JJ cord-279343-ybncwweg 49 26 a a DT cord-279343-ybncwweg 49 27 - - HYPH cord-279343-ybncwweg 49 28 helix helix NN cord-279343-ybncwweg 49 29 at at IN cord-279343-ybncwweg 49 30 the the DT cord-279343-ybncwweg 49 31 beginning beginning NN cord-279343-ybncwweg 49 32 of of IN cord-279343-ybncwweg 49 33 the the DT cord-279343-ybncwweg 49 34 repeat repeat NN cord-279343-ybncwweg 49 35 domain domain NN cord-279343-ybncwweg 49 36 . . . cord-279343-ybncwweg 50 1 Additional additional JJ cord-279343-ybncwweg 50 2 amino amino NN cord-279343-ybncwweg 50 3 acids acid NNS cord-279343-ybncwweg 50 4 were be VBD cord-279343-ybncwweg 50 5 present present JJ cord-279343-ybncwweg 50 6 in in IN cord-279343-ybncwweg 50 7 both both CC cord-279343-ybncwweg 50 8 the the DT cord-279343-ybncwweg 50 9 N N NNP cord-279343-ybncwweg 50 10 and and CC cord-279343-ybncwweg 50 11 C C NNP cord-279343-ybncwweg 50 12 termini terminus NNS cord-279343-ybncwweg 50 13 compared compare VBN cord-279343-ybncwweg 50 14 with with IN cord-279343-ybncwweg 50 15 the the DT cord-279343-ybncwweg 50 16 CRD crd NN cord-279343-ybncwweg 50 17 - - HYPH cord-279343-ybncwweg 50 18 only only JJ cord-279343-ybncwweg 50 19 structure structure NN cord-279343-ybncwweg 50 20 . . . cord-279343-ybncwweg 51 1 At at IN cord-279343-ybncwweg 51 2 the the DT cord-279343-ybncwweg 51 3 C c NN cord-279343-ybncwweg 51 4 - - HYPH cord-279343-ybncwweg 51 5 terminus terminus NN cord-279343-ybncwweg 51 6 we -PRON- PRP cord-279343-ybncwweg 51 7 observed observe VBD cord-279343-ybncwweg 51 8 additional additional JJ cord-279343-ybncwweg 51 9 density density NN cord-279343-ybncwweg 51 10 for for IN cord-279343-ybncwweg 51 11 amino amino JJ cord-279343-ybncwweg 51 12 acids acid NNS cord-279343-ybncwweg 51 13 395 395 CD cord-279343-ybncwweg 51 14 - - HYPH cord-279343-ybncwweg 51 15 398 398 CD cord-279343-ybncwweg 51 16 , , , cord-279343-ybncwweg 51 17 including include VBG cord-279343-ybncwweg 51 18 a a DT cord-279343-ybncwweg 51 19 disulfide disulfide JJ cord-279343-ybncwweg 51 20 bond bond NN cord-279343-ybncwweg 51 21 between between IN cord-279343-ybncwweg 51 22 Cys395 Cys395 . cord-279343-ybncwweg 51 23 and and CC cord-279343-ybncwweg 51 24 Cys265 Cys265 NNP cord-279343-ybncwweg 51 25 , , , cord-279343-ybncwweg 51 26 which which WDT cord-279343-ybncwweg 51 27 links link VBZ cord-279343-ybncwweg 51 28 both both CC cord-279343-ybncwweg 51 29 the the DT cord-279343-ybncwweg 51 30 N N NNP cord-279343-ybncwweg 51 31 - - HYPH cord-279343-ybncwweg 51 32 and and CC cord-279343-ybncwweg 51 33 C C NNP cord-279343-ybncwweg 51 34 - - HYPH cord-279343-ybncwweg 51 35 termini termini NNP cord-279343-ybncwweg 51 36 into into IN cord-279343-ybncwweg 51 37 close close JJ cord-279343-ybncwweg 51 38 proximity proximity NN cord-279343-ybncwweg 51 39 ( ( -LRB- cord-279343-ybncwweg 51 40 Figure figure NN cord-279343-ybncwweg 51 41 1 1 CD cord-279343-ybncwweg 51 42 ) ) -RRB- cord-279343-ybncwweg 51 43 . . . cord-279343-ybncwweg 52 1 As as IN cord-279343-ybncwweg 52 2 a a DT cord-279343-ybncwweg 52 3 result result NN cord-279343-ybncwweg 52 4 , , , cord-279343-ybncwweg 52 5 the the DT cord-279343-ybncwweg 52 6 ring ring NN cord-279343-ybncwweg 52 7 of of IN cord-279343-ybncwweg 52 8 the the DT cord-279343-ybncwweg 52 9 N n CD cord-279343-ybncwweg 52 10 - - HYPH cord-279343-ybncwweg 52 11 terminal terminal NN cord-279343-ybncwweg 52 12 histidine histidine NN cord-279343-ybncwweg 52 13 residue residue NN cord-279343-ybncwweg 52 14 ( ( -LRB- cord-279343-ybncwweg 52 15 His267 His267 NNP cord-279343-ybncwweg 52 16 ) ) -RRB- cord-279343-ybncwweg 52 17 stacks stack VBZ cord-279343-ybncwweg 52 18 against against IN cord-279343-ybncwweg 52 19 the the DT cord-279343-ybncwweg 52 20 ring ring NN cord-279343-ybncwweg 52 21 of of IN cord-279343-ybncwweg 52 22 the the DT cord-279343-ybncwweg 52 23 C C NNP cord-279343-ybncwweg 52 24 - - HYPH cord-279343-ybncwweg 52 25 terminal terminal NN cord-279343-ybncwweg 52 26 Phe396 phe396 CD cord-279343-ybncwweg 52 27 . . . cord-279343-ybncwweg 53 1 The the DT cord-279343-ybncwweg 53 2 helical helical JJ cord-279343-ybncwweg 53 3 repeat repeat NN cord-279343-ybncwweg 53 4 domain domain NN cord-279343-ybncwweg 53 5 has have VBZ cord-279343-ybncwweg 53 6 been be VBN cord-279343-ybncwweg 53 7 shown show VBN cord-279343-ybncwweg 53 8 to to TO cord-279343-ybncwweg 53 9 be be VB cord-279343-ybncwweg 53 10 responsible responsible JJ cord-279343-ybncwweg 53 11 for for IN cord-279343-ybncwweg 53 12 tetramerization tetramerization NN cord-279343-ybncwweg 53 13 of of IN cord-279343-ybncwweg 53 14 the the DT cord-279343-ybncwweg 53 15 receptor receptor NN cord-279343-ybncwweg 53 16 . . . cord-279343-ybncwweg 54 1 Our -PRON- PRP$ cord-279343-ybncwweg 54 2 DC DC NNP cord-279343-ybncwweg 54 3 - - HYPH cord-279343-ybncwweg 54 4 SIGNR SIGNR NNP cord-279343-ybncwweg 54 5 R8 r8 NN cord-279343-ybncwweg 54 6 construct construct NN cord-279343-ybncwweg 54 7 contains contain VBZ cord-279343-ybncwweg 54 8 the the DT cord-279343-ybncwweg 54 9 last last JJ cord-279343-ybncwweg 54 10 repeat repeat NN cord-279343-ybncwweg 54 11 that that WDT cord-279343-ybncwweg 54 12 immediately immediately RB cord-279343-ybncwweg 54 13 precedes precede VBZ cord-279343-ybncwweg 54 14 the the DT cord-279343-ybncwweg 54 15 CRD CRD NNP cord-279343-ybncwweg 54 16 domain domain NN cord-279343-ybncwweg 54 17 . . . cord-279343-ybncwweg 55 1 This this DT cord-279343-ybncwweg 55 2 repeat repeat NN cord-279343-ybncwweg 55 3 region region NN cord-279343-ybncwweg 55 4 encompasses encompass VBZ cord-279343-ybncwweg 55 5 residues residue NNS cord-279343-ybncwweg 55 6 Gln249-Cys265 Gln249-Cys265 NNP cord-279343-ybncwweg 55 7 . . . cord-279343-ybncwweg 56 1 A a DT cord-279343-ybncwweg 56 2 portion portion NN cord-279343-ybncwweg 56 3 of of IN cord-279343-ybncwweg 56 4 this this DT cord-279343-ybncwweg 56 5 repeat repeat NN cord-279343-ybncwweg 56 6 , , , cord-279343-ybncwweg 56 7 Ala260-Cys265 Ala260-Cys265 NNP cord-279343-ybncwweg 56 8 , , , cord-279343-ybncwweg 56 9 is be VBZ cord-279343-ybncwweg 56 10 ordered order VBN cord-279343-ybncwweg 56 11 in in IN cord-279343-ybncwweg 56 12 the the DT cord-279343-ybncwweg 56 13 structure structure NN cord-279343-ybncwweg 56 14 and and CC cord-279343-ybncwweg 56 15 forms form VBZ cord-279343-ybncwweg 56 16 a a DT cord-279343-ybncwweg 56 17 short short JJ cord-279343-ybncwweg 56 18 a a DT cord-279343-ybncwweg 56 19 - - HYPH cord-279343-ybncwweg 56 20 helix helix NN cord-279343-ybncwweg 56 21 . . . cord-279343-ybncwweg 57 1 Although although IN cord-279343-ybncwweg 57 2 the the DT cord-279343-ybncwweg 57 3 rest rest NN cord-279343-ybncwweg 57 4 of of IN cord-279343-ybncwweg 57 5 the the DT cord-279343-ybncwweg 57 6 R8 R8 NNP cord-279343-ybncwweg 57 7 repeat repeat NN cord-279343-ybncwweg 57 8 appears appear VBZ cord-279343-ybncwweg 57 9 disordered disordered JJ cord-279343-ybncwweg 57 10 in in IN cord-279343-ybncwweg 57 11 our -PRON- PRP$ cord-279343-ybncwweg 57 12 crystal crystal NN cord-279343-ybncwweg 57 13 , , , cord-279343-ybncwweg 57 14 presumably presumably RB cord-279343-ybncwweg 57 15 due due IN cord-279343-ybncwweg 57 16 to to IN cord-279343-ybncwweg 57 17 the the DT cord-279343-ybncwweg 57 18 proximity proximity NN cord-279343-ybncwweg 57 19 to to IN cord-279343-ybncwweg 57 20 the the DT cord-279343-ybncwweg 57 21 N n CD cord-279343-ybncwweg 57 22 terminus terminus NN cord-279343-ybncwweg 57 23 of of IN cord-279343-ybncwweg 57 24 the the DT cord-279343-ybncwweg 57 25 expressed express VBN cord-279343-ybncwweg 57 26 recombinant recombinant JJ cord-279343-ybncwweg 57 27 R8 R8 NNP cord-279343-ybncwweg 57 28 construct construct NN cord-279343-ybncwweg 57 29 , , , cord-279343-ybncwweg 57 30 the the DT cord-279343-ybncwweg 57 31 presence presence NN cord-279343-ybncwweg 57 32 of of IN cord-279343-ybncwweg 57 33 a a DT cord-279343-ybncwweg 57 34 short short JJ cord-279343-ybncwweg 57 35 helix helix NN cord-279343-ybncwweg 57 36 is be VBZ cord-279343-ybncwweg 57 37 consistent consistent JJ cord-279343-ybncwweg 57 38 with with IN cord-279343-ybncwweg 57 39 the the DT cord-279343-ybncwweg 57 40 secondary secondary JJ cord-279343-ybncwweg 57 41 structure structure NN cord-279343-ybncwweg 57 42 prediction prediction NN cord-279343-ybncwweg 57 43 that that IN cord-279343-ybncwweg 57 44 the the DT cord-279343-ybncwweg 57 45 repeat repeat NN cord-279343-ybncwweg 57 46 domain domain NN cord-279343-ybncwweg 57 47 is be VBZ cord-279343-ybncwweg 57 48 mainly mainly RB cord-279343-ybncwweg 57 49 a a DT cord-279343-ybncwweg 57 50 - - HYPH cord-279343-ybncwweg 57 51 helical helical NN cord-279343-ybncwweg 57 52 . . . cord-279343-ybncwweg 58 1 The the DT cord-279343-ybncwweg 58 2 N n CD cord-279343-ybncwweg 58 3 - - HYPH cord-279343-ybncwweg 58 4 terminal terminal JJ cord-279343-ybncwweg 58 5 CRD crd NN cord-279343-ybncwweg 58 6 disulfide disulfide NN cord-279343-ybncwweg 58 7 bond bond NN cord-279343-ybncwweg 58 8 ( ( -LRB- cord-279343-ybncwweg 58 9 Cys265-Cys395 Cys265-Cys395 NNP cord-279343-ybncwweg 58 10 ) ) -RRB- cord-279343-ybncwweg 58 11 and and CC cord-279343-ybncwweg 58 12 the the DT cord-279343-ybncwweg 58 13 helical helical JJ cord-279343-ybncwweg 58 14 repeat repeat NN cord-279343-ybncwweg 58 15 conformation conformation NN cord-279343-ybncwweg 58 16 was be VBD cord-279343-ybncwweg 58 17 observed observe VBN cord-279343-ybncwweg 58 18 recently recently RB cord-279343-ybncwweg 58 19 in in IN cord-279343-ybncwweg 58 20 the the DT cord-279343-ybncwweg 58 21 structure structure NN cord-279343-ybncwweg 58 22 of of IN cord-279343-ybncwweg 58 23 DC DC NNP cord-279343-ybncwweg 58 24 - - HYPH cord-279343-ybncwweg 58 25 SIGNR SIGNR NNP cord-279343-ybncwweg 58 26 R7 R7 NNP cord-279343-ybncwweg 58 27 ( ( -LRB- cord-279343-ybncwweg 58 28 CRD crd NN cord-279343-ybncwweg 58 29 with with IN cord-279343-ybncwweg 58 30 its -PRON- PRP$ cord-279343-ybncwweg 58 31 last last JJ cord-279343-ybncwweg 58 32 two two CD cord-279343-ybncwweg 58 33 repeats repeat NNS cord-279343-ybncwweg 58 34 ) ) -RRB- cord-279343-ybncwweg 58 35 . . . cord-279343-ybncwweg 59 1 19 19 CD cord-279343-ybncwweg 59 2 , , , cord-279343-ybncwweg 59 3 22 22 CD cord-279343-ybncwweg 59 4 The the DT cord-279343-ybncwweg 59 5 r.m.s r.m.s JJ cord-279343-ybncwweg 59 6 deviation deviation NN cord-279343-ybncwweg 59 7 between between IN cord-279343-ybncwweg 59 8 the the DT cord-279343-ybncwweg 59 9 CRD CRD NNP cord-279343-ybncwweg 59 10 domain domain NN cord-279343-ybncwweg 59 11 of of IN cord-279343-ybncwweg 59 12 DC DC NNP cord-279343-ybncwweg 59 13 - - HYPH cord-279343-ybncwweg 59 14 SIGNR SIGNR NNP cord-279343-ybncwweg 59 15 R8 R8 NNP cord-279343-ybncwweg 59 16 and and CC cord-279343-ybncwweg 59 17 that that DT cord-279343-ybncwweg 59 18 of of IN cord-279343-ybncwweg 59 19 R7 R7 NNP cord-279343-ybncwweg 59 20 is be VBZ cord-279343-ybncwweg 59 21 0.76 0.76 CD cord-279343-ybncwweg 59 22 Å å NN cord-279343-ybncwweg 59 23 for for IN cord-279343-ybncwweg 59 24 129 129 CD cord-279343-ybncwweg 59 25 C c NN cord-279343-ybncwweg 59 26 a a DT cord-279343-ybncwweg 59 27 atoms atom NNS cord-279343-ybncwweg 59 28 . . . cord-279343-ybncwweg 60 1 However however RB cord-279343-ybncwweg 60 2 , , , cord-279343-ybncwweg 60 3 the the DT cord-279343-ybncwweg 60 4 hinge hinge NN cord-279343-ybncwweg 60 5 angle angle NN cord-279343-ybncwweg 60 6 between between IN cord-279343-ybncwweg 60 7 the the DT cord-279343-ybncwweg 60 8 CRD crd NN cord-279343-ybncwweg 60 9 and and CC cord-279343-ybncwweg 60 10 the the DT cord-279343-ybncwweg 60 11 repeat repeat NN cord-279343-ybncwweg 60 12 domain domain NN cord-279343-ybncwweg 60 13 differs differ VBZ cord-279343-ybncwweg 60 14 by by IN cord-279343-ybncwweg 60 15 about about RB cord-279343-ybncwweg 60 16 408 408 CD cord-279343-ybncwweg 60 17 ( ( -LRB- cord-279343-ybncwweg 60 18 1008 1008 CD cord-279343-ybncwweg 60 19 and and CC cord-279343-ybncwweg 60 20 608 608 CD cord-279343-ybncwweg 60 21 , , , cord-279343-ybncwweg 60 22 respectively respectively RB cord-279343-ybncwweg 60 23 ) ) -RRB- cord-279343-ybncwweg 60 24 between between IN cord-279343-ybncwweg 60 25 the the DT cord-279343-ybncwweg 60 26 two two CD cord-279343-ybncwweg 60 27 structures structure NNS cord-279343-ybncwweg 60 28 , , , cord-279343-ybncwweg 60 29 indicating indicate VBG cord-279343-ybncwweg 60 30 a a DT cord-279343-ybncwweg 60 31 domain domain NN cord-279343-ybncwweg 60 32 flexibility flexibility NN cord-279343-ybncwweg 60 33 between between IN cord-279343-ybncwweg 60 34 the the DT cord-279343-ybncwweg 60 35 CRD crd NN cord-279343-ybncwweg 60 36 and and CC cord-279343-ybncwweg 60 37 the the DT cord-279343-ybncwweg 60 38 repeat repeat NN cord-279343-ybncwweg 60 39 domain domain NN cord-279343-ybncwweg 60 40 of of IN cord-279343-ybncwweg 60 41 the the DT cord-279343-ybncwweg 60 42 receptor receptor NN cord-279343-ybncwweg 60 43 ( ( -LRB- cord-279343-ybncwweg 60 44 Figure figure NN cord-279343-ybncwweg 60 45 1 1 CD cord-279343-ybncwweg 60 46 ) ) -RRB- cord-279343-ybncwweg 60 47 . . . cord-279343-ybncwweg 61 1 The the DT cord-279343-ybncwweg 61 2 primary primary JJ cord-279343-ybncwweg 61 3 calcium calcium NN cord-279343-ybncwweg 61 4 site site NN cord-279343-ybncwweg 61 5 involved involve VBN cord-279343-ybncwweg 61 6 in in IN cord-279343-ybncwweg 61 7 binding bind VBG cord-279343-ybncwweg 61 8 _SP cord-279343-ybncwweg 61 9 where where WRB cord-279343-ybncwweg 61 10 F F NNP cord-279343-ybncwweg 61 11 c c NN cord-279343-ybncwweg 61 12 is be VBZ cord-279343-ybncwweg 61 13 the the DT cord-279343-ybncwweg 61 14 calculated calculated JJ cord-279343-ybncwweg 61 15 and and CC cord-279343-ybncwweg 61 16 F F NNP cord-279343-ybncwweg 61 17 o o NNP cord-279343-ybncwweg 61 18 is be VBZ cord-279343-ybncwweg 61 19 the the DT cord-279343-ybncwweg 61 20 observed observed JJ cord-279343-ybncwweg 61 21 structure structure NN cord-279343-ybncwweg 61 22 factor factor NN cord-279343-ybncwweg 61 23 amplitude amplitude NN cord-279343-ybncwweg 61 24 of of IN cord-279343-ybncwweg 61 25 reflection reflection NN cord-279343-ybncwweg 61 26 h h NN cord-279343-ybncwweg 61 27 for for IN cord-279343-ybncwweg 61 28 the the DT cord-279343-ybncwweg 61 29 working working NN cord-279343-ybncwweg 61 30 or or CC cord-279343-ybncwweg 61 31 5 5 CD cord-279343-ybncwweg 61 32 % % NN cord-279343-ybncwweg 61 33 free free JJ cord-279343-ybncwweg 61 34 set set NN cord-279343-ybncwweg 61 35 , , , cord-279343-ybncwweg 61 36 respectively respectively RB cord-279343-ybncwweg 61 37 . . . cord-279343-ybncwweg 62 1 carbohydrate carbohydrate NN cord-279343-ybncwweg 62 2 ( ( -LRB- cord-279343-ybncwweg 62 3 Ca2 Ca2 NNP cord-279343-ybncwweg 62 4 ) ) -RRB- cord-279343-ybncwweg 62 5 has have VBZ cord-279343-ybncwweg 62 6 a a DT cord-279343-ybncwweg 62 7 well well RB cord-279343-ybncwweg 62 8 - - HYPH cord-279343-ybncwweg 62 9 ordered order VBN cord-279343-ybncwweg 62 10 calcium calcium NN cord-279343-ybncwweg 62 11 ion ion NN cord-279343-ybncwweg 62 12 in in IN cord-279343-ybncwweg 62 13 this this DT cord-279343-ybncwweg 62 14 structure structure NN cord-279343-ybncwweg 62 15 . . . cord-279343-ybncwweg 63 1 The the DT cord-279343-ybncwweg 63 2 amino amino NN cord-279343-ybncwweg 63 3 acid acid NN cord-279343-ybncwweg 63 4 residues residue NNS cord-279343-ybncwweg 63 5 involved involve VBN cord-279343-ybncwweg 63 6 directly directly RB cord-279343-ybncwweg 63 7 in in IN cord-279343-ybncwweg 63 8 coordinating coordinate VBG cord-279343-ybncwweg 63 9 the the DT cord-279343-ybncwweg 63 10 calcium calcium NN cord-279343-ybncwweg 63 11 ion ion NN cord-279343-ybncwweg 63 12 are be VBP cord-279343-ybncwweg 63 13 Glu359 Glu359 NNS cord-279343-ybncwweg 63 14 , , , cord-279343-ybncwweg 63 15 Asn361 asn361 CD cord-279343-ybncwweg 63 16 , , , cord-279343-ybncwweg 63 17 Glu366 Glu366 NNS cord-279343-ybncwweg 63 18 , , , cord-279343-ybncwweg 63 19 and and CC cord-279343-ybncwweg 63 20 Asp378 Asp378 NNP cord-279343-ybncwweg 63 21 , , , cord-279343-ybncwweg 63 22 and and CC cord-279343-ybncwweg 63 23 a a DT cord-279343-ybncwweg 63 24 water water NN cord-279343-ybncwweg 63 25 molecule molecule NN cord-279343-ybncwweg 63 26 ( ( -LRB- cord-279343-ybncwweg 63 27 W19 W19 NNP cord-279343-ybncwweg 63 28 ) ) -RRB- cord-279343-ybncwweg 63 29 . . . cord-279343-ybncwweg 64 1 With with IN cord-279343-ybncwweg 64 2 the the DT cord-279343-ybncwweg 64 3 exception exception NN cord-279343-ybncwweg 64 4 of of IN cord-279343-ybncwweg 64 5 Asn377 asn377 CD cord-279343-ybncwweg 64 6 , , , cord-279343-ybncwweg 64 7 which which WDT cord-279343-ybncwweg 64 8 is be VBZ cord-279343-ybncwweg 64 9 rotated rotate VBN cord-279343-ybncwweg 64 10 out out IN cord-279343-ybncwweg 64 11 of of IN cord-279343-ybncwweg 64 12 the the DT cord-279343-ybncwweg 64 13 calcium calcium NN cord-279343-ybncwweg 64 14 coordination coordination NN cord-279343-ybncwweg 64 15 , , , cord-279343-ybncwweg 64 16 the the DT cord-279343-ybncwweg 64 17 ligand ligand NN cord-279343-ybncwweg 64 18 positions position NNS cord-279343-ybncwweg 64 19 are be VBP cord-279343-ybncwweg 64 20 well well RB cord-279343-ybncwweg 64 21 conserved conserve VBN cord-279343-ybncwweg 64 22 between between IN cord-279343-ybncwweg 64 23 the the DT cord-279343-ybncwweg 64 24 R8 r8 NN cord-279343-ybncwweg 64 25 and and CC cord-279343-ybncwweg 64 26 CRD crd NN cord-279343-ybncwweg 64 27 - - HYPH cord-279343-ybncwweg 64 28 only only JJ cord-279343-ybncwweg 64 29 structures structure NNS cord-279343-ybncwweg 64 30 of of IN cord-279343-ybncwweg 64 31 DC DC NNP cord-279343-ybncwweg 64 32 - - HYPH cord-279343-ybncwweg 64 33 SIGNR SIGNR NNP cord-279343-ybncwweg 64 34 ( ( -LRB- cord-279343-ybncwweg 64 35 Figure figure NN cord-279343-ybncwweg 64 36 2 2 CD cord-279343-ybncwweg 64 37 ( ( -LRB- cord-279343-ybncwweg 64 38 a a LS cord-279343-ybncwweg 64 39 ) ) -RRB- cord-279343-ybncwweg 64 40 and and CC cord-279343-ybncwweg 64 41 Table Table NNP cord-279343-ybncwweg 64 42 2 2 CD cord-279343-ybncwweg 64 43 ) ) -RRB- cord-279343-ybncwweg 64 44 . . . cord-279343-ybncwweg 65 1 In in IN cord-279343-ybncwweg 65 2 contrast contrast NN cord-279343-ybncwweg 65 3 , , , cord-279343-ybncwweg 65 4 no no DT cord-279343-ybncwweg 65 5 attributable attributable JJ cord-279343-ybncwweg 65 6 electron electron NN cord-279343-ybncwweg 65 7 density density NN cord-279343-ybncwweg 65 8 was be VBD cord-279343-ybncwweg 65 9 found find VBN cord-279343-ybncwweg 65 10 near near IN cord-279343-ybncwweg 65 11 the the DT cord-279343-ybncwweg 65 12 two two CD cord-279343-ybncwweg 65 13 auxiliary auxiliary JJ cord-279343-ybncwweg 65 14 calcium calcium NN cord-279343-ybncwweg 65 15 ions ion NNS cord-279343-ybncwweg 65 16 ( ( -LRB- cord-279343-ybncwweg 65 17 Ca1 ca1 NN cord-279343-ybncwweg 65 18 and and CC cord-279343-ybncwweg 65 19 Ca3 ca3 NN cord-279343-ybncwweg 65 20 ) ) -RRB- cord-279343-ybncwweg 65 21 binding binding NN cord-279343-ybncwweg 65 22 site site NN cord-279343-ybncwweg 65 23 and and CC cord-279343-ybncwweg 65 24 the the DT cord-279343-ybncwweg 65 25 two two CD cord-279343-ybncwweg 65 26 residues residue NNS cord-279343-ybncwweg 65 27 coordinating coordinate VBG cord-279343-ybncwweg 65 28 the the DT cord-279343-ybncwweg 65 29 auxiliary auxiliary JJ cord-279343-ybncwweg 65 30 calcium calcium NN cord-279343-ybncwweg 65 31 , , , cord-279343-ybncwweg 65 32 Asn362 asn362 ADD cord-279343-ybncwweg 65 33 and and CC cord-279343-ybncwweg 65 34 Asn365 asn365 CD cord-279343-ybncwweg 65 35 , , , cord-279343-ybncwweg 65 36 moved move VBD cord-279343-ybncwweg 65 37 4.0 4.0 CD cord-279343-ybncwweg 65 38 Å å NN cord-279343-ybncwweg 65 39 and and CC cord-279343-ybncwweg 65 40 1.9 1.9 CD cord-279343-ybncwweg 65 41 Å å NN cord-279343-ybncwweg 65 42 , , , cord-279343-ybncwweg 65 43 respectively respectively RB cord-279343-ybncwweg 65 44 , , , cord-279343-ybncwweg 65 45 compared compare VBN cord-279343-ybncwweg 65 46 to to IN cord-279343-ybncwweg 65 47 the the DT cord-279343-ybncwweg 65 48 CRD crd NN cord-279343-ybncwweg 65 49 - - HYPH cord-279343-ybncwweg 65 50 only only JJ cord-279343-ybncwweg 65 51 structure structure NN cord-279343-ybncwweg 65 52 ( ( -LRB- cord-279343-ybncwweg 65 53 1K9J 1k9j CD cord-279343-ybncwweg 65 54 ) ) -RRB- cord-279343-ybncwweg 65 55 . . . cord-279343-ybncwweg 66 1 The the DT cord-279343-ybncwweg 66 2 movement movement NN cord-279343-ybncwweg 66 3 of of IN cord-279343-ybncwweg 66 4 Asn362 asn362 CD cord-279343-ybncwweg 66 5 and and CC cord-279343-ybncwweg 66 6 Asn365 Asn365 NFP cord-279343-ybncwweg 66 7 effectively effectively RB cord-279343-ybncwweg 66 8 disrupts disrupt VBZ cord-279343-ybncwweg 66 9 the the DT cord-279343-ybncwweg 66 10 coordination coordination NN cord-279343-ybncwweg 66 11 of of IN cord-279343-ybncwweg 66 12 Ca1 ca1 NN cord-279343-ybncwweg 66 13 and and CC cord-279343-ybncwweg 66 14 Ca3 ca3 NN cord-279343-ybncwweg 66 15 , , , cord-279343-ybncwweg 66 16 further further JJ cord-279343-ybncwweg 66 17 evidence evidence NN cord-279343-ybncwweg 66 18 that that IN cord-279343-ybncwweg 66 19 both both DT cord-279343-ybncwweg 66 20 auxiliary auxiliary JJ cord-279343-ybncwweg 66 21 calcium calcium NN cord-279343-ybncwweg 66 22 ions ion NNS cord-279343-ybncwweg 66 23 are be VBP cord-279343-ybncwweg 66 24 absent absent JJ cord-279343-ybncwweg 66 25 from from IN cord-279343-ybncwweg 66 26 the the DT cord-279343-ybncwweg 66 27 DC DC NNP cord-279343-ybncwweg 66 28 - - HYPH cord-279343-ybncwweg 66 29 SIGNR SIGNR NNP cord-279343-ybncwweg 66 30 R8 R8 NNP cord-279343-ybncwweg 66 31 structure structure NN cord-279343-ybncwweg 66 32 . . . cord-279343-ybncwweg 67 1 Despite despite IN cord-279343-ybncwweg 67 2 the the DT cord-279343-ybncwweg 67 3 presence presence NN cord-279343-ybncwweg 67 4 of of IN cord-279343-ybncwweg 67 5 mannose mannose NN cord-279343-ybncwweg 67 6 in in IN cord-279343-ybncwweg 67 7 the the DT cord-279343-ybncwweg 67 8 crystallization crystallization NN cord-279343-ybncwweg 67 9 buffer buffer NN cord-279343-ybncwweg 67 10 and and CC cord-279343-ybncwweg 67 11 the the DT cord-279343-ybncwweg 67 12 existence existence NN cord-279343-ybncwweg 67 13 of of IN cord-279343-ybncwweg 67 14 additional additional JJ cord-279343-ybncwweg 67 15 electron electron NN cord-279343-ybncwweg 67 16 density density NN cord-279343-ybncwweg 67 17 at at IN cord-279343-ybncwweg 67 18 the the DT cord-279343-ybncwweg 67 19 putative putative JJ cord-279343-ybncwweg 67 20 carbohydrate carbohydrate NN cord-279343-ybncwweg 67 21 - - HYPH cord-279343-ybncwweg 67 22 binding bind VBG cord-279343-ybncwweg 67 23 site site NN cord-279343-ybncwweg 67 24 , , , cord-279343-ybncwweg 67 25 attempts attempt VBZ cord-279343-ybncwweg 67 26 to to TO cord-279343-ybncwweg 67 27 fit fit VB cord-279343-ybncwweg 67 28 mannose mannose NN cord-279343-ybncwweg 67 29 were be VBD cord-279343-ybncwweg 67 30 not not RB cord-279343-ybncwweg 67 31 satisfactory satisfactory JJ cord-279343-ybncwweg 67 32 , , , cord-279343-ybncwweg 67 33 and and CC cord-279343-ybncwweg 67 34 instead instead RB cord-279343-ybncwweg 67 35 , , , cord-279343-ybncwweg 67 36 water water NN cord-279343-ybncwweg 67 37 molecules molecule NNS cord-279343-ybncwweg 67 38 were be VBD cord-279343-ybncwweg 67 39 built build VBN cord-279343-ybncwweg 67 40 throughout throughout IN cord-279343-ybncwweg 67 41 the the DT cord-279343-ybncwweg 67 42 carbohydrate carbohydrate NN cord-279343-ybncwweg 67 43 - - HYPH cord-279343-ybncwweg 67 44 binding bind VBG cord-279343-ybncwweg 67 45 site site NN cord-279343-ybncwweg 67 46 . . . cord-279343-ybncwweg 68 1 The the DT cord-279343-ybncwweg 68 2 comparison comparison NN cord-279343-ybncwweg 68 3 between between IN cord-279343-ybncwweg 68 4 the the DT cord-279343-ybncwweg 68 5 current current JJ cord-279343-ybncwweg 68 6 apo apo NNP cord-279343-ybncwweg 68 7 - - HYPH cord-279343-ybncwweg 68 8 DC DC NNP cord-279343-ybncwweg 68 9 - - HYPH cord-279343-ybncwweg 68 10 SIGNR SIGNR NNP cord-279343-ybncwweg 68 11 R8 R8 NNP cord-279343-ybncwweg 68 12 and and CC cord-279343-ybncwweg 68 13 the the DT cord-279343-ybncwweg 68 14 mannose mannose NN cord-279343-ybncwweg 68 15 - - HYPH cord-279343-ybncwweg 68 16 containing contain VBG cord-279343-ybncwweg 68 17 CRD crd NN cord-279343-ybncwweg 68 18 structure structure NN cord-279343-ybncwweg 68 19 showed show VBD cord-279343-ybncwweg 68 20 both both CC cord-279343-ybncwweg 68 21 the the DT cord-279343-ybncwweg 68 22 primary primary JJ cord-279343-ybncwweg 68 23 calcium calcium NN cord-279343-ybncwweg 68 24 / / SYM cord-279343-ybncwweg 68 25 carbohydrate carbohydrate NN cord-279343-ybncwweg 68 26 - - HYPH cord-279343-ybncwweg 68 27 binding bind VBG cord-279343-ybncwweg 68 28 loop loop NN cord-279343-ybncwweg 68 29 ( ( -LRB- cord-279343-ybncwweg 68 30 residues residue NNS cord-279343-ybncwweg 68 31 361 361 CD cord-279343-ybncwweg 68 32 - - SYM cord-279343-ybncwweg 68 33 366 366 CD cord-279343-ybncwweg 68 34 ) ) -RRB- cord-279343-ybncwweg 68 35 and and CC cord-279343-ybncwweg 68 36 the the DT cord-279343-ybncwweg 68 37 secondary secondary JJ cord-279343-ybncwweg 68 38 calcium calcium NN cord-279343-ybncwweg 68 39 - - HYPH cord-279343-ybncwweg 68 40 binding bind VBG cord-279343-ybncwweg 68 41 loop loop NN cord-279343-ybncwweg 68 42 ( ( -LRB- cord-279343-ybncwweg 68 43 residues residue NNS cord-279343-ybncwweg 68 44 332 332 CD cord-279343-ybncwweg 68 45 - - SYM cord-279343-ybncwweg 68 46 339 339 CD cord-279343-ybncwweg 68 47 ) ) -RRB- cord-279343-ybncwweg 68 48 assumed assume VBD cord-279343-ybncwweg 68 49 an an DT cord-279343-ybncwweg 68 50 " " `` cord-279343-ybncwweg 68 51 open open JJ cord-279343-ybncwweg 68 52 " " '' cord-279343-ybncwweg 68 53 conformation conformation NN cord-279343-ybncwweg 68 54 in in IN cord-279343-ybncwweg 68 55 the the DT cord-279343-ybncwweg 68 56 apo apo NNP cord-279343-ybncwweg 68 57 state state NN cord-279343-ybncwweg 68 58 while while IN cord-279343-ybncwweg 68 59 adopting adopt VBG cord-279343-ybncwweg 68 60 a a DT cord-279343-ybncwweg 68 61 " " `` cord-279343-ybncwweg 68 62 closed closed JJ cord-279343-ybncwweg 68 63 " " '' cord-279343-ybncwweg 68 64 conformation conformation NN cord-279343-ybncwweg 68 65 in in IN cord-279343-ybncwweg 68 66 the the DT cord-279343-ybncwweg 68 67 carbohydrate carbohydrate NN cord-279343-ybncwweg 68 68 - - HYPH cord-279343-ybncwweg 