id sid tid token lemma pos 73666397v54 1 1 it it PRON 73666397v54 1 2 has have AUX 73666397v54 1 3 become become VERB 73666397v54 1 4 more more ADV 73666397v54 1 5 evident evident ADJ 73666397v54 1 6 that that SCONJ 73666397v54 1 7 many many ADJ 73666397v54 1 8 proteins protein NOUN 73666397v54 1 9 experience experience VERB 73666397v54 1 10 activity activity NOUN 73666397v54 1 11 regulation regulation NOUN 73666397v54 1 12 via via ADP 73666397v54 1 13 binding bind VERB 73666397v54 1 14 of of ADP 73666397v54 1 15 small small ADJ 73666397v54 1 16 molecules molecule NOUN 73666397v54 1 17 or or CCONJ 73666397v54 1 18 other other ADJ 73666397v54 1 19 proteins protein NOUN 73666397v54 1 20 to to ADP 73666397v54 1 21 sites site NOUN 73666397v54 1 22 that that PRON 73666397v54 1 23 are be AUX 73666397v54 1 24 distal distal ADJ 73666397v54 1 25 from from ADP 73666397v54 1 26 the the DET 73666397v54 1 27 active active ADJ 73666397v54 1 28 site site NOUN 73666397v54 1 29 . . PUNCT 73666397v54 2 1 this this DET 73666397v54 2 2 phenomenon phenomenon NOUN 73666397v54 2 3 , , PUNCT 73666397v54 2 4 commonly commonly ADV 73666397v54 2 5 referred refer VERB 73666397v54 2 6 to to ADP 73666397v54 2 7 as as ADP 73666397v54 2 8 allostery allostery NOUN 73666397v54 2 9 , , PUNCT 73666397v54 2 10 plays play VERB 73666397v54 2 11 an an DET 73666397v54 2 12 important important ADJ 73666397v54 2 13 role role NOUN 73666397v54 2 14 as as ADP 73666397v54 2 15 a a DET 73666397v54 2 16 mechanism mechanism NOUN 73666397v54 2 17 for for ADP 73666397v54 2 18 signal signal NOUN 73666397v54 2 19 transduction transduction NOUN 73666397v54 2 20 within within ADP 73666397v54 2 21 and and CCONJ 73666397v54 2 22 between between ADP 73666397v54 2 23 proteins protein NOUN 73666397v54 2 24 to to PART 73666397v54 2 25 make make VERB 73666397v54 2 26 up up ADP 73666397v54 2 27 the the DET 73666397v54 2 28 complex complex ADJ 73666397v54 2 29 cellular cellular ADJ 73666397v54 2 30 information information NOUN 73666397v54 2 31 networks network NOUN 73666397v54 2 32 . . PUNCT 73666397v54 3 1 proteins protein NOUN 73666397v54 3 2 of of ADP 73666397v54 3 3 modular modular ADJ 73666397v54 3 4 design design NOUN 73666397v54 3 5 represent represent VERB 73666397v54 3 6 a a DET 73666397v54 3 7 unique unique ADJ 73666397v54 3 8 class class NOUN 73666397v54 3 9 of of ADP 73666397v54 3 10 proteins protein NOUN 73666397v54 3 11 that that PRON 73666397v54 3 12 construct construct VERB 73666397v54 3 13 such such ADJ 73666397v54 3 14 information information NOUN 73666397v54 3 15 systems system NOUN 73666397v54 3 16 whereby whereby SCONJ 73666397v54 3 17 a a DET 73666397v54 3 18 docking docking NOUN 73666397v54 3 19 module module NOUN 73666397v54 3 20 and and CCONJ 73666397v54 3 21 a a DET 73666397v54 3 22 loosely loosely ADV 73666397v54 3 23 connected connect VERB 73666397v54 3 24 module module NOUN 73666397v54 3 25 of of ADP 73666397v54 3 26 catalytic catalytic ADJ 73666397v54 3 27 function function NOUN 73666397v54 3 28 operate operate VERB 73666397v54 3 29 in in ADP 73666397v54 3 30 concert concert NOUN 73666397v54 3 31 to to PART 73666397v54 3 32 achieve achieve VERB 73666397v54 3 33 optimal optimal ADJ 73666397v54 3 34 activity activity NOUN 73666397v54 3 35 for for ADP 73666397v54 3 36 the the DET 73666397v54 3 37 viability viability NOUN 73666397v54 3 38 of of ADP 73666397v54 