key: cord-0006194-vbq9izw3 authors: Coban, Cevayir; Lee, Michelle Sue Jann; Ishii, Ken J. title: Tissue-specific immunopathology during malaria infection date: 2018-01-15 journal: Nat Rev Immunol DOI: 10.1038/nri.2017.138 sha: 687f6e9f99ed200d9535ce891ab09e3223519ffa doc_id: 6194 cord_uid: vbq9izw3 Systemic inflammation mediated by Plasmodium parasites is central to malaria disease and its complications. Plasmodium parasites reside in erythrocytes and can theoretically reach all host tissues via the circulation. However, actual interactions between parasitized erythrocytes and host tissues, along with the consequent damage and pathological changes, are limited locally to specific tissue sites. Such tissue specificity of the parasite can alter the outcome of malaria disease, determining whether acute or chronic complications occur. Here, we give an overview of the recent progress that has been made in understanding tissue-specific immunopathology during Plasmodium infection. As knowledge on tissue-specific host–parasite interactions accumulates, better treatment modalities and targets may emerge for intervention in malaria disease. SUPPLEMENTARY INFORMATION: The online version of this article (doi:10.1038/nri.2017.138) contains supplementary material, which is available to authorized users. Activation-induced cytidine deaminase (AID) . An enzyme that is required for two crucial B cell events in the germinal centre: somatic hypermutation and class-switch recombination. by incomplete immunity to malaria causes long-term hidden pathologies 20 . One such pathology is Burkitt lymphoma, a cancer that develops in both childhood and adulthood in Africa and that is closely related to P. falciparum and Epstein-Barr virus co-endemicicity 21 . The robust and long-lasting expansion of germinal centre B cell populations that occurs during Plasmodium infection may induce increased activation-induced cytidine deaminase (AID) expression, eventually leading to chromosomal translocations [22] [23] [24] that predispose to the development of lymphoma in immune tissues. An increasing recognition of the association between malaria infection and physical growth retardation in children in Africa, regardless of nutritional status 25, 26 , suggests a detrimental effect of chronic malaria infection on growth, possibly via an effect on the bone tissue environ ment 27 . Nevertheless, any Plasmodium spp. causing infection in humans result in varying degrees of complications, which can not only be severe and life threatening but can also have a long-term impact on patients' quality of life even after recovery. In this Review, we focus on how systemic infection by Plasmodium parasites causes local but tissue-specific immunopathologies during the blood stage of infection, mainly through the manipulation of inter-tissue interactions between the blood and other host tissues that often result in dysfunction of certain, but not all, organs. Acute systemic immune activation, such as pro-inflammatory cytokine production, lymphocyte activation and vessel congestion, is evident; however, how these pathological events affect each tissue or organ is not understood well. Current interventions for malaria are based on the administration of anti malarial drugs aimed at killing parasites and on supportive care to reduce systemic symptoms, such as coma, high fever, severe anaemia and acidosis. In this Review, we emphasize the need to focus on host interactions with Plasmodium parasites at various tissue levels and the importance of targeting local and specific organ failure and/or pathologies during, as well as long after, infection. These pathologies might be critical for determining diagnostic as well as therapeutic targets for the development of novel adjunct therapies to be used in combination with current antimalarials. We describe new evidence and new ways of targeting infected tissues of a few, but not all, unique organs such as the brain, gut and bones. We initially summarize how the blood tissue plays a central role in the initial pathogenesis caused by Plasmodium parasites, following which we explore the interaction of infected blood tissue with specific organs composed of multiple, unique interacting tissue layers. Largely owing to limitations of space, topics regarding the sporozoite stages of infection in the liver and those on the innate immune recognition of Plasmodium para sites 28, 29 are out of the scope of this Review. In fact, Plasmodium parasites do possess several ligands used to manipulate host cell invasion that could potentially be exploited as host factor targets for anti-malaria therapy 30, 31 , a notion close to the topic of