68 69 bound bind VBN cord-279343-ybncwweg 68 70 state state NN cord-279343-ybncwweg 68 71 of of IN cord-279343-ybncwweg 68 72 the the DT cord-279343-ybncwweg 68 73 receptor receptor NN cord-279343-ybncwweg 68 74 ( ( -LRB- cord-279343-ybncwweg 68 75 Figure figure NN cord-279343-ybncwweg 68 76 2 2 CD cord-279343-ybncwweg 68 77 ) ) -RRB- cord-279343-ybncwweg 68 78 . . . cord-279343-ybncwweg 69 1 In in IN cord-279343-ybncwweg 69 2 the the DT cord-279343-ybncwweg 69 3 presence presence NN cord-279343-ybncwweg 69 4 of of IN cord-279343-ybncwweg 69 5 carbohydrate carbohydrate NN cord-279343-ybncwweg 69 6 , , , cord-279343-ybncwweg 69 7 the the DT cord-279343-ybncwweg 69 8 conformation conformation NN cord-279343-ybncwweg 69 9 of of IN cord-279343-ybncwweg 69 10 the the DT cord-279343-ybncwweg 69 11 primary primary JJ cord-279343-ybncwweg 69 12 carbohydrate carbohydrate NN cord-279343-ybncwweg 69 13 - - HYPH cord-279343-ybncwweg 69 14 binding bind VBG cord-279343-ybncwweg 69 15 loop loop NN cord-279343-ybncwweg 69 16 ( ( -LRB- cord-279343-ybncwweg 69 17 residues residue NNS cord-279343-ybncwweg 69 18 361 361 CD cord-279343-ybncwweg 69 19 - - SYM cord-279343-ybncwweg 69 20 366 366 CD cord-279343-ybncwweg 69 21 ) ) -RRB- cord-279343-ybncwweg 69 22 , , , cord-279343-ybncwweg 69 23 the the DT cord-279343-ybncwweg 69 24 closed closed JJ cord-279343-ybncwweg 69 25 conformation conformation NN cord-279343-ybncwweg 69 26 , , , cord-279343-ybncwweg 69 27 is be VBZ cord-279343-ybncwweg 69 28 defined define VBN cord-279343-ybncwweg 69 29 by by IN cord-279343-ybncwweg 69 30 the the DT cord-279343-ybncwweg 69 31 coordinating coordinate VBG cord-279343-ybncwweg 69 32 hydrogen hydrogen NN cord-279343-ybncwweg 69 33 bonds bond NNS cord-279343-ybncwweg 69 34 between between IN cord-279343-ybncwweg 69 35 the the DT cord-279343-ybncwweg 69 36 sidechains sidechain NNS cord-279343-ybncwweg 69 37 of of IN cord-279343-ybncwweg 69 38 Asn361 asn361 CD cord-279343-ybncwweg 69 39 and and CC cord-279343-ybncwweg 69 40 Ser363 ser363 CD cord-279343-ybncwweg 69 41 , , , cord-279343-ybncwweg 69 42 and and CC cord-279343-ybncwweg 69 43 the the DT cord-279343-ybncwweg 69 44 bound bind VBN cord-279343-ybncwweg 69 45 N n NN cord-279343-ybncwweg 69 46 - - HYPH cord-279343-ybncwweg 69 47 acetyl acetyl NN cord-279343-ybncwweg 69 48 - - HYPH cord-279343-ybncwweg 69 49 D d NN cord-279343-ybncwweg 69 50 - - HYPH cord-279343-ybncwweg 69 51 glucosamine glucosamine JJ cord-279343-ybncwweg 69 52 ( ( -LRB- cord-279343-ybncwweg 69 53 GlcNAc1 glcnac1 NN cord-279343-ybncwweg 69 54 ) ) -RRB- cord-279343-ybncwweg 69 55 as as RB cord-279343-ybncwweg 69 56 well well RB cord-279343-ybncwweg 69 57 as as IN cord-279343-ybncwweg 69 58 between between IN cord-279343-ybncwweg 69 59 Asn362 asn362 CD cord-279343-ybncwweg 69 60 and and CC cord-279343-ybncwweg 69 61 Asn365 asn365 CD cord-279343-ybncwweg 69 62 , , , cord-279343-ybncwweg 69 63 and and CC cord-279343-ybncwweg 69 64 their -PRON- PRP$ cord-279343-ybncwweg 69 65 bound bind VBN cord-279343-ybncwweg 69 66 Ca1 ca1 NN cord-279343-ybncwweg 69 67 and and CC cord-279343-ybncwweg 69 68 Ca3 ca3 NN cord-279343-ybncwweg 69 69 . . . cord-279343-ybncwweg 70 1 In in IN cord-279343-ybncwweg 70 2 the the DT cord-279343-ybncwweg 70 3 absence absence NN cord-279343-ybncwweg 70 4 of of IN cord-279343-ybncwweg 70 5 carbohydrate carbohydrate NN cord-279343-ybncwweg 70 6 , , , cord-279343-ybncwweg 70 7 however however RB cord-279343-ybncwweg 70 8 , , , cord-279343-ybncwweg 70 9 ( ( -LRB- cord-279343-ybncwweg 70 10 Table table NN cord-279343-ybncwweg 70 11 2 2 CD cord-279343-ybncwweg 70 12 and and CC cord-279343-ybncwweg 70 13 Figure figure NN cord-279343-ybncwweg 70 14 2 2 CD cord-279343-ybncwweg 70 15 ) ) -RRB- cord-279343-ybncwweg 70 16 . . . cord-279343-ybncwweg 71 1 Interestingly interestingly RB cord-279343-ybncwweg 71 2 , , , cord-279343-ybncwweg 71 3 an an DT cord-279343-ybncwweg 71 4 arginine arginine NN cord-279343-ybncwweg 71 5 residue residue NN cord-279343-ybncwweg 71 6 from from IN cord-279343-ybncwweg 71 7 a a DT cord-279343-ybncwweg 71 8 symmetry symmetry NN cord-279343-ybncwweg 71 9 - - HYPH cord-279343-ybncwweg 71 10 related relate VBN cord-279343-ybncwweg 71 11 molecule molecule NN cord-279343-ybncwweg 71 12 , , , cord-279343-ybncwweg 71 13 Arg397 arg397 UH cord-279343-ybncwweg 71 14 , , , cord-279343-ybncwweg 71 15 is be VBZ cord-279343-ybncwweg 71 16 found find VBN cord-279343-ybncwweg 71 17 near near IN cord-279343-ybncwweg 71 18 the the DT cord-279343-ybncwweg 71 19 putative putative JJ cord-279343-ybncwweg 71 20 Ca1 ca1 NN cord-279343-ybncwweg 71 21 and and CC cord-279343-ybncwweg 71 22 Ca3 ca3 NN cord-279343-ybncwweg 71 23 sites site NNS cord-279343-ybncwweg 71 24 , , , cord-279343-ybncwweg 71 25 forming form VBG cord-279343-ybncwweg 71 26 a a DT cord-279343-ybncwweg 71 27 hydrogen hydrogen NN cord-279343-ybncwweg 71 28 bond bond NN cord-279343-ybncwweg 71 29 with with IN cord-279343-ybncwweg 71 30 the the DT cord-279343-ybncwweg 71 31 secondary secondary JJ cord-279343-ybncwweg 71 32 calciumbinding calciumbinding NN cord-279343-ybncwweg 71 33 loop loop NN cord-279343-ybncwweg 71 34 to to TO cord-279343-ybncwweg 71 35 neutralize neutralize VB cord-279343-ybncwweg 71 36 , , , cord-279343-ybncwweg 71 37 as as IN cord-279343-ybncwweg 71 38 a a DT cord-279343-ybncwweg 71 39 surrogate surrogate NN cord-279343-ybncwweg 71 40 to to IN cord-279343-ybncwweg 71 41 the the DT cord-279343-ybncwweg 71 42 missing miss VBG cord-279343-ybncwweg 71 43 calcium calcium NN cord-279343-ybncwweg 71 44 ion ion NN cord-279343-ybncwweg 71 45 , , , cord-279343-ybncwweg 71 46 the the DT cord-279343-ybncwweg 71 47 partial partial JJ cord-279343-ybncwweg 71 48 negative negative JJ cord-279343-ybncwweg 71 49 charges charge NNS cord-279343-ybncwweg 71 50 of of IN cord-279343-ybncwweg 71 51 the the DT cord-279343-ybncwweg 71 52 region region NN cord-279343-ybncwweg 71 53 . . . cord-279343-ybncwweg 72 1 Despite despite IN cord-279343-ybncwweg 72 2 the the DT cord-279343-ybncwweg 72 3 presence presence NN cord-279343-ybncwweg 72 4 of of IN cord-279343-ybncwweg 72 5 5 5 CD cord-279343-ybncwweg 72 6 mM mm CD cord-279343-ybncwweg 72 7 CaCl CaCl NNP cord-279343-ybncwweg 72 8 2 2 CD cord-279343-ybncwweg 72 9 in in IN cord-279343-ybncwweg 72 10 the the DT cord-279343-ybncwweg 72 11 crystallization crystallization NN cord-279343-ybncwweg 72 12 setup setup NN cord-279343-ybncwweg 72 13 , , , cord-279343-ybncwweg 72 14 both both CC cord-279343-ybncwweg 72 15 Ca1 ca1 NN cord-279343-ybncwweg 72 16 and and CC cord-279343-ybncwweg 72 17 Ca3 ca3 NN cord-279343-ybncwweg 72 18 appear appear VB cord-279343-ybncwweg 72 19 to to TO cord-279343-ybncwweg 72 20 be be VB cord-279343-ybncwweg 72 21 absent absent JJ cord-279343-ybncwweg 72 22 , , , cord-279343-ybncwweg 72 23 suggesting suggest VBG cord-279343-ybncwweg 72 24 that that IN cord-279343-ybncwweg 72 25 these these DT cord-279343-ybncwweg 72 26 auxiliary auxiliary JJ cord-279343-ybncwweg 72 27 calcium calcium NN cord-279343-ybncwweg 72 28 sites site NNS cord-279343-ybncwweg 72 29 are be VBP cord-279343-ybncwweg 72 30 of of IN cord-279343-ybncwweg 72 31 low low JJ cord-279343-ybncwweg 72 32 affinity affinity NN cord-279343-ybncwweg 72 33 compared compare VBN cord-279343-ybncwweg 72 34 to to IN cord-279343-ybncwweg 72 35 that that DT cord-279343-ybncwweg 72 36 of of IN cord-279343-ybncwweg 72 37 the the DT cord-279343-ybncwweg 72 38 primary primary JJ cord-279343-ybncwweg 72 39 calcium calcium NN cord-279343-ybncwweg 72 40 - - HYPH cord-279343-ybncwweg 72 41 binding bind VBG cord-279343-ybncwweg 72 42 site site NN cord-279343-ybncwweg 72 43 ( ( -LRB- cord-279343-ybncwweg 72 44 Ca2 Ca2 NNP cord-279343-ybncwweg 72 45 ) ) -RRB- cord-279343-ybncwweg 72 46 , , , cord-279343-ybncwweg 72 47 and and CC cord-279343-ybncwweg 72 48 that that IN cord-279343-ybncwweg 72 49 their -PRON- PRP$ cord-279343-ybncwweg 72 50 occupancies occupancy NNS cord-279343-ybncwweg 72 51 are be VBP cord-279343-ybncwweg 72 52 coupled couple VBN cord-279343-ybncwweg 72 53 to to IN cord-279343-ybncwweg 72 54 the the DT cord-279343-ybncwweg 72 55 binding binding NN cord-279343-ybncwweg 72 56 of of IN cord-279343-ybncwweg 72 57 the the DT cord-279343-ybncwweg 72 58 carbohydrate carbohydrate NN cord-279343-ybncwweg 72 59 ligand ligand NN cord-279343-ybncwweg 72 60 . . . cord-279343-ybncwweg 73 1 Namely namely RB cord-279343-ybncwweg 73 2 , , , cord-279343-ybncwweg 73 3 they -PRON- PRP cord-279343-ybncwweg 73 4 are be VBP cord-279343-ybncwweg 73 5 glycaninduced glycaninduce VBN cord-279343-ybncwweg 73 6 calcium calcium NN cord-279343-ybncwweg 73 7 - - HYPH cord-279343-ybncwweg 73 8 binding bind VBG cord-279343-ybncwweg 73 9 sites site NNS cord-279343-ybncwweg 73 10 . . . cord-279343-ybncwweg 74 1 In in IN cord-279343-ybncwweg 74 2 the the DT cord-279343-ybncwweg 74 3 absence absence NN cord-279343-ybncwweg 74 4 of of IN cord-279343-ybncwweg 74 5 the the DT cord-279343-ybncwweg 74 6 bound bind VBN cord-279343-ybncwweg 74 7 carbohydrate carbohydrate NN cord-279343-ybncwweg 74 8 , , , cord-279343-ybncwweg 74 9 both both DT cord-279343-ybncwweg 74 10 calcium calcium NN cord-279343-ybncwweg 74 11 coordination coordination NN cord-279343-ybncwweg 74 12 loops loop NNS cord-279343-ybncwweg 74 13 adopt adopt VBP cord-279343-ybncwweg 74 14 an an DT cord-279343-ybncwweg 74 15 open open JJ cord-279343-ybncwweg 74 16 , , , cord-279343-ybncwweg 74 17 conformation conformation NN cord-279343-ybncwweg 74 18 ejecting eject VBG cord-279343-ybncwweg 74 19 the the DT cord-279343-ybncwweg 74 20 auxiliary auxiliary JJ cord-279343-ybncwweg 74 21 calcium calcium NN cord-279343-ybncwweg 74 22 ions ion NNS cord-279343-ybncwweg 74 23 and and CC cord-279343-ybncwweg 74 24 become become VBP cord-279343-ybncwweg 74 25 less less RBR cord-279343-ybncwweg 74 26 ordered order VBN cord-279343-ybncwweg 74 27 . . . cord-279343-ybncwweg 75 1 The the DT cord-279343-ybncwweg 75 2 result result NN cord-279343-ybncwweg 75 3 suggests suggest VBZ cord-279343-ybncwweg 75 4 the the DT cord-279343-ybncwweg 75 5 function function NN cord-279343-ybncwweg 75 6 of of IN cord-279343-ybncwweg 75 7 these these DT cord-279343-ybncwweg 75 8 glycaninduced glycaninduce VBN cord-279343-ybncwweg 75 9 auxiliary auxiliary JJ cord-279343-ybncwweg 75 10 calcium calcium NN cord-279343-ybncwweg 75 11 is be VBZ cord-279343-ybncwweg 75 12 to to TO cord-279343-ybncwweg 75 13 stabilize stabilize VB cord-279343-ybncwweg 75 14 the the DT cord-279343-ybncwweg 75 15 conformation conformation NN cord-279343-ybncwweg 75 16 of of IN cord-279343-ybncwweg 75 17 the the DT cord-279343-ybncwweg 75 18 glycan glycan NN cord-279343-ybncwweg 75 19 - - HYPH cord-279343-ybncwweg 75 20 binding bind VBG cord-279343-ybncwweg 75 21 loops loop NNS cord-279343-ybncwweg 75 22 synergistically synergistically RB cord-279343-ybncwweg 75 23 to to IN cord-279343-ybncwweg 75 24 the the DT cord-279343-ybncwweg 75 25 bound bind VBN cord-279343-ybncwweg 75 26 glycan glycan NN cord-279343-ybncwweg 75 27 rather rather RB cord-279343-ybncwweg 75 28 than than IN cord-279343-ybncwweg 75 29 to to TO cord-279343-ybncwweg 75 30 preconform preconform VB cord-279343-ybncwweg 75 31 the the DT cord-279343-ybncwweg 75 32 glycan glycan NN cord-279343-ybncwweg 75 33 - - HYPH cord-279343-ybncwweg 75 34 binding bind VBG cord-279343-ybncwweg 75 35 loop loop NN cord-279343-ybncwweg 75 36 . . . cord-279343-ybncwweg 76 1 [ [ -LRB- cord-279343-ybncwweg 76 2 23 23 CD cord-279343-ybncwweg 76 3 ] ] -RRB- cord-279343-ybncwweg 76 4 [ [ -LRB- cord-279343-ybncwweg 76 5 24 24 CD cord-279343-ybncwweg 76 6 ] ] -RRB- cord-279343-ybncwweg 76 7 [ [ -LRB- cord-279343-ybncwweg 76 8 25 25 CD cord-279343-ybncwweg 76 9 ] ] -RRB- cord-279343-ybncwweg 77 1 Modeling model VBG cord-279343-ybncwweg 77 2 of of IN cord-279343-ybncwweg 77 3 the the DT cord-279343-ybncwweg 77 4 DC DC NNP cord-279343-ybncwweg 77 5 - - HYPH cord-279343-ybncwweg 77 6 SIGN SIGN NNP cord-279343-ybncwweg 77 7 / / SYM cord-279343-ybncwweg 77 8 R r NN cord-279343-ybncwweg 77 9 tetramer tetramer NN cord-279343-ybncwweg 78 1 A a DT cord-279343-ybncwweg 78 2 homology homology NN cord-279343-ybncwweg 78 3 search search NN cord-279343-ybncwweg 78 4 was be VBD cord-279343-ybncwweg 78 5 performed perform VBN cord-279343-ybncwweg 78 6 using use VBG cord-279343-ybncwweg 78 7 sequences sequence NNS cord-279343-ybncwweg 78 8 corresponding correspond VBG cord-279343-ybncwweg 78 9 to to IN cord-279343-ybncwweg 78 10 various various JJ cord-279343-ybncwweg 78 11 lengths length NNS cord-279343-ybncwweg 78 12 of of IN cord-279343-ybncwweg 78 13 the the DT cord-279343-ybncwweg 78 14 repeat repeat NN cord-279343-ybncwweg 78 15 domain domain NN cord-279343-ybncwweg 78 16 of of IN cord-279343-ybncwweg 78 17 DC DC NNP cord-279343-ybncwweg 78 18 - - HYPH cord-279343-ybncwweg 78 19 SIGNR SIGNR NNP cord-279343-ybncwweg 78 20 against against IN cord-279343-ybncwweg 78 21 known know VBN cord-279343-ybncwweg 78 22 structures structure NNS cord-279343-ybncwweg 78 23 in in IN cord-279343-ybncwweg 78 24 the the DT cord-279343-ybncwweg 78 25 Protein Protein NNP cord-279343-ybncwweg 78 26 Data Data NNP cord-279343-ybncwweg 78 27 Bank Bank NNP cord-279343-ybncwweg 78 28 ( ( -LRB- cord-279343-ybncwweg 78 29 PDB PDB NNP cord-279343-ybncwweg 78 30 ) ) -RRB- cord-279343-ybncwweg 78 31 . . . cord-279343-ybncwweg 79 1 The the DT cord-279343-ybncwweg 79 2 resulting result VBG cord-279343-ybncwweg 79 3 sequence sequence NN cord-279343-ybncwweg 79 4 identities identity NNS cord-279343-ybncwweg 79 5 between between IN cord-279343-ybncwweg 79 6 segments segment NNS cord-279343-ybncwweg 79 7 of of IN cord-279343-ybncwweg 79 8 known know VBN cord-279343-ybncwweg 79 9 structures structure NNS cord-279343-ybncwweg 79 10 and and CC cord-279343-ybncwweg 79 11 portions portion NNS cord-279343-ybncwweg 79 12 of of IN cord-279343-ybncwweg 79 13 DC DC NNP cord-279343-ybncwweg 79 14 - - HYPH cord-279343-ybncwweg 79 15 SIGNR SIGNR NNP cord-279343-ybncwweg 79 16 repeats repeat VBZ cord-279343-ybncwweg 79 17 are be VBP cord-279343-ybncwweg 79 18 32 32 CD cord-279343-ybncwweg 79 19 % % NN cord-279343-ybncwweg 79 20 between between IN cord-279343-ybncwweg 79 21 residues residue NNS cord-279343-ybncwweg 79 22 32 32 CD cord-279343-ybncwweg 79 23 - - SYM cord-279343-ybncwweg 79 24 117 117 CD cord-279343-ybncwweg 79 25 of of IN cord-279343-ybncwweg 79 26 the the DT cord-279343-ybncwweg 79 27 focal focal JJ cord-279343-ybncwweg 79 28 adhesion adhesion NN cord-279343-ybncwweg 79 29 kinase kinase NN cord-279343-ybncwweg 79 30 ( ( -LRB- cord-279343-ybncwweg 79 31 PDB PDB NNP cord-279343-ybncwweg 79 32 code code NN cord-279343-ybncwweg 79 33 1K05 1k05 CD cord-279343-ybncwweg 79 34 ) ) -RRB- cord-279343-ybncwweg 79 35 and and CC cord-279343-ybncwweg 79 36 repeats repeat VBZ cord-279343-ybncwweg 79 37 R1-R3 R1-R3 NNP cord-279343-ybncwweg 79 38 of of IN cord-279343-ybncwweg 79 39 DC DC NNP cord-279343-ybncwweg 79 40 - - HYPH cord-279343-ybncwweg 79 41 SIGNR SIGNR NNP cord-279343-ybncwweg 79 42 ( ( -LRB- cord-279343-ybncwweg 79 43 Figure Figure NNP cord-279343-ybncwweg 79 44 3 3 CD cord-279343-ybncwweg 79 45 ) ) -RRB- cord-279343-ybncwweg 79 46 , , , cord-279343-ybncwweg 79 47 31 31 CD cord-279343-ybncwweg 79 48 % % NN cord-279343-ybncwweg 79 49 between between IN cord-279343-ybncwweg 79 50 residues residue NNS cord-279343-ybncwweg 79 51 328 328 CD cord-279343-ybncwweg 79 52 - - SYM cord-279343-ybncwweg 79 53 390 390 CD cord-279343-ybncwweg 79 54 of of IN cord-279343-ybncwweg 79 55 Muts Muts NNP cord-279343-ybncwweg 79 56 ( ( -LRB- cord-279343-ybncwweg 79 57 PDB PDB NNP cord-279343-ybncwweg 79 58 code code NN cord-279343-ybncwweg 79 59 1NNE 1nne CD cord-279343-ybncwweg 79 60 ) ) -RRB- cord-279343-ybncwweg 79 61 and and CC cord-279343-ybncwweg 79 62 repeats repeat VBZ cord-279343-ybncwweg 79 63 R5-R7 R5-R7 NNP cord-279343-ybncwweg 79 64 , , , cord-279343-ybncwweg 79 65 33 33 CD cord-279343-ybncwweg 79 66 % % NN cord-279343-ybncwweg 79 67 between between IN cord-279343-ybncwweg 79 68 residues residue NNS cord-279343-ybncwweg 79 69 23 23 CD cord-279343-ybncwweg 79 70 - - SYM cord-279343-ybncwweg 79 71 67 67 CD cord-279343-ybncwweg 79 72 of of IN cord-279343-ybncwweg 79 73 the the DT cord-279343-ybncwweg 79 74 large large JJ cord-279343-ybncwweg 79 75 ribosomal ribosomal JJ cord-279343-ybncwweg 79 76 subunit subunit NN cord-279343-ybncwweg 79 77 from from IN cord-279343-ybncwweg 79 78 Deinococcus Deinococcus NNP cord-279343-ybncwweg 79 79 radiodurans radioduran NNS cord-279343-ybncwweg 79 80 ( ( -LRB- cord-279343-ybncwweg 79 81 PDB PDB NNP cord-279343-ybncwweg 79 82 code code NN cord-279343-ybncwweg 79 83 1NKW 1nkw CD cord-279343-ybncwweg 79 84 ) ) -RRB- cord-279343-ybncwweg 79 85 and and CC cord-279343-ybncwweg 79 86 repeats repeat VBZ cord-279343-ybncwweg 79 87 R6 R6 NNP cord-279343-ybncwweg 79 88 and and CC cord-279343-ybncwweg 79 89 R7 R7 NNP cord-279343-ybncwweg 79 90 , , , cord-279343-ybncwweg 79 91 37 37 CD cord-279343-ybncwweg 79 92 % % NN cord-279343-ybncwweg 79 93 between between IN cord-279343-ybncwweg 79 94 residues residue NNS cord-279343-ybncwweg 79 95 60 60 CD cord-279343-ybncwweg 79 96 - - SYM cord-279343-ybncwweg 79 97 106 106 CD cord-279343-ybncwweg 79 98 of of IN cord-279343-ybncwweg 79 99 the the DT cord-279343-ybncwweg 79 100 monomeric monomeric JJ cord-279343-ybncwweg 79 101 isocitrate isocitrate NN cord-279343-ybncwweg 79 102 dehydrogenase dehydrogenase NN cord-279343-ybncwweg 79 103 ( ( -LRB- cord-279343-ybncwweg 79 104 PDB PDB NNP cord-279343-ybncwweg 79 105 code code NN cord-279343-ybncwweg 79 106 1ITW 1itw CD cord-279343-ybncwweg 79 107 ) ) -RRB- cord-279343-ybncwweg 79 108 and and CC cord-279343-ybncwweg 79 109 repeats repeat VBZ cord-279343-ybncwweg 79 110 R6-R8 R6-R8 NNP cord-279343-ybncwweg 79 111 . . . cord-279343-ybncwweg 80 1 All all DT cord-279343-ybncwweg 80 2 homologous homologous JJ cord-279343-ybncwweg 80 3 structures structure NNS cord-279343-ybncwweg 80 4 are be VBP cord-279343-ybncwweg 80 5 helical helical JJ cord-279343-ybncwweg 80 6 in in IN cord-279343-ybncwweg 80 7 nature nature NN cord-279343-ybncwweg 80 8 . . . cord-279343-ybncwweg 81 1 Both both DT cord-279343-ybncwweg 81 2 homology homology NN cord-279343-ybncwweg 81 3 modeling modeling NN cord-279343-ybncwweg 81 4 and and CC cord-279343-ybncwweg 81 5 sequence sequence NN cord-279343-ybncwweg 81 6 - - HYPH cord-279343-ybncwweg 81 7 based base VBN cord-279343-ybncwweg 81 8 secondary secondary JJ cord-279343-ybncwweg 81 9 structure structure NN cord-279343-ybncwweg 81 10 prediction prediction NN cord-279343-ybncwweg 81 11 resulted result VBD cord-279343-ybncwweg 81 12 in in IN cord-279343-ybncwweg 81 13 similar similar JJ cord-279343-ybncwweg 81 14 secondary secondary JJ cord-279343-ybncwweg 81 15 structure structure NN cord-279343-ybncwweg 81 16 assignment assignment NN cord-279343-ybncwweg 81 17 , , , cord-279343-ybncwweg 81 18 including include VBG cord-279343-ybncwweg 81 19 the the DT cord-279343-ybncwweg 81 20 boundary boundary NN cord-279343-ybncwweg 81 21 of of IN cord-279343-ybncwweg 81 22 helices helix NNS cord-279343-ybncwweg 81 23 , , , cord-279343-ybncwweg 81 24 turns turn VBZ cord-279343-ybncwweg 81 25 and and CC cord-279343-ybncwweg 81 26 loops loop NNS cord-279343-ybncwweg 81 27 throughout throughout IN cord-279343-ybncwweg 81 28 the the DT cord-279343-ybncwweg 81 29 R1-R8 R1-R8 NNPS cord-279343-ybncwweg 81 30 repeat repeat NN cord-279343-ybncwweg 81 31 domain domain NN cord-279343-ybncwweg 81 32 of of IN cord-279343-ybncwweg 81 33 DC DC NNP cord-279343-ybncwweg 81 34 - - HYPH cord-279343-ybncwweg 81 35 SIGNR SIGNR NNP cord-279343-ybncwweg 81 36 . . . cord-279343-ybncwweg 82 1 Additional additional JJ cord-279343-ybncwweg 82 2 structural structural JJ cord-279343-ybncwweg 82 3 information information NN cord-279343-ybncwweg 82 4 derived derive VBN cord-279343-ybncwweg 82 5 from from IN cord-279343-ybncwweg 82 6 gel gel NN cord-279343-ybncwweg 82 7 - - HYPH cord-279343-ybncwweg 82 8 filtration filtration NN cord-279343-ybncwweg 82 9 experiments experiment NNS cord-279343-ybncwweg 82 10 on on IN cord-279343-ybncwweg 82 11 truncated truncated JJ cord-279343-ybncwweg 82 12 receptors receptor NNS cord-279343-ybncwweg 82 13 showing show VBG cord-279343-ybncwweg 82 14 that that IN cord-279343-ybncwweg 82 15 receptor receptor NN cord-279343-ybncwweg 82 16 tetramerization tetramerization NN cord-279343-ybncwweg 82 17 requires require VBZ cord-279343-ybncwweg 82 18 R5-R8 R5-R8 NNP cord-279343-ybncwweg 82 19 repeats repeat VBZ cord-279343-ybncwweg 82 20 and and CC cord-279343-ybncwweg 82 21 analytical analytical JJ cord-279343-ybncwweg 82 22 ultracentrifugation ultracentrifugation NN cord-279343-ybncwweg 82 23 observations observation NNS cord-279343-ybncwweg 82 24 suggesting suggest VBG cord-279343-ybncwweg 82 25 an an DT cord-279343-ybncwweg 82 26 elongated elongated JJ cord-279343-ybncwweg 82 27 shape shape NN cord-279343-ybncwweg 82 28 of of IN cord-279343-ybncwweg 82 29 the the DT cord-279343-ybncwweg 82 30 tetramer tetramer NN cord-279343-ybncwweg 82 31 were be VBD cord-279343-ybncwweg 82 32 included include VBN cord-279343-ybncwweg 82 33 in in IN cord-279343-ybncwweg 82 34 the the DT cord-279343-ybncwweg 82 35 modeling modeling NN cord-279343-ybncwweg 82 36 of of IN cord-279343-ybncwweg 82 37 the the DT cord-279343-ybncwweg 82 38 tetramer tetramer NN cord-279343-ybncwweg 82 39 . . . cord-279343-ybncwweg 83 1 21 21 CD cord-279343-ybncwweg 84 1 Based base VBN cord-279343-ybncwweg 84 2 on on IN cord-279343-ybncwweg 84 3 the the DT cord-279343-ybncwweg 84 4 overlapping overlap VBG cord-279343-ybncwweg 84 5 homologous homologous JJ cord-279343-ybncwweg 84 6 structures structure NNS cord-279343-ybncwweg 84 7 and and CC cord-279343-ybncwweg 84 8 the the DT cord-279343-ybncwweg 84 9 biophysical biophysical JJ cord-279343-ybncwweg 84 10 shape shape NN cord-279343-ybncwweg 84 11 consideration consideration NN cord-279343-ybncwweg 84 12 and and CC cord-279343-ybncwweg 84 13 using use VBG cord-279343-ybncwweg 84 14 the the DT cord-279343-ybncwweg 84 15 focal focal JJ cord-279343-ybncwweg 84 16 adhesion adhesion NN cord-279343-ybncwweg 84 17 kinase kinase NN cord-279343-ybncwweg 84 18 ( ( -LRB- cord-279343-ybncwweg 84 19 PDB PDB NNP cord-279343-ybncwweg 84 20 code code NN cord-279343-ybncwweg 84 21 1K05 1k05 CD cord-279343-ybncwweg 84 22 ) ) -RRB- cord-279343-ybncwweg 84 23 as as IN cord-279343-ybncwweg 84 24 a a DT cord-279343-ybncwweg 84 25 template template NN cord-279343-ybncwweg 84 26 ( ( -LRB- cord-279343-ybncwweg 84 27 Supplementary Supplementary NNP cord-279343-ybncwweg 84 28 Data Data NNP cord-279343-ybncwweg 84 29 Figure Figure NNP cord-279343-ybncwweg 84 30 1 1 CD cord-279343-ybncwweg 84 31 ) ) -RRB- cord-279343-ybncwweg 84 32 , , , cord-279343-ybncwweg 84 33 a a DT cord-279343-ybncwweg 84 34 polyalanine polyalanine NN cord-279343-ybncwweg 84 35 model model NN cord-279343-ybncwweg 84 36 of of IN cord-279343-ybncwweg 84 37 DC DC NNP cord-279343-ybncwweg 84 38 - - HYPH cord-279343-ybncwweg 84 39 SIGNR SIGNR NNP cord-279343-ybncwweg 84 40 tetramer tetramer NN cord-279343-ybncwweg 84 41 was be VBD cord-279343-ybncwweg 84 42 built build VBN cord-279343-ybncwweg 84 43 manually manually RB cord-279343-ybncwweg 84 44 using use VBG cord-279343-ybncwweg 84 45 the the DT cord-279343-ybncwweg 84 46 crystallographic crystallographic JJ cord-279343-ybncwweg 84 47 program program NN cord-279343-ybncwweg 84 48 O o NN cord-279343-ybncwweg 84 49 and and CC cord-279343-ybncwweg 84 50 subjected subject VBN cord-279343-ybncwweg 84 51 to to IN cord-279343-ybncwweg 84 52 energy energy NN cord-279343-ybncwweg 84 53 minimization minimization NN cord-279343-ybncwweg 84 54 using use VBG cord-279343-ybncwweg 84 55 CNS CNS NNP cord-279343-ybncwweg 84 56 ( ( -LRB- cord-279343-ybncwweg 84 57 Figure figure NN cord-279343-ybncwweg 84 58 4 4 CD cord-279343-ybncwweg 84 59 ) ) -RRB- cord-279343-ybncwweg 84 60 . . . cord-279343-ybncwweg 85 1 The the DT cord-279343-ybncwweg 85 2 tetramer tetramer NN cord-279343-ybncwweg 85 3 model model NN cord-279343-ybncwweg 85 4 displays display VBZ cord-279343-ybncwweg 85 5 a a DT cord-279343-ybncwweg 85 6 4-fold 4-fold CD cord-279343-ybncwweg 85 7 symmetry symmetry NN cord-279343-ybncwweg 85 8 , , , cord-279343-ybncwweg 85 9 with with IN cord-279343-ybncwweg 85 10 the the DT cord-279343-ybncwweg 85 11 core core NN cord-279343-ybncwweg 85 12 tetramerization tetramerization NN cord-279343-ybncwweg 85 13 domain domain NN cord-279343-ybncwweg 85 14 adopting adopt VBG cord-279343-ybncwweg 85 15 a a DT cord-279343-ybncwweg 85 16 four four CD cord-279343-ybncwweg 85 17 - - HYPH cord-279343-ybncwweg 85 18 helix helix NN cord-279343-ybncwweg 85 19 bundle bundle NN cord-279343-ybncwweg 85 20 structure structure NN cord-279343-ybncwweg 85 21 similar similar JJ cord-279343-ybncwweg 85 22 to to IN cord-279343-ybncwweg 85 23 that that DT cord-279343-ybncwweg 85 24 of of IN cord-279343-ybncwweg 85 25 the the DT cord-279343-ybncwweg 85 26 focal focal JJ cord-279343-ybncwweg 85 27 adhesion adhesion NN cord-279343-ybncwweg 85 28 kinase kinase NN cord-279343-ybncwweg 85 29 ( ( -LRB- cord-279343-ybncwweg 85 30 see see VB cord-279343-ybncwweg 85 31 Supplementary Supplementary NNP cord-279343-ybncwweg 85 32 Data Data NNP cord-279343-ybncwweg 85 33 for for IN cord-279343-ybncwweg 85 34 a a DT cord-279343-ybncwweg 85 35 more more RBR cord-279343-ybncwweg 85 36 detailed detailed JJ cord-279343-ybncwweg 85 37 description description NN cord-279343-ybncwweg 85 38 of of IN cord-279343-ybncwweg 85 39 the the DT cord-279343-ybncwweg 85 40 model model NN cord-279343-ybncwweg 85 41 ) ) -RRB- cord-279343-ybncwweg 85 42 . . . cord-279343-ybncwweg 86 1 The the DT cord-279343-ybncwweg 86 2 arrangement arrangement NN cord-279343-ybncwweg 86 3 of of IN cord-279343-ybncwweg 86 4 the the DT cord-279343-ybncwweg 86 5 R7 R7 NNP cord-279343-ybncwweg 86 6 and and CC cord-279343-ybncwweg 86 7 R8 R8 NNP cord-279343-ybncwweg 86 8 helices helix NNS cord-279343-ybncwweg 86 9 in in IN cord-279343-ybncwweg 86 10 this this DT cord-279343-ybncwweg 86 11 model model NN cord-279343-ybncwweg 86 12 agree agree VBP cord-279343-ybncwweg 86 13 with with IN cord-279343-ybncwweg 86 14 the the