id	sid	tid	token	lemma	pos
xp68kd19z78	1	1	mathematical	mathematical	ADJ
xp68kd19z78	1	2	modeling	modeling	NOUN
xp68kd19z78	1	3	and	and	CCONJ
xp68kd19z78	1	4	computational	computational	ADJ
xp68kd19z78	1	5	simulations	simulation	NOUN
xp68kd19z78	1	6	can	can	AUX
xp68kd19z78	1	7	be	be	AUX
xp68kd19z78	1	8	used	use	VERB
xp68kd19z78	1	9	to	to	PART
xp68kd19z78	1	10	predict	predict	VERB
xp68kd19z78	1	11	the	the	DET
xp68kd19z78	1	12	average	average	ADJ
xp68kd19z78	1	13	behavior	behavior	NOUN
xp68kd19z78	1	14	of	of	ADP
xp68kd19z78	1	15	many	many	ADJ
xp68kd19z78	1	16	cell	cell	NOUN
xp68kd19z78	1	17	-	-	PUNCT
xp68kd19z78	1	18	cell	cell	NOUN
xp68kd19z78	1	19	interactions	interaction	NOUN
xp68kd19z78	1	20	.	.	PUNCT
xp68kd19z78	2	1	in	in	ADP
xp68kd19z78	2	2	this	this	DET
xp68kd19z78	2	3	thesis	thesis	NOUN
xp68kd19z78	2	4	,	,	PUNCT
xp68kd19z78	2	5	results	result	VERB
xp68kd19z78	2	6	on	on	ADP
xp68kd19z78	2	7	modeling	model	VERB
xp68kd19z78	2	8	the	the	DET
xp68kd19z78	2	9	predatory	predatory	ADJ
xp68kd19z78	2	10	bacteria	bacteria	NOUN
xp68kd19z78	2	11	myxococcus	myxococcus	PROPN
xp68kd19z78	2	12	xanthus	xanthus	PROPN
xp68kd19z78	2	13	and	and	CCONJ
xp68kd19z78	2	14	the	the	DET
xp68kd19z78	2	15	slug	slug	NOUN
xp68kd19z78	2	16	forming	form	VERB
xp68kd19z78	2	17	amoeba	amoeba	PROPN
xp68kd19z78	2	18	dictyostelium	dictyostelium	NOUN
xp68kd19z78	2	19	discoideum	discoideum	NOUN
xp68kd19z78	2	20	are	be	AUX
xp68kd19z78	2	21	presented	present	VERB
xp68kd19z78	2	22	as	as	ADV
xp68kd19z78	2	23	well	well	ADV
xp68kd19z78	2	24	as	as	ADP
xp68kd19z78	2	25	results	result	NOUN
xp68kd19z78	2	26	on	on	ADP
xp68kd19z78	2	27	random	random	ADJ
xp68kd19z78	2	28	placement	placement	NOUN
xp68kd19z78	2	29	of	of	ADP
xp68kd19z78	2	30	non	non	ADJ
xp68kd19z78	2	31	-	-	ADJ
xp68kd19z78	2	32	overlapping	overlapping	ADJ
xp68kd19z78	2	33	cells	cell	NOUN
xp68kd19z78	2	34	in	in	ADP
xp68kd19z78	2	35	an	an	DET
xp68kd19z78	2	36	individual	individual	ADJ
xp68kd19z78	2	37	based	base	VERB
xp68kd19z78	2	38	model	model	NOUN
xp68kd19z78	2	39	,	,	PUNCT
xp68kd19z78	2	40	and	and	CCONJ
xp68kd19z78	2	41	continuous	continuous	ADJ
xp68kd19z78	2	42	limits	limit	NOUN
xp68kd19z78	2	43	of	of	ADP
xp68kd19z78	2	44	discrete	discrete	ADJ
xp68kd19z78	2	45	stochastic	stochastic	ADJ
xp68kd19z78	2	46	systems	system	NOUN
xp68kd19z78	2	47	.	.	PUNCT
xp68kd19z78	3	1	periodic	periodic	ADJ
xp68kd19z78	3	2	reversals	reversal	NOUN
xp68kd19z78	3	3	in	in	ADP
xp68kd19z78	3	4	systems	system	NOUN
xp68kd19z78	3	5	of	of	ADP
xp68kd19z78	3	6	self	self	NOUN
xp68kd19z78	3	7	-	-	PUNCT
xp68kd19z78	3	8	propelled	propel	VERB
xp68kd19z78	3	9	rod	rod	NOUN
xp68kd19z78	3	10	shaped	shape	VERB
xp68kd19z78	3	11	bacteria	bacteria	NOUN
xp68kd19z78	3	12	can	can	AUX
xp68kd19z78	3	13	lead	lead	VERB