3 39 the the DET 73666397v54 3 40 cell cell NOUN 73666397v54 3 41 . . PUNCT 73666397v54 4 1 in in ADP 73666397v54 4 2 this this DET 73666397v54 4 3 case case NOUN 73666397v54 4 4 , , PUNCT 73666397v54 4 5 inter inter ADJ 73666397v54 4 6 - - NOUN 73666397v54 4 7 domain domain ADJ 73666397v54 4 8 signal signal NOUN 73666397v54 4 9 transduction transduction NOUN 73666397v54 4 10 is be AUX 73666397v54 4 11 carried carry VERB 73666397v54 4 12 out out ADP 73666397v54 4 13 by by ADP 73666397v54 4 14 the the DET 73666397v54 4 15 process process NOUN 73666397v54 4 16 known know VERB 73666397v54 4 17 as as ADP 73666397v54 4 18 modular modular ADJ 73666397v54 4 19 allostery allostery NOUN 73666397v54 4 20 . . PUNCT 73666397v54 5 1 unlike unlike ADP 73666397v54 5 2 the the DET 73666397v54 5 3 classic classic ADJ 73666397v54 5 4 intra intra ADJ 73666397v54 5 5 - - ADJ 73666397v54 5 6 domain domain ADJ 73666397v54 5 7 allosteric allosteric NOUN 73666397v54 5 8 mechanism mechanism NOUN 73666397v54 5 9 , , PUNCT 73666397v54 5 10 modular modular ADJ 73666397v54 5 11 allostery allostery NOUN 73666397v54 5 12 is be AUX 73666397v54 5 13 also also ADV 73666397v54 5 14 associated associate VERB 73666397v54 5 15 with with ADP 73666397v54 5 16 large large ADJ 73666397v54 5 17 inter inter ADJ 73666397v54 5 18 - - ADJ 73666397v54 5 19 domain domain ADJ 73666397v54 5 20 structural structural ADJ 73666397v54 5 21 transitions transition NOUN 73666397v54 5 22 to to PART 73666397v54 5 23 regulate regulate VERB 73666397v54 5 24 activity activity NOUN 73666397v54 5 25 . . PUNCT 73666397v54 6 1 for for ADP 73666397v54 6 2 instance instance NOUN 73666397v54 6 3 , , PUNCT 73666397v54 6 4 ligand ligand VERB 73666397v54 6 5 binding bind VERB 73666397v54 6 6 at at ADP 73666397v54 6 7 one one NUM 73666397v54 6 8 domain domain NOUN 73666397v54 6 9 may may AUX 73666397v54 6 10 control control VERB 73666397v54 6 11 access access NOUN 73666397v54 6 12 of of ADP 73666397v54 6 13 substrate substrate NOUN 73666397v54 6 14 to to ADP 73666397v54 6 15 the the DET 73666397v54 6 16 active active ADJ 73666397v54 6 17 site site NOUN 73666397v54 6 18 of of ADP 73666397v54 6 19 another another DET 73666397v54 6 20 domain domain NOUN 73666397v54 6 21 by by ADP 73666397v54 6 22 directly directly ADV 73666397v54 6 23 blocking block VERB 73666397v54 6 24 the the DET 73666397v54 6 25 active active ADJ 73666397v54 6 26 site site NOUN 73666397v54 6 27 or or CCONJ 73666397v54 6 28 indirectly indirectly ADV 73666397v54 6 29 via via ADP 73666397v54 6 30 a a DET 73666397v54 6 31 distal distal ADJ 73666397v54 6 32 allosteric allosteric NOUN 73666397v54 6 33 site site NOUN 73666397v54 6 34 . . PUNCT 73666397v54 7 1 pin1 pin1 NOUN 73666397v54 7 2 is be AUX 73666397v54 7 3 a a DET 73666397v54 7 4 model model NOUN 73666397v54 7 5 system system NOUN 73666397v54 7 6 of of ADP 73666397v54 7 7 an an DET 73666397v54 7 8 allosteric allosteric ADJ 73666397v54 7 9 protein protein NOUN 73666397v54 7 10 of of ADP 73666397v54 7 11 modular modular ADJ 73666397v54 7 12 design design NOUN 73666397v54 7 13 which which PRON 73666397v54 7 14 consists consist VERB 73666397v54 7 15 of of ADP 73666397v54 7 16 the the DET 73666397v54 7 17 binding bind VERB 73666397v54 7 18 ww ww PROPN 73666397v54 7 19 domain domain NOUN 73666397v54 7 20 that that PRON 73666397v54 7 21 is be AUX 73666397v54 7 22 flexibly