id	sid	tid	token	lemma	pos
tq57np21r75	1	1	networks	network	NOUN
tq57np21r75	1	2	are	be	AUX
tq57np21r75	1	3	used	use	VERB
tq57np21r75	1	4	to	to	PART
tq57np21r75	1	5	model	model	VERB
tq57np21r75	1	6	a	a	DET
tq57np21r75	1	7	wide	wide	ADJ
tq57np21r75	1	8	variety	variety	NOUN
tq57np21r75	1	9	of	of	ADP
tq57np21r75	1	10	real	real	ADJ
tq57np21r75	1	11	-	-	PUNCT
tq57np21r75	1	12	world	world	NOUN
tq57np21r75	1	13	systems	system	NOUN
tq57np21r75	1	14	.	.	PUNCT
tq57np21r75	2	1	network	network	NOUN
tq57np21r75	2	2	alignment	alignment	NOUN
tq57np21r75	2	3	(	(	PUNCT
tq57np21r75	2	4	na	na	AUX
tq57np21r75	2	5	)	)	PUNCT
tq57np21r75	2	6	aims	aim	VERB
tq57np21r75	2	7	to	to	PART
tq57np21r75	2	8	find	find	VERB
tq57np21r75	2	9	a	a	DET
tq57np21r75	2	10	node	node	NOUN
tq57np21r75	2	11	mapping	mapping	NOUN
tq57np21r75	2	12	between	between	ADP
tq57np21r75	2	13	networks	network	NOUN
tq57np21r75	2	14	that	that	PRON
tq57np21r75	2	15	identifies	identify	VERB
tq57np21r75	2	16	topologically	topologically	ADV
tq57np21r75	2	17	or	or	CCONJ
tq57np21r75	2	18	functionally	functionally	ADV
tq57np21r75	2	19	similar	similar	ADJ
tq57np21r75	2	20	network	network	NOUN
tq57np21r75	2	21	regions	region	NOUN
tq57np21r75	2	22	.	.	PUNCT
tq57np21r75	3	1	na	na	PART
tq57np21r75	3	2	has	have	VERB
tq57np21r75	3	3	applications	application	NOUN
tq57np21r75	3	4	in	in	ADP
tq57np21r75	3	5	many	many	ADJ
tq57np21r75	3	6	fields	field	NOUN
tq57np21r75	3	7	,	,	PUNCT
tq57np21r75	3	8	including	include	VERB
tq57np21r75	3	9	computational	computational	ADJ
tq57np21r75	3	10	biology	biology	NOUN
tq57np21r75	3	11	,	,	PUNCT
tq57np21r75	3	12	ontology	ontology	NOUN
tq57np21r75	3	13	matching	matching	NOUN
tq57np21r75	3	14	,	,	PUNCT
tq57np21r75	3	15	language	language	NOUN
tq57np21r75	3	16	processing	processing	NOUN
tq57np21r75	3	17	,	,	PUNCT
tq57np21r75	3	18	and	and	CCONJ
tq57np21r75	3	19	social	social	ADJ
tq57np21r75	3	20	networks	network	NOUN
tq57np21r75	3	21	.	.	PUNCT
tq57np21r75	4	1	the	the	DET
tq57np21r75	4	2	focus	focus	NOUN
tq57np21r75	4	3	of	of	ADP
tq57np21r75	4	4	this	this	DET
tq57np21r75	4	5	dissertation	dissertation	NOUN
tq57np21r75	4	6	is	be	AUX
tq57np21r75	4	7	on	on	ADP
tq57np21r75	4	8	na	na	ADP
tq57np21r75	4	9	in	in	ADP
tq57np21r75	4	10	the	the	DET
tq57np21r75	4	11	domain	domain	NOUN
tq57np21r75	4	12	of	of	ADP
tq57np21r75	4	13	computational	computational	ADJ
tq57np21r75	4	14	biology	biology	NOUN
tq57np21r75	4	15	,	,	PUNCT
tq57np21r75	4	16	where	where	SCONJ
tq57np21r75	4	17	na	na	PRON
tq57np21r75	4	18	is	be	AUX
tq57np21r75	4	19	used	use	VERB
tq57np21r75	4	20	to	to	PART
tq57np21r75	4	21	align	align	VERB
tq57np21r75	4	22	biological	biological	ADJ
tq57np21r75	4	23	networks	network	NOUN
tq57np21r75	4	24	of	of	ADP
tq57np21r75	4	25	different	different	ADJ