xp68kd19z78	3	14	to	to	ADP
xp68kd19z78	3	15	ordering	order	VERB
xp68kd19z78	3	16	of	of	ADP
xp68kd19z78	3	17	cells	cell	NOUN
xp68kd19z78	3	18	,	,	PUNCT
xp68kd19z78	3	19	thus	thus	ADV
xp68kd19z78	3	20	enabling	enable	VERB
xp68kd19z78	3	21	them	they	PRON
xp68kd19z78	3	22	to	to	PART
xp68kd19z78	3	23	effectively	effectively	ADV
xp68kd19z78	3	24	resolve	resolve	VERB
xp68kd19z78	3	25	traffic	traffic	NOUN
xp68kd19z78	3	26	jams	jam	NOUN
xp68kd19z78	3	27	formed	form	VERB
xp68kd19z78	3	28	during	during	ADP
xp68kd19z78	3	29	swarming	swarm	VERB
xp68kd19z78	3	30	and	and	CCONJ
xp68kd19z78	3	31	maximize	maximize	VERB
xp68kd19z78	3	32	their	their	PRON
xp68kd19z78	3	33	swarming	swarm	VERB
xp68kd19z78	3	34	rate	rate	NOUN
xp68kd19z78	3	35	.	.	PUNCT
xp68kd19z78	4	1	a	a	DET
xp68kd19z78	4	2	connection	connection	NOUN
xp68kd19z78	4	3	is	be	AUX
xp68kd19z78	4	4	described	describe	VERB
xp68kd19z78	4	5	between	between	ADP
xp68kd19z78	4	6	a	a	DET
xp68kd19z78	4	7	one	one	NUM
xp68kd19z78	4	8	dimensional	dimensional	ADJ
xp68kd19z78	4	9	cell	cell	NOUN
xp68kd19z78	4	10	-	-	PUNCT
xp68kd19z78	4	11	based	base	VERB
xp68kd19z78	4	12	stochastic	stochastic	ADJ
xp68kd19z78	4	13	model	model	NOUN
xp68kd19z78	4	14	of	of	ADP
xp68kd19z78	4	15	reversing	reverse	VERB
xp68kd19z78	4	16	non	non	ADJ
xp68kd19z78	4	17	-	-	ADJ
xp68kd19z78	4	18	overlapping	overlapping	ADJ
xp68kd19z78	4	19	bacteria	bacteria	NOUN
xp68kd19z78	4	20	and	and	CCONJ
xp68kd19z78	4	21	a	a	DET
xp68kd19z78	4	22	non	non	ADJ
xp68kd19z78	4	23	-	-	ADJ
xp68kd19z78	4	24	linear	linear	ADJ
xp68kd19z78	4	25	diffusion	diffusion	NOUN
xp68kd19z78	4	26	equation	equation	NOUN
xp68kd19z78	4	27	.	.	PUNCT
xp68kd19z78	5	1	boltzmannmatano	boltzmannmatano	PROPN
xp68kd19z78	5	2	analysis	analysis	NOUN
xp68kd19z78	5	3	is	be	AUX
xp68kd19z78	5	4	used	use	VERB
xp68kd19z78	5	5	to	to	PART
xp68kd19z78	5	6	determine	determine	VERB
xp68kd19z78	5	7	the	the	DET
xp68kd19z78	5	8	nonlinear	nonlinear	ADJ
xp68kd19z78	5	9	diffusion	diffusion	NOUN
xp68kd19z78	5	10	equation	equation	NOUN
xp68kd19z78	5	11	corresponding	correspond	VERB
xp68kd19z78	5	12	to	to	ADP
xp68kd19z78	5	13	the	the	DET
xp68kd19z78	5	14	specific	specific	ADJ
xp68kd19z78	5	15	reversal	reversal	NOUN
xp68kd19z78	5	16	frequency	frequency	NOUN
xp68kd19z78	5	17	.	.	PUNCT
xp68kd19z78	6	1	it	it	PRON
xp68kd19z78	6	2	is	be	AUX
xp68kd19z78	6	3	shown	show	VERB
xp68kd19z78	6	4	that	that	SCONJ
xp68kd19z78	6	5	cell	cell	NOUN
xp68kd19z78	6	6	populations	population	NOUN
xp68kd19z78	6	7	with	with	ADP
xp68kd19z78	6	8	high	high	ADJ
xp68kd19z78	6	9	reversal	reversal	NOUN
xp68kd19z78	6	10	frequencies	frequency	NOUN
xp68kd19z78	6	11	are	be	AUX
xp68kd19z78	6	12	able	able	ADJ
xp68kd19z78	6	13	to	to	PART
xp68kd19z78	6	14	spread	spread	VERB
xp68kd19z78	6	15	out	out	ADP