flexibly ADV 73666397v54 7 23 tethered tethered ADJ 73666397v54 7 24 to to ADP 73666397v54 7 25 a a DET 73666397v54 7 26 peptidyl peptidyl NOUN 73666397v54 7 27 - - PUNCT 73666397v54 7 28 prolyl prolyl ADJ 73666397v54 7 29 cis cis NOUN 73666397v54 7 30 - - PUNCT 73666397v54 7 31 trans trans NOUN 73666397v54 7 32 isomerase isomerase NOUN 73666397v54 7 33 ( ( PUNCT 73666397v54 7 34 ppiase ppiase NOUN 73666397v54 7 35 ) ) PUNCT 73666397v54 7 36 domain domain NOUN 73666397v54 7 37 . . PUNCT 73666397v54 8 1 pin1 pin1 NOUN 73666397v54 8 2 recognizes recognize NOUN 73666397v54 8 3 and and CCONJ 73666397v54 8 4 catalyses catalyse VERB 73666397v54 8 5 the the DET 73666397v54 8 6 cis cis NOUN 73666397v54 8 7 - - PUNCT 73666397v54 8 8 trans trans NOUN 73666397v54 8 9 conversion conversion NOUN 73666397v54 8 10 of of ADP 73666397v54 8 11 the the DET 73666397v54 8 12 peptidyl peptidyl NOUN 73666397v54 8 13 pser pser NOUN 73666397v54 8 14 / / SYM 73666397v54 8 15 pthr pthr ADJ 73666397v54 8 16 - - PUNCT 73666397v54 8 17 pro pro ADJ 73666397v54 8 18 bond bond NOUN 73666397v54 8 19 of of ADP 73666397v54 8 20 many many ADJ 73666397v54 8 21 targets target NOUN 73666397v54 8 22 . . PUNCT 73666397v54 9 1 variations variation NOUN 73666397v54 9 2 in in ADP 73666397v54 9 3 the the DET 73666397v54 9 4 substrate substrate NOUN 73666397v54 9 5 ' ' PUNCT 73666397v54 9 6 input input NOUN 73666397v54 9 7 ' ' PUNCT 73666397v54 9 8 sequence sequence NOUN 73666397v54 9 9 induces induce VERB 73666397v54 9 10 differential differential ADJ 73666397v54 9 11 processing processing NOUN 73666397v54 9 12 by by ADP 73666397v54 9 13 pin1 pin1 NOUN 73666397v54 9 14 , , PUNCT 73666397v54 9 15 thereby thereby ADV 73666397v54 9 16 modulating modulate VERB 73666397v54 9 17 the the DET 73666397v54 9 18 resultant resultant NOUN 73666397v54 9 19 ' ' PUNCT 73666397v54 9 20 output output NOUN 73666397v54 9 21 ' ' PUNCT 73666397v54 9 22 activities activity NOUN 73666397v54 9 23 for for ADP 73666397v54 9 24 binding bind VERB 73666397v54 9 25 and/or and/or CCONJ 73666397v54 9 26 catalysis catalysis NOUN 73666397v54 9 27 . . PUNCT 73666397v54 10 1 the the DET 73666397v54 10 2 isolated isolated ADJ 73666397v54 10 3 domains domain NOUN 73666397v54 10 4 only only ADV 73666397v54 10 5 hold hold VERB 73666397v54 10 6 part part NOUN 73666397v54 10 7 of of ADP 73666397v54 10 8 the the DET 73666397v54 10 9 full full ADJ 73666397v54 10 10 activity activity NOUN 73666397v54 10 11 that that PRON 73666397v54 10 12 is be AUX 73666397v54 10 13 observed observe VERB 73666397v54 10 14 when when SCONJ 73666397v54 10 15 they they PRON 73666397v54 10 16 are be AUX 73666397v54 10 17 linked link VERB 73666397v54 10 18 . . PUNCT 73666397v54 11 1 although although SCONJ 73666397v54 11 2 the the DET 73666397v54 11 3 ww ww PROPN 73666397v54 11 4 domain domain NOUN 73666397v54 11 5 has have VERB 73666397v54 11 6 no no DET 73666397v54 11 7 catalytic catalytic ADJ 73666397v54 11 8 activity activity NOUN 73666397v54 11 9 , , PUNCT 73666397v54 11 10 its its PRON 73666397v54 11 11 absence absence NOUN 73666397v54 11 12 has have VERB 73666397v54 11 13 deleterious deleterious ADJ 73666397v54 11 14 consequences consequence NOUN 73666397v54 11 15 on on ADP 73666397v54 11 16 the the DET 73666397v54 11 17 catalytic catalytic ADJ 73666397v54 11 18 activity activity NOUN 73666397v54 11 19 of of ADP 73666397v54 