this Review, but we exclude and leave this to an excellent recent article focusing on this topic 32 . Pathology within the blood tissue Blood is a tissue (BOX 1) that is formed by the plasma and blood cells (that is, erythrocytes, platelets and leukocytes) and is primarily located in the blood vessels. The infection of erythrocytes by Plasmodium parasites results in extensive erythrocyte remodelling and dysfunction followed by cell lysis, which contribute to the pathology of severe anaemia. Anaemia. Plasmodium parasites (a merozoite form) are released into the bloodstream from liver hepatocytes within specialized vesicles called merosomes 33 and continue a repetitive erythrocyte-invasion cycle in the blood tissue. Merozoites released from the liver enter into erythro cytes through a very dynamic and complex process 34, 35 (FIG. 1) . Once erythrocytic infection is established, continuous destruction of erythrocytes due to schizont rupture contributes to anaemia. A moderate degree of anaemia is caused simply by the naturally occurring life cycle of para sites in erythrocytes. However, studies in both humans and mice have clearly indicated an increased removal of infected and uninfected erythrocytes that plays an essential and major role in severe malarial anaemia [36] [37] [38] . Clinical observations and mathematical modelling have suggested that for each infected erythrocyte, approximately 10 uninfected RBCs are removed during malaria 37 . Chronic anaemia may also be mediated by the generation of self-reactive anti-phosphatidylserine antibodies 42 . Phosphatidylserine on infected erythrocytes is thought to be pathologically exposed to the immune system during malaria, leading to the generation of anti-phosphatidylserine antibodies. Under usual circumstances, uninfected erythrocytes, mainly young cells called reticulocytes, express high levels of CD47, a 'do not eat me' signal 43, 44 , which allows them to escape from phagocytosis. However, young erythrocytes generated during malaria expose phosphatidylserine earlier, thus leading anti-phosphatidylserine antibodies to bind to uninfected erythrocytes and facilitate their clearance, contributing to chronic anaemia. One of the outcomes of the destruction of high numbers of erythrocytes during malaria is an increase in intravascular haem release 45, 46 , which is an important factor for neutrophil activation 47 but in turn could be the reason for increased oxidative damage and thus decreased macrophage function and the neutrophil exhaustion observed during malaria. This implies that not only erythrocytes but also blood tissue components including various leukocytes collectively react to the presence of Plasmodium parasites (covered previously by seminal review articles 35, 48, 49 ) and their related products in the blood circulation and tissues (FIG. 1) . Erythrocytes undergo extensive deformation and remodelling after invasion by Plasmodium parasites. While remodelling allows nutrient acquisition and parasite growth, it leads to changes in erythrocyte structure, with an increase in rigidity 50 and rosetting 51 . Hence, the mature schizont stages easily sequester in the host microvasculature, mostly during P. falciparum and P. knowlesi infection and to a lesser extent during P. vivax infection 50 , whereas immature ring stages freely circulate in the vessels. Plasmodium berghei ANKA infection in mice shows a similar sequestration phenotype [52] [53] [54] [55] , and in this instance, sequestration via CD36 may be beneficial for the survival of the parasite 56 . It is believed that infected erythrocytes, mostly those in the schizont stages of parasite infection, adhere along with activated leukocytes (mainly CD8 + T cells) to the endothelial cells of small blood vessels in the brain via binding to CD36, intercellular adhesion molecule 1 (ICAM1), endothelial protein C receptor (EPCR) and platelet endothelial cell adhesion molecule (PECAM1) [57] [58] [59] [60] . However, endothelial cell acti vation can occur without direct adhesion of leukocytes to the endothelial cells, possibly as a result of metabolites produced by leukocytes or parasites 61 . Indeed, there are unidentified soluble factors released by iRBCs that cause endothelial cell pathology 62 . In line with this, endothelial cells, iRBCs, platelets, leukocytes and monocytes were shown to increase their release of extracellular vesicles during Plasmodium infection, and this contributed to inflammation and correlated with disease severity 63 . Extracellular vesicles are mostly released from iRBCs during schizogony and contain RBC components, parasite proteins and various RNAs that can activate innate immune