DT cord-279343-ybncwweg 86 15 recently recently RB cord-279343-ybncwweg 86 16 deposited deposit VBN cord-279343-ybncwweg 86 17 structure structure NN cord-279343-ybncwweg 86 18 of of IN cord-279343-ybncwweg 86 19 DC DC NNP cord-279343-ybncwweg 86 20 - - HYPH cord-279343-ybncwweg 86 21 SIGNR SIGNR NNP cord-279343-ybncwweg 86 22 containing contain VBG cord-279343-ybncwweg 86 23 both both CC cord-279343-ybncwweg 86 24 R7 R7 NNP cord-279343-ybncwweg 86 25 and and CC cord-279343-ybncwweg 86 26 R8 R8 NNP cord-279343-ybncwweg 86 27 repeats repeat VBZ cord-279343-ybncwweg 86 28 ( ( -LRB- cord-279343-ybncwweg 87 1 PDB PDB NNP cord-279343-ybncwweg 87 2 code code NN cord-279343-ybncwweg 87 3 1SL6 1sl6 CD cord-279343-ybncwweg 87 4 ) ) -RRB- cord-279343-ybncwweg 87 5 . . . cord-279343-ybncwweg 88 1 22 22 CD cord-279343-ybncwweg 89 1 The the DT cord-279343-ybncwweg 89 2 dimensions dimension NNS cord-279343-ybncwweg 89 3 of of IN cord-279343-ybncwweg 89 4 the the DT cord-279343-ybncwweg 89 5 model model NN cord-279343-ybncwweg 89 6 proposed propose VBN cord-279343-ybncwweg 89 7 here here RB cord-279343-ybncwweg 89 8 are be VBP cord-279343-ybncwweg 89 9 w80 w80 NN cord-279343-ybncwweg 89 10 Å å NN cord-279343-ybncwweg 89 11 ! ! . cord-279343-ybncwweg 89 12 80 80 CD cord-279343-ybncwweg 89 13 Å å NN cord-279343-ybncwweg 89 14 ! ! . cord-279343-ybncwweg 89 15 190 190 CD cord-279343-ybncwweg 89 16 Å å NN cord-279343-ybncwweg 89 17 with with IN cord-279343-ybncwweg 89 18 individual individual JJ cord-279343-ybncwweg 89 19 CRD crd NN cord-279343-ybncwweg 89 20 separated separate VBN cord-279343-ybncwweg 89 21 by by IN cord-279343-ybncwweg 89 22 w50 w50 NNP cord-279343-ybncwweg 89 23 Å Å NNP cord-279343-ybncwweg 89 24 . . . cord-279343-ybncwweg 90 1 On on IN cord-279343-ybncwweg 90 2 the the DT cord-279343-ybncwweg 90 3 Table table NN cord-279343-ybncwweg 90 4 2 2 CD cord-279343-ybncwweg 90 5 . . . cord-279343-ybncwweg 91 1 We -PRON- PRP cord-279343-ybncwweg 91 2 carried carry VBD cord-279343-ybncwweg 91 3 out out RP cord-279343-ybncwweg 91 4 limited limited JJ cord-279343-ybncwweg 91 5 proteolysis proteolysis NN cord-279343-ybncwweg 91 6 using use VBG cord-279343-ybncwweg 91 7 trypsin trypsin NN cord-279343-ybncwweg 91 8 to to TO cord-279343-ybncwweg 91 9 explore explore VB cord-279343-ybncwweg 91 10 the the DT cord-279343-ybncwweg 91 11 likelihood likelihood NN cord-279343-ybncwweg 91 12 of of IN cord-279343-ybncwweg 91 13 the the DT cord-279343-ybncwweg 91 14 proposed propose VBN cord-279343-ybncwweg 91 15 model model NN cord-279343-ybncwweg 91 16 of of IN cord-279343-ybncwweg 91 17 helical helical JJ cord-279343-ybncwweg 91 18 repeat repeat NN cord-279343-ybncwweg 91 19 bundles bundle NNS cord-279343-ybncwweg 91 20 for for IN cord-279343-ybncwweg 91 21 the the DT cord-279343-ybncwweg 91 22 tetrameric tetrameric JJ cord-279343-ybncwweg 91 23 DC DC NNP cord-279343-ybncwweg 91 24 - - HYPH cord-279343-ybncwweg 91 25 SIGNR SIGNR NNP cord-279343-ybncwweg 91 26 versus versus IN cord-279343-ybncwweg 91 27 a a DT cord-279343-ybncwweg 91 28 model model NN cord-279343-ybncwweg 91 29 consisting consist VBG cord-279343-ybncwweg 91 30 of of IN cord-279343-ybncwweg 91 31 an an DT cord-279343-ybncwweg 91 32 elongated elongated JJ cord-279343-ybncwweg 91 33 linear linear JJ cord-279343-ybncwweg 91 34 concatenation concatenation NN cord-279343-ybncwweg 91 35 of of IN cord-279343-ybncwweg 91 36 helical helical JJ cord-279343-ybncwweg 91 37 repeats repeat NNS cord-279343-ybncwweg 91 38 ( ( -LRB- cord-279343-ybncwweg 91 39 Figure figure NN cord-279343-ybncwweg 91 40 4 4 CD cord-279343-ybncwweg 91 41 ) ) -RRB- cord-279343-ybncwweg 91 42 . . . cord-279343-ybncwweg 92 1 Since since IN cord-279343-ybncwweg 92 2 identical identical JJ cord-279343-ybncwweg 92 3 trypsin trypsin NN cord-279343-ybncwweg 92 4 digestion digestion NN cord-279343-ybncwweg 92 5 sites site NNS cord-279343-ybncwweg 92 6 are be VBP cord-279343-ybncwweg 92 7 found find VBN cord-279343-ybncwweg 92 8 within within IN cord-279343-ybncwweg 92 9 each each DT cord-279343-ybncwweg 92 10 repeat repeat NN cord-279343-ybncwweg 92 11 region region NN cord-279343-ybncwweg 92 12 , , , cord-279343-ybncwweg 92 13 a a DT cord-279343-ybncwweg 92 14 differential differential JJ cord-279343-ybncwweg 92 15 use use NN cord-279343-ybncwweg 92 16 of of IN cord-279343-ybncwweg 92 17 each each DT cord-279343-ybncwweg 92 18 potential potential JJ cord-279343-ybncwweg 92 19 trypsin trypsin NN cord-279343-ybncwweg 92 20 site site NN cord-279343-ybncwweg 92 21 would would MD cord-279343-ybncwweg 92 22 suggest suggest VB cord-279343-ybncwweg 92 23 differential differential JJ cord-279343-ybncwweg 92 24 protection protection NN cord-279343-ybncwweg 92 25 from from IN cord-279343-ybncwweg 92 26 the the DT cord-279343-ybncwweg 92 27 protease protease NN cord-279343-ybncwweg 92 28 . . . cord-279343-ybncwweg 93 1 The the DT cord-279343-ybncwweg 93 2 tight tight JJ cord-279343-ybncwweg 93 3 packing packing NN cord-279343-ybncwweg 93 4 of of IN cord-279343-ybncwweg 93 5 the the DT cord-279343-ybncwweg 93 6 proposed propose VBN cord-279343-ybncwweg 93 7 model model NN cord-279343-ybncwweg 93 8 predicts predict VBZ cord-279343-ybncwweg 93 9 a a DT cord-279343-ybncwweg 93 10 biased biased JJ cord-279343-ybncwweg 93 11 protease protease NN cord-279343-ybncwweg 93 12 - - HYPH cord-279343-ybncwweg 93 13 sensitivity sensitivity NN cord-279343-ybncwweg 93 14 for for IN cord-279343-ybncwweg 93 15 the the DT cord-279343-ybncwweg 93 16 different different JJ cord-279343-ybncwweg 93 17 repeats repeat NNS cord-279343-ybncwweg 93 18 with with IN cord-279343-ybncwweg 93 19 the the DT cord-279343-ybncwweg 93 20 core core NN cord-279343-ybncwweg 93 21 tetramer tetramer NN cord-279343-ybncwweg 93 22 packing packing NN cord-279343-ybncwweg 93 23 repeats repeat VBZ cord-279343-ybncwweg 93 24 less less RBR cord-279343-ybncwweg 93 25 accessible accessible JJ cord-279343-ybncwweg 93 26 than than IN cord-279343-ybncwweg 93 27 the the DT cord-279343-ybncwweg 93 28 peripheral peripheral JJ cord-279343-ybncwweg 93 29 repeats repeat NNS cord-279343-ybncwweg 93 30 , , , cord-279343-ybncwweg 93 31 while while IN cord-279343-ybncwweg 93 32 the the DT cord-279343-ybncwweg 93 33 linear linear JJ cord-279343-ybncwweg 93 34 helical helical JJ cord-279343-ybncwweg 93 35 concatenation concatenation NN cord-279343-ybncwweg 93 36 model model NN cord-279343-ybncwweg 93 37 predicts predict VBZ cord-279343-ybncwweg 93 38 an an DT cord-279343-ybncwweg 93 39 equal equal JJ cord-279343-ybncwweg 93 40 proteasesensitivity proteasesensitivity NN cord-279343-ybncwweg 93 41 for for IN cord-279343-ybncwweg 93 42 each each DT cord-279343-ybncwweg 93 43 repeat repeat NN cord-279343-ybncwweg 93 44 . . . cord-279343-ybncwweg 94 1 The the DT cord-279343-ybncwweg 94 2 digestion digestion NN cord-279343-ybncwweg 94 3 with with IN cord-279343-ybncwweg 94 4 trypsin trypsin NN cord-279343-ybncwweg 94 5 was be VBD cord-279343-ybncwweg 94 6 carried carry VBN cord-279343-ybncwweg 94 7 out out RP cord-279343-ybncwweg 94 8 using use VBG cord-279343-ybncwweg 94 9 a a DT cord-279343-ybncwweg 94 10 recombinant recombinant NN cord-279343-ybncwweg 94 11 expressed express VBN cord-279343-ybncwweg 94 12 and and CC cord-279343-ybncwweg 94 13 refolded refolde VBN cord-279343-ybncwweg 94 14 full full JJ cord-279343-ybncwweg 94 15 extracellular extracellular JJ cord-279343-ybncwweg 94 16 DC DC NNP cord-279343-ybncwweg 94 17 - - HYPH cord-279343-ybncwweg 94 18 SIGNR SIGNR NNP cord-279343-ybncwweg 94 19 , , , cord-279343-ybncwweg 94 20 termed term VBD cord-279343-ybncwweg 94 21 DC DC NNP cord-279343-ybncwweg 94 22 - - HYPH cord-279343-ybncwweg 94 23 SIGNR SIGNR NNP cord-279343-ybncwweg 94 24 R1 R1 NNP cord-279343-ybncwweg 94 25 , , , cord-279343-ybncwweg 94 26 that that WDT cord-279343-ybncwweg 94 27 has have VBZ cord-279343-ybncwweg 94 28 been be VBN cord-279343-ybncwweg 94 29 characterized characterize VBN cord-279343-ybncwweg 94 30 to to TO cord-279343-ybncwweg 94 31 be be VB cord-279343-ybncwweg 94 32 a a DT cord-279343-ybncwweg 94 33 tetramer tetramer NN cord-279343-ybncwweg 94 34 . . . cord-279343-ybncwweg 95 1 21 21 CD cord-279343-ybncwweg 95 2 Digestion digestion NN cord-279343-ybncwweg 95 3 of of IN cord-279343-ybncwweg 95 4 DC DC NNP cord-279343-ybncwweg 95 5 - - HYPH cord-279343-ybncwweg 95 6 SIGNR SIGNR NNP cord-279343-ybncwweg 95 7 R1 r1 NN cord-279343-ybncwweg 95 8 with with IN cord-279343-ybncwweg 95 9 trypsin trypsin NN cord-279343-ybncwweg 95 10 resulted result VBD cord-279343-ybncwweg 95 11 in in IN cord-279343-ybncwweg 95 12 four four CD cord-279343-ybncwweg 95 13 major major JJ cord-279343-ybncwweg 95 14 fragments fragment NNS cord-279343-ybncwweg 95 15 F1w25 F1w25 NNP cord-279343-ybncwweg 95 16 kDa kDa NNP cord-279343-ybncwweg 95 17 , , , cord-279343-ybncwweg 95 18 F2w9 F2w9 NNP cord-279343-ybncwweg 95 19 kDa kDa NNP cord-279343-ybncwweg 95 20 8 8 CD cord-279343-ybncwweg 95 21 , , , cord-279343-ybncwweg 95 22 F3w19 F3w19 NNP cord-279343-ybncwweg 95 23 kDa kDa NNP cord-279343-ybncwweg 95 24 , , , cord-279343-ybncwweg 95 25 and and CC cord-279343-ybncwweg 95 26 F4w7 F4w7 NNP cord-279343-ybncwweg 95 27 kDa kDa NNP cord-279343-ybncwweg 95 28 , , , cord-279343-ybncwweg 95 29 with with IN cord-279343-ybncwweg 95 30 the the DT cord-279343-ybncwweg 95 31 F1 F1 NNP cord-279343-ybncwweg 95 32 and and CC cord-279343-ybncwweg 95 33 F2 f2 NN cord-279343-ybncwweg 95 34 appearing appear VBG cord-279343-ybncwweg 95 35 before before IN cord-279343-ybncwweg 95 36 F3 F3 NNP cord-279343-ybncwweg 95 37 and and CC cord-279343-ybncwweg 95 38 F4 F4 NNP cord-279343-ybncwweg 95 39 in in IN cord-279343-ybncwweg 95 40 time time NN cord-279343-ybncwweg 95 41 - - HYPH cord-279343-ybncwweg 95 42 based base VBN cord-279343-ybncwweg 95 43 digestions digestion NNS cord-279343-ybncwweg 95 44 ( ( -LRB- cord-279343-ybncwweg 95 45 Supplementary Supplementary NNP cord-279343-ybncwweg 95 46 Data Data NNP cord-279343-ybncwweg 95 47 Figure Figure NNP cord-279343-ybncwweg 95 48 3 3 CD cord-279343-ybncwweg 95 49 ) ) -RRB- cord-279343-ybncwweg 95 50 . . . cord-279343-ybncwweg 96 1 No no DT cord-279343-ybncwweg 96 2 other other JJ cord-279343-ybncwweg 96 3 intermediate intermediate JJ cord-279343-ybncwweg 96 4 fragment fragment NN cord-279343-ybncwweg 96 5 could could MD cord-279343-ybncwweg 96 6 be be VB cord-279343-ybncwweg 96 7 identified identify VBN cord-279343-ybncwweg 96 8 . . . cord-279343-ybncwweg 97 1 The the DT cord-279343-ybncwweg 97 2 amino amino NN cord-279343-ybncwweg 97 3 - - HYPH cord-279343-ybncwweg 97 4 terminal terminal NN cord-279343-ybncwweg 97 5 sequencing sequencing NN cord-279343-ybncwweg 97 6 revealed reveal VBD cord-279343-ybncwweg 97 7 fragments fragment NNS cord-279343-ybncwweg 97 8 F1 F1 NNP cord-279343-ybncwweg 97 9 ( ( -LRB- cord-279343-ybncwweg 97 10 residues residue NNS cord-279343-ybncwweg 97 11 14 14 CD cord-279343-ybncwweg 97 12 - - SYM cord-279343-ybncwweg 97 13 237 237 CD cord-279343-ybncwweg 97 14 ) ) -RRB- cord-279343-ybncwweg 97 15 and and CC cord-279343-ybncwweg 97 16 F2 f2 NN cord-279343-ybncwweg 97 17 ( ( -LRB- cord-279343-ybncwweg 97 18 residues residue NNS cord-279343-ybncwweg 97 19 238 238 CD cord-279343-ybncwweg 97 20 - - HYPH cord-279343-ybncwweg 97 21 313 313 CD cord-279343-ybncwweg 97 22 ) ) -RRB- cord-279343-ybncwweg 97 23 resulting result VBG cord-279343-ybncwweg 97 24 from from IN cord-279343-ybncwweg 97 25 cleavages cleavage NNS cord-279343-ybncwweg 97 26 at at IN cord-279343-ybncwweg 97 27 trypsin trypsin NN cord-279343-ybncwweg 97 28 sites site NNS cord-279343-ybncwweg 97 29 between between IN cord-279343-ybncwweg 97 30 repeats repeat VBZ cord-279343-ybncwweg 97 31 R1 R1 NNP cord-279343-ybncwweg 97 32 and and CC cord-279343-ybncwweg 97 33 R2 R2 NNP cord-279343-ybncwweg 97 34 ( ( -LRB- cord-279343-ybncwweg 97 35 site site NN cord-279343-ybncwweg 97 36 1 1 CD cord-279343-ybncwweg 97 37 ) ) -RRB- cord-279343-ybncwweg 97 38 and and CC cord-279343-ybncwweg 97 39 within within IN cord-279343-ybncwweg 97 40 the the DT cord-279343-ybncwweg 97 41 CRD crd NN cord-279343-ybncwweg 97 42 ( ( -LRB- cord-279343-ybncwweg 97 43 site site NN cord-279343-ybncwweg 97 44 3 3 CD cord-279343-ybncwweg 97 45 ) ) -RRB- cord-279343-ybncwweg 97 46 . . . cord-279343-ybncwweg 98 1 Fragments fragment NNS cord-279343-ybncwweg 98 2 F3 F3 NNP cord-279343-ybncwweg 98 3 ( ( -LRB- cord-279343-ybncwweg 98 4 residues residue NNS cord-279343-ybncwweg 98 5 14 14 CD cord-279343-ybncwweg 98 6 - - SYM cord-279343-ybncwweg 98 7 179 179 CD cord-279343-ybncwweg 98 8 ) ) -RRB- cord-279343-ybncwweg 98 9 and and CC cord-279343-ybncwweg 98 10 F4 F4 NNP cord-279343-ybncwweg 98 11 ( ( -LRB- cord-279343-ybncwweg 98 12 residues residue VBZ cord-279343-ybncwweg 98 13 270 270 CD cord-279343-ybncwweg 98 14 - - SYM cord-279343-ybncwweg 98 15 313 313 CD cord-279343-ybncwweg 98 16 ) ) -RRB- cord-279343-ybncwweg 98 17 appeared appear VBD cord-279343-ybncwweg 98 18 to to TO cord-279343-ybncwweg 98 19 be be VB cord-279343-ybncwweg 98 20 derived derive VBN cord-279343-ybncwweg 98 21 from from IN cord-279343-ybncwweg 98 22 F1 f1 NN cord-279343-ybncwweg 98 23 and and CC cord-279343-ybncwweg 98 24 F2 f2 NN cord-279343-ybncwweg 98 25 by by IN cord-279343-ybncwweg 98 26 further further RB cord-279343-ybncwweg 98 27 digesting digest VBG cord-279343-ybncwweg 98 28 at at IN cord-279343-ybncwweg 98 29 site site NN cord-279343-ybncwweg 98 30 3 3 CD cord-279343-ybncwweg 98 31 and and CC cord-279343-ybncwweg 98 32 4 4 CD cord-279343-ybncwweg 98 33 , , , cord-279343-ybncwweg 98 34 respectively respectively RB cord-279343-ybncwweg 98 35 ( ( -LRB- cord-279343-ybncwweg 98 36 Figure figure NN cord-279343-ybncwweg 98 37 1 1 CD cord-279343-ybncwweg 98 38 ) ) -RRB- cord-279343-ybncwweg 98 39 . . . cord-279343-ybncwweg 99 1 These these DT cord-279343-ybncwweg 99 2 results result NNS cord-279343-ybncwweg 99 3 indicate indicate VBP cord-279343-ybncwweg 99 4 that that IN cord-279343-ybncwweg 99 5 most most JJS cord-279343-ybncwweg 99 6 of of IN cord-279343-ybncwweg 99 7 the the DT cord-279343-ybncwweg 99 8 tetramerization tetramerization NN cord-279343-ybncwweg 99 9 repeats repeat VBZ cord-279343-ybncwweg 99 10 ( ( -LRB- cord-279343-ybncwweg 99 11 R2-R8 R2-R8 NNP cord-279343-ybncwweg 99 12 ) ) -RRB- cord-279343-ybncwweg 99 13 remain remain VBP cord-279343-ybncwweg 99 14 resistant resistant JJ cord-279343-ybncwweg 99 15 to to IN cord-279343-ybncwweg 99 16 digestion digestion NN cord-279343-ybncwweg 99 17 by by IN cord-279343-ybncwweg 99 18 trypsin trypsin NN cord-279343-ybncwweg 99 19 , , , cord-279343-ybncwweg 99 20 consistent consistent JJ cord-279343-ybncwweg 99 21 with with IN cord-279343-ybncwweg 99 22 it -PRON- PRP cord-279343-ybncwweg 99 23 being be VBG cord-279343-ybncwweg 99 24 a a DT cord-279343-ybncwweg 99 25 compact compact JJ cord-279343-ybncwweg 99 26 tetramer tetramer NN cord-279343-ybncwweg 99 27 unit unit NN cord-279343-ybncwweg 99 28 rather rather RB cord-279343-ybncwweg 99 29 than than IN cord-279343-ybncwweg 99 30 an an DT cord-279343-ybncwweg 99 31 elongated elongated JJ cord-279343-ybncwweg 99 32 linear linear JJ cord-279343-ybncwweg 99 33 helical helical JJ cord-279343-ybncwweg 99 34 tetramer tetramer NN cord-279343-ybncwweg 99 35 in in IN cord-279343-ybncwweg 99 36 which which WDT cord-279343-ybncwweg 99 37 all all DT cord-279343-ybncwweg 99 38 repeats repeat NNS cord-279343-ybncwweg 99 39 appear appear VBP cord-279343-ybncwweg 99 40 equally equally RB cord-279343-ybncwweg 99 41 susceptible susceptible JJ cord-279343-ybncwweg 99 42 to to IN cord-279343-ybncwweg 99 43 protease protease NN cord-279343-ybncwweg 99 44 . . . cord-279343-ybncwweg 100 1 Digestion digestion NN cord-279343-ybncwweg 100 2 experiments experiment NNS cord-279343-ybncwweg 100 3 with with IN cord-279343-ybncwweg 100 4 subtilisin subtilisin NNS cord-279343-ybncwweg 100 5 are be VBP cord-279343-ybncwweg 100 6 consistent consistent JJ cord-279343-ybncwweg 100 7 with with IN cord-279343-ybncwweg 100 8 these these DT cord-279343-ybncwweg 100 9 results result NNS cord-279343-ybncwweg 100 10 , , , cord-279343-ybncwweg 100 11 indicating indicate VBG cord-279343-ybncwweg 100 12 protease protease NN cord-279343-ybncwweg 100 13 - - HYPH cord-279343-ybncwweg 100 14 sensitive sensitive JJ cord-279343-ybncwweg 100 15 sites site NNS cord-279343-ybncwweg 100 16 being be VBG cord-279343-ybncwweg 100 17 primarily primarily RB cord-279343-ybncwweg 100 18 between between IN cord-279343-ybncwweg 100 19 repeats repeat VBZ cord-279343-ybncwweg 100 20 R1 R1 NNP cord-279343-ybncwweg 100 21 and and CC cord-279343-ybncwweg 100 22 R2 R2 NNP cord-279343-ybncwweg 100 23 , , , cord-279343-ybncwweg 100 24 and and CC cord-279343-ybncwweg 100 25 after after IN cord-279343-ybncwweg 100 26 the the DT cord-279343-ybncwweg 100 27 helical helical JJ cord-279343-ybncwweg 100 28 repeat repeat NN cord-279343-ybncwweg 100 29 domain domain NN cord-279343-ybncwweg 100 30 at at IN cord-279343-ybncwweg 100 31 the the DT cord-279343-ybncwweg 100 32 beginning beginning NN cord-279343-ybncwweg 100 33 of of IN cord-279343-ybncwweg 100 34 the the DT cord-279343-ybncwweg 100 35 CRD CRD NNP cord-279343-ybncwweg 100 36 region region NN cord-279343-ybncwweg 100 37 . . . cord-279343-ybncwweg 101 1 22 22 CD cord-279343-ybncwweg 101 2 Evaluating evaluate VBG cord-279343-ybncwweg 101 3 potential potential JJ cord-279343-ybncwweg 101 4 DC DC NNP cord-279343-ybncwweg 101 5 - - HYPH cord-279343-ybncwweg 101 6 SIGN sign NN cord-279343-ybncwweg 101 7 / / SYM cord-279343-ybncwweg 101 8 R r NN cord-279343-ybncwweg 101 9 ligands ligand NNS cord-279343-ybncwweg 102 1 Earlier early JJR cord-279343-ybncwweg 102 2 studies study NNS cord-279343-ybncwweg 102 3 of of IN cord-279343-ybncwweg 102 4 the the DT cord-279343-ybncwweg 102 5 DC DC NNP cord-279343-ybncwweg 102 6 - - HYPH cord-279343-ybncwweg 102 7 SIGN SIGN NNP cord-279343-ybncwweg 102 8 / / SYM cord-279343-ybncwweg 102 9 R r NN cord-279343-ybncwweg 102 10 CRD crd NN cord-279343-ybncwweg 102 11 binding bind VBG cord-279343-ybncwweg 102 12 to to IN cord-279343-ybncwweg 102 13 model model NN cord-279343-ybncwweg 102 14 carbohydrate carbohydrate NN cord-279343-ybncwweg 102 15 compounds compound NNS cord-279343-ybncwweg 102 16 suggest suggest VBP cord-279343-ybncwweg 102 17 that that IN cord-279343-ybncwweg 102 18 the the DT cord-279343-ybncwweg 102 19 receptors receptor NNS cord-279343-ybncwweg 102 20 prefer prefer VBP cord-279343-ybncwweg 102 21 a a DT cord-279343-ybncwweg 102 22 high high JJ cord-279343-ybncwweg 102 23 - - HYPH cord-279343-ybncwweg 102 24 mannose mannose NN cord-279343-ybncwweg 102 25 type type NN cord-279343-ybncwweg 102 26 of of IN cord-279343-ybncwweg 102 27 carbohydrate carbohydrate NN cord-279343-ybncwweg 102 28 . . . cord-279343-ybncwweg 103 1 17 17 CD cord-279343-ybncwweg 103 2 , , , cord-279343-ybncwweg 103 3 18 18 CD cord-279343-ybncwweg 103 4 , , , cord-279343-ybncwweg 104 1 26 26 CD cord-279343-ybncwweg 104 2 More more RBR cord-279343-ybncwweg 104 3 recently recently RB cord-279343-ybncwweg 104 4 , , , cord-279343-ybncwweg 104 5 the the DT cord-279343-ybncwweg 104 6 receptors receptor NNS cord-279343-ybncwweg 104 7 were be VBD cord-279343-ybncwweg 104 8 shown show VBN cord-279343-ybncwweg 104 9 to to TO cord-279343-ybncwweg 104 10 recognize recognize VB cord-279343-ybncwweg 104 11 also also RB cord-279343-ybncwweg 104 12 sialyl sialyl NNP cord-279343-ybncwweg 104 13 - - HYPH cord-279343-ybncwweg 104 14 Lewis Lewis NNP cord-279343-ybncwweg 104 15 - - HYPH cord-279343-ybncwweg 104 16 like like JJ cord-279343-ybncwweg 104 17 carbohydrates carbohydrate NNS cord-279343-ybncwweg 104 18 . . . cord-279343-ybncwweg 105 1 19 19 CD cord-279343-ybncwweg 106 1 The the DT cord-279343-ybncwweg 106 2 dissociation dissociation NN cord-279343-ybncwweg 106 3 constant constant NN cord-279343-ybncwweg 106 4 ( ( -LRB- cord-279343-ybncwweg 106 5 K K NNP cord-279343-ybncwweg 106 6 d d NNP cord-279343-ybncwweg 106 7 ) ) -RRB- cord-279343-ybncwweg 106 8 between between IN cord-279343-ybncwweg 106 9 DC DC NNP cord-279343-ybncwweg 106 10 - - HYPH cord-279343-ybncwweg 106 11 SIGN SIGN NNP cord-279343-ybncwweg 106 12 / / SYM cord-279343-ybncwweg 106 13 R R NNP cord-279343-ybncwweg 106 14 CRD crd NN cord-279343-ybncwweg 106 15 and and CC cord-279343-ybncwweg 106 16 the the DT cord-279343-ybncwweg 106 17 model model NN cord-279343-ybncwweg 106 18 compounds compound NNS cord-279343-ybncwweg 106 19 , , , cord-279343-ybncwweg 106 20 however however RB cord-279343-ybncwweg 106 21 , , , cord-279343-ybncwweg 106 22 are be VBP cord-279343-ybncwweg 106 23 millimolar millimolar JJ cord-279343-ybncwweg 106 24 at at IN cord-279343-ybncwweg 106 25 best well RBS cord-279343-ybncwweg 106 26 , , , cord-279343-ybncwweg 106 27 while while IN cord-279343-ybncwweg 106 28 the the DT cord-279343-ybncwweg 106 29 functional functional JJ cord-279343-ybncwweg 106 30 ligand ligand NN cord-279343-ybncwweg 106 31 recognition recognition NN cord-279343-ybncwweg 106 32 by by IN cord-279343-ybncwweg 106 33 the the DT cord-279343-ybncwweg 106 34 receptor receptor NN cord-279343-ybncwweg 106 35 has have VBZ cord-279343-ybncwweg 106 36 better well JJR cord-279343-ybncwweg 106 37 than than IN cord-279343-ybncwweg 106 38 micromolar micromolar JJ cord-279343-ybncwweg 106 39 affinity affinity NN cord-279343-ybncwweg 106 40 . . . cord-279343-ybncwweg 107 1 Thus thus RB cord-279343-ybncwweg 107 2 , , , cord-279343-ybncwweg 107 3 much much JJ cord-279343-ybncwweg 107 4 of of IN cord-279343-ybncwweg 107 5 the the DT cord-279343-ybncwweg 107 6 receptorligand receptorligand NN cord-279343-ybncwweg 107 7 binding bind VBG cord-279343-ybncwweg 107 8 affinity affinity NN cord-279343-ybncwweg 107 9 appears appear VBZ cord-279343-ybncwweg 107 10 to to TO cord-279343-ybncwweg 107 11 be be VB cord-279343-ybncwweg 107 12 derived derive VBN cord-279343-ybncwweg 107 13 from from IN cord-279343-ybncwweg 107 14 an an DT cord-279343-ybncwweg 107 15 avidity avidity NN cord-279343-ybncwweg 107 16 effect effect NN cord-279343-ybncwweg 107 17 of of IN cord-279343-ybncwweg 107 18 the the DT cord-279343-ybncwweg 107 19 DC DC NNP cord-279343-ybncwweg 107 20 - - HYPH cord-279343-ybncwweg 107 21 SIGN SIGN NNP cord-279343-ybncwweg 107 22 / / SYM cord-279343-ybncwweg 107 23 R r NN cord-279343-ybncwweg 107 24 tetramer tetramer NN cord-279343-ybncwweg 107 25 . . . cord-279343-ybncwweg 108 1 The the DT cord-279343-ybncwweg 108 2 requirement requirement NN cord-279343-ybncwweg 108 3 of of IN cord-279343-ybncwweg 108 4 tetramer tetramer NN cord-279343-ybncwweg 108 5 binding bind VBG cord-279343-ybncwweg 108 6 for for IN cord-279343-ybncwweg 108 7 ligand ligand NN cord-279343-ybncwweg 108 8 recognition recognition NN cord-279343-ybncwweg 108 9 would would MD cord-279343-ybncwweg 108 10 , , , cord-279343-ybncwweg 108 11 in in IN cord-279343-ybncwweg 108 12 turn turn NN cord-279343-ybncwweg 108 13 , , , cord-279343-ybncwweg 108 14 impose impose VB cord-279343-ybncwweg 108 15 limitations limitation NNS cord-279343-ybncwweg 108 16 to to IN cord-279343-ybncwweg 108 17 its -PRON- PRP$ cord-279343-ybncwweg 108 18 ligand ligand NN cord-279343-ybncwweg 108 19 selection selection NN cord-279343-ybncwweg 108 20 . . . cord-279343-ybncwweg 109 1 Namely namely RB cord-279343-ybncwweg 109 2 , , , cord-279343-ybncwweg 109 3 ligands ligand NNS cord-279343-ybncwweg 109 4 carrying carry VBG cord-279343-ybncwweg 109 5 multiple multiple JJ cord-279343-ybncwweg 109 6 glycosylations glycosylation NNS cord-279343-ybncwweg 109 7 capable capable JJ cord-279343-ybncwweg 109 8 of of IN cord-279343-ybncwweg 109 9 engaging engage VBG cord-279343-ybncwweg 109 10 the the DT cord-279343-ybncwweg 109 11 multimeric multimeric JJ cord-279343-ybncwweg 109 12 DC DC NNP cord-279343-ybncwweg 109 13 - - HYPH cord-279343-ybncwweg 109 14 SIGN SIGN NNP cord-279343-ybncwweg 109 15 / / SYM cord-279343-ybncwweg 109 16 R r NN cord-279343-ybncwweg 109 17 CRD crd NN cord-279343-ybncwweg 109 18 simultaneously simultaneously RB cord-279343-ybncwweg 109 19 would would MD cord-279343-ybncwweg 109 20 be be VB cord-279343-ybncwweg 109 21 preferred prefer VBN cord-279343-ybncwweg 109 22 by by IN cord-279343-ybncwweg 109 23 the the DT cord-279343-ybncwweg 109 24 receptor receptor NN cord-279343-ybncwweg 109 25 . . . cord-279343-ybncwweg 110 1 The the DT cord-279343-ybncwweg 110 2 surface surface NN cord-279343-ybncwweg 110 3 area area NN cord-279343-ybncwweg 110 4 encompassed encompass VBN cord-279343-ybncwweg 110 5 by by IN cord-279343-ybncwweg 110 6 the the DT cord-279343-ybncwweg 110 7 tetrameric tetrameric JJ cord-279343-ybncwweg 110 8 CRD crd NN cord-279343-ybncwweg 110 9 in in IN cord-279343-ybncwweg 110 10 our -PRON- PRP$ cord-279343-ybncwweg 110 11 current current JJ cord-279343-ybncwweg 110 12 DC DC NNP cord-279343-ybncwweg 110 13 - - HYPH cord-279343-ybncwweg 110 14 SIGN sign NN cord-279343-ybncwweg 110 15 / / SYM cord-279343-ybncwweg 110 16 R r NN cord-279343-ybncwweg 110 17 model model NN cord-279343-ybncwweg 110 18 is be VBZ cord-279343-ybncwweg 110 19 approximately approximately RB cord-279343-ybncwweg 110 20 6400 6400 CD cord-279343-ybncwweg 110 21 Å å NN cord-279343-ybncwweg 110 22 2 2 CD cord-279343-ybncwweg 110 23 , , , cord-279343-ybncwweg 110 24 or or CC cord-279343-ybncwweg 110 25 1600 1600 CD cord-279343-ybncwweg 110 26 Å å NN cord-279343-ybncwweg 110 27 2 2 CD cord-279343-ybncwweg 110 28 per per IN cord-279343-ybncwweg 110 29 CRD crd NN cord-279343-ybncwweg 110 30 molecule molecule NN cord-279343-ybncwweg 110 31 . . . cord-279343-ybncwweg 111 1 This this DT cord-279343-ybncwweg 111 2 requires require VBZ cord-279343-ybncwweg 111 3 the the DT cord-279343-ybncwweg 111 4 potential potential JJ cord-279343-ybncwweg 111 5 ligands ligand NNS cord-279343-ybncwweg 111 6 of of IN cord-279343-ybncwweg 111 7 DC DC NNP cord-279343-ybncwweg 111 8 - - HYPH cord-279343-ybncwweg 111 9 SIGN SIGN NNP cord-279343-ybncwweg 111 10 / / SYM cord-279343-ybncwweg 111 11 R r NN cord-279343-ybncwweg 111 12 to to TO cord-279343-ybncwweg 111 13 possess possess VB cord-279343-ybncwweg 111 14 a a DT cord-279343-ybncwweg 111 15 surface surface NN cord-279343-ybncwweg 111 16 glycosylation glycosylation NN cord-279343-ybncwweg 111 17 level level NN