11 20 pin1 pin1 NOUN 73666397v54 11 21 . . PUNCT 73666397v54 12 1 in in ADP 73666397v54 12 2 addition addition NOUN 73666397v54 12 3 , , PUNCT 73666397v54 12 4 ligand ligand NOUN 73666397v54 12 5 interaction interaction NOUN 73666397v54 12 6 results result NOUN 73666397v54 12 7 in in ADP 73666397v54 12 8 inter inter ADJ 73666397v54 12 9 - - ADJ 73666397v54 12 10 domain domain ADJ 73666397v54 12 11 coupling coupling NOUN 73666397v54 12 12 . . PUNCT 73666397v54 13 1 therefore therefore ADV 73666397v54 13 2 , , PUNCT 73666397v54 13 3 a a DET 73666397v54 13 4 mode mode NOUN 73666397v54 13 5 of of ADP 73666397v54 13 6 information information NOUN 73666397v54 13 7 transformation transformation NOUN 73666397v54 13 8 exists exist VERB 73666397v54 13 9 that that PRON 73666397v54 13 10 qualifies qualify VERB 73666397v54 13 11 the the DET 73666397v54 13 12 ww ww PROPN 73666397v54 13 13 as as ADP 73666397v54 13 14 an an DET 73666397v54 13 15 allosteric allosteric NOUN 73666397v54 13 16 modulator modulator NOUN 73666397v54 13 17 of of ADP 73666397v54 13 18 the the DET 73666397v54 13 19 activity activity NOUN 73666397v54 13 20 of of ADP 73666397v54 13 21 pin1 pin1 NOUN 73666397v54 13 22 - - PUNCT 73666397v54 13 23 ppiase ppiase NOUN 73666397v54 13 24 . . PUNCT 73666397v54 14 1 the the DET 73666397v54 14 2 underlying underlying ADJ 73666397v54 14 3 molecular molecular ADJ 73666397v54 14 4 processes process NOUN 73666397v54 14 5 for for ADP 73666397v54 14 6 site site NOUN 73666397v54 14 7 to to PART 73666397v54 14 8 site site VERB 73666397v54 14 9 communication communication NOUN 73666397v54 14 10 in in ADP 73666397v54 14 11 proteins protein NOUN 73666397v54 14 12 are be AUX 73666397v54 14 13 thought think VERB 73666397v54 14 14 to to PART 73666397v54 14 15 involve involve VERB 73666397v54 14 16 conformational conformational ADJ 73666397v54 14 17 transitions transition NOUN 73666397v54 14 18 that that PRON 73666397v54 14 19 are be AUX 73666397v54 14 20 propagated propagate VERB 73666397v54 14 21 between between ADP 73666397v54 14 22 the the DET 73666397v54 14 23 active active ADJ 73666397v54 14 24 site site NOUN 73666397v54 14 25 and and CCONJ 73666397v54 14 26 the the DET 73666397v54 14 27 allosteric allosteric NOUN 73666397v54 14 28 site site NOUN 73666397v54 14 29 . . PUNCT 73666397v54 15 1 the the DET 73666397v54 15 2 time time NOUN 73666397v54 15 3 scales scale NOUN 73666397v54 15 4 for for ADP 73666397v54 15 5 such such ADJ 73666397v54 15 6 motions motion NOUN 73666397v54 15 7 can can AUX 73666397v54 15 8 be be AUX 73666397v54 15 9 in in ADP 73666397v54 15 10 the the DET 73666397v54 15 11 order order NOUN 73666397v54 15 12 of of ADP 73666397v54 15 13 slow slow ADJ 73666397v54 15 14 ( ( PUNCT 73666397v54 15 15 ì_å_s ì_å_s PROPN 73666397v54 15 16 - - PUNCT 73666397v54 15 17 ms ms PROPN 73666397v54 15 18 ) ) PUNCT 73666397v54 15 19 displacements displacement NOUN 73666397v54 15 20 to to PART 73666397v54 15 21 fast fast VERB 73666397v54 15 22 ( ( PUNCT 73666397v54 15 23 ps ps NOUN 73666397v54 15 24 - - PUNCT 73666397v54 15 25 ns ns NOUN 73666397v54 15 26 ) ) PUNCT 73666397v54 15 27 fluctuating fluctuate VERB 73666397v54 15 28 motions motion NOUN 73666397v54 15 29 . . PUNCT 73666397v54 16 1 nuclear nuclear ADJ 73666397v54 16 2 magnetic magnetic ADJ 73666397v54 16 3 resonance resonance NOUN 73666397v54 16 4 ( ( PUNCT 73666397v54 16 