cells 64 . In addition, endothelial cells have been shown to act as antigen-presenting cells (APCs) through the phagocytosis of merozoites and the presentation of malarial antigens to CD8 + T cells, which leads to IFNγmediated and perforin-mediated disruption of the blood-brain barrier (BBB) 61 . Most of these models of malaria-induced pathology are still under debate, and more evidence from both humans and animal models is clearly needed. Overall, while the process of sequestration is not completely understood, it is known to cause obstruction of blood flow in small capillaries and post-capillary venules (PCVs), endothelial cell activation and inflammation and severe pathology in many organs including lung, adipose tissue, spleen and brain 52, 53, 65, 66 (FIG. 1) . Plasmodium-infected erythrocytes, is transported to organs via blood vessels. Between large arteries and veins, various smaller sized vessels such as arterioles, capillaries and PCVs are present and have a role in controlling blood pressure and velocity in organs (FIG. 2a) . The speed of blood flow substantially decreases as the blood enters arterioles, drops dramatically again in the capillaries and then slightly increases in the venules and veins (FIG. 2a) . Depending on the size and tissue environment, blood vessel structures vary. Generally, the smaller the diameter of the vessel, the less smooth muscle it contains. Capillaries, which play a major role in exchanging materials in blood, are the smallest vessels and are composed of endothelial cells with firm tight junctions and a basement membrane and do not include a smooth muscle layer (FIG. 2b) . Unlike capillaries, PCVs may have a few thin smooth muscle A tissue operates as an orchestration of large numbers of similar cells for a specific function. Mammals have four basic types of tissues: epithelial tissue, muscle tissue, nerve tissue and connective tissue. Two or more different tissues form and function as an organ. In general, the cells in their related tissue environment and organ are found in harmony, but during infection and inflammation, this harmony is likely to be disrupted. Depending on the organ that the tissue or tissues interact with and support, multiple specific layers are present, which gives tissue specificity to healthy and diseased conditions. Connective tissue deserves special attention because it includes various subcategories such as blood tissue, which is a major target of Plasmodium parasites. This tissue, which mainly connects and supports various other tissues, is composed of various subtypes in addition to blood tissue, such as adipose tissue, areolar tissue, cartilage and bone tissue, lymphatic tissue and fibrous tissue. The main characteristics of connective tissues are that they contain an extracellular matrix composed of various collagen and/or elastin fibres, they contain interstitial fluid and they are vascularized with blood vessels. Importantly, blood vessels are lined by endothelial cells, a component of epithelial tissue, and covered by smooth muscles (a muscle tissue); they carry blood cells, infected erythrocytes and various materials to the tissues and organs of the entire body, suggesting that even at the basic blood vessel level, many complex tissues specifically interact with each other. Because tissue specificity occurs within an organization of different interacting tissues, it is reasonable to hypothesize that Plasmodium parasites will reach different tissues and organ environments and develop unique and specific interactions with other tissues via blood tissue. Also known as Virchow-Robin spaces. Spaces located between brain-penetrating pial vessels and the brain tissue grey matter. (ISF). The solution present extracellularly, that fills the spaces between cells and tissues. (CSF). The solution surrounding the brain and spinal cord, which mainly serves to protect these two important organs. layers (FIG. 2c) . Importantly, depending on the organ, capillaries and PCVs interact with additional cells in tissues (FIG. 2d) . For instance, brain capillaries and PCVs are additionally surrounded by pericytes, astrocyte end-feet and microglia (FIG. 2d) . In particular, PCVs differ from capillaries in that they have leakier tight junctions and thus, may create perivascular spaces that APCs can easily home to 67 and that allow for the infiltration of inflammatory cells during inflammatory conditions 68 . Moreover, the capillary beds in various organs are mostly in close proximity to lymphatic capillaries, into which drain interstitial fluid (ISF; mainly leukocytes) and materials coming from blood vessels. The ISF drained into the lymphatic vessels reaches