cord-279343-ybncwweg 111 18 exceeding exceed VBG cord-279343-ybncwweg 111 19 one one CD cord-279343-ybncwweg 111 20 glycan glycan NN cord-279343-ybncwweg 111 21 molecule molecule NN cord-279343-ybncwweg 111 22 per per IN cord-279343-ybncwweg 111 23 1600 1600 CD cord-279343-ybncwweg 111 24 Å å NN cord-279343-ybncwweg 111 25 2 2 CD cord-279343-ybncwweg 111 26 of of IN cord-279343-ybncwweg 111 27 its -PRON- PRP$ cord-279343-ybncwweg 111 28 surface surface NN cord-279343-ybncwweg 111 29 area area NN cord-279343-ybncwweg 111 30 . . . cord-279343-ybncwweg 112 1 This this DT cord-279343-ybncwweg 112 2 enables enable VBZ cord-279343-ybncwweg 112 3 us -PRON- PRP cord-279343-ybncwweg 112 4 to to TO cord-279343-ybncwweg 112 5 formulate formulate VB cord-279343-ybncwweg 112 6 a a DT cord-279343-ybncwweg 112 7 potential potential JJ cord-279343-ybncwweg 112 8 ligand ligand NN cord-279343-ybncwweg 112 9 index index NN cord-279343-ybncwweg 112 10 i i PRP cord-279343-ybncwweg 112 11 to to TO cord-279343-ybncwweg 112 12 evaluate evaluate VB cord-279343-ybncwweg 112 13 potential potential JJ cord-279343-ybncwweg 112 14 ligands ligand NNS cord-279343-ybncwweg 112 15 of of IN cord-279343-ybncwweg 112 16 DC DC NNP cord-279343-ybncwweg 112 17 - - HYPH cord-279343-ybncwweg 112 18 SIGN SIGN NNP cord-279343-ybncwweg 112 19 / / SYM cord-279343-ybncwweg 112 20 R r NN cord-279343-ybncwweg 112 21 on on IN cord-279343-ybncwweg 112 22 the the DT cord-279343-ybncwweg 112 23 basis basis NN cord-279343-ybncwweg 112 24 of of IN cord-279343-ybncwweg 112 25 their -PRON- PRP$ cord-279343-ybncwweg 112 26 surface surface NN cord-279343-ybncwweg 112 27 glycosylation glycosylation NN cord-279343-ybncwweg 112 28 density density NN cord-279343-ybncwweg 112 29 : : : cord-279343-ybncwweg 112 30 ( ( -LRB- cord-279343-ybncwweg 112 31 1 1 LS cord-279343-ybncwweg 112 32 ) ) -RRB- cord-279343-ybncwweg 112 33 where where WRB cord-279343-ybncwweg 112 34 N N NNP cord-279343-ybncwweg 112 35 is be VBZ cord-279343-ybncwweg 112 36 the the DT cord-279343-ybncwweg 112 37 number number NN cord-279343-ybncwweg 112 38 of of IN cord-279343-ybncwweg 112 39 predicted predict VBN cord-279343-ybncwweg 112 40 potential potential JJ cord-279343-ybncwweg 112 41 glycosylation glycosylation NN cord-279343-ybncwweg 112 42 sites site NNS cord-279343-ybncwweg 112 43 and and CC cord-279343-ybncwweg 112 44 M M NNP cord-279343-ybncwweg 112 45 is be VBZ cord-279343-ybncwweg 112 46 the the DT cord-279343-ybncwweg 112 47 molecular molecular JJ cord-279343-ybncwweg 112 48 mass mass NN cord-279343-ybncwweg 112 49 of of IN cord-279343-ybncwweg 112 50 the the DT cord-279343-ybncwweg 112 51 candidate candidate NN cord-279343-ybncwweg 112 52 protein protein NN cord-279343-ybncwweg 112 53 . . . cord-279343-ybncwweg 113 1 A a DT cord-279343-ybncwweg 113 2 potential potential JJ cord-279343-ybncwweg 113 3 DC DC NNP cord-279343-ybncwweg 113 4 - - HYPH cord-279343-ybncwweg 113 5 SIGN sign NN cord-279343-ybncwweg 113 6 / / SYM cord-279343-ybncwweg 113 7 R r NN cord-279343-ybncwweg 113 8 ligand ligand NN cord-279343-ybncwweg 113 9 would would MD cord-279343-ybncwweg 113 10 possess possess VB cord-279343-ybncwweg 113 11 an an DT cord-279343-ybncwweg 113 12 index index NN cord-279343-ybncwweg 113 13 greater great JJR cord-279343-ybncwweg 113 14 than than IN cord-279343-ybncwweg 113 15 1.0 1.0 CD cord-279343-ybncwweg 113 16 and and CC cord-279343-ybncwweg 113 17 proteins protein NNS cord-279343-ybncwweg 113 18 with with IN cord-279343-ybncwweg 113 19 the the DT cord-279343-ybncwweg 113 20 indices index NNS cord-279343-ybncwweg 114 1 less less JJR cord-279343-ybncwweg 114 2 than than IN cord-279343-ybncwweg 114 3 1.0 1.0 CD cord-279343-ybncwweg 114 4 are be VBP cord-279343-ybncwweg 114 5 less less RBR cord-279343-ybncwweg 114 6 likely likely JJ cord-279343-ybncwweg 114 7 to to TO cord-279343-ybncwweg 114 8 be be VB cord-279343-ybncwweg 114 9 ligands ligand NNS cord-279343-ybncwweg 114 10 of of IN cord-279343-ybncwweg 114 11 the the DT cord-279343-ybncwweg 114 12 receptor receptor NN cord-279343-ybncwweg 114 13 . . . cord-279343-ybncwweg 115 1 The the DT cord-279343-ybncwweg 115 2 calculation calculation NN cord-279343-ybncwweg 115 3 of of IN cord-279343-ybncwweg 115 4 this this DT cord-279343-ybncwweg 115 5 potential potential JJ cord-279343-ybncwweg 115 6 ligand ligand NN cord-279343-ybncwweg 115 7 index index NN cord-279343-ybncwweg 115 8 for for IN cord-279343-ybncwweg 115 9 a a DT cord-279343-ybncwweg 115 10 number number NN cord-279343-ybncwweg 115 11 of of IN cord-279343-ybncwweg 115 12 viral viral JJ cord-279343-ybncwweg 115 13 envelope envelope NN cord-279343-ybncwweg 115 14 glycoproteins glycoprotein NNS cord-279343-ybncwweg 115 15 as as RB cord-279343-ybncwweg 115 16 well well RB cord-279343-ybncwweg 115 17 as as IN cord-279343-ybncwweg 115 18 for for IN cord-279343-ybncwweg 115 19 some some DT cord-279343-ybncwweg 115 20 cell cell NN cord-279343-ybncwweg 115 21 - - HYPH cord-279343-ybncwweg 115 22 surface surface NN cord-279343-ybncwweg 115 23 glycoproteins glycoprotein NNS cord-279343-ybncwweg 115 24 is be VBZ cord-279343-ybncwweg 115 25 summarized summarize VBN cord-279343-ybncwweg 115 26 in in IN cord-279343-ybncwweg 115 27 Table Table NNP cord-279343-ybncwweg 115 28 3 3 CD cord-279343-ybncwweg 115 29 . . . cord-279343-ybncwweg 116 1 Of of IN cord-279343-ybncwweg 116 2 the the DT cord-279343-ybncwweg 116 3 potential potential JJ cord-279343-ybncwweg 116 4 viral viral JJ cord-279343-ybncwweg 116 5 targets target NNS cord-279343-ybncwweg 116 6 of of IN cord-279343-ybncwweg 116 7 DC DC NNP cord-279343-ybncwweg 116 8 - - HYPH cord-279343-ybncwweg 116 9 SIGN SIGN NNP cord-279343-ybncwweg 116 10 / / SYM cord-279343-ybncwweg 116 11 R R NNP cord-279343-ybncwweg 116 12 , , , cord-279343-ybncwweg 116 13 HIV-1 HIV-1 NNP cord-279343-ybncwweg 116 14 , , , cord-279343-ybncwweg 116 15 coronavirus coronavirus NN cord-279343-ybncwweg 116 16 and and CC cord-279343-ybncwweg 116 17 Marburg Marburg NNP cord-279343-ybncwweg 116 18 virus virus NN cord-279343-ybncwweg 116 19 are be VBP cord-279343-ybncwweg 116 20 known know VBN cord-279343-ybncwweg 116 21 to to TO cord-279343-ybncwweg 116 22 bind bind VB cord-279343-ybncwweg 116 23 DC DC NNP cord-279343-ybncwweg 116 24 - - HYPH cord-279343-ybncwweg 116 25 SIGN SIGN NNP cord-279343-ybncwweg 116 26 . . . cord-279343-ybncwweg 117 1 In in IN cord-279343-ybncwweg 117 2 addition addition NN cord-279343-ybncwweg 117 3 , , , cord-279343-ybncwweg 117 4 HRSV HRSV NNP cord-279343-ybncwweg 117 5 , , , cord-279343-ybncwweg 117 6 influenza influenza NN cord-279343-ybncwweg 117 7 and and CC cord-279343-ybncwweg 117 8 human human JJ cord-279343-ybncwweg 117 9 foamy foamy NN cord-279343-ybncwweg 117 10 viruses virus NNS cord-279343-ybncwweg 117 11 appear appear VBP cord-279343-ybncwweg 117 12 to to TO cord-279343-ybncwweg 117 13 be be VB cord-279343-ybncwweg 117 14 good good JJ cord-279343-ybncwweg 117 15 candidates candidate NNS cord-279343-ybncwweg 117 16 for for IN cord-279343-ybncwweg 117 17 DC DC NNP cord-279343-ybncwweg 117 18 - - HYPH cord-279343-ybncwweg 117 19 SIGN SIGN NNP cord-279343-ybncwweg 117 20 / / SYM cord-279343-ybncwweg 117 21 R. R. NNP cord-279343-ybncwweg 118 1 Among among IN cord-279343-ybncwweg 118 2 the the DT cord-279343-ybncwweg 118 3 cellular cellular JJ cord-279343-ybncwweg 118 4 targets target NNS cord-279343-ybncwweg 118 5 , , , cord-279343-ybncwweg 118 6 in in IN cord-279343-ybncwweg 118 7 addition addition NN cord-279343-ybncwweg 118 8 to to IN cord-279343-ybncwweg 118 9 the the DT cord-279343-ybncwweg 118 10 known know VBN cord-279343-ybncwweg 118 11 ICAM-3 icam-3 JJ cord-279343-ybncwweg 118 12 ligand ligand NN cord-279343-ybncwweg 118 13 , , , cord-279343-ybncwweg 118 14 several several JJ cord-279343-ybncwweg 118 15 surface surface NN cord-279343-ybncwweg 118 16 glycoproteins glycoprotein NNS cord-279343-ybncwweg 118 17 also also RB cord-279343-ybncwweg 118 18 score score VBP cord-279343-ybncwweg 118 19 favorably favorably RB cord-279343-ybncwweg 118 20 for for IN cord-279343-ybncwweg 118 21 DC DC NNP cord-279343-ybncwweg 118 22 - - HYPH cord-279343-ybncwweg 118 23 SIGN sign NN cord-279343-ybncwweg 118 24 binding binding NN cord-279343-ybncwweg 118 25 . . . cord-279343-ybncwweg 119 1 DC DC NNP cord-279343-ybncwweg 119 2 - - HYPH cord-279343-ybncwweg 119 3 SIGN SIGN NNP cord-279343-ybncwweg 119 4 and and CC cord-279343-ybncwweg 119 5 DC DC NNP cord-279343-ybncwweg 119 6 - - HYPH cord-279343-ybncwweg 119 7 SIGNR SIGNR NNP cord-279343-ybncwweg 119 8 are be VBP cord-279343-ybncwweg 119 9 part part NN cord-279343-ybncwweg 119 10 of of IN cord-279343-ybncwweg 119 11 an an DT cord-279343-ybncwweg 119 12 antigencapturing antigencapture VBG cord-279343-ybncwweg 119 13 network network NN cord-279343-ybncwweg 119 14 of of IN cord-279343-ybncwweg 119 15 receptors receptor NNS cord-279343-ybncwweg 119 16 expressed express VBN cord-279343-ybncwweg 119 17 on on IN cord-279343-ybncwweg 119 18 dendritic dendritic JJ cord-279343-ybncwweg 119 19 cells cell NNS cord-279343-ybncwweg 119 20 . . . cord-279343-ybncwweg 120 1 Previously previously RB cord-279343-ybncwweg 120 2 , , , cord-279343-ybncwweg 120 3 the the DT cord-279343-ybncwweg 120 4 structures structure NNS cord-279343-ybncwweg 120 5 of of IN cord-279343-ybncwweg 120 6 a a DT cord-279343-ybncwweg 120 7 mannose mannose NN cord-279343-ybncwweg 120 8 - - HYPH cord-279343-ybncwweg 120 9 bound bind VBN cord-279343-ybncwweg 120 10 and and CC cord-279343-ybncwweg 120 11 a a DT cord-279343-ybncwweg 120 12 Lewis Lewis NNP cord-279343-ybncwweg 120 13 x x : cord-279343-ybncwweg 120 14 -bound -bound VBN cord-279343-ybncwweg 120 15 form form NN cord-279343-ybncwweg 120 16 of of IN cord-279343-ybncwweg 120 17 the the DT cord-279343-ybncwweg 120 18 receptor receptor NN cord-279343-ybncwweg 120 19 showed show VBD cord-279343-ybncwweg 120 20 critical critical JJ cord-279343-ybncwweg 120 21 residues residue NNS cord-279343-ybncwweg 120 22 involved involve VBN cord-279343-ybncwweg 120 23 in in IN cord-279343-ybncwweg 120 24 both both DT cord-279343-ybncwweg 120 25 calcium calcium NN cord-279343-ybncwweg 120 26 and and CC cord-279343-ybncwweg 120 27 carbohydrate carbohydrate NN cord-279343-ybncwweg 120 28 interactions interaction NNS cord-279343-ybncwweg 120 29 . . . cord-279343-ybncwweg 121 1 18 18 CD cord-279343-ybncwweg 121 2 , , , cord-279343-ybncwweg 121 3 19 19 CD cord-279343-ybncwweg 121 4 Our -PRON- PRP$ cord-279343-ybncwweg 121 5 current current JJ cord-279343-ybncwweg 121 6 structure structure NN cord-279343-ybncwweg 121 7 of of IN cord-279343-ybncwweg 121 8 DC DC NNP cord-279343-ybncwweg 121 9 - - HYPH cord-279343-ybncwweg 121 10 SIGNR SIGNR NNP cord-279343-ybncwweg 121 11 R8 R8 NNP cord-279343-ybncwweg 121 12 represents represent VBZ cord-279343-ybncwweg 121 13 an an DT cord-279343-ybncwweg 121 14 apo apo NNP cord-279343-ybncwweg 121 15 form form NN cord-279343-ybncwweg 121 16 of of IN cord-279343-ybncwweg 121 17 the the DT cord-279343-ybncwweg 121 18 receptor receptor NN cord-279343-ybncwweg 121 19 . . . cord-279343-ybncwweg 122 1 The the DT cord-279343-ybncwweg 122 2 structure structure NN cord-279343-ybncwweg 122 3 revealed reveal VBD cord-279343-ybncwweg 122 4 that that IN cord-279343-ybncwweg 122 5 much much JJ cord-279343-ybncwweg 122 6 of of IN cord-279343-ybncwweg 122 7 the the DT cord-279343-ybncwweg 122 8 CRD CRD NNP cord-279343-ybncwweg 122 9 adopts adopt VBZ cord-279343-ybncwweg 122 10 a a DT cord-279343-ybncwweg 122 11 conformation conformation NN cord-279343-ybncwweg 122 12 very very RB cord-279343-ybncwweg 122 13 similar similar JJ cord-279343-ybncwweg 122 14 to to IN cord-279343-ybncwweg 122 15 that that DT cord-279343-ybncwweg 122 16 observed observe VBN cord-279343-ybncwweg 122 17 in in IN cord-279343-ybncwweg 122 18 the the DT cord-279343-ybncwweg 122 19 carbohydrate carbohydrate NN cord-279343-ybncwweg 122 20 - - HYPH cord-279343-ybncwweg 122 21 bound bind VBN cord-279343-ybncwweg 122 22 receptor receptor NN cord-279343-ybncwweg 122 23 , , , cord-279343-ybncwweg 122 24 with with IN cord-279343-ybncwweg 122 25 the the DT cord-279343-ybncwweg 122 26 exception exception NN cord-279343-ybncwweg 122 27 of of IN cord-279343-ybncwweg 122 28 two two CD cord-279343-ybncwweg 122 29 loops loop NNS cord-279343-ybncwweg 122 30 that that WDT cord-279343-ybncwweg 122 31 are be VBP cord-279343-ybncwweg 122 32 involved involve VBN cord-279343-ybncwweg 122 33 in in IN cord-279343-ybncwweg 122 34 the the DT cord-279343-ybncwweg 122 35 coordination coordination NN cord-279343-ybncwweg 122 36 of of IN cord-279343-ybncwweg 122 37 carbohydrate carbohydrate NN cord-279343-ybncwweg 122 38 ( ( -LRB- cord-279343-ybncwweg 122 39 residues residue NNS cord-279343-ybncwweg 122 40 361 361 CD cord-279343-ybncwweg 122 41 - - SYM cord-279343-ybncwweg 122 42 366 366 CD cord-279343-ybncwweg 122 43 ) ) -RRB- cord-279343-ybncwweg 122 44 and and CC cord-279343-ybncwweg 122 45 auxiliary auxiliary JJ cord-279343-ybncwweg 122 46 calcium calcium NN cord-279343-ybncwweg 122 47 ions ion NNS cord-279343-ybncwweg 122 48 ( ( -LRB- cord-279343-ybncwweg 122 49 residue residue NNP cord-279343-ybncwweg 122 50 332 332 CD cord-279343-ybncwweg 122 51 - - SYM cord-279343-ybncwweg 122 52 339 339 CD cord-279343-ybncwweg 122 53 ) ) -RRB- cord-279343-ybncwweg 122 54 in in IN cord-279343-ybncwweg 122 55 the the DT cord-279343-ybncwweg 122 56 bound bind VBN cord-279343-ybncwweg 122 57 - - HYPH cord-279343-ybncwweg 122 58 form form NN cord-279343-ybncwweg 122 59 . . . cord-279343-ybncwweg 123 1 In in IN cord-279343-ybncwweg 123 2 the the DT cord-279343-ybncwweg 123 3 absence absence NN cord-279343-ybncwweg 123 4 of of IN cord-279343-ybncwweg 123 5 the the DT cord-279343-ybncwweg 123 6 bound bind VBN cord-279343-ybncwweg 123 7 carbohydrate carbohydrate NN cord-279343-ybncwweg 123 8 , , , cord-279343-ybncwweg 123 9 both both DT cord-279343-ybncwweg 123 10 loops loop NNS cord-279343-ybncwweg 123 11 adopt adopt VBP cord-279343-ybncwweg 123 12 open open JJ cord-279343-ybncwweg 123 13 conformations conformation NNS cord-279343-ybncwweg 123 14 that that WDT cord-279343-ybncwweg 123 15 are be VBP cord-279343-ybncwweg 123 16 likely likely RB cord-279343-ybncwweg 123 17 attributed attribute VBN cord-279343-ybncwweg 123 18 to to IN cord-279343-ybncwweg 123 19 the the DT cord-279343-ybncwweg 123 20 loss loss NN cord-279343-ybncwweg 123 21 of of IN cord-279343-ybncwweg 123 22 interactions interaction NNS cord-279343-ybncwweg 123 23 with with IN cord-279343-ybncwweg 123 24 the the DT cord-279343-ybncwweg 123 25 putative putative JJ cord-279343-ybncwweg 123 26 carbohydrate carbohydrate NN cord-279343-ybncwweg 123 27 and and CC cord-279343-ybncwweg 123 28 calcium calcium NN cord-279343-ybncwweg 123 29 . . . cord-279343-ybncwweg 124 1 The the DT cord-279343-ybncwweg 124 2 absence absence NN cord-279343-ybncwweg 124 3 of of IN cord-279343-ybncwweg 124 4 two two CD cord-279343-ybncwweg 124 5 bound bind VBN cord-279343-ybncwweg 124 6 auxiliary auxiliary JJ cord-279343-ybncwweg 124 7 calcium calcium NN cord-279343-ybncwweg 124 8 ions ion NNS cord-279343-ybncwweg 124 9 compared compare VBN cord-279343-ybncwweg 124 10 with with IN cord-279343-ybncwweg 124 11 the the DT cord-279343-ybncwweg 124 12 structure structure NN cord-279343-ybncwweg 124 13 of of IN cord-279343-ybncwweg 124 14 the the DT cord-279343-ybncwweg 124 15 carbohydrate carbohydrate NN cord-279343-ybncwweg 124 16 - - HYPH cord-279343-ybncwweg 124 17 bound bind VBN cord-279343-ybncwweg 124 18 receptor receptor NN cord-279343-ybncwweg 124 19 suggests suggest VBZ cord-279343-ybncwweg 124 20 that that IN cord-279343-ybncwweg 124 21 the the DT cord-279343-ybncwweg 124 22 auxiliary auxiliary JJ cord-279343-ybncwweg 124 23 calcium calcium NN cord-279343-ybncwweg 124 24 sites site NNS cord-279343-ybncwweg 124 25 are be VBP cord-279343-ybncwweg 124 26 of of IN cord-279343-ybncwweg 124 27 low low JJ cord-279343-ybncwweg 124 28 affinity affinity NN cord-279343-ybncwweg 124 29 compared compare VBN cord-279343-ybncwweg 124 30 to to IN cord-279343-ybncwweg 124 31 the the DT cord-279343-ybncwweg 124 32 primary primary JJ cord-279343-ybncwweg 124 33 calcium calcium NN cord-279343-ybncwweg 124 34 site site NN cord-279343-ybncwweg 124 35 , , , cord-279343-ybncwweg 124 36 and and CC cord-279343-ybncwweg 124 37 their -PRON- PRP$ cord-279343-ybncwweg 124 38 presence presence NN cord-279343-ybncwweg 124 39 appears appear VBZ cord-279343-ybncwweg 124 40 to to TO cord-279343-ybncwweg 124 41 be be VB cord-279343-ybncwweg 124 42 ligand ligand NN cord-279343-ybncwweg 124 43 - - HYPH cord-279343-ybncwweg 124 44 induced induce VBN cord-279343-ybncwweg 124 45 . . . cord-279343-ybncwweg 125 1 The the DT cord-279343-ybncwweg 125 2 multivalent multivalent JJ cord-279343-ybncwweg 125 3 nature nature NN cord-279343-ybncwweg 125 4 of of IN cord-279343-ybncwweg 125 5 DC DC NNP cord-279343-ybncwweg 125 6 - - HYPH cord-279343-ybncwweg 125 7 SIGN SIGN NNP cord-279343-ybncwweg 125 8 / / SYM cord-279343-ybncwweg 125 9 R r NN cord-279343-ybncwweg 125 10 indicates indicate VBZ cord-279343-ybncwweg 125 11 that that IN cord-279343-ybncwweg 125 12 recognition recognition NN cord-279343-ybncwweg 125 13 of of IN cord-279343-ybncwweg 125 14 small small JJ cord-279343-ybncwweg 125 15 carbohydrate carbohydrate NN cord-279343-ybncwweg 125 16 compounds compound NNS cord-279343-ybncwweg 125 17 by by IN cord-279343-ybncwweg 125 18 individual individual JJ cord-279343-ybncwweg 125 19 CRD crd NN cord-279343-ybncwweg 125 20 alone alone RB cord-279343-ybncwweg 125 21 is be VBZ cord-279343-ybncwweg 125 22 not not RB cord-279343-ybncwweg 125 23 sufficient sufficient JJ cord-279343-ybncwweg 125 24 to to TO cord-279343-ybncwweg 125 25 achieve achieve VB cord-279343-ybncwweg 125 26 the the DT cord-279343-ybncwweg 125 27 high high JJ cord-279343-ybncwweg 125 28 - - HYPH cord-279343-ybncwweg 125 29 affinity affinity NN cord-279343-ybncwweg 125 30 interactions interaction NNS cord-279343-ybncwweg 125 31 of of IN cord-279343-ybncwweg 125 32 DC DC NNP cord-279343-ybncwweg 125 33 - - HYPH cord-279343-ybncwweg 125 34 SIGN SIGN NNP cord-279343-ybncwweg 125 35 and and CC cord-279343-ybncwweg 125 36 DC DC NNP cord-279343-ybncwweg 125 37 - - HYPH cord-279343-ybncwweg 125 38 SIGNR SIGNR NNP cord-279343-ybncwweg 125 39 with with IN cord-279343-ybncwweg 125 40 pathogens pathogen NNS cord-279343-ybncwweg 125 41 like like IN cord-279343-ybncwweg 125 42 HIV-1 HIV-1 NNP cord-279343-ybncwweg 125 43 gp120 gp120 NNP cord-279343-ybncwweg 125 44 . . . cord-279343-ybncwweg 126 1 The the DT cord-279343-ybncwweg 126 2 functional functional JJ cord-279343-ybncwweg 126 3 receptors receptor NNS cord-279343-ybncwweg 126 4 have have VBP cord-279343-ybncwweg 126 5 been be VBN cord-279343-ybncwweg 126 6 shown show VBN cord-279343-ybncwweg 126 7 to to TO cord-279343-ybncwweg 126 8 be be VB cord-279343-ybncwweg 126 9 tetramers tetramer NNS cord-279343-ybncwweg 126 10 . . . cord-279343-ybncwweg 127 1 17 17 CD cord-279343-ybncwweg 127 2 , , , cord-279343-ybncwweg 127 3 21 21 CD cord-279343-ybncwweg 128 1 In in IN cord-279343-ybncwweg 128 2 addition addition NN cord-279343-ybncwweg 128 3 , , , cord-279343-ybncwweg 128 4 biochemical biochemical JJ cord-279343-ybncwweg 128 5 studies study NNS cord-279343-ybncwweg 128 6 with with IN cord-279343-ybncwweg 128 7 repeat repeat NN cord-279343-ybncwweg 128 8 domain domain NN cord-279343-ybncwweg 128 9 deletion deletion NN cord-279343-ybncwweg 128 10 mutants mutant NNS cord-279343-ybncwweg 128 11 have have VBP cord-279343-ybncwweg 128 12 shown show VBN cord-279343-ybncwweg 128 13 that that IN cord-279343-ybncwweg 128 14 a a DT cord-279343-ybncwweg 128 15 minimum minimum NN cord-279343-ybncwweg 128 16 of of IN cord-279343-ybncwweg 128 17 three three CD cord-279343-ybncwweg 128 18 repeats repeat NNS cord-279343-ybncwweg 128 19 are be VBP cord-279343-ybncwweg 128 20 necessary necessary JJ cord-279343-ybncwweg 128 21 to to TO cord-279343-ybncwweg 128 22 form form VB cord-279343-ybncwweg 128 23 tetramers tetramer NNS cord-279343-ybncwweg 128 24 , , , cord-279343-ybncwweg 128 25 with with IN cord-279343-ybncwweg 128 26 additional additional JJ cord-279343-ybncwweg 128 27 repeats repeat NNS cord-279343-ybncwweg 128 28 functioning function VBG cord-279343-ybncwweg 128 29 to to TO cord-279343-ybncwweg 128 30 stabilize stabilize VB cord-279343-ybncwweg 128 31 the the DT cord-279343-ybncwweg 128 32 tetramer tetramer NN cord-279343-ybncwweg 128 33 . . . cord-279343-ybncwweg 129 1 21 21 CD cord-279343-ybncwweg 130 1 On on IN cord-279343-ybncwweg 130 2 the the DT cord-279343-ybncwweg 130 3 basis basis NN cord-279343-ybncwweg 130 4 of of IN cord-279343-ybncwweg 130 5 the the DT cord-279343-ybncwweg 130 6 current current JJ cord-279343-ybncwweg 130 7 crystal crystal NN cord-279343-ybncwweg 130 8 structures structure NNS cord-279343-ybncwweg 130 9 and and CC cord-279343-ybncwweg 130 10 available available JJ cord-279343-ybncwweg 130 11 biophysical biophysical JJ cord-279343-ybncwweg 130 12 data datum NNS cord-279343-ybncwweg 130 13 , , , cord-279343-ybncwweg 130 14 a a DT cord-279343-ybncwweg 130 15 tetramer tetramer NN cord-279343-ybncwweg 130 16 for for IN cord-279343-ybncwweg 130 17 the the DT cord-279343-ybncwweg 130 18 entire entire JJ cord-279343-ybncwweg 130 19 extracellular extracellular JJ cord-279343-ybncwweg 130 20 DC DC NNP cord-279343-ybncwweg 130 21 - - HYPH cord-279343-ybncwweg 130 22 SIGNR SIGNR NNP cord-279343-ybncwweg 130 23 receptor receptor NN cord-279343-ybncwweg 130 24 was be VBD cord-279343-ybncwweg 130 25 constructed construct VBN cord-279343-ybncwweg 130 26 by by IN cord-279343-ybncwweg 130 27 homology homology NN cord-279343-ybncwweg 130 28 modeling model VBG cord-279343-ybncwweg 130 29 in in IN cord-279343-ybncwweg 130 30 which which WDT cord-279343-ybncwweg 130 31 the the DT cord-279343-ybncwweg 130 32 repeat repeat NN cord-279343-ybncwweg 130 33 regions region NNS cord-279343-ybncwweg 130 34 form form VBP cord-279343-ybncwweg 130 35 helical helical JJ cord-279343-ybncwweg 130 36 bundles bundle NNS cord-279343-ybncwweg 130 37 to to TO cord-279343-ybncwweg 130 38 bring bring VB cord-279343-ybncwweg 130 39 together together RB cord-279343-ybncwweg 130 40 their -PRON- PRP$ cord-279343-ybncwweg 130 41 CRDs crd NNS cord-279343-ybncwweg 130 42 in in IN cord-279343-ybncwweg 130 43 a a DT cord-279343-ybncwweg 130 44 4-fold 4-fold RB cord-279343-ybncwweg 130 45 related related JJ cord-279343-ybncwweg 130 46 symmetry symmetry NN cord-279343-ybncwweg 130 47 . . . cord-279343-ybncwweg 131 1 This this DT cord-279343-ybncwweg 131 2 helical helical JJ cord-279343-ybncwweg 131 3 bundle bundle NN cord-279343-ybncwweg 131 4 - - HYPH cord-279343-ybncwweg 131 5 mediated mediate VBN cord-279343-ybncwweg 131 6 oligomerization oligomerization NN cord-279343-ybncwweg 131 7 resembles resemble VBZ cord-279343-ybncwweg 131 8 superficially superficially RB cord-279343-ybncwweg 131 9 the the DT cord-279343-ybncwweg 131 10 trimer trimer NN cord-279343-ybncwweg 131 11 of of IN cord-279343-ybncwweg 131 12 rat rat NN cord-279343-ybncwweg 131 13 mannose mannose NN cord-279343-ybncwweg 131 14 - - HYPH cord-279343-ybncwweg 131 15 binding bind VBG cord-279343-ybncwweg 131 16 protein protein NN cord-279343-ybncwweg 131 17 . . . cord-279343-ybncwweg 132 1 20 20 CD cord-279343-ybncwweg 133 1 While while IN cord-279343-ybncwweg 133 2 the the DT cord-279343-ybncwweg 133 3 receptor receptor NN cord-279343-ybncwweg 133 4 repeat repeat NN cord-279343-ybncwweg 133 5 domain domain NN cord-279343-ybncwweg 133 6 is be VBZ cord-279343-ybncwweg 133 7 conserved conserve VBN cord-279343-ybncwweg 133 8 in in IN cord-279343-ybncwweg 133 9 most most JJS cord-279343-ybncwweg 133 10 species specie NNS cord-279343-ybncwweg 133 11 , , , cord-279343-ybncwweg 133 12 a a DT cord-279343-ybncwweg 133 13 notable notable JJ cord-279343-ybncwweg 133 14 exception exception NN cord-279343-ybncwweg 133 15 is be VBZ cord-279343-ybncwweg 133 16 that that DT cord-279343-ybncwweg 133 17 of of IN cord-279343-ybncwweg 133 18 Old Old NNP cord-279343-ybncwweg 133 19 World World NNP cord-279343-ybncwweg 133 20 Rhesus Rhesus NNP cord-279343-ybncwweg 133 21 monkey monkey NN cord-279343-ybncwweg 133 22 , , , cord-279343-ybncwweg 133 23 whose whose WP$ cord-279343-ybncwweg 133 24 DC DC NNP cord-279343-ybncwweg 133 25 - - HYPH cord-279343-ybncwweg 133 26 SIGNR SIGNR NNP cord-279343-ybncwweg 133 27 gene gene NN cord-279343-ybncwweg 133 28 ( ( -LRB- cord-279343-ybncwweg 133 29 CD209L2 CD209L2 NNP cord-279343-ybncwweg 133 30 ) ) -RRB- cord-279343-ybncwweg 133 31 is be VBZ cord-279343-ybncwweg 133 32 missing miss VBG cord-279343-ybncwweg 133 33 all all PDT cord-279343-ybncwweg 133 34 the the DT cord-279343-ybncwweg 133 35 repeats repeat NNS cord-279343-ybncwweg 133 36 and and CC cord-279343-ybncwweg 133 37 DC DC NNP cord-279343-ybncwweg 133 38 - - HYPH cord-279343-ybncwweg 133 39 SIGN sign NN cord-279343-ybncwweg 133 40 gene gene NN cord-279343-ybncwweg 133 41 is be VBZ cord-279343-ybncwweg 133 42 missing miss VBG cord-279343-ybncwweg 133 43 the the DT cord-279343-ybncwweg 133 44 fourth fourth JJ cord-279343-ybncwweg 133 45 repeat repeat NN cord-279343-ybncwweg 133 46 . . . cord-279343-ybncwweg 134 1 27 27 CD cord-279343-ybncwweg 134 2 CD209L2 CD209L2 NNP cord-279343-ybncwweg 134 3 is be VBZ cord-279343-ybncwweg 134 4 predicted predict VBN cord-279343-ybncwweg 134 5 to to TO cord-279343-ybncwweg 134 6 be be VB cord-279343-ybncwweg 134 7 a a DT cord-279343-ybncwweg 134 8 monomer monomer NN cord-279343-ybncwweg 134 9 and and CC cord-279343-ybncwweg 134 10 has have VBZ cord-279343-ybncwweg 134 11 been be VBN cord-279343-ybncwweg 134 12 shown show VBN cord-279343-ybncwweg 134 13 to to TO cord-279343-ybncwweg 134 14 be be VB cord-279343-ybncwweg 134 15 less less RBR cord-279343-ybncwweg 134 16 efficient efficient JJ cord-279343-ybncwweg 134 17 in in IN cord-279343-ybncwweg 134 18 binding bind VBG cord-279343-ybncwweg 134 19 to to IN cord-279343-ybncwweg 134 20 both both CC cord-279343-ybncwweg 134 21 ICAM-3 ICAM-3 NNP cord-279343-ybncwweg 134 22 and and CC cord-279343-ybncwweg 134 23 HIV HIV NNP cord-279343-ybncwweg 134 24 gp120 gp120 NNP cord-279343-ybncwweg 134 25 . . . cord-279343-ybncwweg 135 