5 nmr nmr NOUN 73666397v54 16 6 ) ) PUNCT 73666397v54 16 7 is be AUX 73666397v54 16 8 a a DET 73666397v54 16 9 versatile versatile ADJ 73666397v54 16 10 non non ADJ 73666397v54 16 11 - - ADJ 73666397v54 16 12 invasive invasive ADJ 73666397v54 16 13 technique technique NOUN 73666397v54 16 14 that that PRON 73666397v54 16 15 probes probe VERB 73666397v54 16 16 such such ADJ 73666397v54 16 17 molecular molecular ADJ 73666397v54 16 18 dynamics dynamic NOUN 73666397v54 16 19 in in ADP 73666397v54 16 20 solution solution NOUN 73666397v54 16 21 and and CCONJ 73666397v54 16 22 at at ADP 73666397v54 16 23 multiple multiple ADJ 73666397v54 16 24 sites site NOUN 73666397v54 16 25 . . PUNCT 73666397v54 17 1 this this DET 73666397v54 17 2 dissertation dissertation NOUN 73666397v54 17 3 reports report VERB 73666397v54 17 4 the the DET 73666397v54 17 5 research research NOUN 73666397v54 17 6 on on ADP 73666397v54 17 7 the the DET 73666397v54 17 8 discovery discovery NOUN 73666397v54 17 9 of of ADP 73666397v54 17 10 a a DET 73666397v54 17 11 novel novel ADJ 73666397v54 17 12 internal internal ADJ 73666397v54 17 13 dynamic dynamic ADJ 73666397v54 17 14 conduit conduit NOUN 73666397v54 17 15 of of ADP 73666397v54 17 16 modular modular ADJ 73666397v54 17 17 allosteric allosteric NOUN 73666397v54 17 18 communication communication NOUN 73666397v54 17 19 between between ADP 73666397v54 17 20 the the DET 73666397v54 17 21 catalytic catalytic ADJ 73666397v54 17 22 site site NOUN 73666397v54 17 23 of of ADP 73666397v54 17 24 pin1 pin1 NOUN 73666397v54 17 25 - - PUNCT 73666397v54 17 26 ppiase ppiase NOUN 73666397v54 17 27 and and CCONJ 73666397v54 17 28 the the DET 73666397v54 17 29 allosteric allosteric NOUN 73666397v54 17 30 ww ww PROPN 73666397v54 17 31 interaction interaction NOUN 73666397v54 17 32 site site NOUN 73666397v54 17 33 located locate VERB 73666397v54 17 34 about about ADV 73666397v54 17 35 12 12 NUM 73666397v54 17 36 angstroms angstrom NOUN 73666397v54 17 37 away away ADV 73666397v54 17 38 . . PUNCT 73666397v54 18 1 in in ADP 73666397v54 18 2 particular particular ADJ 73666397v54 18 3 , , PUNCT 73666397v54 18 4 deuterium deuterium NOUN 73666397v54 18 5 ( ( PUNCT 73666397v54 18 6 2d 2d NOUN 73666397v54 18 7 ) ) PUNCT 73666397v54 18 8 nmr nmr NOUN 73666397v54 18 9 relaxation relaxation NOUN 73666397v54 18 10 experiments experiment NOUN 73666397v54 18 11 were be AUX 73666397v54 18 12 used use VERB 73666397v54 18 13 to to PART 73666397v54 18 14 probe probe VERB 73666397v54 18 15 the the DET 73666397v54 18 16 internal internal ADJ 73666397v54 18 17 flexibility flexibility NOUN 73666397v54 18 18 of of ADP 73666397v54 18 19 methyl methyl NOUN 73666397v54 18 20 side side NOUN 73666397v54 18 21 chains chain NOUN 73666397v54 18 22 of of ADP 73666397v54 18 23 pin1 pin1 NOUN 73666397v54 18 24 - - PUNCT 73666397v54 18 25 ppiase ppiase NOUN 73666397v54 18 26 upon upon SCONJ 73666397v54 18 27 ligand ligand NOUN 73666397v54 18 28 interaction interaction NOUN 73666397v54 18 29 . . PUNCT 73666397v54 19 1 ligands ligand NOUN 73666397v54 19 2 of of ADP 73666397v54 19 3 different different ADJ 73666397v54 19 4 chemical chemical ADJ 73666397v54 19 5 compositions composition NOUN 73666397v54 19 6 , , PUNCT 73666397v54 19 7 configurations configuration NOUN 73666397v54 19 8 and and CCONJ 73666397v54 19 9 flexibilities flexibility NOUN 73666397v54 19 10 