the lymph nodes and finally returns to the final destination veins (FIG. 2a) . Therefore, it is reasonable to think that the type and diameter of a blood vessel in a specific organ in addition to the specific connective tissue and smooth muscle that is present to support vessel integrity may determine the degree of sequestration of Plasmodium parasites and the outcome of disease. The walls of the smallest capillaries and PCVs are presumably more susceptible to internal changes occurring in the vessels. Therefore, in the following sections, we detail the blood vessels within a few organs, such as the brain, gut and bones, and highlight their unique involvement with iRBCs during malaria. Tissue pathology within the brain The brain is severely affected by P. falciparum infection and to a lesser extent by P. knowlesi and P. vivax infections. This unique brain pathology, known as cerebral malaria, involves convulsions, coma and high fever and develops with the presence of mostly ring-stage infected erythrocytes in the periphery (suggesting a sequestration of late-stage parasites in the organs) [69] [70] [71] . Disruption of BBB integrity is an established outcome in cerebral malaria and may cause brain swelling and death in both humans and animals 72, 73 . The activation of blood tissue components and their effect on brain immune cells (microglia, astrocytes) have been addressed 53,74-80 , but how an obligate erythrocyte-resident pathogen can cause BBB disruption is not well understood. Although the brain is considered an immune-privileged organ that is protected by the presence of the tight and selective BBB and by the lack of lymphatic drainage (a notion that has been disputed recently 81, 82 ), the loss of BBB integrity due to the direct invasion and inflammation of meninges by various extracellular pathogens is well known 83 . To understand why and how brain tissue is affected during malaria, we should consider recent advances in the neuroscience field, which could help to expand our understanding of cerebral malaria pathogenesis and development. The central nervous system (CNS) is composed of the brain and spinal cord, which are protected by the meninges (formed by three layers: dura mater, arachnoid mater and pia mater) and are associated with two types of fluids: cerebrospinal fluid (CSF) running through the subarachnoid space and ISF in the brain and spinal cord parenchyma (BOX 2) . CSF is derived from plasma but has far fewer proteins, no erythrocytes, very Nature Reviews | Immunology Cells Neutrophils, monocytes, platelets, T and B cells etc. Brain, lung, kidney, intestine, bone etc. Following the release of Plasmodium merozoites from infected hepatocytes into the bloodstream, repetitive erythrocyte-invasion cycles occur in the blood. This leads to the release of several parasite by-products, such as haemozoin, and the parasites themselves into the bloodstream. The blood-stage cycle of Plasmodium infection causes various pathologies, such as anaemia, toxic haem release, immune cell activation (modulation of platelets, neutrophils, monocytes, macrophages, T cells and B cells) and can cause a cytokine and chemokine storm. In blood tissue, infected red blood cells (iRBCs) and their products may interact with other infected and uninfected RBCs (causing rosetting), or they may interact with immune cell populations (causing a cytokine storm) or with the endothelial cells of blood vessels (causing RBC sequestration and microhaemorrhage). These cell-cell interactions have organ specificity and thus take place in specific tissue environments, resulting in specific immunopathologies. An organ located on the cribriform plate, which functions in smell. The bulb surface is surrounded by complex olfactory nerve structures that originate from the nasal cavity and project to the brain. Small trabecular capillary structures are the main vessel structures inside the bulb. few leukocytes and higher sodium, chloride and magnesium contents. ISF fills the basement membranes of brain capillaries, where most of the exchange between blood and the CNS occurs. The selective BBB inside the brain blood vessels, especially capillaries, is composed of uniquely specialized endothelial cells with intracellular tight junctions, pericytes, astrocyte end-feet and microglia in addition to the basement membrane, suggesting that blood vessel structures in the brain differ from those in other organs of the body, with a unique involvement of brain cell astrocytes and microglia in disease processes 84 (FIG. 2d) . Advancing our understanding of brain physiology (BOX 2) clearly has important implications for neurological diseases, such as