tq57np21r75	4	26	species	specie	NOUN
tq57np21r75	4	27	,	,	PUNCT
tq57np21r75	4	28	such	such	ADJ
tq57np21r75	4	29	as	as	ADP
tq57np21r75	4	30	the	the	DET
tq57np21r75	4	31	species	specie	NOUN
tq57np21r75	4	32	'	'	PART
tq57np21r75	4	33	protein	protein	NOUN
tq57np21r75	4	34	interaction	interaction	NOUN
tq57np21r75	4	35	networks	network	NOUN
tq57np21r75	4	36	(	(	PUNCT
tq57np21r75	4	37	pins	pin	NOUN
tq57np21r75	4	38	)	)	PUNCT
tq57np21r75	4	39	.	.	PUNCT
tq57np21r75	5	1	then	then	ADV
tq57np21r75	5	2	,	,	PUNCT
tq57np21r75	5	3	na	na	PART
tq57np21r75	5	4	can	can	AUX
tq57np21r75	5	5	guide	guide	VERB
tq57np21r75	5	6	the	the	DET
tq57np21r75	5	7	transfer	transfer	NOUN
tq57np21r75	5	8	of	of	ADP
tq57np21r75	5	9	biological	biological	ADJ
tq57np21r75	5	10	knowledge	knowledge	NOUN
tq57np21r75	5	11	from	from	ADP
tq57np21r75	5	12	well	well	ADV
tq57np21r75	5	13	-	-	PUNCT
tq57np21r75	5	14	studied	study	VERB
tq57np21r75	5	15	species	specie	NOUN
tq57np21r75	5	16	to	to	ADP
tq57np21r75	5	17	poorly	poorly	ADV
tq57np21r75	5	18	-	-	PUNCT
tq57np21r75	5	19	studied	study	VERB
tq57np21r75	5	20	species	specie	NOUN
tq57np21r75	5	21	between	between	ADP
tq57np21r75	5	22	conserved	conserved	PROPN
tq57np21r75	5	23	(	(	PUNCT
tq57np21r75	5	24	i.e.	i.e.	X
tq57np21r75	5	25	,	,	PUNCT
tq57np21r75	5	26	aligned	align	VERB
tq57np21r75	5	27	)	)	PUNCT
tq57np21r75	5	28	pin	pin	NOUN
tq57np21r75	5	29	regions	region	NOUN
tq57np21r75	5	30	.	.	PUNCT
tq57np21r75	6	1	as	as	ADP
tq57np21r75	6	2	such	such	ADJ
tq57np21r75	6	3	,	,	PUNCT
tq57np21r75	6	4	na	na	PART
tq57np21r75	6	5	has	have	VERB
tq57np21r75	6	6	the	the	DET
tq57np21r75	6	7	potential	potential	NOUN
tq57np21r75	6	8	to	to	PART
tq57np21r75	6	9	revolutionize	revolutionize	VERB
tq57np21r75	6	10	our	our	PRON
tq57np21r75	6	11	biological	biological	ADJ
tq57np21r75	6	12	understanding	understanding	NOUN
tq57np21r75	6	13	,	,	PUNCT
tq57np21r75	6	14	just	just	ADV
tq57np21r75	6	15	as	as	SCONJ
tq57np21r75	6	16	genomic	genomic	ADJ
tq57np21r75	6	17	sequence	sequence	NOUN
tq57np21r75	6	18	alignment	alignment	NOUN
tq57np21r75	6	19	has	have	AUX
tq57np21r75	6	20	had.na	had.na	VERB
tq57np21r75	6	21	can	can	AUX
tq57np21r75	6	22	be	be	AUX
tq57np21r75	6	23	categorized	categorize	VERB
tq57np21r75	6	24	into	into	ADP
tq57np21r75	6	25	pairwise	pairwise	NOUN
tq57np21r75	6	26	and	and	CCONJ
tq57np21r75	6	27	multiple	multiple	ADJ
tq57np21r75	6	28	.	.	PUNCT
tq57np21r75	7	1	pairwise	pairwise	NOUN
tq57np21r75	7	2	na	na	ADP
tq57np21r75	7	3	(	(	PUNCT
tq57np21r75	7	4	pna	pna	PROPN
tq57np21r75	7	5	)	)	PUNCT
tq57np21r75	7	6	aims	aim	VERB
tq57np21r75	7	7	to	to	PART
tq57np21r75	7	8	align	align	VERB
tq57np21r75	7	9	two	two	NUM
tq57np21r75	7	10	networks	network	NOUN
tq57np21r75	7	11	while	while	SCONJ