induced induce VERB 73666397v54 19 11 varying vary VERB 73666397v54 19 12 rigidification rigidification NOUN 73666397v54 19 13 magnitudes magnitude NOUN 73666397v54 19 14 of of ADP 73666397v54 19 15 pin1 pin1 NOUN 73666397v54 19 16 's 's PART 73666397v54 19 17 internal internal ADJ 73666397v54 19 18 fast fast NOUN 73666397v54 19 19 ( ( PUNCT 73666397v54 19 20 ps ps NOUN 73666397v54 19 21 - - PUNCT 73666397v54 19 22 ns ns NOUN 73666397v54 19 23 ) ) PUNCT 73666397v54 19 24 fluctuating fluctuate VERB 73666397v54 19 25 motions motion NOUN 73666397v54 19 26 . . PUNCT 73666397v54 20 1 the the DET 73666397v54 20 2 greatest great ADJ 73666397v54 20 3 flexibility flexibility NOUN 73666397v54 20 4 loss loss NOUN 73666397v54 20 5 was be AUX 73666397v54 20 6 observed observe VERB 73666397v54 20 7 for for ADP 73666397v54 20 8 ligands ligand NOUN 73666397v54 20 9 with with ADP 73666397v54 20 10 high high ADJ 73666397v54 20 11 binding binding ADJ 73666397v54 20 12 affinities affinity NOUN 73666397v54 20 13 . . PUNCT 73666397v54 21 1 because because SCONJ 73666397v54 21 2 the the DET 73666397v54 21 3 locked lock VERB 73666397v54 21 4 - - PUNCT 73666397v54 21 5 cis cis NOUN 73666397v54 21 6 ground ground NOUN 73666397v54 21 7 state state NOUN 73666397v54 21 8 analog analog NOUN 73666397v54 21 9 of of ADP 73666397v54 21 10 substrate substrate NOUN 73666397v54 21 11 showed show VERB 73666397v54 21 12 a a DET 73666397v54 21 13 greater great ADJ 73666397v54 21 14 response response NOUN 73666397v54 21 15 than than ADP 73666397v54 21 16 the the DET 73666397v54 21 17 trans trans PROPN 73666397v54 21 18 counterpart counterpart NOUN 73666397v54 21 19 , , PUNCT 73666397v54 21 20 the the DET 73666397v54 21 21 dynamic dynamic ADJ 73666397v54 21 22 conduit conduit NOUN 73666397v54 21 23 observed observe VERB 73666397v54 21 24 with with ADP 73666397v54 21 25 peptide peptide NOUN 73666397v54 21 26 substrate substrate NOUN 73666397v54 21 27 must must AUX 73666397v54 21 28 coordinate coordinate VERB 73666397v54 21 29 the the DET 73666397v54 21 30 interaction interaction NOUN 73666397v54 21 31 of of ADP 73666397v54 21 32 cis cis NOUN 73666397v54 21 33 - - PUNCT 73666397v54 21 34 like like ADJ 73666397v54 21 35 substrate substrate NOUN 73666397v54 21 36 conformers conformer VERB 73666397v54 21 37 . . PUNCT 73666397v54 22 1 although although SCONJ 73666397v54 22 2 the the DET 73666397v54 22 3 cis cis NOUN 73666397v54 22 4 - - PUNCT 73666397v54 22 5 locked lock VERB 73666397v54 22 6 isostere isostere NOUN 73666397v54 22 7 does do AUX 73666397v54 22 8 not not PART 73666397v54 22 9 bind bind VERB 73666397v54 22 10 pin1 pin1 NOUN 73666397v54 22 11 - - PUNCT 73666397v54 22 12 ww ww PROPN 73666397v54 22 13 , , PUNCT 73666397v54 22 14 it it PRON 73666397v54 22 15 caused cause VERB 73666397v54 22 16 a a DET 73666397v54 22 17 much much ADV 73666397v54 22 18 weaker weak ADJ 73666397v54 22 19 response response NOUN 73666397v54 22 20 in in ADP 73666397v54 22 21 the the DET 73666397v54 22 22 internal internal ADJ 73666397v54 22 23 conduit conduit NOUN 73666397v54 22 24 for for ADP 73666397v54 22 25 the the DET 73666397v54 22 26 isolated isolated ADJ 73666397v54 22 27 ppiase ppiase NOUN 73666397v54 22 28 domain domain NOUN 73666397v54 22 29 and and CCONJ 73666397v54 22 30 bound bind VERB 73666397v54 22 31 weakly weakly ADJ 73666397v54 22 32 than than ADP 73666397v54 