Alzheimer disease and multiple sclerosis 85, 86 , as well as for cerebral malaria. Indeed, recent preclinical studies using cutting-edge imaging technologies, such as ultra-high-field 11.7 T magnetic resonance imaging (MRI) and multi photon live imaging microscopy, in experimental cerebral malaria models have expanded our understanding of how cerebral malaria develops. Below, we consider the roles of the retina, olfactory bulb and the perivascular spaces of the brain during cerebral malaria. Arteries supplying blood to the brain divide into smaller arteries on Figure 2 | Interaction of Plasmodium-infected red blood cells with various blood vessels and lymphatics. a | Infected red blood cells (iRBCs) circulate in blood vessels, which vary in size from large arteries to veins, with blood flow running from arteries, arterioles, capillaries and post-capillary venules (PCVs) to venules and veins, providing controlled blood pressure and velocity in organs. The speed of blood flow is lowest in capillaries and PCVs. In various organs, these capillary beds are mostly near lymphatic vessels, through which interstitial fluid and materials coming from blood vessels drain the lymph nodes and finally return to veins. iRBCs and iRBC-mediated immune responses, therefore, may have profound effects on these smaller vascular beds in each organ. b | Capillaries have only an endothelial cell wall and no smooth muscle; therefore, they are in close contact with iRBCs. c | Two capillaries fuse and form PCVs, which may have some smooth muscle and where leukocyte rolling can occur. d | Capillaries and PCVs in the brain are additionally surrounded by pericytes, astrocyte end-feet and microglia; iRBC-related events in capillaries are sensed immediately. A small, perforated bone structure that lies on top of the nasal cavity and supports the olfactory bulb. Olfactory nerves running from the nasal cavity to the olfactory bulb pass thorough cribriform plate. the pial surface and penetrate into the brain parenchyma before further dividing into arterioles. Arterioles (and venules) are surrounded by perivascular space which is filled with ISF drained from the brain parenchyma (FIG. 3a) . A newly defined 'glymphatic system' has been proposed in which the glia limitans, a barrier comprising astrocyte end-feet that surrounds small capillaries and veins, creates perivascular spaces via aquaporin 4 (AQP4) channels. The AQP4 channels facilitate the flux of ISF into perivascular spaces to be mixed with CSF 87, 88 , and this eventually contributes to the clearance of particles from the CSF. Interestingly, dilatation at perivascular spaces and astroglia and reduced expression of AQP4 protein have been reported during cerebral malaria in animal models 89, 90 . Furthermore, in the absence of AQP4, mice with cerebral malaria succumbed to death more quickly 90 , suggesting AQP4 has protective roles during cerebral malaria, perhaps in controlling liquid exchange, oedema and cell transmigration at the BBB. APCs with phagocytic properties such as dendritic cells and macrophages located in the pial surfaces and perivascular spaces have been shown to present antigens to T cells in various CNS diseases 91 . As visualized by electron microscopy and intravital two-photon microscopy, it seems that leukocytes and CD8 + T cells, and probably iRBCs or their products, increasingly accumulate in perivascular spaces in very deep and branching vessels during cerebral malaria [92] [93] [94] [95] . These phagocytic APCs and activated endothelial cells in vessels have the capacity to present malarial antigens 96, 97 . Furthermore, all these events that are mediated by IFNγ could be reversed by blocking the adhesion molecules Box 2 | The steady state brain drainage system Owing to the presence of the highly selective blood-brain-barrier (BBB), the brain has long been considered to have no classical lymphatic system and thus be an immune-privileged organ (see the figure) . In homeostatic conditions, the cerebrospinal fluid (CSF) is continuously produced by the choroid plexus and drained into the bloodstream via arachnoid granulations in the venous sinuses or nasal lymphatics under the cribriform plate next to either the olfactory nerves or the spinal and cranial nerve sheaths. Immune surveillance via selective epithelial cells and homeostatic leukocyte trafficking in CSF have been acknowledged 145 ; however, recent studies by Louveau et al. 82 and Aspelund et al. 81 have challenged previous knowledge by demonstrating the presence of a classical lymphatic drainage system located in the brain meninges. The authors clearly showed that this lymphatic network works alongside the