xp68kd19z78	6	16	effectively	effectively	ADV
xp68kd19z78	6	17	at	at	ADP
xp68kd19z78	6	18	high	high	ADJ
xp68kd19z78	6	19	densities	density	NOUN
xp68kd19z78	6	20	.	.	PUNCT
xp68kd19z78	7	1	if	if	SCONJ
xp68kd19z78	7	2	the	the	DET
xp68kd19z78	7	3	cells	cell	NOUN
xp68kd19z78	7	4	rarely	rarely	ADV
xp68kd19z78	7	5	reverse	reverse	VERB
xp68kd19z78	7	6	then	then	ADV
xp68kd19z78	7	7	they	they	PRON
xp68kd19z78	7	8	are	be	AUX
xp68kd19z78	7	9	able	able	ADJ
xp68kd19z78	7	10	to	to	PART
xp68kd19z78	7	11	spread	spread	VERB
xp68kd19z78	7	12	out	out	ADP
xp68kd19z78	7	13	at	at	ADP
xp68kd19z78	7	14	lower	low	ADJ
xp68kd19z78	7	15	densities	density	NOUN
xp68kd19z78	7	16	but	but	CCONJ
xp68kd19z78	7	17	are	be	AUX
xp68kd19z78	7	18	not	not	PART
xp68kd19z78	7	19	able	able	ADJ
xp68kd19z78	7	20	to	to	PART
xp68kd19z78	7	21	spread	spread	VERB
xp68kd19z78	7	22	out	out	ADP
xp68kd19z78	7	23	at	at	ADP
xp68kd19z78	7	24	higher	high	ADJ
xp68kd19z78	7	25	densities	density	NOUN
xp68kd19z78	7	26	.	.	PUNCT
xp68kd19z78	8	1	the	the	DET
xp68kd19z78	8	2	amoeba	amoeba	PROPN
xp68kd19z78	8	3	dictyostelium	dictyostelium	NOUN
xp68kd19z78	8	4	is	be	AUX
xp68kd19z78	8	5	able	able	ADJ
xp68kd19z78	8	6	to	to	PART
xp68kd19z78	8	7	sense	sense	VERB
xp68kd19z78	8	8	the	the	DET
xp68kd19z78	8	9	location	location	NOUN
xp68kd19z78	8	10	of	of	ADP
xp68kd19z78	8	11	other	other	ADJ
xp68kd19z78	8	12	members	member	NOUN
xp68kd19z78	8	13	of	of	ADP
xp68kd19z78	8	14	its	its	PRON
xp68kd19z78	8	15	species	specie	NOUN
xp68kd19z78	8	16	and	and	CCONJ
xp68kd19z78	8	17	aggregate	aggregate	NOUN
xp68kd19z78	8	18	,	,	PUNCT
xp68kd19z78	8	19	using	use	VERB
xp68kd19z78	8	20	chemotaxis	chemotaxis	NOUN
xp68kd19z78	8	21	.	.	PUNCT
xp68kd19z78	9	1	during	during	ADP
xp68kd19z78	9	2	aggregation	aggregation	NOUN
xp68kd19z78	9	3	,	,	PUNCT
xp68kd19z78	9	4	the	the	DET
xp68kd19z78	9	5	amoeba	amoeba	PROPN
xp68kd19z78	9	6	creates	create	VERB
xp68kd19z78	9	7	and	and	CCONJ
xp68kd19z78	9	8	follows	follow	VERB
xp68kd19z78	9	9	the	the	DET
xp68kd19z78	9	10	gradient	gradient	NOUN
xp68kd19z78	9	11	of	of	ADP
xp68kd19z78	9	12	a	a	DET
xp68kd19z78	9	13	diffusive	diffusive	ADJ
xp68kd19z78	9	14	chemical	chemical	NOUN
xp68kd19z78	9	15	.	.	PUNCT
xp68kd19z78	10	1	through	through	ADP
xp68kd19z78	10	2	local	local	ADJ
xp68kd19z78	10	3	behavioral	behavioral	ADJ
xp68kd19z78	10	4	chemotactic	chemotactic	ADJ
xp68kd19z78	10	5	rules	rule	NOUN
xp68kd19z78	10	6	,	,	PUNCT
xp68kd19z78	10	7	the	the	DET
xp68kd19z78	10	8	cells	cell	NOUN
xp68kd19z78	10	9	are	be	AUX
xp68kd19z78	10	10	able	able	ADJ
xp68kd19z78	10	11	to	to	PART
xp68kd19z78	10	12	cluster	cluster	VERB
xp68kd19z78	10	13	together	together	ADV
xp68kd19z78	10	14	and	and	CCONJ
xp68kd19z78	10	15	create	create	VERB
xp68kd19z78	10	16	slugs	slug	NOUN