22 33 pin1 pin1 NOUN 73666397v54 22 34 - - PUNCT 73666397v54 22 35 ppiase ppiase NOUN 73666397v54 22 36 . . PUNCT 73666397v54 23 1 this this PRON 73666397v54 23 2 suggests suggest VERB 73666397v54 23 3 that that SCONJ 73666397v54 23 4 the the DET 73666397v54 23 5 dynamic dynamic ADJ 73666397v54 23 6 conduit conduit NOUN 73666397v54 23 7 links link NOUN 73666397v54 23 8 ligand ligand VERB 73666397v54 23 9 binding bind VERB 73666397v54 23 10 activity activity NOUN 73666397v54 23 11 at at ADP 73666397v54 23 12 the the DET 73666397v54 23 13 ppiase ppiase NOUN 73666397v54 23 14 active active ADJ 73666397v54 23 15 site site NOUN 73666397v54 23 16 and and CCONJ 73666397v54 23 17 the the DET 73666397v54 23 18 interaction interaction NOUN 73666397v54 23 19 of of ADP 73666397v54 23 20 the the DET 73666397v54 23 21 ww ww PROPN 73666397v54 23 22 domain domain NOUN 73666397v54 23 23 at at ADP 73666397v54 23 24 the the DET 73666397v54 23 25 domain domain NOUN 73666397v54 23 26 interface interface NOUN 73666397v54 23 27 on on ADP 73666397v54 23 28 pin1 pin1 NOUN 73666397v54 23 29 - - PUNCT 73666397v54 23 30 ppiase ppiase NOUN 73666397v54 23 31 . . PUNCT 73666397v54 24 1 in in ADP 73666397v54 24 2 addition addition NOUN 73666397v54 24 3 to to ADP 73666397v54 24 4 probing probe VERB 73666397v54 24 5 the the DET 73666397v54 24 6 dynamics dynamic NOUN 73666397v54 24 7 - - PUNCT 73666397v54 24 8 function function NOUN 73666397v54 24 9 relationships relationship NOUN 73666397v54 24 10 of of ADP 73666397v54 24 11 pin1 pin1 NOUN 73666397v54 24 12 , , PUNCT 73666397v54 24 13 natural natural ADJ 73666397v54 24 14 abundance abundance NOUN 73666397v54 24 15 carbon carbon NOUN 73666397v54 24 16 ( ( PUNCT 73666397v54 24 17 13cì_å± 13cì_å± NUM 73666397v54 24 18 ) ) PUNCT 73666397v54 24 19 nmr nmr NOUN 73666397v54 24 20 relaxation relaxation NOUN 73666397v54 24 21 dispersion dispersion NOUN 73666397v54 24 22 experiments experiment NOUN 73666397v54 24 23 were be AUX 73666397v54 24 24 used use VERB 73666397v54 24 25 to to PART 73666397v54 24 26 probe probe VERB 73666397v54 24 27 the the DET 73666397v54 24 28 dynamics dynamic NOUN 73666397v54 24 29 of of ADP 73666397v54 24 30 the the DET 73666397v54 24 31 backbone backbone NOUN 73666397v54 24 32 dihedrals dihedral NOUN 73666397v54 24 33 of of ADP 73666397v54 24 34 a a DET 73666397v54 24 35 pin1 pin1 NOUN 73666397v54 24 36 ligand ligand NOUN 73666397v54 24 37 system system NOUN 73666397v54 24 38 comprised comprise VERB 73666397v54 24 39 of of ADP 73666397v54 24 40 a a DET 73666397v54 24 41 peptide peptide NOUN 73666397v54 24 42 substrate substrate NOUN 73666397v54 24 43 and and CCONJ 73666397v54 24 44 its its PRON 73666397v54 24 45 representative representative ADJ 73666397v54 24 46 ground ground NOUN 73666397v54 24 47 state state NOUN 73666397v54 24 48 cis cis PROPN 73666397v54 24 49 and and CCONJ 73666397v54 24 50 trans trans X 73666397v54 24 51 locked lock VERB 73666397v54 24 52 analogues analogue NOUN 73666397v54 24 53 . . PUNCT 73666397v54 25 1 from from ADP 73666397v54 25 2 this this PRON 73666397v54 25 3 , , PUNCT 73666397v54 25 4 newer new ADJ 73666397v54 25 5 findings finding NOUN 73666397v54 25 6 on on ADP 73666397v54 25 7 the the DET 73666397v54 25 8 site site NOUN 73666397v54 25 9 - - PUNCT 73666397v54 25 10 specific specific ADJ 73666397v54 25 11 kinetics kinetic NOUN 73666397v54 25 12 and