1 The the DT cord-279343-ybncwweg 135 2 fourth fourth JJ cord-279343-ybncwweg 135 3 repeat repeat NN cord-279343-ybncwweg 135 4 in in IN cord-279343-ybncwweg 135 5 our -PRON- PRP$ cord-279343-ybncwweg 135 6 model model NN cord-279343-ybncwweg 135 7 serves serve VBZ cord-279343-ybncwweg 135 8 as as IN cord-279343-ybncwweg 135 9 a a DT cord-279343-ybncwweg 135 10 connecting connect VBG cord-279343-ybncwweg 135 11 helix helix NN cord-279343-ybncwweg 135 12 between between IN cord-279343-ybncwweg 135 13 the the DT cord-279343-ybncwweg 135 14 two two CD cord-279343-ybncwweg 135 15 helical helical JJ cord-279343-ybncwweg 135 16 bundles bundle NNS cord-279343-ybncwweg 135 17 . . . cord-279343-ybncwweg 136 1 Deletion deletion NN cord-279343-ybncwweg 136 2 of of IN cord-279343-ybncwweg 136 3 this this DT cord-279343-ybncwweg 136 4 repeat repeat NN cord-279343-ybncwweg 136 5 would would MD cord-279343-ybncwweg 136 6 most most RBS cord-279343-ybncwweg 136 7 likely likely RB cord-279343-ybncwweg 136 8 shorten shorten VB cord-279343-ybncwweg 136 9 this this DT cord-279343-ybncwweg 136 10 connecting connect VBG cord-279343-ybncwweg 136 11 helix helix NN cord-279343-ybncwweg 136 12 but but CC cord-279343-ybncwweg 136 13 may may MD cord-279343-ybncwweg 136 14 not not RB cord-279343-ybncwweg 136 15 affect affect VB cord-279343-ybncwweg 136 16 the the DT cord-279343-ybncwweg 136 17 formation formation NN cord-279343-ybncwweg 136 18 of of IN cord-279343-ybncwweg 136 19 the the DT cord-279343-ybncwweg 136 20 helical helical JJ cord-279343-ybncwweg 136 21 bundles bundle NNS cord-279343-ybncwweg 136 22 ( ( -LRB- cord-279343-ybncwweg 136 23 R6-R8 R6-R8 NNP cord-279343-ybncwweg 136 24 and and CC cord-279343-ybncwweg 136 25 R1-R3 R1-R3 NNP cord-279343-ybncwweg 136 26 ) ) -RRB- cord-279343-ybncwweg 136 27 . . . cord-279343-ybncwweg 137 1 The the DT cord-279343-ybncwweg 137 2 results result NNS cord-279343-ybncwweg 137 3 of of IN cord-279343-ybncwweg 137 4 trypsin trypsin JJ cord-279343-ybncwweg 137 5 digestion digestion NN cord-279343-ybncwweg 137 6 studies study NNS cord-279343-ybncwweg 137 7 appear appear VBP cord-279343-ybncwweg 137 8 to to TO cord-279343-ybncwweg 137 9 support support VB cord-279343-ybncwweg 137 10 a a DT cord-279343-ybncwweg 137 11 model model NN cord-279343-ybncwweg 137 12 in in IN cord-279343-ybncwweg 137 13 which which WDT cord-279343-ybncwweg 137 14 the the DT cord-279343-ybncwweg 137 15 helical helical JJ cord-279343-ybncwweg 137 16 repeats repeat NNS cord-279343-ybncwweg 137 17 are be VBP cord-279343-ybncwweg 137 18 protected protect VBN cord-279343-ybncwweg 137 19 from from IN cord-279343-ybncwweg 137 20 protease protease NN cord-279343-ybncwweg 137 21 by by IN cord-279343-ybncwweg 137 22 forming form VBG cord-279343-ybncwweg 137 23 tightly tightly RB cord-279343-ybncwweg 137 24 packed pack VBN cord-279343-ybncwweg 137 25 helical helical JJ cord-279343-ybncwweg 137 26 bundles bundle NNS cord-279343-ybncwweg 137 27 rather rather RB cord-279343-ybncwweg 137 28 than than IN cord-279343-ybncwweg 137 29 by by IN cord-279343-ybncwweg 137 30 forming form VBG cord-279343-ybncwweg 137 31 a a DT cord-279343-ybncwweg 137 32 single single JJ cord-279343-ybncwweg 137 33 elongated elongated JJ cord-279343-ybncwweg 137 34 helical helical JJ cord-279343-ybncwweg 137 35 domain domain NN cord-279343-ybncwweg 137 36 ( ( -LRB- cord-279343-ybncwweg 137 37 Figure figure NN cord-279343-ybncwweg 137 38 4 4 CD cord-279343-ybncwweg 137 39 ) ) -RRB- cord-279343-ybncwweg 137 40 . . . cord-279343-ybncwweg 138 1 Using use VBG cord-279343-ybncwweg 138 2 this this DT cord-279343-ybncwweg 138 3 DC DC NNP cord-279343-ybncwweg 138 4 - - HYPH cord-279343-ybncwweg 138 5 SIGNR SIGNR NNP cord-279343-ybncwweg 138 6 tetramer tetramer NN cord-279343-ybncwweg 138 7 model model NN cord-279343-ybncwweg 138 8 and and CC cord-279343-ybncwweg 138 9 the the DT cord-279343-ybncwweg 138 10 assumption assumption NN cord-279343-ybncwweg 138 11 that that IN cord-279343-ybncwweg 138 12 high high JJ cord-279343-ybncwweg 138 13 - - HYPH cord-279343-ybncwweg 138 14 affinity affinity NN cord-279343-ybncwweg 138 15 ligand ligand NN cord-279343-ybncwweg 138 16 binding binding NN cord-279343-ybncwweg 138 17 requires require VBZ cord-279343-ybncwweg 138 18 simultaneous simultaneous JJ cord-279343-ybncwweg 138 19 engagement engagement NN cord-279343-ybncwweg 138 20 of of IN cord-279343-ybncwweg 138 21 multiple multiple JJ cord-279343-ybncwweg 138 22 CRD crd NN cord-279343-ybncwweg 138 23 of of IN cord-279343-ybncwweg 138 24 the the DT cord-279343-ybncwweg 138 25 tetrameric tetrameric JJ cord-279343-ybncwweg 138 26 receptor receptor NN cord-279343-ybncwweg 138 27 , , , cord-279343-ybncwweg 138 28 we -PRON- PRP cord-279343-ybncwweg 138 29 formulated formulate VBD cord-279343-ybncwweg 138 30 a a DT cord-279343-ybncwweg 138 31 prediction prediction NN cord-279343-ybncwweg 138 32 scheme scheme NN cord-279343-ybncwweg 138 33 for for IN cord-279343-ybncwweg 138 34 potential potential JJ cord-279343-ybncwweg 138 35 ligands ligand NNS cord-279343-ybncwweg 138 36 of of IN cord-279343-ybncwweg 138 37 DC DC NNP cord-279343-ybncwweg 138 38 - - HYPH cord-279343-ybncwweg 138 39 SIGN SIGN NNP cord-279343-ybncwweg 138 40 / / SYM cord-279343-ybncwweg 138 41 R r NN cord-279343-ybncwweg 138 42 based base VBN cord-279343-ybncwweg 138 43 on on IN cord-279343-ybncwweg 138 44 their -PRON- PRP$ cord-279343-ybncwweg 138 45 predicted predict VBN cord-279343-ybncwweg 138 46 gross gross JJ cord-279343-ybncwweg 138 47 glycosylation glycosylation NN cord-279343-ybncwweg 138 48 density density NN cord-279343-ybncwweg 138 49 . . . cord-279343-ybncwweg 139 1 The the DT cord-279343-ybncwweg 139 2 results result NNS cord-279343-ybncwweg 139 3 show show VBP cord-279343-ybncwweg 139 4 that that IN cord-279343-ybncwweg 139 5 several several JJ cord-279343-ybncwweg 139 6 viral viral JJ cord-279343-ybncwweg 139 7 envelope envelope NN cord-279343-ybncwweg 139 8 glycoproteins glycoprotein NNS cord-279343-ybncwweg 139 9 , , , cord-279343-ybncwweg 139 10 including include VBG cord-279343-ybncwweg 139 11 HIV-1 HIV-1 NNP cord-279343-ybncwweg 139 12 gp120 gp120 NNP cord-279343-ybncwweg 139 13 , , , cord-279343-ybncwweg 139 14 Marburg Marburg NNP cord-279343-ybncwweg 139 15 virus virus NN cord-279343-ybncwweg 139 16 GP gp NN cord-279343-ybncwweg 139 17 , , , cord-279343-ybncwweg 139 18 coronavirus coronavirus NN cord-279343-ybncwweg 139 19 spike spike NN cord-279343-ybncwweg 139 20 protein protein NN cord-279343-ybncwweg 139 21 , , , cord-279343-ybncwweg 139 22 and and CC cord-279343-ybncwweg 139 23 HRSV HRSV NNP cord-279343-ybncwweg 139 24 glycoprotein glycoprotein NN cord-279343-ybncwweg 139 25 G g NN cord-279343-ybncwweg 139 26 , , , cord-279343-ybncwweg 139 27 possess possess VBP cord-279343-ybncwweg 139 28 high high JJ cord-279343-ybncwweg 139 29 ligand ligand NN cord-279343-ybncwweg 139 30 indices index NNS cord-279343-ybncwweg 139 31 . . . cord-279343-ybncwweg 140 1 Among among IN cord-279343-ybncwweg 140 2 them -PRON- PRP cord-279343-ybncwweg 140 3 , , , cord-279343-ybncwweg 140 4 gp120 gp120 CD cord-279343-ybncwweg 140 5 of of IN cord-279343-ybncwweg 140 6 HIV HIV NNP cord-279343-ybncwweg 140 7 , , , cord-279343-ybncwweg 140 8 GP GP NNP cord-279343-ybncwweg 140 9 of of IN cord-279343-ybncwweg 140 10 Ebola Ebola NNP cord-279343-ybncwweg 140 11 , , , cord-279343-ybncwweg 140 12 and and CC cord-279343-ybncwweg 140 13 the the DT cord-279343-ybncwweg 140 14 spike spike NN cord-279343-ybncwweg 140 15 protein protein NN cord-279343-ybncwweg 140 16 of of IN cord-279343-ybncwweg 140 17 coronavirus coronavirus NN cord-279343-ybncwweg 140 18 are be VBP cord-279343-ybncwweg 140 19 known know VBN cord-279343-ybncwweg 140 20 ligands ligand NNS cord-279343-ybncwweg 140 21 of of IN cord-279343-ybncwweg 140 22 DC DC NNP cord-279343-ybncwweg 140 23 - - HYPH cord-279343-ybncwweg 140 24 SIGN SIGN NNP cord-279343-ybncwweg 140 25 . . . cord-279343-ybncwweg 141 1 Of of IN cord-279343-ybncwweg 141 2 the the DT cord-279343-ybncwweg 141 3 potential potential JJ cord-279343-ybncwweg 141 4 cellular cellular JJ cord-279343-ybncwweg 141 5 targets target NNS cord-279343-ybncwweg 141 6 , , , cord-279343-ybncwweg 141 7 in in IN cord-279343-ybncwweg 141 8 addition addition NN cord-279343-ybncwweg 141 9 to to IN cord-279343-ybncwweg 141 10 the the DT cord-279343-ybncwweg 141 11 known know VBN cord-279343-ybncwweg 141 12 ICAM-3 icam-3 JJ cord-279343-ybncwweg 141 13 ligand ligand NN cord-279343-ybncwweg 141 14 , , , cord-279343-ybncwweg 141 15 mucins mucin NNS cord-279343-ybncwweg 141 16 are be VBP cord-279343-ybncwweg 141 17 notably notably RB cord-279343-ybncwweg 141 18 ranked rank VBN cord-279343-ybncwweg 141 19 high high RB cord-279343-ybncwweg 141 20 in in IN cord-279343-ybncwweg 141 21 our -PRON- PRP$ cord-279343-ybncwweg 141 22 scoring scoring NN cord-279343-ybncwweg 141 23 scheme scheme NN cord-279343-ybncwweg 141 24 . . . cord-279343-ybncwweg 142 1 The the DT cord-279343-ybncwweg 142 2 low low RB cord-279343-ybncwweg 142 3 - - HYPH cord-279343-ybncwweg 142 4 scoring score VBG cord-279343-ybncwweg 142 5 molecules molecule NNS cord-279343-ybncwweg 142 6 , , , cord-279343-ybncwweg 142 7 such such JJ cord-279343-ybncwweg 142 8 as as IN cord-279343-ybncwweg 142 9 IgG igg NN cord-279343-ybncwweg 142 10 , , , cord-279343-ybncwweg 142 11 KIR2DL2 KIR2DL2 NNP cord-279343-ybncwweg 142 12 and and CC cord-279343-ybncwweg 142 13 HLA HLA NNP cord-279343-ybncwweg 142 14 - - HYPH cord-279343-ybncwweg 142 15 CW3 CW3 NNP cord-279343-ybncwweg 142 16 did do VBD cord-279343-ybncwweg 142 17 not not RB cord-279343-ybncwweg 142 18 exhibit exhibit VB cord-279343-ybncwweg 142 19 binding bind VBG cord-279343-ybncwweg 142 20 to to IN cord-279343-ybncwweg 142 21 DC DC NNP cord-279343-ybncwweg 142 22 - - HYPH cord-279343-ybncwweg 142 23 SIGN sign NN cord-279343-ybncwweg 142 24 / / SYM cord-279343-ybncwweg 142 25 R r NN cord-279343-ybncwweg 142 26 ( ( -LRB- cord-279343-ybncwweg 142 27 data datum NNS cord-279343-ybncwweg 142 28 not not RB cord-279343-ybncwweg 142 29 shown show VBN cord-279343-ybncwweg 142 30 ) ) -RRB- cord-279343-ybncwweg 142 31 . . . cord-279343-ybncwweg 143 1 It -PRON- PRP cord-279343-ybncwweg 143 2 should should MD cord-279343-ybncwweg 143 3 be be VB cord-279343-ybncwweg 143 4 noted note VBN cord-279343-ybncwweg 143 5 that that IN cord-279343-ybncwweg 143 6 the the DT cord-279343-ybncwweg 143 7 receptor receptor NN cord-279343-ybncwweg 143 8 - - HYPH cord-279343-ybncwweg 143 9 ligand ligand NN cord-279343-ybncwweg 143 10 binding binding NN cord-279343-ybncwweg 143 11 will will MD cord-279343-ybncwweg 143 12 also also RB cord-279343-ybncwweg 143 13 depend depend VB cord-279343-ybncwweg 143 14 on on IN cord-279343-ybncwweg 143 15 the the DT cord-279343-ybncwweg 143 16 geometrical geometrical JJ cord-279343-ybncwweg 143 17 constraint constraint NN cord-279343-ybncwweg 143 18 , , , cord-279343-ybncwweg 143 19 including include VBG cord-279343-ybncwweg 143 20 the the DT cord-279343-ybncwweg 143 21 distance distance NN cord-279343-ybncwweg 143 22 between between IN cord-279343-ybncwweg 143 23 and and CC cord-279343-ybncwweg 143 24 the the DT cord-279343-ybncwweg 143 25 orientation orientation NN cord-279343-ybncwweg 143 26 of of IN cord-279343-ybncwweg 143 27 the the DT cord-279343-ybncwweg 143 28 CRDs crd NNS cord-279343-ybncwweg 143 29 . . . cord-279343-ybncwweg 144 1 The the DT cord-279343-ybncwweg 144 2 distance distance NN cord-279343-ybncwweg 144 3 between between IN cord-279343-ybncwweg 144 4 glycans glycan NNS cord-279343-ybncwweg 144 5 , , , cord-279343-ybncwweg 144 6 in in IN cord-279343-ybncwweg 144 7 general general JJ cord-279343-ybncwweg 144 8 , , , cord-279343-ybncwweg 144 9 should should MD cord-279343-ybncwweg 144 10 correlate correlate VB cord-279343-ybncwweg 144 11 with with IN cord-279343-ybncwweg 144 12 their -PRON- PRP$ cord-279343-ybncwweg 144 13 surface surface NN cord-279343-ybncwweg 144 14 density density NN cord-279343-ybncwweg 144 15 . . . cord-279343-ybncwweg 145 1 Situations situation NNS cord-279343-ybncwweg 145 2 in in IN cord-279343-ybncwweg 145 3 which which WDT cord-279343-ybncwweg 145 4 local local JJ cord-279343-ybncwweg 145 5 spacing spacing NN cord-279343-ybncwweg 145 6 variation variation NN cord-279343-ybncwweg 145 7 resulting result VBG cord-279343-ybncwweg 145 8 in in IN cord-279343-ybncwweg 145 9 the the DT cord-279343-ybncwweg 145 10 distance distance NN cord-279343-ybncwweg 145 11 between between IN cord-279343-ybncwweg 145 12 glycans glycan NNS cord-279343-ybncwweg 145 13 either either CC cord-279343-ybncwweg 145 14 too too RB cord-279343-ybncwweg 145 15 close close JJ cord-279343-ybncwweg 145 16 or or CC cord-279343-ybncwweg 145 17 too too RB cord-279343-ybncwweg 145 18 far far RB cord-279343-ybncwweg 145 19 apart apart RB cord-279343-ybncwweg 145 20 to to TO cord-279343-ybncwweg 145 21 simultaneously simultaneously RB cord-279343-ybncwweg 145 22 engage engage VB cord-279343-ybncwweg 145 23 the the DT cord-279343-ybncwweg 145 24 multimeric multimeric JJ cord-279343-ybncwweg 145 25 CRD CRD NNP cord-279343-ybncwweg 145 26 would would MD cord-279343-ybncwweg 145 27 clearly clearly RB cord-279343-ybncwweg 145 28 affect affect VB cord-279343-ybncwweg 145 29 the the DT cord-279343-ybncwweg 145 30 recognition recognition NN cord-279343-ybncwweg 145 31 by by IN cord-279343-ybncwweg 145 32 the the DT cord-279343-ybncwweg 145 33 receptor receptor NN cord-279343-ybncwweg 145 34 . . . cord-279343-ybncwweg 146 1 Nevertheless nevertheless RB cord-279343-ybncwweg 146 2 , , , cord-279343-ybncwweg 146 3 the the DT cord-279343-ybncwweg 146 4 known know VBN cord-279343-ybncwweg 146 5 flexibility flexibility NN cord-279343-ybncwweg 146 6 of of IN cord-279343-ybncwweg 146 7 glycans glycan NNS cord-279343-ybncwweg 146 8 and and CC cord-279343-ybncwweg 146 9 the the DT cord-279343-ybncwweg 146 10 observed observed JJ cord-279343-ybncwweg 146 11 variation variation NN cord-279343-ybncwweg 146 12 in in IN cord-279343-ybncwweg 146 13 the the DT cord-279343-ybncwweg 146 14 hinge hinge NN cord-279343-ybncwweg 146 15 angle angle NN cord-279343-ybncwweg 146 16 between between IN cord-279343-ybncwweg 146 17 the the DT cord-279343-ybncwweg 146 18 receptor receptor NN cord-279343-ybncwweg 146 19 CRD crd NN cord-279343-ybncwweg 146 20 and and CC cord-279343-ybncwweg 146 21 repeat repeat NN cord-279343-ybncwweg 146 22 domains domain NNS cord-279343-ybncwweg 146 23 of of IN cord-279343-ybncwweg 146 24 DC DC NNP cord-279343-ybncwweg 146 25 - - HYPH cord-279343-ybncwweg 146 26 SIGNR SIGNR NNP cord-279343-ybncwweg 146 27 illustrate illustrate VBP cord-279343-ybncwweg 146 28 the the DT cord-279343-ybncwweg 146 29 built build VBN cord-279343-ybncwweg 146 30 - - HYPH cord-279343-ybncwweg 146 31 in in RP cord-279343-ybncwweg 146 32 flexibilities flexibility NNS cord-279343-ybncwweg 146 33 in in IN cord-279343-ybncwweg 146 34 both both CC cord-279343-ybncwweg 146 35 the the DT cord-279343-ybncwweg 146 36 receptor receptor NN cord-279343-ybncwweg 146 37 and and CC cord-279343-ybncwweg 146 38 ligands ligand NNS cord-279343-ybncwweg 146 39 , , , cord-279343-ybncwweg 146 40 and and CC cord-279343-ybncwweg 146 41 thus thus RB cord-279343-ybncwweg 146 42 lend lend VB cord-279343-ybncwweg 146 43 some some DT cord-279343-ybncwweg 146 44 degree degree NN cord-279343-ybncwweg 146 45 of of IN cord-279343-ybncwweg 146 46 freedom freedom NN cord-279343-ybncwweg 146 47 to to IN cord-279343-ybncwweg 146 48 the the DT cord-279343-ybncwweg 146 49 receptor receptor NN cord-279343-ybncwweg 146 50 - - HYPH cord-279343-ybncwweg 146 51 ligand ligand NN cord-279343-ybncwweg 146 52 recognition recognition NN cord-279343-ybncwweg 146 53 . . . cord-279343-ybncwweg 147 1 These these DT cord-279343-ybncwweg 147 2 intrinsic intrinsic JJ cord-279343-ybncwweg 147 3 flexibilities flexibility NNS cord-279343-ybncwweg 147 4 would would MD cord-279343-ybncwweg 147 5 lead lead VB cord-279343-ybncwweg 147 6 to to IN cord-279343-ybncwweg 147 7 greater great JJR cord-279343-ybncwweg 147 8 variability variability NN cord-279343-ybncwweg 147 9 in in IN cord-279343-ybncwweg 147 10 distance distance NN cord-279343-ybncwweg 147 11 and and CC cord-279343-ybncwweg 147 12 orientation orientation NN cord-279343-ybncwweg 147 13 , , , cord-279343-ybncwweg 147 14 and and CC cord-279343-ybncwweg 147 15 marginalize marginalize VB cord-279343-ybncwweg 147 16 the the DT cord-279343-ybncwweg 147 17 geometric geometric JJ cord-279343-ybncwweg 147 18 constraint constraint NN cord-279343-ybncwweg 147 19 . . . cord-279343-ybncwweg 148 1 Nonetheless nonetheless RB cord-279343-ybncwweg 148 2 , , , cord-279343-ybncwweg 148 3 the the DT cord-279343-ybncwweg 148 4 most most RBS cord-279343-ybncwweg 148 5 obvious obvious JJ cord-279343-ybncwweg 148 6 reasons reason NNS cord-279343-ybncwweg 148 7 to to TO cord-279343-ybncwweg 148 8 use use VB cord-279343-ybncwweg 148 9 the the DT cord-279343-ybncwweg 148 10 surface surface NN cord-279343-ybncwweg 148 11 area area NN cord-279343-ybncwweg 148 12 of of IN cord-279343-ybncwweg 148 13 CRD CRD NNP cord-279343-ybncwweg 148 14 instead instead RB cord-279343-ybncwweg 148 15 of of IN cord-279343-ybncwweg 148 16 the the DT cord-279343-ybncwweg 148 17 distance distance NN cord-279343-ybncwweg 148 18 are be VBP cord-279343-ybncwweg 148 19 ( ( -LRB- cord-279343-ybncwweg 148 20 1 1 CD cord-279343-ybncwweg 148 21 ) ) -RRB- cord-279343-ybncwweg 148 22 to to TO cord-279343-ybncwweg 148 23 enable enable VB cord-279343-ybncwweg 148 24 us -PRON- PRP cord-279343-ybncwweg 148 25 to to TO cord-279343-ybncwweg 148 26 derive derive VB cord-279343-ybncwweg 148 27 a a DT cord-279343-ybncwweg 148 28 prediction prediction NN cord-279343-ybncwweg 148 29 scheme scheme NN cord-279343-ybncwweg 148 30 based base VBN cord-279343-ybncwweg 148 31 on on IN cord-279343-ybncwweg 148 32 surface surface NN cord-279343-ybncwweg 148 33 glycan glycan NN cord-279343-ybncwweg 148 34 density density NN cord-279343-ybncwweg 148 35 of of IN cord-279343-ybncwweg 148 36 a a DT cord-279343-ybncwweg 148 37 potential potential JJ cord-279343-ybncwweg 148 38 ligand ligand NN cord-279343-ybncwweg 148 39 , , , cord-279343-ybncwweg 148 40 and and CC cord-279343-ybncwweg 148 41 ( ( -LRB- cord-279343-ybncwweg 148 42 2 2 LS cord-279343-ybncwweg 148 43 ) ) -RRB- cord-279343-ybncwweg 148 44 to to TO cord-279343-ybncwweg 148 45 have have VB cord-279343-ybncwweg 148 46 the the DT cord-279343-ybncwweg 148 47 prediction prediction NN cord-279343-ybncwweg 148 48 less less RBR cord-279343-ybncwweg 148 49 dependent dependent JJ cord-279343-ybncwweg 148 50 on on IN cord-279343-ybncwweg 148 51 the the DT cord-279343-ybncwweg 148 52 precise precise JJ cord-279343-ybncwweg 148 53 conformation conformation NN cord-279343-ybncwweg 148 54 , , , cord-279343-ybncwweg 148 55 thus thus RB cord-279343-ybncwweg 148 56 , , , cord-279343-ybncwweg 148 57 the the DT cord-279343-ybncwweg 148 58 degree degree NN cord-279343-ybncwweg 148 59 of of IN cord-279343-ybncwweg 148 60 correctness correctness NN cord-279343-ybncwweg 148 61 , , , cord-279343-ybncwweg 148 62 of of IN cord-279343-ybncwweg 148 63 the the DT cord-279343-ybncwweg 148 64 tetramer tetramer NN cord-279343-ybncwweg 148 65 model model NN cord-279343-ybncwweg 148 66 . . . cord-279343-ybncwweg 149 1 In in IN cord-279343-ybncwweg 149 2 addition addition NN cord-279343-ybncwweg 149 3 , , , cord-279343-ybncwweg 149 4 equation equation NN cord-279343-ybncwweg 149 5 ( ( -LRB- cord-279343-ybncwweg 149 6 1 1 CD cord-279343-ybncwweg 149 7 ) ) -RRB- cord-279343-ybncwweg 149 8 assumes assume VBZ cord-279343-ybncwweg 149 9 a a DT cord-279343-ybncwweg 149 10 globular globular JJ cord-279343-ybncwweg 149 11 shape shape NN cord-279343-ybncwweg 149 12 for for IN cord-279343-ybncwweg 149 13 proteins protein NNS cord-279343-ybncwweg 149 14 and and CC cord-279343-ybncwweg 149 15 a a DT cord-279343-ybncwweg 149 16 uniform uniform JJ cord-279343-ybncwweg 149 17 distribution distribution NN cord-279343-ybncwweg 149 18 of of IN cord-279343-ybncwweg 149 19 their -PRON- PRP$ cord-279343-ybncwweg 149 20 glycosylation glycosylation NN cord-279343-ybncwweg 149 21 . . . cord-279343-ybncwweg 150 1 Clearly clearly RB cord-279343-ybncwweg 150 2 , , , cord-279343-ybncwweg 150 3 both both CC cord-279343-ybncwweg 150 4 the the DT cord-279343-ybncwweg 150 5 local local JJ cord-279343-ybncwweg 150 6 distribution distribution NN cord-279343-ybncwweg 150 7 of of IN cord-279343-ybncwweg 150 8 glycans glycan NNS cord-279343-ybncwweg 150 9 and and CC cord-279343-ybncwweg 150 10 the the DT cord-279343-ybncwweg 150 11 actual actual JJ cord-279343-ybncwweg 150 12 shape shape NN cord-279343-ybncwweg 150 13 of of IN cord-279343-ybncwweg 150 14 the the DT cord-279343-ybncwweg 150 15 protein protein NN cord-279343-ybncwweg 150 16 presenting present VBG cord-279343-ybncwweg 150 17 the the DT cord-279343-ybncwweg 150 18 glycans glycan NNS cord-279343-ybncwweg 150 19 influence influence VBP cord-279343-ybncwweg 150 20 the the DT cord-279343-ybncwweg 150 21 receptor receptor NN cord-279343-ybncwweg 150 22 recognition recognition NN cord-279343-ybncwweg 150 23 . . . cord-279343-ybncwweg 151 1 For for IN cord-279343-ybncwweg 151 2 example example NN cord-279343-ybncwweg 151 3 , , , cord-279343-ybncwweg 151 4 despite despite IN cord-279343-ybncwweg 151 5 a a DT cord-279343-ybncwweg 151 6 low low JJ cord-279343-ybncwweg 151 7 score score NN cord-279343-ybncwweg 151 8 for for IN cord-279343-ybncwweg 151 9 Dengue dengue NN cord-279343-ybncwweg 151 10 and and CC cord-279343-ybncwweg 151 11 hemorrhagic hemorrhagic JJ cord-279343-ybncwweg 151 12 fever fever NN cord-279343-ybncwweg 151 13 , , , cord-279343-ybncwweg 151 14 evidence evidence NN cord-279343-ybncwweg 151 15 suggests suggest VBZ cord-279343-ybncwweg 151 16 that that IN cord-279343-ybncwweg 151 17 these these DT cord-279343-ybncwweg 151 18 viruses virus NNS cord-279343-ybncwweg 151 19 are be VBP cord-279343-ybncwweg 151 20 recognized recognize VBN cord-279343-ybncwweg 151 21 by by IN cord-279343-ybncwweg 151 22 DC DC NNP cord-279343-ybncwweg 151 23 - - HYPH cord-279343-ybncwweg 151 24 SIGN SIGN NNP cord-279343-ybncwweg 151 25 / / SYM cord-279343-ybncwweg 151 26 R. R. NNP cord-279343-ybncwweg 151 27 28 28 CD cord-279343-ybncwweg 151 28 , , , cord-279343-ybncwweg 151 29 29 29 CD cord-279343-ybncwweg 152 1 Although although IN cord-279343-ybncwweg 152 2 the the DT cord-279343-ybncwweg 152 3 Dengue Dengue NNP cord-279343-ybncwweg 152 4 virus virus NN cord-279343-ybncwweg 152 5 envelope envelope NN cord-279343-ybncwweg 152 6 protein protein NN cord-279343-ybncwweg 152 7 is be VBZ cord-279343-ybncwweg 152 8 not not RB cord-279343-ybncwweg 152 9 heavily heavily RB cord-279343-ybncwweg 152 10 glycosylated glycosylate VBN cord-279343-ybncwweg 152 11 , , , cord-279343-ybncwweg 153 1 the the DT cord-279343-ybncwweg 153 2 crystal crystal NN cord-279343-ybncwweg 153 3 structures structure NNS cord-279343-ybncwweg 153 4 of of IN cord-279343-ybncwweg 153 5 both both CC cord-279343-ybncwweg 153 6 the the DT cord-279343-ybncwweg 153 7 type type NN cord-279343-ybncwweg 153 8 2 2 CD cord-279343-ybncwweg 153 9 and and CC cord-279343-ybncwweg 153 10 type type NN cord-279343-ybncwweg 153 11 3 3 CD cord-279343-ybncwweg 153 12 Dengue dengue NN cord-279343-ybncwweg 153 13 envelope envelope NN cord-279343-ybncwweg 153 14 protein protein NN cord-279343-ybncwweg 153 15 E e NN cord-279343-ybncwweg 153 16 showed show VBD cord-279343-ybncwweg 153 17 that that IN cord-279343-ybncwweg 153 18 the the DT cord-279343-ybncwweg 153 19 two two CD cord-279343-ybncwweg 153 20 conserved conserved JJ cord-279343-ybncwweg 153 21 glycosylation glycosylation NN cord-279343-ybncwweg 153 22 sites site NNS cord-279343-ybncwweg 153 23 are be VBP cord-279343-ybncwweg 153 24 located locate VBN cord-279343-ybncwweg 153 25 at at IN cord-279343-ybncwweg 153 26 the the DT cord-279343-ybncwweg 153 27 protein protein NN cord-279343-ybncwweg 153 28 dimer dimer NN cord-279343-ybncwweg 153 29 interface interface NN cord-279343-ybncwweg 153 30 , , , cord-279343-ybncwweg 153 31 resulting result VBG cord-279343-ybncwweg 153 32 in in IN cord-279343-ybncwweg 153 33 four four CD cord-279343-ybncwweg 153 34 glycans glycan NNS cord-279343-ybncwweg 153 35 distributed distribute VBN cord-279343-ybncwweg 153 36 symmetrically symmetrically RB cord-279343-ybncwweg 153 37 at at IN cord-279343-ybncwweg 153 38 w32 w32 NNP cord-279343-ybncwweg 153 39 Å å NN cord-279343-ybncwweg 153 40 apart apart RB cord-279343-ybncwweg 153 41 across across IN cord-279343-ybncwweg 153 42 the the DT cord-279343-ybncwweg 153 43 interface interface NN cord-279343-ybncwweg 153 44 . . . cord-279343-ybncwweg 154 1 30 30 CD cord-279343-ybncwweg 154 2 , , , cord-279343-ybncwweg 154 3 31 31 CD cord-279343-ybncwweg 154 4 This this DT cord-279343-ybncwweg 154 5 generates generate VBZ cord-279343-ybncwweg 154 6 four four CD cord-279343-ybncwweg 154 7 closely closely RB cord-279343-ybncwweg 154 8 packed pack VBN cord-279343-ybncwweg 154 9 glycan glycan NN cord-279343-ybncwweg 154 10 residues residue NNS cord-279343-ybncwweg 154 11 , , , cord-279343-ybncwweg 154 12 which which WDT cord-279343-ybncwweg 154 13 enables enable VBZ cord-279343-ybncwweg 154 14 the the DT cord-279343-ybncwweg 154 15 recognition recognition NN cord-279343-ybncwweg 154 16 by by IN cord-279343-ybncwweg 154 17 the the DT cord-279343-ybncwweg 154 18 tetrameric tetrameric JJ cord-279343-ybncwweg 154 19 DC DC NNP cord-279343-ybncwweg 154 20 - - HYPH cord-279343-ybncwweg 154 21 SIGN SIGN NNP cord-279343-ybncwweg 154 22 . . . cord-279343-ybncwweg 155 1 This this DT cord-279343-ybncwweg 155 2 equation equation NN cord-279343-ybncwweg 155 3 is be VBZ cord-279343-ybncwweg 155 4 thus thus RB cord-279343-ybncwweg 155 5 a a DT cord-279343-ybncwweg 155 6 first first JJ cord-279343-ybncwweg 155 7 - - HYPH cord-279343-ybncwweg 155 8 order order NN cord-279343-ybncwweg 155 9 approximation approximation NN cord-279343-ybncwweg 155 10 that that WDT cord-279343-ybncwweg 155 11 does do VBZ cord-279343-ybncwweg 155 12 not not RB cord-279343-ybncwweg 155 13 reflect reflect VB cord-279343-ybncwweg 155 14 variations variation NNS cord-279343-ybncwweg 155 15 in in IN cord-279343-ybncwweg 