classical known CSF drainage system, with the additional capacity to drain other constituents such as toxic macromolecules and immune cells into the deep cervical lymph nodes, providing evidence of a connection between the CSF, the brain and the periphery. Essentially, these newly identified brain lymphatic vessels lay in the dura mater and collect CSF and interstitial fluid (ISF) together with macromolecules such as amyloids and immune cells from perivascular spaces (PVSs) of the brain parenchyma. Similar lymphatics are also present around another immune-privileged organ, the eye (along with the optic nerve) 146 , and over the olfactory bulb, aligned throughout meninges as simple narrow vessels that become wider in the transverse sinuses, ultimately reaching the cerebellum. All lymphatic vessels finally drain into the deep cervical lymph nodes. It is of note that similar to blood vessels, these lymphatic vessels are different in size depending on their anatomical location in the central nervous system, and owing to that, their interaction with local blood vessels or astrocyte end-feet may be different during homeostasis than in diseased conditions. PCV, post-capillary venule. Figure 3 | Infected red blood cells in close proximity with brain components. a | Small arteries on the pial surface of the brain penetrate into the brain parenchyma and further divide into arterioles; these are surrounded by perivascular space (PVS) which is filled with interstitial fluid (ISF) that has drained from the brain parenchyma. Arterioles become capillaries, venules then veins, which finally drain into dural venous sinuses, and each of these areas potentially contain abundant infected red blood cells (iRBCs), as well as lymphocytes such as CD8 + T cells. Lymphatic vessels located in the dura carry immune cells and cerebrospinal fluid (CSF) into deep cervical lymph nodes. b | The retina is rich in photoreceptors (cones, bipolar cells and ganglions), nerve cells and complex blood vessels, especially capillary structures surrounded by Müller cells, a retina-specific astrocyte-like cell. The optic nerve serves as a connector between the retinal nervous tissue and the brain, where meningeal membranes, dura lymphatics and CSF cover the optic nerve up to the retina border. This area may contain abundant iRBCs. c | The olfactory bulb is surrounded by meninges of brain dura and arachnoid and pial layers. CSF similarly runs throughout the bulb and reaches the cribriform plate area. Olfactory nerves originate from the nasal mucosa and terminate in the olfactory bulb through the cribriform plate, which is also the route of the blood vessels surrounding the olfactory nerves. These olfactory nerves project any signal for smell to the olfactory bulb and the brain. Inside the olfactory bulb, very dense blood capillaries are oriented in different directions (radially and tangentially), with thin astrocyte end-feet surrounding the vessels, and sense iRBC-related events and secrete several cytokines and/or chemokines including CC-chemokine ligand 21 (CCL21). Blood capillaries easily bleed during cerebral malaria. PCV, post-capillary venule. A mechanism explaining the relationship between neuronal activity and the cerebral blood vessels and the blood flow. very late antigen 4 (VLA4) and lymphocyte function-associated antigen 1 (LFA1) (ligands for vascular endothelial adhesion protein 1 (VCAM1) and ICAM1, respectively), which are expressed on activated CD8 + T cells during cerebral malaria 98 . One of the important features of inflammation in perivascular spaces is that the parasite and inflammatory products may directly activate astrocytes 53, 99 , microglia 77 and neurons 100 , and may cause an increase in the levels of protein S100B (a biomarker for astrocytes) and in the levels of the microtubule-associated protein tau (a biomarker for degenerated axons) in CSF 80 . Nevertheless, future studies are needed to provide direct evidence of this. It would also be interesting to investigate in the future whether there are other types of perivascular spaces found at different locations in the brain 101, 102 , because pia mater also covers the cerebellum and other CNS areas, such as the spinal cord. Therefore, the interaction of perivascular spaces with small blood vessels may vary depending on the anatomical location and unique architecture of the tissue, for example, in the brain cortex, spinal cord, cerebellum or olfactory bulb. The back of the eye ball is lined by the retina, with the optic nerve in the middle and going through to the brain. The optic nerve serves as a connector between the nervous tissue of the retina and the brain, where brain