and CCONJ 73666397v54 25 13 thermodynamics thermodynamic NOUN 73666397v54 25 14 of of ADP 73666397v54 25 15 the the DET 73666397v54 25 16 ppiase ppiase NOUN 73666397v54 25 17 rotomerization rotomerization NOUN 73666397v54 25 18 mechanism mechanism NOUN 73666397v54 25 19 are be AUX 73666397v54 25 20 hereby hereby ADV 73666397v54 25 21 reported report VERB 73666397v54 25 22 . . PUNCT 73666397v54 26 1 in in ADP 73666397v54 26 2 particular particular ADJ 73666397v54 26 3 , , PUNCT 73666397v54 26 4 the the DET 73666397v54 26 5 cis cis NOUN 73666397v54 26 6 conformer conformer NOUN 73666397v54 26 7 is be AUX 73666397v54 26 8 more more ADV 73666397v54 26 9 conformationally conformationally ADV 73666397v54 26 10 restricted restrict VERB 73666397v54 26 11 and and CCONJ 73666397v54 26 12 primed prime VERB 73666397v54 26 13 for for ADP 73666397v54 26 14 docking docking NOUN 73666397v54 26 15 ppiase ppiase NOUN 73666397v54 26 16 than than SCONJ 73666397v54 26 17 the the DET 73666397v54 26 18 trans trans PROPN 73666397v54 26 19 counterpart counterpart NOUN 73666397v54 26 20 which which PRON 73666397v54 26 21 experiences experience VERB 73666397v54 26 22 pre pre NOUN 73666397v54 26 23 - - NOUN 73666397v54 26 24 organization organization NOUN 73666397v54 26 25 at at ADP 73666397v54 26 26 the the DET 73666397v54 26 27 terminal terminal NOUN 73666397v54 26 28 ends end VERB 73666397v54 26 29 upon upon SCONJ 73666397v54 26 30 binding bind VERB 73666397v54 26 31 ppiase ppiase NOUN 73666397v54 26 32 . . PUNCT 73666397v54 27 1 substrate substrate NOUN 73666397v54 27 2 isomerization isomerization NOUN 73666397v54 27 3 proceeds proceed VERB 73666397v54 27 4 with with ADP 73666397v54 27 5 anchoring anchoring NOUN 73666397v54 27 6 of of ADP 73666397v54 27 7 residues residue NOUN 73666397v54 27 8 located locate VERB 73666397v54 27 9 at at ADP 73666397v54 27 10 the the DET 73666397v54 27 11 n n NOUN 73666397v54 27 12 - - NOUN 73666397v54 27 13 terminal terminal NOUN 73666397v54 27 14 of of ADP 73666397v54 27 15 the the DET 73666397v54 27 16 peptidyl peptidyl NOUN 73666397v54 27 17 - - PUNCT 73666397v54 27 18 prolyl prolyl ADJ 73666397v54 27 19 bond bond NOUN 73666397v54 27 20 and and CCONJ 73666397v54 27 21 rotation rotation NOUN 73666397v54 27 22 at at ADP 73666397v54 27 23 the the DET 73666397v54 27 24 c c NOUN 73666397v54 27 25 - - PUNCT 73666397v54 27 26 terminal terminal ADJ 73666397v54 27 27 end end NOUN 73666397v54 27 28 with with ADP 73666397v54 27 29 activation activation NOUN 73666397v54 27 30 free free ADJ 73666397v54 27 31 energies energy NOUN 73666397v54 27 32 for for ADP 73666397v54 27 33 cis cis NOUN 73666397v54 27 34 - - PUNCT 73666397v54 27 35 trans trans NOUN 73666397v54 27 36 conversion conversion NOUN 73666397v54 27 37 of of ADP 73666397v54 27 38 ì ì PROPN 73666397v54 27 39 _ _ PROPN 73666397v54 27 40 ' ' PUNCT 73666397v54 27 41 gì¢ gì¢ PROPN 73666397v54 27 42 ââåêct ââåêct VERB 73666397v54 27 43 13.3 13.3 NUM 73666397v54 27 44 kcal kcal PROPN 73666397v54 27 45 / / SYM 73666397v54 27 46 mol mol PROPN 73666397v54 27 47 and and CCONJ 73666397v54 27 48 ì ì PROPN 73666397v54 27 49 _ _ PUNCT 73666397v54 27 50 ' ' PUNCT 73666397v54 27 51 gì¢ gì¢ PROPN 73666397v54 28 1 ââåêtc ââåêtc VERB 73666397v54 28 2 15.4 15.4 NUM 73666397v54 28 3 kcal kcal PROPN 73666397v54 28 4 / / SYM 73666397v54 28 5 mol mol PROPN 73666397v54 28 6 . . PUNCT