155 16 protein protein NN cord-279343-ybncwweg 155 17 shape shape NN cord-279343-ybncwweg 155 18 or or CC cord-279343-ybncwweg 155 19 distribution distribution NN cord-279343-ybncwweg 155 20 of of IN cord-279343-ybncwweg 155 21 glycosylation glycosylation NN cord-279343-ybncwweg 155 22 . . . cord-279343-ybncwweg 156 1 In in IN cord-279343-ybncwweg 156 2 conclusion conclusion NN cord-279343-ybncwweg 156 3 , , , cord-279343-ybncwweg 156 4 the the DT cord-279343-ybncwweg 156 5 mechanism mechanism NN cord-279343-ybncwweg 156 6 of of IN cord-279343-ybncwweg 156 7 receptor receptor NN cord-279343-ybncwweg 156 8 - - HYPH cord-279343-ybncwweg 156 9 carbohydrate carbohydrate NN cord-279343-ybncwweg 156 10 recognition recognition NN cord-279343-ybncwweg 156 11 may may MD cord-279343-ybncwweg 156 12 be be VB cord-279343-ybncwweg 156 13 more more RBR cord-279343-ybncwweg 156 14 complicated complicated JJ cord-279343-ybncwweg 156 15 than than IN cord-279343-ybncwweg 156 16 previously previously RB cord-279343-ybncwweg 156 17 thought think VBN cord-279343-ybncwweg 156 18 . . . cord-279343-ybncwweg 157 1 The the DT cord-279343-ybncwweg 157 2 high high JJ cord-279343-ybncwweg 157 3 - - HYPH cord-279343-ybncwweg 157 4 affinity affinity NN cord-279343-ybncwweg 157 5 binding binding NN cord-279343-ybncwweg 157 6 strategy strategy NN cord-279343-ybncwweg 157 7 employed employ VBN cord-279343-ybncwweg 157 8 by by IN cord-279343-ybncwweg 157 9 these these DT cord-279343-ybncwweg 157 10 receptors receptor NNS cord-279343-ybncwweg 157 11 appears appear VBZ cord-279343-ybncwweg 157 12 to to TO cord-279343-ybncwweg 157 13 be be VB cord-279343-ybncwweg 157 14 twofold twofold JJ cord-279343-ybncwweg 157 15 . . . cord-279343-ybncwweg 158 1 First first RB cord-279343-ybncwweg 158 2 , , , cord-279343-ybncwweg 158 3 the the DT cord-279343-ybncwweg 158 4 structure structure NN cord-279343-ybncwweg 158 5 of of IN cord-279343-ybncwweg 158 6 each each DT cord-279343-ybncwweg 158 7 individual individual JJ cord-279343-ybncwweg 158 8 CRD crd NN cord-279343-ybncwweg 158 9 determines determine VBZ cord-279343-ybncwweg 158 10 the the DT cord-279343-ybncwweg 158 11 preference preference NN cord-279343-ybncwweg 158 12 of of IN cord-279343-ybncwweg 158 13 the the DT cord-279343-ybncwweg 158 14 receptor receptor NN cord-279343-ybncwweg 158 15 for for IN cord-279343-ybncwweg 158 16 particular particular JJ cord-279343-ybncwweg 158 17 carbohydrate carbohydrate NN cord-279343-ybncwweg 158 18 structures structure NNS cord-279343-ybncwweg 158 19 . . . cord-279343-ybncwweg 159 1 Secondly secondly RB cord-279343-ybncwweg 159 2 , , , cord-279343-ybncwweg 159 3 and and CC cord-279343-ybncwweg 159 4 perhaps perhaps RB cord-279343-ybncwweg 159 5 more more RBR cord-279343-ybncwweg 159 6 importantly importantly RB cord-279343-ybncwweg 159 7 , , , cord-279343-ybncwweg 159 8 the the DT cord-279343-ybncwweg 159 9 high high JJ cord-279343-ybncwweg 159 10 - - HYPH cord-279343-ybncwweg 159 11 affinity affinity NN cord-279343-ybncwweg 159 12 interaction interaction NN cord-279343-ybncwweg 159 13 as as RB cord-279343-ybncwweg 159 14 well well RB cord-279343-ybncwweg 159 15 as as IN cord-279343-ybncwweg 159 16 ligand ligand NN cord-279343-ybncwweg 159 17 specificity specificity NN cord-279343-ybncwweg 159 18 rely rely VBP cord-279343-ybncwweg 159 19 on on IN cord-279343-ybncwweg 159 20 receptor receptor NN cord-279343-ybncwweg 159 21 oligomerization oligomerization NN cord-279343-ybncwweg 159 22 , , , cord-279343-ybncwweg 159 23 which which WDT cord-279343-ybncwweg 159 24 would would MD cord-279343-ybncwweg 159 25 increase increase VB cord-279343-ybncwweg 159 26 the the DT cord-279343-ybncwweg 159 27 affinity affinity NN cord-279343-ybncwweg 159 28 of of IN cord-279343-ybncwweg 159 29 ligand ligand NN cord-279343-ybncwweg 159 30 binding binding NN cord-279343-ybncwweg 159 31 and and CC cord-279343-ybncwweg 159 32 impose impose VB cord-279343-ybncwweg 159 33 constraints constraint NNS cord-279343-ybncwweg 159 34 on on IN cord-279343-ybncwweg 159 35 the the DT cord-279343-ybncwweg 159 36 density density NN cord-279343-ybncwweg 159 37 and and CC cord-279343-ybncwweg 159 38 distribution distribution NN cord-279343-ybncwweg 159 39 of of IN cord-279343-ybncwweg 159 40 carbohydrates carbohydrate NNS cord-279343-ybncwweg 159 41 found find VBN cord-279343-ybncwweg 159 42 on on IN cord-279343-ybncwweg 159 43 target target NN cord-279343-ybncwweg 159 44 pathogens pathogen NNS cord-279343-ybncwweg 159 45 . . . cord-279343-ybncwweg 160 1 Protein protein NN cord-279343-ybncwweg 160 2 expression expression NN cord-279343-ybncwweg 160 3 , , , cord-279343-ybncwweg 160 4 purification purification NN cord-279343-ybncwweg 160 5 and and CC cord-279343-ybncwweg 160 6 crystallization crystallization NN cord-279343-ybncwweg 160 7 DNA dna NN cord-279343-ybncwweg 160 8 encoding encoding NN cord-279343-ybncwweg 160 9 amino amino NN cord-279343-ybncwweg 160 10 acid acid NN cord-279343-ybncwweg 160 11 residues residue NNS cord-279343-ybncwweg 160 12 250 250 CD cord-279343-ybncwweg 160 13 - - SYM cord-279343-ybncwweg 160 14 399 399 CD cord-279343-ybncwweg 160 15 of of IN cord-279343-ybncwweg 160 16 the the DT cord-279343-ybncwweg 160 17 human human JJ cord-279343-ybncwweg 160 18 DC DC NNP cord-279343-ybncwweg 160 19 - - HYPH cord-279343-ybncwweg 160 20 SIGNR SIGNR NNP cord-279343-ybncwweg 160 21 , , , cord-279343-ybncwweg 160 22 which which WDT cord-279343-ybncwweg 160 23 includes include VBZ cord-279343-ybncwweg 160 24 the the DT cord-279343-ybncwweg 160 25 last last JJ cord-279343-ybncwweg 160 26 repeat repeat NN cord-279343-ybncwweg 160 27 ( ( -LRB- cord-279343-ybncwweg 160 28 R8 R8 NNP cord-279343-ybncwweg 160 29 ) ) -RRB- cord-279343-ybncwweg 160 30 and and CC cord-279343-ybncwweg 160 31 the the DT cord-279343-ybncwweg 160 32 CRD crd NN cord-279343-ybncwweg 160 33 , , , cord-279343-ybncwweg 160 34 referred refer VBD cord-279343-ybncwweg 160 35 as as IN cord-279343-ybncwweg 160 36 DC DC NNP cord-279343-ybncwweg 160 37 - - HYPH cord-279343-ybncwweg 160 38 SIGNR SIGNR NNP cord-279343-ybncwweg 160 39 R8 R8 NNP cord-279343-ybncwweg 160 40 , , , cord-279343-ybncwweg 160 41 was be VBD cord-279343-ybncwweg 160 42 inserted insert VBN cord-279343-ybncwweg 160 43 into into IN cord-279343-ybncwweg 160 44 the the DT cord-279343-ybncwweg 160 45 pET pET NNP cord-279343-ybncwweg 160 46 22b 22b CD cord-279343-ybncwweg 160 47 vector vector NN cord-279343-ybncwweg 160 48 ( ( -LRB- cord-279343-ybncwweg 160 49 Figure figure NN cord-279343-ybncwweg 160 50 1(a 1(a CD cord-279343-ybncwweg 160 51 ) ) -RRB- cord-279343-ybncwweg 160 52 ) ) -RRB- cord-279343-ybncwweg 160 53 . . . cord-279343-ybncwweg 161 1 The the DT cord-279343-ybncwweg 161 2 expression expression NN cord-279343-ybncwweg 161 3 of of IN cord-279343-ybncwweg 161 4 the the DT cord-279343-ybncwweg 161 5 full full JJ cord-279343-ybncwweg 161 6 - - HYPH cord-279343-ybncwweg 161 7 length length NN cord-279343-ybncwweg 161 8 extracellular extracellular JJ cord-279343-ybncwweg 161 9 domain domain NN cord-279343-ybncwweg 161 10 of of IN cord-279343-ybncwweg 161 11 DC DC NNP cord-279343-ybncwweg 161 12 - - HYPH cord-279343-ybncwweg 161 13 SIGN SIGN NNP cord-279343-ybncwweg 161 14 and and CC cord-279343-ybncwweg 161 15 DC DC NNP cord-279343-ybncwweg 161 16 - - HYPH cord-279343-ybncwweg 161 17 SIGNR SIGNR NNP cord-279343-ybncwweg 161 18 has have VBZ cord-279343-ybncwweg 161 19 been be VBN cord-279343-ybncwweg 161 20 described describe VBN cord-279343-ybncwweg 161 21 . . . cord-279343-ybncwweg 162 1 21 21 CD cord-279343-ybncwweg 162 2 Proteins protein NNS cord-279343-ybncwweg 162 3 were be VBD cord-279343-ybncwweg 162 4 expressed express VBN cord-279343-ybncwweg 162 5 as as IN cord-279343-ybncwweg 162 6 inclusion inclusion NN cord-279343-ybncwweg 162 7 bodies body NNS cord-279343-ybncwweg 162 8 in in IN cord-279343-ybncwweg 162 9 Escherichia Escherichia NNP cord-279343-ybncwweg 162 10 coli coli NNS cord-279343-ybncwweg 163 1 BL21 BL21 NNP cord-279343-ybncwweg 163 2 ( ( -LRB- cord-279343-ybncwweg 163 3 DE3 DE3 NNP cord-279343-ybncwweg 163 4 ) ) -RRB- cord-279343-ybncwweg 163 5 and and CC cord-279343-ybncwweg 163 6 reconstituted reconstitute VBN cord-279343-ybncwweg 163 7 in in IN cord-279343-ybncwweg 163 8 vitro vitro FW cord-279343-ybncwweg 163 9 . . . cord-279343-ybncwweg 164 1 Refolded Refolded NNP cord-279343-ybncwweg 164 2 DC DC NNP cord-279343-ybncwweg 164 3 - - HYPH cord-279343-ybncwweg 164 4 SIGNR SIGNR NNP cord-279343-ybncwweg 164 5 R8 R8 NNP cord-279343-ybncwweg 164 6 was be VBD cord-279343-ybncwweg 164 7 loaded load VBN cord-279343-ybncwweg 164 8 onto onto IN cord-279343-ybncwweg 164 9 a a DT cord-279343-ybncwweg 164 10 Source source NN cord-279343-ybncwweg 164 11 15Q 15Q NNP cord-279343-ybncwweg 164 12 column column NN cord-279343-ybncwweg 164 13 ( ( -LRB- cord-279343-ybncwweg 164 14 Amersham Amersham NNP cord-279343-ybncwweg 164 15 ) ) -RRB- cord-279343-ybncwweg 164 16 and and CC cord-279343-ybncwweg 164 17 further further RB cord-279343-ybncwweg 164 18 purified purify VBN cord-279343-ybncwweg 164 19 by by IN cord-279343-ybncwweg 164 20 size size NN cord-279343-ybncwweg 164 21 - - HYPH cord-279343-ybncwweg 164 22 exclusion exclusion NN cord-279343-ybncwweg 164 23 chromatography chromatography NN cord-279343-ybncwweg 164 24 using use VBG cord-279343-ybncwweg 164 25 a a DT cord-279343-ybncwweg 164 26 Superdex Superdex NNP cord-279343-ybncwweg 164 27 S200 S200 NNP cord-279343-ybncwweg 164 28 column column NN cord-279343-ybncwweg 164 29 ( ( -LRB- cord-279343-ybncwweg 164 30 Amersham Amersham NNP cord-279343-ybncwweg 164 31 ) ) -RRB- cord-279343-ybncwweg 164 32 . . . cord-279343-ybncwweg 165 1 The the DT cord-279343-ybncwweg 165 2 peak peak NN cord-279343-ybncwweg 165 3 fractions fraction NNS cord-279343-ybncwweg 165 4 were be VBD cord-279343-ybncwweg 165 5 then then RB cord-279343-ybncwweg 165 6 concentrated concentrate VBN cord-279343-ybncwweg 165 7 to to IN cord-279343-ybncwweg 165 8 10 10 CD cord-279343-ybncwweg 165 9 mg mg NNP cord-279343-ybncwweg 165 10 / / SYM cord-279343-ybncwweg 165 11 ml ml NN cord-279343-ybncwweg 165 12 and and CC cord-279343-ybncwweg 165 13 characterized characterize VBD cord-279343-ybncwweg 165 14 using use VBG cord-279343-ybncwweg 165 15 SDS SDS NNP cord-279343-ybncwweg 165 16 - - HYPH cord-279343-ybncwweg 165 17 PAGE PAGE NNP cord-279343-ybncwweg 165 18 , , , cord-279343-ybncwweg 165 19 N n CD cord-279343-ybncwweg 165 20 - - HYPH cord-279343-ybncwweg 165 21 terminal terminal NN cord-279343-ybncwweg 165 22 sequencing sequencing NN cord-279343-ybncwweg 165 23 and and CC cord-279343-ybncwweg 165 24 mass mass NN cord-279343-ybncwweg 165 25 spectrometry spectrometry NN cord-279343-ybncwweg 165 26 . . . cord-279343-ybncwweg 166 1 Initial initial JJ cord-279343-ybncwweg 166 2 crystallization crystallization NN cord-279343-ybncwweg 166 3 screening screening NN cord-279343-ybncwweg 166 4 trials trial NNS cord-279343-ybncwweg 166 5 were be VBD cord-279343-ybncwweg 166 6 carried carry VBN cord-279343-ybncwweg 166 7 out out RP cord-279343-ybncwweg 166 8 by by IN cord-279343-ybncwweg 166 9 microbatch microbatch NN cord-279343-ybncwweg 166 10 experiments experiment NNS cord-279343-ybncwweg 166 11 using use VBG cord-279343-ybncwweg 166 12 an an DT cord-279343-ybncwweg 166 13 automated automate VBN cord-279343-ybncwweg 166 14 crystallization crystallization NN cord-279343-ybncwweg 166 15 robot robot NN cord-279343-ybncwweg 166 16 ( ( -LRB- cord-279343-ybncwweg 166 17 Douglas Douglas NNP cord-279343-ybncwweg 166 18 Instruments Instruments NNP cord-279343-ybncwweg 166 19 Oryx Oryx NNP cord-279343-ybncwweg 166 20 6 6 CD cord-279343-ybncwweg 166 21 ) ) -RRB- cord-279343-ybncwweg 166 22 . . . cord-279343-ybncwweg 167 1 32 32 CD cord-279343-ybncwweg 167 2 , , , cord-279343-ybncwweg 167 3 33 33 CD cord-279343-ybncwweg 167 4 Repeated repeat VBN cord-279343-ybncwweg 167 5 attempts attempt NNS cord-279343-ybncwweg 167 6 to to TO cord-279343-ybncwweg 167 7 crystallize crystallize VB cord-279343-ybncwweg 167 8 the the DT cord-279343-ybncwweg 167 9 entire entire JJ cord-279343-ybncwweg 167 10 ectodomain ectodomain NN cord-279343-ybncwweg 167 11 of of IN cord-279343-ybncwweg 167 12 either either DT cord-279343-ybncwweg 167 13 DC DC NNP cord-279343-ybncwweg 167 14 - - HYPH cord-279343-ybncwweg 167 15 SIGN SIGN NNP cord-279343-ybncwweg 167 16 or or CC cord-279343-ybncwweg 167 17 DC DC NNP cord-279343-ybncwweg 167 18 - - HYPH cord-279343-ybncwweg 167 19 SIGNR SIGNR NNP cord-279343-ybncwweg 167 20 did do VBD cord-279343-ybncwweg 167 21 not not RB cord-279343-ybncwweg 167 22 yield yield VB cord-279343-ybncwweg 167 23 any any DT cord-279343-ybncwweg 167 24 diffraction diffraction NN cord-279343-ybncwweg 167 25 - - HYPH cord-279343-ybncwweg 167 26 quality quality NN cord-279343-ybncwweg 167 27 crystals crystal NNS cord-279343-ybncwweg 167 28 . . . cord-279343-ybncwweg 168 1 In in IN cord-279343-ybncwweg 168 2 contrast contrast NN cord-279343-ybncwweg 168 3 , , , cord-279343-ybncwweg 168 4 rod rod NN cord-279343-ybncwweg 168 5 - - HYPH cord-279343-ybncwweg 168 6 like like JJ cord-279343-ybncwweg 168 7 crystals crystal NNS cord-279343-ybncwweg 168 8 of of IN cord-279343-ybncwweg 168 9 the the DT cord-279343-ybncwweg 168 10 DC DC NNP cord-279343-ybncwweg 168 11 - - HYPH cord-279343-ybncwweg 168 12 SIGNR SIGNR NNP cord-279343-ybncwweg 168 13 R8 r8 NN cord-279343-ybncwweg 168 14 construct construct NN cord-279343-ybncwweg 168 15 appeared appear VBN cord-279343-ybncwweg 168 16 in in IN cord-279343-ybncwweg 168 17 many many JJ cord-279343-ybncwweg 168 18 conditions condition NNS cord-279343-ybncwweg 168 19 within within IN cord-279343-ybncwweg 168 20 six six CD cord-279343-ybncwweg 168 21 hours hour NNS cord-279343-ybncwweg 168 22 of of IN cord-279343-ybncwweg 168 23 setup setup NN cord-279343-ybncwweg 168 24 . . . cord-279343-ybncwweg 169 1 Optimization optimization NN cord-279343-ybncwweg 169 2 of of IN cord-279343-ybncwweg 169 3 crystal crystal NN cord-279343-ybncwweg 169 4 growth growth NN cord-279343-ybncwweg 169 5 conditions condition NNS cord-279343-ybncwweg 169 6 was be VBD cord-279343-ybncwweg 169 7 performed perform VBN cord-279343-ybncwweg 169 8 by by IN cord-279343-ybncwweg 169 9 fine fine JJ cord-279343-ybncwweg 169 10 - - HYPH cord-279343-ybncwweg 169 11 screening screening NN cord-279343-ybncwweg 169 12 of of IN cord-279343-ybncwweg 169 13 pH ph NN cord-279343-ybncwweg 169 14 and and CC cord-279343-ybncwweg 169 15 precipitant precipitant JJ cord-279343-ybncwweg 169 16 concentration concentration NN cord-279343-ybncwweg 169 17 . . . cord-279343-ybncwweg 170 1 Crystals crystal NNS cord-279343-ybncwweg 170 2 used use VBD cord-279343-ybncwweg 170 3 for for IN cord-279343-ybncwweg 170 4 X x NN cord-279343-ybncwweg 170 5 - - NN cord-279343-ybncwweg 170 6 ray ray NN cord-279343-ybncwweg 170 7 data datum NNS cord-279343-ybncwweg 170 8 collection collection NN cord-279343-ybncwweg 170 9 were be VBD cord-279343-ybncwweg 170 10 grown grow VBN cord-279343-ybncwweg 170 11 by by IN cord-279343-ybncwweg 170 12 the the DT cord-279343-ybncwweg 170 13 hanging hanging NN cord-279343-ybncwweg 170 14 - - HYPH cord-279343-ybncwweg 170 15 drop drop NN cord-279343-ybncwweg 170 16 , , , cord-279343-ybncwweg 170 17 vapordiffusion vapordiffusion NN cord-279343-ybncwweg 170 18 method method NN cord-279343-ybncwweg 170 19 in in IN cord-279343-ybncwweg 170 20 a a DT cord-279343-ybncwweg 170 21 well well JJ cord-279343-ybncwweg 170 22 solution solution NN cord-279343-ybncwweg 170 23 of of IN cord-279343-ybncwweg 170 24 100 100 CD cord-279343-ybncwweg 170 25 mM mm CD cord-279343-ybncwweg 170 26 MgCl MgCl NNP cord-279343-ybncwweg 170 27 2 2 CD cord-279343-ybncwweg 170 28 , , , cord-279343-ybncwweg 170 29 100 100 CD cord-279343-ybncwweg 170 30 mM mm CD cord-279343-ybncwweg 170 31 sodium sodium NN cord-279343-ybncwweg 170 32 cacodylate cacodylate NN cord-279343-ybncwweg 170 33 ( ( -LRB- cord-279343-ybncwweg 170 34 pH pH NNP cord-279343-ybncwweg 170 35 6.5 6.5 CD cord-279343-ybncwweg 170 36 ) ) -RRB- cord-279343-ybncwweg 170 37 , , , cord-279343-ybncwweg 170 38 12 12 CD cord-279343-ybncwweg 170 39 % % NN cord-279343-ybncwweg 170 40 ( ( -LRB- cord-279343-ybncwweg 170 41 w w NN cord-279343-ybncwweg 170 42 / / SYM cord-279343-ybncwweg 170 43 v v NN cord-279343-ybncwweg 170 44 ) ) -RRB- cord-279343-ybncwweg 170 45 polyethylene polyethylene NN cord-279343-ybncwweg 170 46 glycol glycol NN cord-279343-ybncwweg 170 47 3000 3000 CD cord-279343-ybncwweg 170 48 . . . cord-279343-ybncwweg 171 1 Crystals crystal NNS cord-279343-ybncwweg 171 2 of of IN cord-279343-ybncwweg 171 3 DC DC NNP cord-279343-ybncwweg 171 4 - - HYPH cord-279343-ybncwweg 171 5 SIGNR SIGNR NNP cord-279343-ybncwweg 171 6 R8 R8 NNP cord-279343-ybncwweg 171 7 were be VBD cord-279343-ybncwweg 171 8 briefly briefly RB cord-279343-ybncwweg 171 9 transferred transfer VBN cord-279343-ybncwweg 171 10 into into IN cord-279343-ybncwweg 171 11 well well JJ cord-279343-ybncwweg 171 12 solution solution NN cord-279343-ybncwweg 171 13 supplemented supplement VBN cord-279343-ybncwweg 171 14 with with IN cord-279343-ybncwweg 171 15 20 20 CD cord-279343-ybncwweg 171 16 % % NN cord-279343-ybncwweg 171 17 ( ( -LRB- cord-279343-ybncwweg 171 18 v v NN cord-279343-ybncwweg 171 19 / / SYM cord-279343-ybncwweg 171 20 v v NN cord-279343-ybncwweg 171 21 ) ) -RRB- cord-279343-ybncwweg 171 22 glycerol glycerol NN cord-279343-ybncwweg 171 23 and and CC cord-279343-ybncwweg 171 24 flash flash NN cord-279343-ybncwweg 171 25 - - HYPH cord-279343-ybncwweg 171 26 frozen freeze VBN cord-279343-ybncwweg 171 27 in in IN cord-279343-ybncwweg 171 28 a a DT cord-279343-ybncwweg 171 29 liquid liquid JJ cord-279343-ybncwweg 171 30 nitrogen nitrogen NN cord-279343-ybncwweg 171 31 stream stream NN cord-279343-ybncwweg 171 32 at at IN cord-279343-ybncwweg 171 33 100 100 CD cord-279343-ybncwweg 171 34 K. K. NNP cord-279343-ybncwweg 172 1 The the DT cord-279343-ybncwweg 172 2 X x NN cord-279343-ybncwweg 172 3 - - NN cord-279343-ybncwweg 172 4 ray ray NN cord-279343-ybncwweg 172 5 diffraction diffraction NN cord-279343-ybncwweg 172 6 data datum NNS cord-279343-ybncwweg 172 7 were be VBD cord-279343-ybncwweg 172 8 collected collect VBN cord-279343-ybncwweg 172 9 on on IN cord-279343-ybncwweg 172 10 a a DT cord-279343-ybncwweg 172 11 3X3 3x3 CD cord-279343-ybncwweg 172 12 chargecoupled chargecoupled JJ cord-279343-ybncwweg 172 13 device device NN cord-279343-ybncwweg 172 14 detector detector NN cord-279343-ybncwweg 172 15 at at IN cord-279343-ybncwweg 172 16 the the DT cord-279343-ybncwweg 172 17 Structural Structural NNP cord-279343-ybncwweg 172 18 Biology Biology NNP cord-279343-ybncwweg 172 19 Center Center NNP cord-279343-ybncwweg 172 20 Collaborative Collaborative NNP cord-279343-ybncwweg 172 21 Access Access NNP cord-279343-ybncwweg 172 22 Team Team NNP cord-279343-ybncwweg 172 23 beamline beamline NN cord-279343-ybncwweg 172 24 19ID 19id CD cord-279343-ybncwweg 172 25 and and CC cord-279343-ybncwweg 172 26 processed process VBN cord-279343-ybncwweg 172 27 using use VBG cord-279343-ybncwweg 172 28 HKL2000 HKL2000 NNP cord-279343-ybncwweg 172 29 . . . cord-279343-ybncwweg 173 1 34 34 CD cord-279343-ybncwweg 174 1 The the DT cord-279343-ybncwweg 174 2 crystals crystal NNS cord-279343-ybncwweg 174 3 diffracted diffract VBN cord-279343-ybncwweg 174 4 to to IN cord-279343-ybncwweg 174 5 1.41 1.41 CD cord-279343-ybncwweg 174 6 Å å NN cord-279343-ybncwweg 174 7 and and CC cord-279343-ybncwweg 174 8 were be VBD cord-279343-ybncwweg 174 9 indexed index VBN cord-279343-ybncwweg 174 10 to to IN cord-279343-ybncwweg 174 11 the the DT cord-279343-ybncwweg 174 12 orthorhombic orthorhombic JJ cord-279343-ybncwweg 174 13 space space NN cord-279343-ybncwweg 174 14 group group NN cord-279343-ybncwweg 174 15 P2 P2 NNP cord-279343-ybncwweg 174 16 1 1 CD cord-279343-ybncwweg 174 17 2 2 CD cord-279343-ybncwweg 174 18 1 1 CD cord-279343-ybncwweg 174 19 2 2 CD cord-279343-ybncwweg 174 20 1 1 CD cord-279343-ybncwweg 174 21 with with IN cord-279343-ybncwweg 174 22 cell cell NN cord-279343-ybncwweg 174 23 dimensions dimension NNS cord-279343-ybncwweg 174 24 aZ38.2 az38.2 IN cord-279343-ybncwweg 174 25 Å å NN cord-279343-ybncwweg 174 26 , , , cord-279343-ybncwweg 174 27 bZ54.8 bZ54.8 NNP cord-279343-ybncwweg 174 28 Å å NN cord-279343-ybncwweg 174 29 , , , cord-279343-ybncwweg 174 30 and and CC cord-279343-ybncwweg 174 31 cZ62.3 cZ62.3 NNP cord-279343-ybncwweg 174 32 Å Å NNP cord-279343-ybncwweg 174 33 . . . cord-279343-ybncwweg 175 1 Molecular molecular JJ cord-279343-ybncwweg 175 2 replacement replacement NN cord-279343-ybncwweg 175 3 using use VBG cord-279343-ybncwweg 175 4 the the DT cord-279343-ybncwweg 175 5 coordinates coordinate NNS cord-279343-ybncwweg 175 6 for for IN cord-279343-ybncwweg 175 7 DC DC NNP cord-279343-ybncwweg 175 8 - - HYPH cord-279343-ybncwweg 175 9 SIGNR SIGNR NNP cord-279343-ybncwweg 175 10 CRD crd NN cord-279343-ybncwweg 176 1 ( ( -LRB- cord-279343-ybncwweg 176 2 PDB PDB NNP cord-279343-ybncwweg 176 3 accession accession NN cord-279343-ybncwweg 176 4 code code NN cord-279343-ybncwweg 176 5 1K9J 1k9j CD cord-279343-ybncwweg 176 6 ) ) -RRB- cord-279343-ybncwweg 176 7 provided provide VBD cord-279343-ybncwweg 176 8 phase phase NN cord-279343-ybncwweg 176 9 information information NN cord-279343-ybncwweg 176 10 . . . cord-279343-ybncwweg 177 1 18 18 CD cord-279343-ybncwweg 177 2 Diffraction diffraction NN cord-279343-ybncwweg 177 3 data datum NNS cord-279343-ybncwweg 177 4 from from IN cord-279343-ybncwweg 177 5 41 41 CD cord-279343-ybncwweg 177 6 - - SYM cord-279343-ybncwweg 177 7 3.0 3.0 CD cord-279343-ybncwweg 177 8 Å å NN cord-279343-ybncwweg 177 9 were be VBD cord-279343-ybncwweg 177 10 used use VBN cord-279343-ybncwweg 177 11 for for IN cord-279343-ybncwweg 177 12 the the DT cord-279343-ybncwweg 177 13 rotation rotation NN cord-279343-ybncwweg 177 14 and and CC cord-279343-ybncwweg 177 15 translation translation NN cord-279343-ybncwweg 177 16 functions function NNS cord-279343-ybncwweg 177 17 with with IN cord-279343-ybncwweg 177 18 the the DT cord-279343-ybncwweg 177 19 program program NN cord-279343-ybncwweg 177 20 AMoRe amore NN cord-279343-ybncwweg 177 21 . . . cord-279343-ybncwweg 177 22 35 35 CD cord-279343-ybncwweg 177 23 After after IN cord-279343-ybncwweg 177 24 rigid rigid JJ cord-279343-ybncwweg 177 25 body body NN cord-279343-ybncwweg 177 26 refinement refinement NN cord-279343-ybncwweg 177 27 using use VBG cord-279343-ybncwweg 177 28 program program NN cord-279343-ybncwweg 177 29 packages package NNS cord-279343-ybncwweg 177 30 AMoRe AMoRe NNP cord-279343-ybncwweg 177 31 and and CC cord-279343-ybncwweg 177 32 CNS CNS NNP cord-279343-ybncwweg 177 33 . . . cord-279343-ybncwweg 178 1 36 36 CD cord-279343-ybncwweg 179 1 A a DT cord-279343-ybncwweg 179 2 complete complete JJ cord-279343-ybncwweg 179 3 model model NN cord-279343-ybncwweg 179 4 was be VBD cord-279343-ybncwweg 179 5 built build VBN cord-279343-ybncwweg 179 6 with with IN cord-279343-ybncwweg 179 7 the the DT cord-279343-ybncwweg 179 8 occupancies occupancy NNS cord-279343-ybncwweg 179 9 for for IN cord-279343-ybncwweg 179 10 disordered disordered JJ cord-279343-ybncwweg 179 11 side side NN cord-279343-ybncwweg 179 12 - - HYPH cord-279343-ybncwweg 179 13 chains chain NNS cord-279343-ybncwweg 179 14 and and CC cord-279343-ybncwweg 179 15 loops loop NNS cord-279343-ybncwweg 179 16 set set VBN cord-279343-ybncwweg 179 17 to to IN cord-279343-ybncwweg 179 18 zero zero CD cord-279343-ybncwweg 179 19 . . . cord-279343-ybncwweg 180 1 Initial initial JJ cord-279343-ybncwweg 180 2 refinement refinement NN cord-279343-ybncwweg 180 3 in in IN cord-279343-ybncwweg 180 4 CNS CNS NNP cord-279343-ybncwweg 180 5 included include VBD cord-279343-ybncwweg 180 6 simulated simulated JJ cord-279343-ybncwweg 180 7 annealing annealing NN cord-279343-ybncwweg 180 8 , , , cord-279343-ybncwweg 180 9 conjugate conjugate JJ cord-279343-ybncwweg 180 10 gradient gradient NN cord-279343-ybncwweg 180 11 minimization minimization NN cord-279343-ybncwweg 180 12 and and CC cord-279343-ybncwweg 180 13 individual individual JJ cord-279343-ybncwweg 180 14 temperature temperature NN cord-279343-ybncwweg 180 15 factor factor NN cord-279343-ybncwweg 180 16 refinement refinement NN cord-279343-ybncwweg 180 17 . . . cord-279343-ybncwweg 181 1 Further further JJ cord-279343-ybncwweg 181 2 refinement refinement NN cord-279343-ybncwweg 181 3 using use VBG cord-279343-ybncwweg 181 4 maximum maximum JJ cord-279343-ybncwweg 181 5 likelihood likelihood NN cord-279343-ybncwweg 181 6 methods method NNS cord-279343-ybncwweg 181 7 was be VBD cord-279343-ybncwweg 181 8 performed perform VBN cord-279343-ybncwweg 181 9 with with IN cord-279343-ybncwweg 181 10 the the DT cord-279343-ybncwweg 181 11 program program NN cord-279343-ybncwweg 181 12 Refmac Refmac NNP cord-279343-ybncwweg 181 13 5 5 CD cord-279343-ybncwweg 181 14 . . . cord-279343-ybncwweg 182 1 35 35 CD cord-279343-ybncwweg 183 1 The the DT cord-279343-ybncwweg 183 2 final final JJ cord-279343-ybncwweg 183 3 geometry geometry NN cord-279343-ybncwweg 183 4 of of IN cord-279343-ybncwweg 183 5 the the DT cord-279343-ybncwweg 183 6 structure structure NN cord-279343-ybncwweg 183 7 was be VBD cord-279343-ybncwweg 183 8 evaluated evaluate VBN cord-279343-ybncwweg 183 9 using use VBG cord-279343-ybncwweg 183 10 the the DT cord-279343-ybncwweg 183 11 program program NN cord-279343-ybncwweg 183 12 PROCHECK PROCHECK NNP cord-279343-ybncwweg 183 13 . . . cord-279343-ybncwweg 184 1 37 37 CD cord-279343-ybncwweg 184 2 Least Least JJS cord-279343-ybncwweg 184 3 - - HYPH cord-279343-ybncwweg 184 4 squares square NNS cord-279343-ybncwweg 184 5 superpositions superposition NNS cord-279343-ybncwweg 184 6 were be VBD cord-279343-ybncwweg 184 7 performed perform VBN cord-279343-ybncwweg 184 8 using use VBG cord-279343-ybncwweg 184 9 the the DT cord-279343-ybncwweg 184 10 program program NN cord-279343-ybncwweg 184 11 LSQMAN LSQMAN NNP cord-279343-ybncwweg 184 12 . . . cord-279343-ybncwweg 185 1 38 38 CD cord-279343-ybncwweg 185 2 Modeling modeling NN cord-279343-ybncwweg 185 3 of of IN cord-279343-ybncwweg 185 4 the the DT cord-279343-ybncwweg 185 5 DC