tq57np21r75	7	12	multiple	multiple	ADJ
tq57np21r75	7	13	na	na	X
tq57np21r75	7	14	(	(	PUNCT
tq57np21r75	7	15	mna	mna	PROPN
tq57np21r75	7	16	)	)	PUNCT
tq57np21r75	7	17	can	can	AUX
tq57np21r75	7	18	align	align	VERB
tq57np21r75	7	19	more	more	ADJ
tq57np21r75	7	20	than	than	ADP
tq57np21r75	7	21	two	two	NUM
tq57np21r75	7	22	networks	network	NOUN
tq57np21r75	7	23	.	.	PUNCT
tq57np21r75	8	1	it	it	PRON
tq57np21r75	8	2	is	be	AUX
tq57np21r75	8	3	hypothesized	hypothesize	VERB
tq57np21r75	8	4	that	that	SCONJ
tq57np21r75	8	5	mna	mna	PROPN
tq57np21r75	8	6	might	might	AUX
tq57np21r75	8	7	lead	lead	VERB
tq57np21r75	8	8	to	to	ADP
tq57np21r75	8	9	deeper	deep	ADJ
tq57np21r75	8	10	biological	biological	ADJ
tq57np21r75	8	11	insights	insight	NOUN
tq57np21r75	8	12	than	than	ADP
tq57np21r75	8	13	pna	pna	PROPN
tq57np21r75	8	14	,	,	PUNCT
tq57np21r75	8	15	because	because	SCONJ
tq57np21r75	8	16	mna	mna	PROPN
tq57np21r75	8	17	can	can	AUX
tq57np21r75	8	18	simultaneously	simultaneously	ADV
tq57np21r75	8	19	capture	capture	VERB
tq57np21r75	8	20	conserved	conserve	VERB
tq57np21r75	8	21	regions	region	NOUN
tq57np21r75	8	22	between	between	ADP
tq57np21r75	8	23	more	more	ADJ
tq57np21r75	8	24	networks	network	NOUN
tq57np21r75	8	25	than	than	ADP
tq57np21r75	8	26	pna	pna	PROPN
tq57np21r75	8	27	,	,	PUNCT
tq57np21r75	8	28	though	though	SCONJ
tq57np21r75	8	29	at	at	ADP
tq57np21r75	8	30	the	the	DET
tq57np21r75	8	31	expense	expense	NOUN
tq57np21r75	8	32	of	of	ADP
tq57np21r75	8	33	higher	high	ADJ
tq57np21r75	8	34	computational	computational	ADJ
tq57np21r75	8	35	complexity	complexity	NOUN
tq57np21r75	8	36	.	.	PUNCT
tq57np21r75	9	1	in	in	ADP
tq57np21r75	9	2	this	this	DET
tq57np21r75	9	3	context	context	NOUN
tq57np21r75	9	4	,	,	PUNCT
tq57np21r75	9	5	we	we	PRON
tq57np21r75	9	6	make	make	VERB
tq57np21r75	9	7	the	the	DET
tq57np21r75	9	8	following	follow	VERB
tq57np21r75	9	9	contributions	contribution	NOUN
tq57np21r75	9	10	.	.	PUNCT
tq57np21r75	10	1	first	first	ADV
tq57np21r75	10	2	,	,	PUNCT
tq57np21r75	10	3	we	we	PRON
tq57np21r75	10	4	introduce	introduce	VERB
tq57np21r75	10	5	magna++	magna++	PROPN
tq57np21r75	10	6	,	,	PUNCT
tq57np21r75	10	7	our	our	PRON
tq57np21r75	10	8	novel	novel	ADJ
tq57np21r75	10	9	state	state	NOUN
tq57np21r75	10	10	-	-	PUNCT
tq57np21r75	10	11	of	of	ADP
tq57np21r75	10	12	-	-	PUNCT
tq57np21r75	10	13	the	the	DET
tq57np21r75	10	14	-	-	PUNCT
tq57np21r75	10	15	art	art	NOUN
tq57np21r75	10	16	pna	pna	PROPN
tq57np21r75	10	17	method	method	NOUN
tq57np21r75	10	18	.	.	PUNCT
tq57np21r75	11	1	second	second	ADV
tq57np21r75	11	2	,	,	PUNCT
tq57np21r75	11	3	we	we	PRON
tq57np21r75	11	4	introduce	introduce	VERB
tq57np21r75	11	5	our	our	PRON
tq57np21r75	11	6	new	new	ADJ
tq57np21r75	11	7	method	method	NOUN
tq57np21r75	11	8	called	call	VERB