xp68kd19z78	10	17	.	.	PUNCT
xp68kd19z78	11	1	pde	pde	PROPN
xp68kd19z78	11	2	equations	equation	NOUN
xp68kd19z78	11	3	describing	describe	VERB
xp68kd19z78	11	4	this	this	DET
xp68kd19z78	11	5	behavior	behavior	NOUN
xp68kd19z78	11	6	have	have	AUX
xp68kd19z78	11	7	been	be	AUX
xp68kd19z78	11	8	derived	derive	VERB
xp68kd19z78	11	9	in	in	ADP
xp68kd19z78	11	10	(	(	PUNCT
xp68kd19z78	11	11	lushnikov	lushnikov	PROPN
xp68kd19z78	11	12	,	,	PUNCT
xp68kd19z78	11	13	2008	2008	NUM
xp68kd19z78	11	14	)	)	PUNCT
xp68kd19z78	11	15	.	.	PUNCT
xp68kd19z78	12	1	existence	existence	NOUN
xp68kd19z78	12	2	,	,	PUNCT
xp68kd19z78	12	3	uniqueness	uniqueness	NOUN
xp68kd19z78	12	4	and	and	CCONJ
xp68kd19z78	12	5	boundedness	boundedness	NOUN
xp68kd19z78	12	6	of	of	ADP
xp68kd19z78	12	7	solutions	solution	NOUN
xp68kd19z78	12	8	of	of	ADP
xp68kd19z78	12	9	this	this	DET
xp68kd19z78	12	10	equation	equation	NOUN
xp68kd19z78	12	11	are	be	AUX
xp68kd19z78	12	12	proven	prove	VERB
xp68kd19z78	12	13	in	in	ADP
xp68kd19z78	12	14	(	(	PUNCT
xp68kd19z78	12	15	alber	alber	PROPN
xp68kd19z78	12	16	,	,	PUNCT
xp68kd19z78	12	17	2009	2009	NUM
xp68kd19z78	12	18	)	)	PUNCT
xp68kd19z78	12	19	and	and	CCONJ
xp68kd19z78	12	20	this	this	DET
xp68kd19z78	12	21	thesis	thesis	NOUN
xp68kd19z78	12	22	.	.	PUNCT
xp68kd19z78	13	1	the	the	DET
xp68kd19z78	13	2	1d	1d	NUM
xp68kd19z78	13	3	steady	steady	ADJ
xp68kd19z78	13	4	state	state	NOUN
xp68kd19z78	13	5	solutions	solution	NOUN
xp68kd19z78	13	6	and	and	CCONJ
xp68kd19z78	13	7	their	their	PRON
xp68kd19z78	13	8	stability	stability	NOUN
xp68kd19z78	13	9	are	be	AUX
xp68kd19z78	13	10	also	also	ADV
xp68kd19z78	13	11	analyzed	analyze	VERB
xp68kd19z78	13	12	.	.	PUNCT
xp68kd19z78	14	1	it	it	PRON
xp68kd19z78	14	2	is	be	AUX
xp68kd19z78	14	3	predicted	predict	VERB
xp68kd19z78	14	4	that	that	SCONJ
xp68kd19z78	14	5	stable	stable	ADJ
xp68kd19z78	14	6	solutions	solution	NOUN
xp68kd19z78	14	7	correspond	correspond	VERB
xp68kd19z78	14	8	to	to	ADP
xp68kd19z78	14	9	biologically	biologically	ADV
xp68kd19z78	14	10	realizable	realizable	ADJ
xp68kd19z78	14	11	aggregates	aggregate	NOUN
xp68kd19z78	14	12	,	,	PUNCT
xp68kd19z78	14	13	and	and	CCONJ
xp68kd19z78	14	14	conditions	condition	NOUN
xp68kd19z78	14	15	for	for	ADP
xp68kd19z78	14	16	determining	determine	VERB
xp68kd19z78	14	17	whether	whether	SCONJ
xp68kd19z78	14	18	or	or	CCONJ
xp68kd19z78	14	19	not	not	PART
xp68kd19z78	14	20	certain	certain	ADJ
xp68kd19z78	14	21	amoeba	amoeba	PROPN
xp68kd19z78	14	22	aggregation	aggregation	NOUN
xp68kd19z78	14	23	patterns	pattern	NOUN
xp68kd19z78	14	24	will	will	AUX
xp68kd19z78	14	25	occur	occur	VERB
xp68kd19z78	14	26	in	in	ADP
xp68kd19z78	14	27	nature	nature	NOUN
xp68kd19z78	14	28	are	be	AUX
xp68kd19z78	14	29	presented	present	VERB
xp68kd19z78	14	30	.	.	PUNCT