DC NNP cord-279343-ybncwweg 185 6 - - HYPH cord-279343-ybncwweg 185 7 SIGN SIGN NNP cord-279343-ybncwweg 185 8 tetramer tetramer NN cord-279343-ybncwweg 185 9 A a DT cord-279343-ybncwweg 185 10 protein protein NN cord-279343-ybncwweg 185 11 search search NN cord-279343-ybncwweg 185 12 using use VBG cord-279343-ybncwweg 185 13 the the DT cord-279343-ybncwweg 185 14 program program NN cord-279343-ybncwweg 185 15 BLASTp BLASTp NNS cord-279343-ybncwweg 185 16 for for IN cord-279343-ybncwweg 185 17 sequences sequence NNS cord-279343-ybncwweg 185 18 corresponding correspond VBG cord-279343-ybncwweg 185 19 to to IN cord-279343-ybncwweg 185 20 one one CD cord-279343-ybncwweg 185 21 , , , cord-279343-ybncwweg 185 22 two two CD cord-279343-ybncwweg 185 23 , , , cord-279343-ybncwweg 185 24 three three CD cord-279343-ybncwweg 185 25 , , , cord-279343-ybncwweg 185 26 four four CD cord-279343-ybncwweg 185 27 and and CC cord-279343-ybncwweg 185 28 all all DT cord-279343-ybncwweg 185 29 eight eight CD cord-279343-ybncwweg 185 30 repeat repeat NN cord-279343-ybncwweg 185 31 domains domain NNS cord-279343-ybncwweg 185 32 of of IN cord-279343-ybncwweg 185 33 DC DC NNP cord-279343-ybncwweg 185 34 - - HYPH cord-279343-ybncwweg 185 35 SIGNR SIGNR NNP cord-279343-ybncwweg 185 36 in in IN cord-279343-ybncwweg 185 37 various various JJ cord-279343-ybncwweg 185 38 combinations combination NNS cord-279343-ybncwweg 185 39 was be VBD cord-279343-ybncwweg 185 40 used use VBN cord-279343-ybncwweg 185 41 to to TO cord-279343-ybncwweg 185 42 query query VB cord-279343-ybncwweg 185 43 the the DT cord-279343-ybncwweg 185 44 PDB PDB NNP cord-279343-ybncwweg 185 45 . . . cord-279343-ybncwweg 186 1 39 39 CD cord-279343-ybncwweg 187 1 From from IN cord-279343-ybncwweg 187 2 this this DT cord-279343-ybncwweg 187 3 search search NN cord-279343-ybncwweg 187 4 we -PRON- PRP cord-279343-ybncwweg 187 5 identified identify VBD cord-279343-ybncwweg 187 6 a a DT cord-279343-ybncwweg 187 7 representative representative JJ cord-279343-ybncwweg 187 8 set set NN cord-279343-ybncwweg 187 9 of of IN cord-279343-ybncwweg 187 10 structures structure NNS cord-279343-ybncwweg 187 11 that that WDT cord-279343-ybncwweg 187 12 includes include VBZ cord-279343-ybncwweg 187 13 focal focal JJ cord-279343-ybncwweg 187 14 adhesion adhesion NN cord-279343-ybncwweg 187 15 kinases kinase NNS cord-279343-ybncwweg 187 16 , , , cord-279343-ybncwweg 187 17 Taq Taq NNP cord-279343-ybncwweg 187 18 Muts Muts NNP cord-279343-ybncwweg 187 19 and and CC cord-279343-ybncwweg 187 20 DNA dna NN cord-279343-ybncwweg 187 21 - - HYPH cord-279343-ybncwweg 187 22 binding bind VBG cord-279343-ybncwweg 187 23 proteins protein NNS cord-279343-ybncwweg 187 24 , , , cord-279343-ybncwweg 187 25 with with IN cord-279343-ybncwweg 187 26 sequence sequence NN cord-279343-ybncwweg 187 27 identity identity NN cord-279343-ybncwweg 187 28 of of IN cord-279343-ybncwweg 187 29 30 30 CD cord-279343-ybncwweg 187 30 - - SYM cord-279343-ybncwweg 187 31 70 70 CD cord-279343-ybncwweg 187 32 % % NN cord-279343-ybncwweg 187 33 ( ( -LRB- cord-279343-ybncwweg 187 34 PDB PDB NNP cord-279343-ybncwweg 187 35 accession accession NN cord-279343-ybncwweg 187 36 codes code VBZ cord-279343-ybncwweg 187 37 1K05 1k05 CD cord-279343-ybncwweg 187 38 , , , cord-279343-ybncwweg 187 39 1P85 1p85 CD cord-279343-ybncwweg 187 40 , , , cord-279343-ybncwweg 187 41 1IOM 1iom CD cord-279343-ybncwweg 187 42 , , , cord-279343-ybncwweg 187 43 1NNE 1nne CD cord-279343-ybncwweg 187 44 , , , cord-279343-ybncwweg 187 45 1NKW 1nkw CD cord-279343-ybncwweg 187 46 , , , cord-279343-ybncwweg 187 47 1EWR 1ewr CD cord-279343-ybncwweg 187 48 , , , cord-279343-ybncwweg 187 49 1ITW 1itw CD cord-279343-ybncwweg 187 50 and and CC cord-279343-ybncwweg 187 51 1HP7 1hp7 CD cord-279343-ybncwweg 187 52 ) ) -RRB- cord-279343-ybncwweg 187 53 . . . cord-279343-ybncwweg 188 1 The the DT cord-279343-ybncwweg 188 2 homologous homologous JJ cord-279343-ybncwweg 188 3 portions portion NNS cord-279343-ybncwweg 188 4 of of IN cord-279343-ybncwweg 188 5 these these DT cord-279343-ybncwweg 188 6 structures structure NNS cord-279343-ybncwweg 188 7 were be VBD cord-279343-ybncwweg 188 8 aligned align VBN cord-279343-ybncwweg 188 9 on on IN cord-279343-ybncwweg 188 10 the the DT cord-279343-ybncwweg 188 11 basis basis NN cord-279343-ybncwweg 188 12 of of IN cord-279343-ybncwweg 188 13 sequence sequence NN cord-279343-ybncwweg 188 14 homology homology NN cord-279343-ybncwweg 188 15 to to IN cord-279343-ybncwweg 188 16 each each DT cord-279343-ybncwweg 188 17 corresponding corresponding JJ cord-279343-ybncwweg 188 18 repeat repeat NN cord-279343-ybncwweg 188 19 subunit subunit NN cord-279343-ybncwweg 188 20 of of IN cord-279343-ybncwweg 188 21 DC DC NNP cord-279343-ybncwweg 188 22 - - HYPH cord-279343-ybncwweg 188 23 SIGNR SIGNR NNP cord-279343-ybncwweg 188 24 , , , cord-279343-ybncwweg 188 25 and and CC cord-279343-ybncwweg 188 26 their -PRON- PRP$ cord-279343-ybncwweg 188 27 secondary secondary JJ cord-279343-ybncwweg 188 28 structure structure NN cord-279343-ybncwweg 188 29 was be VBD cord-279343-ybncwweg 188 30 viewed view VBN cord-279343-ybncwweg 188 31 using use VBG cord-279343-ybncwweg 188 32 the the DT cord-279343-ybncwweg 188 33 program program NN cord-279343-ybncwweg 188 34 O. O. NNP cord-279343-ybncwweg 188 35 40 40 CD cord-279343-ybncwweg 189 1 The the DT cord-279343-ybncwweg 189 2 structure structure NN cord-279343-ybncwweg 189 3 of of IN cord-279343-ybncwweg 189 4 the the DT cord-279343-ybncwweg 189 5 focal focal JJ cord-279343-ybncwweg 189 6 adhesion adhesion NN cord-279343-ybncwweg 189 7 kinase kinase NN cord-279343-ybncwweg 189 8 ( ( -LRB- cord-279343-ybncwweg 189 9 PDB PDB NNP cord-279343-ybncwweg 189 10 code code NN cord-279343-ybncwweg 189 11 1K05 1k05 CD cord-279343-ybncwweg 189 12 ) ) -RRB- cord-279343-ybncwweg 189 13 was be VBD cord-279343-ybncwweg 189 14 used use VBN cord-279343-ybncwweg 189 15 as as IN cord-279343-ybncwweg 189 16 a a DT cord-279343-ybncwweg 189 17 template template NN cord-279343-ybncwweg 189 18 for for IN cord-279343-ybncwweg 189 19 tetramer tetramer NN cord-279343-ybncwweg 189 20 formation formation NN cord-279343-ybncwweg 189 21 , , , cord-279343-ybncwweg 189 22 with with IN cord-279343-ybncwweg 189 23 the the DT cord-279343-ybncwweg 189 24 additional additional JJ cord-279343-ybncwweg 189 25 structures structure NNS cord-279343-ybncwweg 189 26 being be VBG cord-279343-ybncwweg 189 27 used use VBN cord-279343-ybncwweg 189 28 primarily primarily RB cord-279343-ybncwweg 189 29 to to TO cord-279343-ybncwweg 189 30 predict predict VB cord-279343-ybncwweg 189 31 location location NN cord-279343-ybncwweg 189 32 of of IN cord-279343-ybncwweg 189 33 turns turn NNS cord-279343-ybncwweg 189 34 . . . cord-279343-ybncwweg 190 1 The the DT cord-279343-ybncwweg 190 2 final final JJ cord-279343-ybncwweg 190 3 model model NN cord-279343-ybncwweg 190 4 was be VBD cord-279343-ybncwweg 190 5 refined refine VBN cord-279343-ybncwweg 190 6 in in IN cord-279343-ybncwweg 190 7 CNS CNS NNP cord-279343-ybncwweg 190 8 using use VBG cord-279343-ybncwweg 190 9 rigid rigid JJ cord-279343-ybncwweg 190 10 body body NN cord-279343-ybncwweg 190 11 and and CC cord-279343-ybncwweg 190 12 energy energy NN cord-279343-ybncwweg 190 13 minimization minimization NN cord-279343-ybncwweg 190 14 . . . cord-279343-ybncwweg 191 1 Ribbon ribbon NN cord-279343-ybncwweg 191 2 diagrams diagram NNS cord-279343-ybncwweg 191 3 were be VBD cord-279343-ybncwweg 191 4 prepared prepare VBN cord-279343-ybncwweg 191 5 using use VBG cord-279343-ybncwweg 191 6 the the DT cord-279343-ybncwweg 191 7 program program NN cord-279343-ybncwweg 191 8 MOLSCRIPT MOLSCRIPT NNP cord-279343-ybncwweg 191 9 . . . cord-279343-ybncwweg 192 1 41 41 CD cord-279343-ybncwweg 193 1 Evaluating evaluate VBG cord-279343-ybncwweg 193 2 potential potential JJ cord-279343-ybncwweg 193 3 ligands ligand NNS cord-279343-ybncwweg 193 4 of of IN cord-279343-ybncwweg 193 5 DC DC NNP cord-279343-ybncwweg 193 6 - - HYPH cord-279343-ybncwweg 193 7 SIGN SIGN NNP cord-279343-ybncwweg 193 8 / / SYM cord-279343-ybncwweg 193 9 R r NN cord-279343-ybncwweg 193 10 Since since IN cord-279343-ybncwweg 193 11 both both DT cord-279343-ybncwweg 193 12 receptors receptor NNS cord-279343-ybncwweg 193 13 use use VBP cord-279343-ybncwweg 193 14 multiple multiple JJ cord-279343-ybncwweg 193 15 CRD crd NN cord-279343-ybncwweg 193 16 domains domain NNS cord-279343-ybncwweg 193 17 to to TO cord-279343-ybncwweg 193 18 modulate modulate VB cord-279343-ybncwweg 193 19 avidity avidity NN cord-279343-ybncwweg 193 20 - - HYPH cord-279343-ybncwweg 193 21 mediated mediate VBN cord-279343-ybncwweg 193 22 binding binding NN cord-279343-ybncwweg 193 23 to to IN cord-279343-ybncwweg 193 24 various various JJ cord-279343-ybncwweg 193 25 carbohydrates carbohydrate NNS cord-279343-ybncwweg 193 26 found find VBN cord-279343-ybncwweg 193 27 on on IN cord-279343-ybncwweg 193 28 a a DT cord-279343-ybncwweg 193 29 variety variety NN cord-279343-ybncwweg 193 30 of of IN cord-279343-ybncwweg 193 31 pathogens pathogen NNS cord-279343-ybncwweg 193 32 , , , cord-279343-ybncwweg 193 33 we -PRON- PRP cord-279343-ybncwweg 193 34 derived derive VBD cord-279343-ybncwweg 193 35 a a DT cord-279343-ybncwweg 193 36 formula formula NN cord-279343-ybncwweg 193 37 to to TO cord-279343-ybncwweg 193 38 evaluate evaluate VB cord-279343-ybncwweg 193 39 and and CC cord-279343-ybncwweg 193 40 identify identify VB cord-279343-ybncwweg 193 41 potential potential JJ cord-279343-ybncwweg 193 42 receptor receptor NN cord-279343-ybncwweg 193 43 ligands ligand NNS cord-279343-ybncwweg 193 44 . . . cord-279343-ybncwweg 194 1 Let let VB cord-279343-ybncwweg 194 2 the the DT cord-279343-ybncwweg 194 3 surface surface NN cord-279343-ybncwweg 194 4 area area NN cord-279343-ybncwweg 194 5 encompassed encompass VBN cord-279343-ybncwweg 194 6 by by IN cord-279343-ybncwweg 194 7 the the DT cord-279343-ybncwweg 194 8 tetramer tetramer NN cord-279343-ybncwweg 194 9 of of IN cord-279343-ybncwweg 194 10 DC DC NNP cord-279343-ybncwweg 194 11 - - HYPH cord-279343-ybncwweg 194 12 SIGNR SIGNR NNP cord-279343-ybncwweg 194 13 CRD crd NN cord-279343-ybncwweg 194 14 be be VBP cord-279343-ybncwweg 194 15 S s NN cord-279343-ybncwweg 194 16 o o NN cord-279343-ybncwweg 194 17 , , , cord-279343-ybncwweg 195 1 the the DT cord-279343-ybncwweg 195 2 surface surface NN cord-279343-ybncwweg 195 3 area area NN cord-279343-ybncwweg 195 4 of of IN cord-279343-ybncwweg 195 5 a a DT cord-279343-ybncwweg 195 6 protein protein NN cord-279343-ybncwweg 195 7 of of IN cord-279343-ybncwweg 195 8 interest interest NN cord-279343-ybncwweg 195 9 be be VB cord-279343-ybncwweg 195 10 S S NNP cord-279343-ybncwweg 195 11 , , , cord-279343-ybncwweg 195 12 then then RB cord-279343-ybncwweg 195 13 the the DT cord-279343-ybncwweg 195 14 binding binding NN cord-279343-ybncwweg 195 15 of of IN cord-279343-ybncwweg 195 16 DC DC NNP cord-279343-ybncwweg 195 17 - - HYPH cord-279343-ybncwweg 195 18 SIGN SIGN NNP cord-279343-ybncwweg 195 19 / / SYM cord-279343-ybncwweg 195 20 R r NN cord-279343-ybncwweg 195 21 requires require VBZ cord-279343-ybncwweg 195 22 the the DT cord-279343-ybncwweg 195 23 number number NN cord-279343-ybncwweg 195 24 of of IN cord-279343-ybncwweg 195 25 glycosylations glycosylation NNS cord-279343-ybncwweg 195 26 N n CD cord-279343-ybncwweg 195 27 satisfying satisfying NN cord-279343-ybncwweg 195 28 : : : cord-279343-ybncwweg 195 29 The the DT cord-279343-ybncwweg 195 30 Structure Structure NNP cord-279343-ybncwweg 195 31 of of IN cord-279343-ybncwweg 195 32 DC DC NNP cord-279343-ybncwweg 195 33 - - HYPH cord-279343-ybncwweg 195 34 SIGNR SIGNR NNP cord-279343-ybncwweg 195 35 N= N= NNP cord-279343-ybncwweg 196 1 SO so RB cord-279343-ybncwweg 196 2 4= 4= CD cord-279343-ybncwweg 197 1 S s NN cord-279343-ybncwweg 197 2 o o NN cord-279343-ybncwweg 198 1 Thus thus RB cord-279343-ybncwweg 198 2 , , , cord-279343-ybncwweg 198 3 an an DT cord-279343-ybncwweg 198 4 index index NN cord-279343-ybncwweg 198 5 for for IN cord-279343-ybncwweg 198 6 potential potential JJ cord-279343-ybncwweg 198 7 ligands ligand NNS cord-279343-ybncwweg 198 8 can can MD cord-279343-ybncwweg 198 9 be be VB cord-279343-ybncwweg 198 10 defined define VBN cord-279343-ybncwweg 198 11 as as IN cord-279343-ybncwweg 198 12 : : : cord-279343-ybncwweg 198 13 When when WRB cord-279343-ybncwweg 198 14 the the DT cord-279343-ybncwweg 198 15 likelihood likelihood NN cord-279343-ybncwweg 198 16 index index NN cord-279343-ybncwweg 198 17 i i PRP cord-279343-ybncwweg 198 18 is be VBZ cord-279343-ybncwweg 198 19 greater great JJR cord-279343-ybncwweg 198 20 than than IN cord-279343-ybncwweg 198 21 1 1 CD cord-279343-ybncwweg 198 22 , , , cord-279343-ybncwweg 198 23 the the DT cord-279343-ybncwweg 198 24 protein protein NN cord-279343-ybncwweg 198 25 of of IN cord-279343-ybncwweg 198 26 interest interest NN cord-279343-ybncwweg 198 27 possess possess VBP cord-279343-ybncwweg 198 28 , , , cord-279343-ybncwweg 198 29 on on IN cord-279343-ybncwweg 198 30 average average JJ cord-279343-ybncwweg 198 31 , , , cord-279343-ybncwweg 198 32 higher high JJR cord-279343-ybncwweg 198 33 glycosylation glycosylation NN cord-279343-ybncwweg 198 34 density density NN cord-279343-ybncwweg 198 35 than than IN cord-279343-ybncwweg 198 36 is be VBZ cord-279343-ybncwweg 198 37 required require VBN cord-279343-ybncwweg 198 38 for for IN cord-279343-ybncwweg 198 39 binding bind VBG cord-279343-ybncwweg 198 40 to to IN cord-279343-ybncwweg 198 41 DC DC NNP cord-279343-ybncwweg 198 42 - - HYPH cord-279343-ybncwweg 198 43 SIGN SIGN NNP cord-279343-ybncwweg 198 44 / / SYM cord-279343-ybncwweg 198 45 R r NN cord-279343-ybncwweg 198 46 and and CC cord-279343-ybncwweg 198 47 , , , cord-279343-ybncwweg 198 48 conversely conversely RB cord-279343-ybncwweg 198 49 , , , cord-279343-ybncwweg 198 50 when when WRB cord-279343-ybncwweg 198 51 i i PRP cord-279343-ybncwweg 198 52 is be VBZ cord-279343-ybncwweg 198 53 less less JJR cord-279343-ybncwweg 198 54 than than IN cord-279343-ybncwweg 198 55 1 1 CD cord-279343-ybncwweg 198 56 , , , cord-279343-ybncwweg 198 57 the the DT cord-279343-ybncwweg 198 58 target target NN cord-279343-ybncwweg 198 59 protein protein NN cord-279343-ybncwweg 198 60 is be VBZ cord-279343-ybncwweg 198 61 under under IN cord-279343-ybncwweg 198 62 glycosylated glycosylate VBN cord-279343-ybncwweg 198 63 for for IN cord-279343-ybncwweg 198 64 DC DC NNP cord-279343-ybncwweg 198 65 - - HYPH cord-279343-ybncwweg 198 66 SIGN SIGN NNP cord-279343-ybncwweg 198 67 / / SYM cord-279343-ybncwweg 198 68 R r NN cord-279343-ybncwweg 198 69 binding binding NN cord-279343-ybncwweg 198 70 . . . cord-279343-ybncwweg 199 1 Assuming assume VBG cord-279343-ybncwweg 199 2 a a DT cord-279343-ybncwweg 199 3 spherical spherical JJ cord-279343-ybncwweg 199 4 nature nature NN cord-279343-ybncwweg 199 5 for for IN cord-279343-ybncwweg 199 6 proteins protein NNS cord-279343-ybncwweg 199 7 , , , cord-279343-ybncwweg 199 8 which which WDT cord-279343-ybncwweg 199 9 is be VBZ cord-279343-ybncwweg 199 10 only only RB cord-279343-ybncwweg 199 11 a a DT cord-279343-ybncwweg 199 12 crude crude JJ cord-279343-ybncwweg 199 13 approximation approximation NN cord-279343-ybncwweg 199 14 but but CC cord-279343-ybncwweg 199 15 will will MD cord-279343-ybncwweg 199 16 nonetheless nonetheless RB cord-279343-ybncwweg 199 17 result result VB cord-279343-ybncwweg 199 18 in in IN cord-279343-ybncwweg 199 19 a a DT cord-279343-ybncwweg 199 20 correct correct JJ cord-279343-ybncwweg 199 21 power power NN cord-279343-ybncwweg 199 22 - - HYPH cord-279343-ybncwweg 199 23 dependence dependence NN cord-279343-ybncwweg 199 24 on on IN cord-279343-ybncwweg 199 25 the the DT cord-279343-ybncwweg 199 26 molecular molecular JJ cord-279343-ybncwweg 199 27 mass mass NN cord-279343-ybncwweg 199 28 , , , cord-279343-ybncwweg 199 29 the the DT cord-279343-ybncwweg 199 30 surface surface NN cord-279343-ybncwweg 199 31 area area NN cord-279343-ybncwweg 199 32 S s NN cord-279343-ybncwweg 199 33 of of IN cord-279343-ybncwweg 199 34 a a DT cord-279343-ybncwweg 199 35 given give VBN cord-279343-ybncwweg 199 36 protein protein NN cord-279343-ybncwweg 199 37 can can MD cord-279343-ybncwweg 199 38 be be VB cord-279343-ybncwweg 199 39 calculated calculate VBN cord-279343-ybncwweg 199 40 , , , cord-279343-ybncwweg 199 41 to to IN cord-279343-ybncwweg 199 42 the the DT cord-279343-ybncwweg 199 43 first first JJ cord-279343-ybncwweg 199 44 approximation approximation NN cord-279343-ybncwweg 199 45 , , , cord-279343-ybncwweg 199 46 from from IN cord-279343-ybncwweg 199 47 its -PRON- PRP$ cord-279343-ybncwweg 199 48 molecular molecular JJ cord-279343-ybncwweg 199 49 mass mass NN cord-279343-ybncwweg 199 50 by by IN cord-279343-ybncwweg 199 51 : : : cord-279343-ybncwweg 199 52 where where WRB cord-279343-ybncwweg 199 53 N N NNP cord-279343-ybncwweg 199 54 A A NNP cord-279343-ybncwweg 199 55 is be VBZ cord-279343-ybncwweg 199 56 Avogadro Avogadro NNP cord-279343-ybncwweg 199 57 's 's POS cord-279343-ybncwweg 199 58 constant constant JJ cord-279343-ybncwweg 199 59 ( ( -LRB- cord-279343-ybncwweg 199 60 6.022!10 6.022!10 CD cord-279343-ybncwweg 199 61 23 23 CD cord-279343-ybncwweg 199 62 ) ) -RRB- cord-279343-ybncwweg 199 63 , , , cord-279343-ybncwweg 199 64 M M NNP cord-279343-ybncwweg 199 65 is be VBZ cord-279343-ybncwweg 199 66 the the DT cord-279343-ybncwweg 199 67 molecular molecular JJ cord-279343-ybncwweg 199 68 mass mass NN cord-279343-ybncwweg 199 69 ( ( -LRB- cord-279343-ybncwweg 199 70 in in IN cord-279343-ybncwweg 199 71 Da Da NNP cord-279343-ybncwweg 199 72 ) ) -RRB- cord-279343-ybncwweg 199 73 , , , cord-279343-ybncwweg 199 74 and and CC cord-279343-ybncwweg 199 75 D D NNP cord-279343-ybncwweg 199 76 is be VBZ cord-279343-ybncwweg 199 77 the the DT cord-279343-ybncwweg 199 78 average average JJ cord-279343-ybncwweg 199 79 density density NN cord-279343-ybncwweg 199 80 of of IN cord-279343-ybncwweg 199 81 a a DT cord-279343-ybncwweg 199 82 protein protein NN cord-279343-ybncwweg 199 83 , , , cord-279343-ybncwweg 199 84 which which WDT cord-279343-ybncwweg 199 85 has have VBZ cord-279343-ybncwweg 199 86 a a DT cord-279343-ybncwweg 199 87 value value NN cord-279343-ybncwweg 199 88 of of IN cord-279343-ybncwweg 199 89 1.3 1.3 CD cord-279343-ybncwweg 199 90 - - SYM cord-279343-ybncwweg 199 91 1.4 1.4 CD cord-279343-ybncwweg 199 92 g g NN cord-279343-ybncwweg 199 93 / / SYM cord-279343-ybncwweg 199 94 ml ml NN cord-279343-ybncwweg 199 95 . . . cord-279343-ybncwweg 200 1 42 42 CD cord-279343-ybncwweg 201 1 If if IN cord-279343-ybncwweg 201 2 DZ1.4 DZ1.4 NNP cord-279343-ybncwweg 201 3 g g NNP cord-279343-ybncwweg 201 4 / / SYM cord-279343-ybncwweg 201 5 ml ml NN cord-279343-ybncwweg 201 6 is be VBZ cord-279343-ybncwweg 201 7 taken take VBN cord-279343-ybncwweg 201 8 and and CC cord-279343-ybncwweg 201 9 equation equation NN cord-279343-ybncwweg 201 10 ( ( -LRB- cord-279343-ybncwweg 201 11 3 3 CD cord-279343-ybncwweg 201 12 ) ) -RRB- cord-279343-ybncwweg 201 13 is be VBZ cord-279343-ybncwweg 201 14 substituted substitute VBN cord-279343-ybncwweg 201 15 in in IN cord-279343-ybncwweg 201 16 equation equation NN cord-279343-ybncwweg 201 17 ( ( -LRB- cord-279343-ybncwweg 201 18 2 2 CD cord-279343-ybncwweg 201 19 ) ) -RRB- cord-279343-ybncwweg 201 20 , , , cord-279343-ybncwweg 201 21 then then RB cord-279343-ybncwweg 201 22 : : : cord-279343-ybncwweg 201 23 where where WRB cord-279343-ybncwweg 201 24 S s NN cord-279343-ybncwweg 201 25 o o NN cord-279343-ybncwweg 201 26 is be VBZ cord-279343-ybncwweg 201 27 in in IN cord-279343-ybncwweg 201 28 Å Å NNP cord-279343-ybncwweg 201 29 2 2 CD cord-279343-ybncwweg 201 30 . . . cord-279343-ybncwweg 202 1 Coordinates coordinate NNS cord-279343-ybncwweg 202 2 have have VBP cord-279343-ybncwweg 202 3 been be VBN cord-279343-ybncwweg 202 4 deposited deposit VBN cord-279343-ybncwweg 202 5 with with IN cord-279343-ybncwweg 202 6 the the DT cord-279343-ybncwweg 202 7 Protein Protein NNP cord-279343-ybncwweg 202 8 Data Data NNP cord-279343-ybncwweg 202 9 Bank Bank NNP cord-279343-ybncwweg 202 10 under under IN cord-279343-ybncwweg 202 11 accession accession NNP cord-279343-ybncwweg 202 12 code code NN cord-279343-ybncwweg 202 13 1XPH 1xph CD cord-279343-ybncwweg 202 14 . . . cord-279343-ybncwweg 203 1 C c NN cord-279343-ybncwweg 203 2 - - HYPH cord-279343-ybncwweg 203 3 type type NN cord-279343-ybncwweg 203 4 lectins lectin NNS cord-279343-ybncwweg 203 5 DC DC NNP cord-279343-ybncwweg 203 6 - - HYPH cord-279343-ybncwweg 203 7 SIGN SIGN NNP cord-279343-ybncwweg 203 8 and and CC cord-279343-ybncwweg 203 9 L l NN cord-279343-ybncwweg 203 10 - - HYPH cord-279343-ybncwweg 203 11 SIGN sign NN cord-279343-ybncwweg 203 12 mediate mediate VB cord-279343-ybncwweg 203 13 cellular cellular JJ cord-279343-ybncwweg 203 14 entry entry NN cord-279343-ybncwweg 203 15 by by IN cord-279343-ybncwweg 203 16 Ebola Ebola NNP cord-279343-ybncwweg 203 17 virus virus NN cord-279343-ybncwweg 203 18 in in IN cord-279343-ybncwweg 203 19 cis cis NNP cord-279343-ybncwweg 203 20 and and CC cord-279343-ybncwweg 203 21 in in IN cord-279343-ybncwweg 203 22 trans trans NNP cord-279343-ybncwweg 203 23 HCV HCV NNP cord-279343-ybncwweg 203 24 and and CC cord-279343-ybncwweg 203 25 HIV HIV NNP cord-279343-ybncwweg 203 26 binding bind VBG cord-279343-ybncwweg 203 27 lectin lectin NN cord-279343-ybncwweg 203 28 , , , cord-279343-ybncwweg 203 29 DC DC NNP cord-279343-ybncwweg 203 30 - - HYPH cord-279343-ybncwweg 203 31 SIGNR SIGNR NNP cord-279343-ybncwweg 203 32 , , , cord-279343-ybncwweg 203 33 is be VBZ cord-279343-ybncwweg 203 34 expressed express VBN cord-279343-ybncwweg 203 35 at at IN cord-279343-ybncwweg 203 36 all all DT cord-279343-ybncwweg 203 37 stages stage NNS cord-279343-ybncwweg 203 38 of of IN cord-279343-ybncwweg 203 39 HCV HCV NNP cord-279343-ybncwweg 203 40 induced induce VBD cord-279343-ybncwweg 203 41 liver liver NN cord-279343-ybncwweg 203 42 disease disease NN cord-279343-ybncwweg 203 43 Sequence sequence NN cord-279343-ybncwweg 203 44 and and CC cord-279343-ybncwweg 203 45 expression expression NN cord-279343-ybncwweg 203 46 of of IN cord-279343-ybncwweg 203 47 a a DT cord-279343-ybncwweg 203 48 membrane membrane NN cord-279343-ybncwweg 203 49 - - HYPH cord-279343-ybncwweg 203 50 associated associate VBN cord-279343-ybncwweg 203 51 C c NN cord-279343-ybncwweg 203 52 - - HYPH cord-279343-ybncwweg 203 53 type type NN cord-279343-ybncwweg 203 54 lectin lectin NN cord-279343-ybncwweg 203 55 that that WDT cord-279343-ybncwweg 203 56 exhibits exhibit VBZ cord-279343-ybncwweg 203 57 CD4-independent cd4-independent NN cord-279343-ybncwweg 203 58 binding bind VBG cord-279343-ybncwweg 203 59 of of IN cord-279343-ybncwweg 203 60 human human JJ cord-279343-ybncwweg 203 61 immunodeficiency immunodeficiency NN cord-279343-ybncwweg 203 62 virus virus NN cord-279343-ybncwweg 203 63 envelope envelope NN cord-279343-ybncwweg 203 64 glycoprotein glycoprotein NN cord-279343-ybncwweg 203 65 gp120 gp120 IN cord-279343-ybncwweg 203 66 CD CD NNP cord-279343-ybncwweg 203 67 209L 209L NNP cord-279343-ybncwweg 203 68 ) ) -RRB- cord-279343-ybncwweg 203 69 is be VBZ cord-279343-ybncwweg 203 70 a a DT cord-279343-ybncwweg 203 71 liver liver NN cord-279343-ybncwweg 203 72 - - HYPH cord-279343-ybncwweg 203 73 specific specific JJ cord-279343-ybncwweg 203 74 capture capture NN cord-279343-ybncwweg 203 75 . . . cord-279343-ybncwweg 204 1 receptor receptor NN cord-279343-ybncwweg 204 2 for for IN cord-279343-ybncwweg 204 3 hepatitis hepatitis NN cord-279343-ybncwweg 204 4 C C NNP cord-279343-ybncwweg 204 5 virus virus NN cord-279343-ybncwweg 204 6 DC DC NNP cord-279343-ybncwweg 204 7 - - HYPH cord-279343-ybncwweg 204 8 SIGN SIGN NNP cord-279343-ybncwweg 204 9 , , , cord-279343-ybncwweg 204 10 a a DT cord-279343-ybncwweg 204 11 dendritic dendritic JJ cord-279343-ybncwweg 204 12 cell cell NN cord-279343-ybncwweg 204 13 - - HYPH cord-279343-ybncwweg 204 14 specific specific JJ cord-279343-ybncwweg 204 15 HIV-1-binding hiv-1-binding NN cord-279343-ybncwweg 204 16 protein protein NN cord-279343-ybncwweg 204 17 that that WDT cord-279343-ybncwweg 204 18 enhances enhance VBZ cord-279343-ybncwweg 204 19 trans trans NN cord-279343-ybncwweg 204 20 - - NN cord-279343-ybncwweg 204 21 infection infection NN cord-279343-ybncwweg 204 22 of of IN cord-279343-ybncwweg 204 23 T t NN cord-279343-ybncwweg 204 24 cells cell NNS cord-279343-ybncwweg 204 25 Human human JJ cord-279343-ybncwweg 204 26 cytomegalovirus cytomegalovirus NN cord-279343-ybncwweg 204 27 binding bind VBG cord-279343-ybncwweg 204 28 to to IN cord-279343-ybncwweg 204 29 DC DC NNP cord-279343-ybncwweg 204 30 - - HYPH cord-279343-ybncwweg 204 31 SIGN SIGN NNP cord-279343-ybncwweg 204 32 is be VBZ cord-279343-ybncwweg 204 33 required require VBN cord-279343-ybncwweg 204 34 for for IN cord-279343-ybncwweg 204 35 dendritic dendritic JJ cord-279343-ybncwweg 204 36 cell cell NN cord-279343-ybncwweg 204 37 infection infection NN cord-279343-ybncwweg 204 38 and and CC cord-279343-ybncwweg 204 39 target target NN cord-279343-ybncwweg 204 40 cell cell NN cord-279343-ybncwweg 204 41 trans trans NN cord-279343-ybncwweg 204 42 - - NN cord-279343-ybncwweg 204 43 infection infection NN cord-279343-ybncwweg 204 44 are be VBP cord-279343-ybncwweg 204 45 high high JJ cord-279343-ybncwweg 204 46 affinity affinity NN cord-279343-ybncwweg 204 47 binding bind VBG cord-279343-ybncwweg 204 48 receptors receptor NNS cord-279343-ybncwweg 204 49 for for IN cord-279343-ybncwweg 204 50 hepatitis hepatitis NN cord-279343-ybncwweg 204 51 C C NNP cord-279343-ybncwweg 204 52 virus virus NN cord-279343-ybncwweg 204 53 glycoprotein glycoprotein NN cord-279343-ybncwweg 204 54 E2 E2 NNP cord-279343-ybncwweg 204 55 C C NNP cord-279343-ybncwweg 204 56 - - HYPH cord-279343-ybncwweg 204 57 type type NN cord-279343-ybncwweg 204 58 Lectins Lectins NNP cord-279343-ybncwweg 204 59 L l NN cord-279343-ybncwweg 204 60 - - HYPH cord-279343-ybncwweg 204 61 SIGN SIGN NNP cord-279343-ybncwweg 204 62 and and CC cord-279343-ybncwweg 204 63 DC DC NNP cord-279343-ybncwweg 204 64 - - HYPH cord-279343-ybncwweg 204 65 SIGN sign NN cord-279343-ybncwweg 