tq57np21r75	11	9	multimagna++	multimagna++	SPACE
tq57np21r75	11	10	,	,	PUNCT
tq57np21r75	11	11	which	which	PRON
tq57np21r75	11	12	is	be	AUX
tq57np21r75	11	13	magna++	magna++	SPACE
tq57np21r75	11	14	's	's	PART
tq57np21r75	11	15	equivalent	equivalent	NOUN
tq57np21r75	11	16	for	for	ADP
tq57np21r75	11	17	mna	mna	PROPN
tq57np21r75	11	18	.	.	PUNCT
tq57np21r75	12	1	we	we	PRON
tq57np21r75	12	2	also	also	ADV
tq57np21r75	12	3	introduce	introduce	VERB
tq57np21r75	12	4	new	new	ADJ
tq57np21r75	12	5	measures	measure	NOUN
tq57np21r75	12	6	of	of	ADP
tq57np21r75	12	7	alignment	alignment	NOUN
tq57np21r75	12	8	quality	quality	NOUN
tq57np21r75	12	9	for	for	ADP
tq57np21r75	12	10	mna	mna	PROPN
tq57np21r75	12	11	.	.	PUNCT
tq57np21r75	13	1	third	third	PROPN
tq57np21r75	13	2	,	,	PUNCT
tq57np21r75	13	3	since	since	SCONJ
tq57np21r75	13	4	new	new	ADJ
tq57np21r75	13	5	pna	pna	PROPN
tq57np21r75	13	6	or	or	CCONJ
tq57np21r75	13	7	mna	mna	PROPN
tq57np21r75	13	8	methods	method	NOUN
tq57np21r75	13	9	proposed	propose	VERB
tq57np21r75	13	10	in	in	ADP
tq57np21r75	13	11	the	the	DET
tq57np21r75	13	12	literature	literature	NOUN
tq57np21r75	13	13	are	be	AUX
tq57np21r75	13	14	generally	generally	ADV
tq57np21r75	13	15	compared	compare	VERB
tq57np21r75	13	16	only	only	ADV
tq57np21r75	13	17	to	to	ADP
tq57np21r75	13	18	other	other	ADJ
tq57np21r75	13	19	methods	method	NOUN
tq57np21r75	13	20	from	from	ADP
tq57np21r75	13	21	the	the	DET
tq57np21r75	13	22	same	same	ADJ
tq57np21r75	13	23	na	na	NOUN
tq57np21r75	13	24	category	category	NOUN
tq57np21r75	13	25	,	,	PUNCT
tq57np21r75	13	26	we	we	PRON
tq57np21r75	13	27	perform	perform	VERB
tq57np21r75	13	28	the	the	DET
tq57np21r75	13	29	first	first	ADJ
tq57np21r75	13	30	ever	ever	ADJ
tq57np21r75	13	31	evaluation	evaluation	NOUN
tq57np21r75	13	32	of	of	ADP
tq57np21r75	13	33	pna	pna	PROPN
tq57np21r75	13	34	against	against	ADP
tq57np21r75	13	35	mna	mna	PROPN
tq57np21r75	13	36	,	,	PUNCT
tq57np21r75	13	37	where	where	SCONJ
tq57np21r75	13	38	we	we	PRON
tq57np21r75	13	39	shockingly	shockingly	ADV
tq57np21r75	13	40	find	find	VERB
tq57np21r75	13	41	that	that	SCONJ
tq57np21r75	13	42	in	in	ADP
tq57np21r75	13	43	general	general	ADJ
tq57np21r75	13	44	pna	pna	PROPN
tq57np21r75	13	45	is	be	AUX
tq57np21r75	13	46	both	both	CCONJ
tq57np21r75	13	47	more	more	ADV
tq57np21r75	13	48	accurate	accurate	ADJ
tq57np21r75	13	49	and	and	CCONJ
tq57np21r75	13	50	faster	fast	ADV
tq57np21r75	13	51	than	than	ADP
tq57np21r75	13	52	mna	mna	PROPN
tq57np21r75	13	53	,	,	PUNCT
tq57np21r75	13	54	which	which	PRON
tq57np21r75	13	55	has	have	VERB
tq57np21r75	13	56	many	many	ADJ
tq57np21r75	13	57	implications	implication	NOUN
tq57np21r75	13	58	for	for	ADP
tq57np21r75	13	59	future	future	NOUN
tq57np21r75	13	60	na	na	ADP