204 66 capture capture NN cord-279343-ybncwweg 204 67 and and CC cord-279343-ybncwweg 204 68 transmit transmit VB cord-279343-ybncwweg 204 69 infectious infectious JJ cord-279343-ybncwweg 204 70 hepatitis hepatitis NN cord-279343-ybncwweg 204 71 C c NN cord-279343-ybncwweg 204 72 virus virus NN cord-279343-ybncwweg 204 73 pseudotype pseudotype NN cord-279343-ybncwweg 204 74 particles particle NNS cord-279343-ybncwweg 204 75 Hepatitis Hepatitis NNP cord-279343-ybncwweg 204 76 C C NNP cord-279343-ybncwweg 204 77 virus virus NN cord-279343-ybncwweg 204 78 glycoproteins glycoprotein NNS cord-279343-ybncwweg 204 79 interact interact VBP cord-279343-ybncwweg 204 80 with with IN cord-279343-ybncwweg 204 81 DC DC NNP cord-279343-ybncwweg 204 82 - - HYPH cord-279343-ybncwweg 204 83 SIGN SIGN NNP cord-279343-ybncwweg 204 84 and and CC cord-279343-ybncwweg 204 85 DC DC NNP cord-279343-ybncwweg 204 86 - - HYPH cord-279343-ybncwweg 204 87 SIGNR SIGNR NNP cord-279343-ybncwweg 204 88 DC DC NNP cord-279343-ybncwweg 204 89 - - HYPH cord-279343-ybncwweg 204 90 SIGN SIGN NNP cord-279343-ybncwweg 204 91 and and CC cord-279343-ybncwweg 204 92 DC DC NNP cord-279343-ybncwweg 204 93 - - HYPH cord-279343-ybncwweg 204 94 SIGNR SIGNR NNP cord-279343-ybncwweg 204 95 bind bind VBP cord-279343-ybncwweg 204 96 Ebola Ebola NNP cord-279343-ybncwweg 204 97 glycoproteins glycoprotein NNS cord-279343-ybncwweg 204 98 and and CC cord-279343-ybncwweg 204 99 enhance enhance VB cord-279343-ybncwweg 204 100 infection infection NN cord-279343-ybncwweg 204 101 of of IN cord-279343-ybncwweg 204 102 macrophages macrophage NNS cord-279343-ybncwweg 204 103 and and CC cord-279343-ybncwweg 204 104 endothelial endothelial JJ cord-279343-ybncwweg 204 105 cells cell NNS cord-279343-ybncwweg 204 106 DC DC NNP cord-279343-ybncwweg 204 107 - - HYPH cord-279343-ybncwweg 204 108 SIGN sign NN cord-279343-ybncwweg 204 109 : : : cord-279343-ybncwweg 204 110 escape escape VB cord-279343-ybncwweg 204 111 mechanism mechanism NN cord-279343-ybncwweg 204 112 for for IN cord-279343-ybncwweg 204 113 pathogens pathogen NNS cord-279343-ybncwweg 205 1 DC DC NNP cord-279343-ybncwweg 205 2 - - HYPH cord-279343-ybncwweg 205 3 SIGN sign NN cord-279343-ybncwweg 205 4 : : : cord-279343-ybncwweg 206 1 a a DT cord-279343-ybncwweg 206 2 novel novel JJ cord-279343-ybncwweg 206 3 HIV HIV NNP cord-279343-ybncwweg 206 4 receptor receptor NN cord-279343-ybncwweg 206 5 on on IN cord-279343-ybncwweg 206 6 DCs dc NNS cord-279343-ybncwweg 206 7 that that WDT cord-279343-ybncwweg 206 8 mediates mediate VBZ cord-279343-ybncwweg 206 9 HIV-1 HIV-1 NNP cord-279343-ybncwweg 206 10 transmission transmission NN cord-279343-ybncwweg 206 11 DC DC NNP cord-279343-ybncwweg 206 12 - - HYPH cord-279343-ybncwweg 206 13 SIGN SIGN NNP cord-279343-ybncwweg 206 14 promotes promote VBZ cord-279343-ybncwweg 206 15 exogenous exogenous JJ cord-279343-ybncwweg 206 16 MHC MHC NNP cord-279343-ybncwweg 206 17 - - HYPH cord-279343-ybncwweg 206 18 I I NNP cord-279343-ybncwweg 206 19 - - HYPH cord-279343-ybncwweg 206 20 restricted restrict VBN cord-279343-ybncwweg 206 21 HIV-1 HIV-1 NNP cord-279343-ybncwweg 206 22 antigen antigen NN cord-279343-ybncwweg 206 23 presentation presentation NN cord-279343-ybncwweg 206 24 DC DC NNP cord-279343-ybncwweg 206 25 - - HYPH cord-279343-ybncwweg 206 26 SIGN SIGN NNP cord-279343-ybncwweg 206 27 homologue homologue NN cord-279343-ybncwweg 206 28 expressed express VBN cord-279343-ybncwweg 206 29 in in IN cord-279343-ybncwweg 206 30 endothelial endothelial JJ cord-279343-ybncwweg 206 31 cells cell NNS cord-279343-ybncwweg 206 32 , , , cord-279343-ybncwweg 206 33 binds bind VBZ cord-279343-ybncwweg 206 34 to to IN cord-279343-ybncwweg 206 35 human human JJ cord-279343-ybncwweg 206 36 and and CC cord-279343-ybncwweg 206 37 simian simian JJ cord-279343-ybncwweg 206 38 immunodeficiency immunodeficiency NN cord-279343-ybncwweg 206 39 viruses virus NNS cord-279343-ybncwweg 206 40 and and CC cord-279343-ybncwweg 206 41 activates activate VBZ cord-279343-ybncwweg 206 42 infection infection NN cord-279343-ybncwweg 206 43 in in IN cord-279343-ybncwweg 206 44 trans trans NNP cord-279343-ybncwweg 206 45 DC DC NNP cord-279343-ybncwweg 206 46 - - HYPH cord-279343-ybncwweg 206 47 SIGN SIGN NNP cord-279343-ybncwweg 206 48 ; ; : cord-279343-ybncwweg 206 49 a a DT cord-279343-ybncwweg 206 50 related relate VBN cord-279343-ybncwweg 206 51 gene gene NN cord-279343-ybncwweg 206 52 , , , cord-279343-ybncwweg 206 53 DC DC NNP cord-279343-ybncwweg 206 54 - - HYPH cord-279343-ybncwweg 206 55 SIGNR SIGNR NNP cord-279343-ybncwweg 206 56 ; ; : cord-279343-ybncwweg 206 57 and and CC cord-279343-ybncwweg 206 58 CD23 CD23 NNP cord-279343-ybncwweg 206 59 form form VB cord-279343-ybncwweg 206 60 a a DT cord-279343-ybncwweg 206 61 cluster cluster NN cord-279343-ybncwweg 206 62 on on IN cord-279343-ybncwweg 206 63 19p13 19p13 CD cord-279343-ybncwweg 207 1 A a DT cord-279343-ybncwweg 207 2 dendritic dendritic JJ cord-279343-ybncwweg 207 3 cell cell NN cord-279343-ybncwweg 207 4 - - HYPH cord-279343-ybncwweg 207 5 specific specific JJ cord-279343-ybncwweg 207 6 intercellular intercellular JJ cord-279343-ybncwweg 207 7 adhesion adhesion NN cord-279343-ybncwweg 207 8 molecule molecule NN cord-279343-ybncwweg 207 9 3-grabbing 3-grabbing CD cord-279343-ybncwweg 207 10 nonintegrin nonintegrin NNP cord-279343-ybncwweg 207 11 ( ( -LRB- cord-279343-ybncwweg 207 12 DC DC NNP cord-279343-ybncwweg 207 13 - - HYPH cord-279343-ybncwweg 207 14 SIGN)-related SIGN)-related NNP cord-279343-ybncwweg 207 15 protein protein NN cord-279343-ybncwweg 207 16 is be VBZ cord-279343-ybncwweg 207 17 highly highly RB cord-279343-ybncwweg 207 18 expressed express VBN cord-279343-ybncwweg 207 19 on on IN cord-279343-ybncwweg 207 20 human human JJ cord-279343-ybncwweg 207 21 liver liver NN cord-279343-ybncwweg 207 22 sinusoidal sinusoidal NN cord-279343-ybncwweg 207 23 endothelial endothelial JJ cord-279343-ybncwweg 207 24 cells cell NNS cord-279343-ybncwweg 207 25 and and CC cord-279343-ybncwweg 207 26 promotes promote VBZ cord-279343-ybncwweg 207 27 HIV-1 HIV-1 NNP cord-279343-ybncwweg 207 28 infection infection NN cord-279343-ybncwweg 207 29 A a DT cord-279343-ybncwweg 207 30 novel novel JJ cord-279343-ybncwweg 207 31 mechanism mechanism NN cord-279343-ybncwweg 207 32 of of IN cord-279343-ybncwweg 207 33 carbohydrate carbohydrate NN cord-279343-ybncwweg 207 34 recognition recognition NN cord-279343-ybncwweg 207 35 by by IN cord-279343-ybncwweg 207 36 the the DT cord-279343-ybncwweg 207 37 C c NN cord-279343-ybncwweg 207 38 - - HYPH cord-279343-ybncwweg 207 39 type type NN cord-279343-ybncwweg 207 40 lectins lectin NNS cord-279343-ybncwweg 207 41 DC DC NNP cord-279343-ybncwweg 207 42 - - HYPH cord-279343-ybncwweg 207 43 SIGN SIGN NNP cord-279343-ybncwweg 207 44 and and CC cord-279343-ybncwweg 207 45 DC DC NNP cord-279343-ybncwweg 207 46 - - HYPH cord-279343-ybncwweg 207 47 SIGNR SIGNR NNP cord-279343-ybncwweg 207 48 . . . cord-279343-ybncwweg 208 1 Subunit subunit NN cord-279343-ybncwweg 208 2 organization organization NN cord-279343-ybncwweg 208 3 and and CC cord-279343-ybncwweg 208 4 binding bind VBG cord-279343-ybncwweg 208 5 to to IN cord-279343-ybncwweg 208 6 multivalent multivalent JJ cord-279343-ybncwweg 208 7 ligands ligand NNS cord-279343-ybncwweg 208 8 Structural structural JJ cord-279343-ybncwweg 208 9 basis basis NN cord-279343-ybncwweg 208 10 for for IN cord-279343-ybncwweg 208 11 selective selective JJ cord-279343-ybncwweg 208 12 recognition recognition NN cord-279343-ybncwweg 208 13 of of IN cord-279343-ybncwweg 208 14 oligosaccharides oligosaccharide NNS cord-279343-ybncwweg 208 15 by by IN cord-279343-ybncwweg 208 16 DC DC NNP cord-279343-ybncwweg 208 17 - - HYPH cord-279343-ybncwweg 208 18 SIGN SIGN NNP cord-279343-ybncwweg 208 19 and and CC cord-279343-ybncwweg 208 20 DC DC NNP cord-279343-ybncwweg 208 21 - - HYPH cord-279343-ybncwweg 208 22 SIGNR SIGNR NNP cord-279343-ybncwweg 208 23 Structural structural JJ cord-279343-ybncwweg 208 24 basis basis NN cord-279343-ybncwweg 208 25 for for IN cord-279343-ybncwweg 208 26 distinct distinct JJ cord-279343-ybncwweg 208 27 ligand ligand NN cord-279343-ybncwweg 208 28 - - HYPH cord-279343-ybncwweg 208 29 binding bind VBG cord-279343-ybncwweg 208 30 and and CC cord-279343-ybncwweg 208 31 targeting target VBG cord-279343-ybncwweg 208 32 properties property NNS cord-279343-ybncwweg 208 33 of of IN cord-279343-ybncwweg 208 34 the the DT cord-279343-ybncwweg 208 35 receptors receptor NNS cord-279343-ybncwweg 208 36 DC DC NNP cord-279343-ybncwweg 208 37 - - HYPH cord-279343-ybncwweg 208 38 SIGN SIGN NNP cord-279343-ybncwweg 208 39 and and CC cord-279343-ybncwweg 208 40 DC DC NNP cord-279343-ybncwweg 208 41 - - HYPH cord-279343-ybncwweg 208 42 SIGNR SIGNR NNP cord-279343-ybncwweg 208 43 Contribution Contribution NNP cord-279343-ybncwweg 208 44 to to TO cord-279343-ybncwweg 208 45 ligand ligand NN cord-279343-ybncwweg 208 46 binding binding NN cord-279343-ybncwweg 208 47 by by IN cord-279343-ybncwweg 208 48 multiple multiple JJ cord-279343-ybncwweg 208 49 carbohydrate carbohydrate NN cord-279343-ybncwweg 208 50 - - HYPH cord-279343-ybncwweg 208 51 recognition recognition NN cord-279343-ybncwweg 208 52 domains domain NNS cord-279343-ybncwweg 208 53 in in IN cord-279343-ybncwweg 208 54 the the DT cord-279343-ybncwweg 208 55 macrophage macrophage NN cord-279343-ybncwweg 208 56 mannose mannose NN cord-279343-ybncwweg 208 57 receptor receptor NN cord-279343-ybncwweg 208 58 Characterization characterization NN cord-279343-ybncwweg 208 59 of of IN cord-279343-ybncwweg 208 60 DC DC NNP cord-279343-ybncwweg 208 61 - - HYPH cord-279343-ybncwweg 208 62 SIGN SIGN NNP cord-279343-ybncwweg 208 63 / / SYM cord-279343-ybncwweg 208 64 R r NN cord-279343-ybncwweg 208 65 interaction interaction NN cord-279343-ybncwweg 208 66 with with IN cord-279343-ybncwweg 208 67 HIV-1 HIV-1 NNP cord-279343-ybncwweg 208 68 gp120 gp120 NNP cord-279343-ybncwweg 208 69 and and CC cord-279343-ybncwweg 208 70 ICAM ICAM NNP cord-279343-ybncwweg 208 71 molecules molecule NNS cord-279343-ybncwweg 208 72 favors favor VBZ cord-279343-ybncwweg 208 73 the the DT cord-279343-ybncwweg 208 74 receptor receptor NN cord-279343-ybncwweg 208 75 's 's POS cord-279343-ybncwweg 208 76 role role NN cord-279343-ybncwweg 208 77 as as IN cord-279343-ybncwweg 208 78 an an DT cord-279343-ybncwweg 208 79 antigen antigen NN cord-279343-ybncwweg 208 80 capturing capture VBG cord-279343-ybncwweg 208 81 rather rather RB cord-279343-ybncwweg 208 82 than than IN cord-279343-ybncwweg 208 83 adhesion adhesion NN cord-279343-ybncwweg 208 84 receptor receptor NN cord-279343-ybncwweg 208 85 Extended extend VBN cord-279343-ybncwweg 208 86 neck neck NN cord-279343-ybncwweg 208 87 regions region NNS cord-279343-ybncwweg 208 88 stabilize stabilize VBP cord-279343-ybncwweg 208 89 tetramers tetramer NNS cord-279343-ybncwweg 208 90 of of IN cord-279343-ybncwweg 208 91 the the DT cord-279343-ybncwweg 208 92 receptors receptor NNS cord-279343-ybncwweg 208 93 DC DC NNP cord-279343-ybncwweg 208 94 - - HYPH cord-279343-ybncwweg 208 95 SIGN SIGN NNP cord-279343-ybncwweg 208 96 and and CC cord-279343-ybncwweg 208 97 DC DC NNP cord-279343-ybncwweg 208 98 - - HYPH cord-279343-ybncwweg 208 99 SIGNR SIGNR NNP cord-279343-ybncwweg 208 100 C c NN cord-279343-ybncwweg 208 101 - - HYPH cord-279343-ybncwweg 208 102 type type NN cord-279343-ybncwweg 208 103 lectin lectin NN cord-279343-ybncwweg 208 104 - - HYPH cord-279343-ybncwweg 208 105 like like JJ cord-279343-ybncwweg 208 106 domains domain NNS cord-279343-ybncwweg 208 107 Structure Structure NNP cord-279343-ybncwweg 208 108 of of IN cord-279343-ybncwweg 208 109 a a DT cord-279343-ybncwweg 208 110 C c NN cord-279343-ybncwweg 208 111 - - HYPH cord-279343-ybncwweg 208 112 type type NN cord-279343-ybncwweg 208 113 carbohydrate carbohydrate NN cord-279343-ybncwweg 208 114 recognition recognition NN cord-279343-ybncwweg 208 115 domain domain NN cord-279343-ybncwweg 208 116 from from IN cord-279343-ybncwweg 208 117 the the DT cord-279343-ybncwweg 208 118 macrophage macrophage NN cord-279343-ybncwweg 208 119 mannose mannose NN cord-279343-ybncwweg 208 120 receptor receptor NN cord-279343-ybncwweg 208 121 Collectin Collectin NNP cord-279343-ybncwweg 208 122 structure structure NN cord-279343-ybncwweg 208 123 : : : cord-279343-ybncwweg 208 124 a a DT cord-279343-ybncwweg 208 125 review review NN cord-279343-ybncwweg 209 1 Oligolysinebased oligolysinebased JJ cord-279343-ybncwweg 209 2 oligosaccharide oligosaccharide NN cord-279343-ybncwweg 209 3 clusters cluster NNS cord-279343-ybncwweg 209 4 : : : cord-279343-ybncwweg 209 5 selective selective JJ cord-279343-ybncwweg 209 6 recognition recognition NN cord-279343-ybncwweg 209 7 and and CC cord-279343-ybncwweg 209 8 endocytosis endocytosis NN cord-279343-ybncwweg 209 9 by by IN cord-279343-ybncwweg 209 10 the the DT cord-279343-ybncwweg 209 11 mannose mannose NN cord-279343-ybncwweg 209 12 receptor receptor NN cord-279343-ybncwweg 209 13 and and CC cord-279343-ybncwweg 209 14 dendritic dendritic JJ cord-279343-ybncwweg 209 15 cell cell NN cord-279343-ybncwweg 209 16 - - HYPH cord-279343-ybncwweg 209 17 specific specific JJ cord-279343-ybncwweg 209 18 intercellular intercellular JJ cord-279343-ybncwweg 209 19 adhesion adhesion NN cord-279343-ybncwweg 209 20 molecule molecule NN cord-279343-ybncwweg 209 21 3 3 CD cord-279343-ybncwweg 210 1 ( ( -LRB- cord-279343-ybncwweg 210 2 ICAM-3)-grabbing icam-3)-grabbe VBG cord-279343-ybncwweg 210 3 nonintegrin nonintegrin NNP cord-279343-ybncwweg 210 4 Novel Novel NNP cord-279343-ybncwweg 210 5 member member NN cord-279343-ybncwweg 210 6 of of IN cord-279343-ybncwweg 210 7 the the DT cord-279343-ybncwweg 210 8 CD209 CD209 NNP cord-279343-ybncwweg 210 9 ( ( -LRB- cord-279343-ybncwweg 210 10 DC DC NNP cord-279343-ybncwweg 210 11 - - HYPH cord-279343-ybncwweg 210 12 SIGN SIGN NNP cord-279343-ybncwweg 210 13 ) ) -RRB- cord-279343-ybncwweg 211 1 gene gene NN cord-279343-ybncwweg 211 2 family family NN cord-279343-ybncwweg 211 3 in in IN cord-279343-ybncwweg 211 4 primates primate NNS cord-279343-ybncwweg 212 1 Dendritic dendritic JJ cord-279343-ybncwweg 212 2 - - HYPH cord-279343-ybncwweg 212 3 cell cell NN cord-279343-ybncwweg 212 4 - - HYPH cord-279343-ybncwweg 212 5 specific specific JJ cord-279343-ybncwweg 212 6 ICAM3-grabbing icam3-grabbing FW cord-279343-ybncwweg 212 7 non non JJ cord-279343-ybncwweg 212 8 - - JJ cord-279343-ybncwweg 212 9 integrin integrin JJ cord-279343-ybncwweg 212 10 is be VBZ cord-279343-ybncwweg 212 11 essential essential JJ cord-279343-ybncwweg 212 12 for for IN cord-279343-ybncwweg 212 13 the the DT cord-279343-ybncwweg 212 14 productive productive JJ cord-279343-ybncwweg 212 15 infection infection NN cord-279343-ybncwweg 212 16 of of IN cord-279343-ybncwweg 212 17 human human JJ cord-279343-ybncwweg 212 18 dendritic dendritic JJ cord-279343-ybncwweg 212 19 cells cell NNS cord-279343-ybncwweg 212 20 by by IN cord-279343-ybncwweg 212 21 mosquito mosquito NN cord-279343-ybncwweg 212 22 - - HYPH cord-279343-ybncwweg 212 23 cell cell NN cord-279343-ybncwweg 212 24 - - HYPH cord-279343-ybncwweg 212 25 derived derive VBN cord-279343-ybncwweg 212 26 dengue dengue NN cord-279343-ybncwweg 212 27 viruses virus NNS cord-279343-ybncwweg 212 28 CD209 cd209 VBP cord-279343-ybncwweg 212 29 ) ) -RRB- cord-279343-ybncwweg 212 30 mediates mediate VBZ cord-279343-ybncwweg 212 31 dengue dengue NN cord-279343-ybncwweg 212 32 virus virus NN cord-279343-ybncwweg 212 33 infection infection NN cord-279343-ybncwweg 212 34 of of IN cord-279343-ybncwweg 212 35 human human JJ cord-279343-ybncwweg 212 36 dendritic dendritic JJ cord-279343-ybncwweg 212 37 cells cell NNS cord-279343-ybncwweg 212 38 Variable variable JJ cord-279343-ybncwweg 212 39 surface surface NN cord-279343-ybncwweg 212 40 epitopes epitope NNS cord-279343-ybncwweg 212 41 in in IN cord-279343-ybncwweg 212 42 the the DT cord-279343-ybncwweg 212 43 crystal crystal JJ cord-279343-ybncwweg 212 44 structure structure NN cord-279343-ybncwweg 212 45 of of IN cord-279343-ybncwweg 212 46 dengue dengue NN cord-279343-ybncwweg 212 47 virus virus NN cord-279343-ybncwweg 212 48 type type NN cord-279343-ybncwweg 212 49 3 3 CD cord-279343-ybncwweg 212 50 envelope envelope NN cord-279343-ybncwweg 212 51 glycoprotein glycoprotein VBG cord-279343-ybncwweg 212 52 A a DT cord-279343-ybncwweg 212 53 ligand ligand NN cord-279343-ybncwweg 212 54 - - HYPH cord-279343-ybncwweg 212 55 binding bind VBG cord-279343-ybncwweg 212 56 pocket pocket NN cord-279343-ybncwweg 212 57 in in IN cord-279343-ybncwweg 212 58 the the DT cord-279343-ybncwweg 212 59 dengue dengue NN cord-279343-ybncwweg 212 60 virus virus NN cord-279343-ybncwweg 212 61 envelope envelope NN cord-279343-ybncwweg 212 62 glycoprotein glycoprotein VBG cord-279343-ybncwweg 212 63 Comparative Comparative NNP cord-279343-ybncwweg 212 64 studies study NNS cord-279343-ybncwweg 212 65 of of IN cord-279343-ybncwweg 212 66 protein protein NN cord-279343-ybncwweg 212 67 crystallization crystallization NN cord-279343-ybncwweg 212 68 by by IN cord-279343-ybncwweg 212 69 vapour vapour NN cord-279343-ybncwweg 212 70 - - HYPH cord-279343-ybncwweg 212 71 diffusion diffusion NN cord-279343-ybncwweg 212 72 and and CC cord-279343-ybncwweg 212 73 microbatch microbatch NN cord-279343-ybncwweg 212 74 techniques technique NNS cord-279343-ybncwweg 213 1 The the DT cord-279343-ybncwweg 213 2 role role NN cord-279343-ybncwweg 213 3 of of IN cord-279343-ybncwweg 213 4 oil oil NN cord-279343-ybncwweg 213 5 in in IN cord-279343-ybncwweg 213 6 macromolecular macromolecular JJ cord-279343-ybncwweg 213 7 crystallization crystallization NN cord-279343-ybncwweg 214 1 The the DT cord-279343-ybncwweg 214 2 CCP4 CCP4 NNP cord-279343-ybncwweg 214 3 suite suite NN cord-279343-ybncwweg 214 4 : : : cord-279343-ybncwweg 214 5 programs program NNS cord-279343-ybncwweg 214 6 for for IN cord-279343-ybncwweg 214 7 protein protein NN cord-279343-ybncwweg 214 8 crystallography crystallography NN cord-279343-ybncwweg 214 9 Crystallography Crystallography NNP cord-279343-ybncwweg 214 10 & & CC cord-279343-ybncwweg 214 11 NMR NMR NNP cord-279343-ybncwweg 214 12 system system NN cord-279343-ybncwweg 214 13 : : : cord-279343-ybncwweg 214 14 A a DT cord-279343-ybncwweg 214 15 new new JJ cord-279343-ybncwweg 214 16 software software NN cord-279343-ybncwweg 214 17 suite suite NN cord-279343-ybncwweg 214 18 for for IN cord-279343-ybncwweg 214 19 macromolecular macromolecular JJ cord-279343-ybncwweg 214 20 structure structure NN cord-279343-ybncwweg 214 21 determination determination NN cord-279343-ybncwweg 214 22 PROCHECK PROCHECK NNP cord-279343-ybncwweg 214 23 : : : cord-279343-ybncwweg 214 24 a a DT cord-279343-ybncwweg 214 25 program program NN cord-279343-ybncwweg 214 26 to to TO cord-279343-ybncwweg 214 27 check check VB cord-279343-ybncwweg 214 28 the the DT cord-279343-ybncwweg 214 29 stereochemical stereochemical JJ cord-279343-ybncwweg 214 30 quality quality NN cord-279343-ybncwweg 214 31 of of IN cord-279343-ybncwweg 214 32 protein protein NN cord-279343-ybncwweg 214 33 structures structure NNS cord-279343-ybncwweg 214 34 Not not RB cord-279343-ybncwweg 214 35 your -PRON- PRP$ cord-279343-ybncwweg 214 36 average average JJ cord-279343-ybncwweg 214 37 density density NN cord-279343-ybncwweg 214 38 Basic basic JJ cord-279343-ybncwweg 214 39 local local JJ cord-279343-ybncwweg 214 40 alignment alignment NN cord-279343-ybncwweg 214 41 search search NN cord-279343-ybncwweg 214 42 tool tool NN cord-279343-ybncwweg 214 43 Improved improve VBN cord-279343-ybncwweg 214 44 methods method NNS cord-279343-ybncwweg 214 45 for for IN cord-279343-ybncwweg 214 46 building build VBG cord-279343-ybncwweg 214 47 protein protein NN cord-279343-ybncwweg 214 48 models model NNS cord-279343-ybncwweg 214 49 in in IN cord-279343-ybncwweg 214 50 electron electron NN cord-279343-ybncwweg 214 51 density density NN cord-279343-ybncwweg 214 52 maps map NNS cord-279343-ybncwweg 214 53 and and CC cord-279343-ybncwweg 214 54 the the DT cord-279343-ybncwweg 214 55 location location NN cord-279343-ybncwweg 214 56 of of IN cord-279343-ybncwweg 214 57 errors error NNS cord-279343-ybncwweg 214 58 in in IN cord-279343-ybncwweg 214 59 these these DT cord-279343-ybncwweg 214 60 models model NNS cord-279343-ybncwweg 215 1 MOLSCRIPT MOLSCRIPT NNP cord-279343-ybncwweg 215 2 : : : cord-279343-ybncwweg 215 3 a a DT cord-279343-ybncwweg 215 4 program program NN cord-279343-ybncwweg 215 5 to to TO cord-279343-ybncwweg 215 6 produce produce VB cord-279343-ybncwweg 215 7 both both DT cord-279343-ybncwweg 215 8 detailed detailed JJ cord-279343-ybncwweg 215 9 and and CC cord-279343-ybncwweg 215 10 schematic schematic JJ cord-279343-ybncwweg 215 11 plots plot NNS cord-279343-ybncwweg 215 12 of of IN cord-279343-ybncwweg 215 13 protein protein NN cord-279343-ybncwweg 215 14 structures structure NNS cord-279343-ybncwweg 215 15 On on IN cord-279343-ybncwweg 215 16 the the DT cord-279343-ybncwweg 215 17 nature nature NN cord-279343-ybncwweg 215 18 of of IN cord-279343-ybncwweg 215 19 the the DT cord-279343-ybncwweg 215 20 protein protein NN cord-279343-ybncwweg 215 21 interior interior NN cord-279343-ybncwweg 216 1 We -PRON- PRP cord-279343-ybncwweg 216 2 thank thank VBP cord-279343-ybncwweg 216 3 C. C. NNP cord-279343-ybncwweg 216 4 Hammer Hammer NNP cord-279343-ybncwweg 216 5 for for IN cord-279343-ybncwweg 216 6 mass mass NN cord-279343-ybncwweg 216 7 spectrometry spectrometry NN cord-279343-ybncwweg 216 8 , , , cord-279343-ybncwweg 216 9 M. M. NNP cord-279343-ybncwweg 216 10 Garfield Garfield NNP cord-279343-ybncwweg 216 11 for for IN cord-279343-ybncwweg 216 12 N n CD cord-279343-ybncwweg 216 13 - - HYPH cord-279343-ybncwweg 216 14 terminal terminal NN cord-279343-ybncwweg 216 15 sequencing sequencing NN cord-279343-ybncwweg 216 16 , , , cord-279343-ybncwweg 216 17 B. B. NNP cord-279343-ybncwweg 216 18 Hagos Hagos NNP cord-279343-ybncwweg 216 19 for for IN cord-279343-ybncwweg 216 20 assistance assistance NN cord-279343-ybncwweg 216 21 with with IN cord-279343-ybncwweg 216 22 protein protein NN cord-279343-ybncwweg 216 23 expression expression NN cord-279343-ybncwweg 216 24 , , , cord-279343-ybncwweg 216 25 and and CC cord-279343-ybncwweg 216 26 C. C. NNP cord-279343-ybncwweg 216 27 Foster Foster NNP cord-279343-ybncwweg 216 28 , , , cord-279343-ybncwweg 216 29 A. A. NNP cord-279343-ybncwweg 216 30 Johnson Johnson NNP cord-279343-ybncwweg 216 31 , , , cord-279343-ybncwweg 216 32 Z. Z. NNP cord-279343-ybncwweg 216 33 Lu Lu NNP cord-279343-ybncwweg 216 34 , , , cord-279343-ybncwweg 216 35 S. S. NNP cord-279343-ybncwweg 216 36 Ginell Ginell NNP cord-279343-ybncwweg 216 37 , , , cord-279343-ybncwweg 216 38 and and CC cord-279343-ybncwweg 216 39 N. N. NNP cord-279343-ybncwweg 216 40 Duke Duke NNP cord-279343-ybncwweg 216 41 for for IN cord-279343-ybncwweg 216 42 assistance assistance NN cord-279343-ybncwweg 216 43 with with IN cord-279343-ybncwweg 216 44 synchrotron synchrotron NN cord-279343-ybncwweg 216 45 data data NN cord-279343-ybncwweg 216 46 collection collection NN cord-279343-ybncwweg 216 47 . . . cord-279343-ybncwweg 217 1 We -PRON- PRP cord-279343-ybncwweg 217 2 thank thank VBP cord-279343-ybncwweg 217 3 J. J. NNP cord-279343-ybncwweg 217 4 Arthos Arthos NNP cord-279343-ybncwweg 217 5 for for IN cord-279343-ybncwweg 217 6 helpful helpful JJ cord-279343-ybncwweg 217 7 discussions discussion NNS cord-279343-ybncwweg 217 8 . . . cord-279343-ybncwweg 218 1 We -PRON- PRP cord-279343-ybncwweg 218 2 thank thank VBP cord-279343-ybncwweg 218 3 C. C. NNP cord-279343-ybncwweg 218 4 Foster Foster NNP cord-279343-ybncwweg 218 5 , , , cord-279343-ybncwweg 218 6 S. S. NNP cord-279343-ybncwweg 218 7 Garman Garman NNP cord-279343-ybncwweg 218 8 and and CC cord-279343-ybncwweg 218 9 S. S. NNP cord-279343-ybncwweg 218 10 Radaev Radaev NNP cord-279343-ybncwweg 218 11 for for IN cord-279343-ybncwweg 218 12 helpful helpful JJ cord-279343-ybncwweg 218 13 comments comment NNS cord-279343-ybncwweg 218 14 with with IN cord-279343-ybncwweg 218 15 structure structure NN cord-279343-ybncwweg 218 16 and and CC cord-279343-ybncwweg 218 17 manuscript manuscript NN cord-279343-ybncwweg 218 18 . . . cord-279343-ybncwweg 219 1 Use Use NNP cord-279343-ybncwweg 219 2 of of IN cord-279343-ybncwweg 219 3 the the DT cord-279343-ybncwweg 219 4 Argonne Argonne NNP cord-279343-ybncwweg 219 5 National National NNP cord-279343-ybncwweg 219 6 Laboratory Laboratory NNP cord-279343-ybncwweg 219 7 Structural Structural NNP cord-279343-ybncwweg 219 8 Biology Biology NNP cord-279343-ybncwweg 219 9 Center Center NNP cord-279343-ybncwweg 219 10 beamlines beamline NNS cord-279343-ybncwweg 219 11 at at IN cord-279343-ybncwweg 219 12 the the DT cord-279343-ybncwweg 219 13 Advanced Advanced NNP cord-279343-ybncwweg 219 14 Photon Photon NNP cord-279343-ybncwweg 219 15 Source Source NNP cord-279343-ybncwweg 219 16 was be VBD cord-279343-ybncwweg 219 17 supported support VBN cord-279343-ybncwweg 219 18 by by IN cord-279343-ybncwweg 219 19 the the DT cord-279343-ybncwweg 219 20 US US NNP cord-279343-ybncwweg 219 21 Department Department NNP cord-279343-ybncwweg 219 22 of of IN cord-279343-ybncwweg 219 23 Energy Energy NNP cord-279343-ybncwweg 219 24 , , , cord-279343-ybncwweg 219 25 Office Office NNP cord-279343-ybncwweg 219 26 of of IN cord-279343-ybncwweg 219 27 Energy Energy NNP cord-279343-ybncwweg 219 28 Research Research NNP cord-279343-ybncwweg 219 29 , , , cord-279343-ybncwweg 219 30 under under IN cord-279343-ybncwweg 219 31 Contract Contract NNP cord-279343-ybncwweg 219 32 no no NN cord-279343-ybncwweg 219 33 . . . cord-279343-ybncwweg 219 34 W-31 W-31 NNP cord-279343-ybncwweg 219 35 - - HYPH cord-279343-ybncwweg 219 36 109-ENG-38 109-eng-38 CD cord-279343-ybncwweg 219 37 . . . cord-279343-ybncwweg 220 1 This this DT cord-279343-ybncwweg 220 2 work work NN cord-279343-ybncwweg 220 3 was be VBD cord-279343-ybncwweg 220 4 supported support VBN cord-279343-ybncwweg 220 5 by by IN cord-279343-ybncwweg 220 6 NIAID NIAID NNP cord-279343-ybncwweg 220 7 intramural intramural JJ cord-279343-ybncwweg 220 8 funding funding NN cord-279343-ybncwweg 220 9 . . .