tq57np21r75	13	61	research	research	NOUN
tq57np21r75	13	62	.	.	PUNCT
tq57np21r75	14	1	fourth	fourth	ADJ
tq57np21r75	14	2	,	,	PUNCT
tq57np21r75	14	3	existing	exist	VERB
tq57np21r75	14	4	na	na	ADP
tq57np21r75	14	5	methods	method	NOUN
tq57np21r75	14	6	can	can	AUX
tq57np21r75	14	7	only	only	ADV
tq57np21r75	14	8	align	align	VERB
tq57np21r75	14	9	static	static	ADJ
tq57np21r75	14	10	networks	network	NOUN
tq57np21r75	14	11	.	.	PUNCT
tq57np21r75	15	1	however	however	ADV
tq57np21r75	15	2	,	,	PUNCT
tq57np21r75	15	3	most	most	ADJ
tq57np21r75	15	4	of	of	ADP
tq57np21r75	15	5	complex	complex	ADJ
tq57np21r75	15	6	real	real	ADJ
tq57np21r75	15	7	-	-	PUNCT
tq57np21r75	15	8	world	world	NOUN
tq57np21r75	15	9	systems	system	NOUN
tq57np21r75	15	10	evolve	evolve	VERB
tq57np21r75	15	11	over	over	ADP
tq57np21r75	15	12	time	time	NOUN
tq57np21r75	15	13	and	and	CCONJ
tq57np21r75	15	14	should	should	AUX
tq57np21r75	15	15	thus	thus	ADV
tq57np21r75	15	16	be	be	AUX
tq57np21r75	15	17	modeled	model	VERB
tq57np21r75	15	18	as	as	ADP
tq57np21r75	15	19	dynamic	dynamic	ADJ
tq57np21r75	15	20	networks	network	NOUN
tq57np21r75	15	21	.	.	PUNCT
tq57np21r75	16	1	we	we	PRON
tq57np21r75	16	2	hypothesize	hypothesize	VERB
tq57np21r75	16	3	that	that	SCONJ
tq57np21r75	16	4	aligning	align	VERB
tq57np21r75	16	5	dynamic	dynamic	ADJ
tq57np21r75	16	6	network	network	NOUN
tq57np21r75	16	7	representations	representation	NOUN
tq57np21r75	16	8	of	of	ADP
tq57np21r75	16	9	evolving	evolve	VERB
tq57np21r75	16	10	systems	system	NOUN
tq57np21r75	16	11	will	will	AUX
tq57np21r75	16	12	produce	produce	VERB
tq57np21r75	16	13	superior	superior	ADJ
tq57np21r75	16	14	alignments	alignment	NOUN
tq57np21r75	16	15	compared	compare	VERB
tq57np21r75	16	16	to	to	ADP
tq57np21r75	16	17	aligning	align	VERB
tq57np21r75	16	18	the	the	DET
tq57np21r75	16	19	systems	system	NOUN
tq57np21r75	16	20	'	'	PART
tq57np21r75	16	21	static	static	ADJ
tq57np21r75	16	22	network	network	NOUN
tq57np21r75	16	23	representations	representation	NOUN
tq57np21r75	16	24	,	,	PUNCT
tq57np21r75	16	25	as	as	SCONJ
tq57np21r75	16	26	is	be	AUX
tq57np21r75	16	27	currently	currently	ADV
tq57np21r75	16	28	done	do	VERB
tq57np21r75	16	29	.	.	PUNCT
tq57np21r75	17	1	for	for	ADP
tq57np21r75	17	2	this	this	DET
tq57np21r75	17	3	purpose	purpose	NOUN
tq57np21r75	17	4	,	,	PUNCT
tq57np21r75	17	5	we	we	PRON
tq57np21r75	17	6	introduce	introduce	VERB
tq57np21r75	17	7	the	the	DET
tq57np21r75	17	8	first	first	ADJ
tq57np21r75	17	9	ever	ever	ADV
tq57np21r75	17	10	dynamic	dynamic	ADJ
tq57np21r75	17	11	pna	pna	NOUN
tq57np21r75	17	12	method	method	NOUN
tq57np21r75	17	13	and	and	CCONJ
tq57np21r75	17	14	confirm	confirm	VERB
tq57np21r75	17	15	our	our	PRON
tq57np21r75	17	16	hypothesis	hypothesis	NOUN
tq57np21r75	17	17	.	.	PUNCT