meninges, dura mater lymphatics and CSF cover up the optic nerve up until the retina border. The retina is rich in photo receptors, nerve cells and complex blood vessels, especially capillary structures (FIG. 3b) . Retinal changes (such as haemorrhages, multiple peripheral and macular patchy whitening areas and papilloedema) have been commonly observed in children and in adults who develop sudden comatose cerebral malaria symptoms after a few days of fever [103] [104] [105] . These retinal changes occur in areas that show high sequestration of parasites accompanied by thrombi (composed of fibrin and platelets) 106, 107 , which cause impaired capillary perfusion 108, 109 and are well correlated with the severity of disease 110 . Interestingly, other areas in the eye, such as the optic nerve head, ciliary body and iris, are similarly affected by iRBCs 110 , indicating that specific blood vessel similarities may occur within other parts of the brain. Retinal homeostasis is maintained through neurovascular coupling involving astrocytes, Müller cells (a specific type of glial cell found in the retina) and resident retinal microglia, with Müller cells, pericytes and astrocytes mainly ensheathing the retinal blood capillaries 111 . The observation that the accumulation of fluid between processes of Müller cells and photoreceptor cells in the macular area produces intra-retinal spaces in human cerebral malaria 107 suggests that these areas represent perivascular-space-like areas in the retina that support immunological events similar to those that occur in the perivascular spaces in deep brain areas. Furthermore, high-field MRI studies have identified damage to the optic and trigeminal nerves during experimental cerebral malaria even before the development of oedema, which may cause loss of visual acuity 112 . The olfactory bulb and cerebral malaria. The olfactory bulb is situated on the cribriform plate, located on top of the nasal sinus. Although the olfactory bulb has several characteristics that distinguish it from the brain, it is covered by similar meningeal structures and by the CSF and is thus included in the CNS. However, in contrast to other parts of the brain, olfactory nerves initiate from the nasal mucosa and terminate in the olfactory bulb through the cribriform plate, which is also the route of the blood vessels surrounding olfactory nerves. These olfactory nerves project any signals for odour to the olfactory bulb and to the brain. Inside the olfactory bulb, very dense blood capillaries are oriented in different directions (radially and tangentially) with thin astrocyte end-feet surrounding the vessels (FIG. 3c) . Owing to complex structural interactions of nerves through the cribriform plate, capillaries, microglia and astrocyte endfeet in this region, the olfactory organ is considered to be the gateway of the otherwise well-protected brain to the outside world. It is known that several molecules, cells and even pathogens can gain access to the brain parenchyma through this route 113 . By use of 11.7 T MRI in mice, it was discovered that the olfactory bulb is the first region during experimental cerebral malaria to show vascular leakage and bleeding 53 , a phenomenon possibly related to the unique small capillary trabecular structure of the olfactory bulb. This was also directly visualized and confirmed by intravital two-photon microscopy during cerebral malaria 53 . These dense and directionally structured olfactory blood capillaries 114 , which are thought to be leakier than those in the brain cortex or pons 115 , are a suitable scaffold for iRBCs 53 . Sequestration of iRBCs in the olfactory bulb capillaries results in astrocyte and microglia activation 53, 76, 98 and in the loss of tight junction integrity, and these parasite-mediated events lead to olfactory dysfunction and loss of smell, which could be a valuable early diagnostic marker for cerebral malaria. Moreover, astrocytes surrounding small trabecular capillaries in the olfactory bulb were found to sense changes in the vessels and secrete cytokines and chemokines, such as CC-chemokine ligand 21 (CCL21), which are involved in the accumulation of pathological CXCR3 + CD8 + T cells in the olfactory bulb 53 . Expression of CC-chemokine receptor 7 (CCR7), which is the canonical receptor for CCL21 and CCL19, was shown to be essential for antigen cross-presentation by CD8α + dendritic cells and for the activation of CXCR3 + CD8 + T cells in the spleen during cerebral malaria 53 . By contrast, CCL21 secreted from astrocytes played a role in the recruitment of pathological CXCR3 + CD8 + T cells in the olfactory bulb via its non-canonical receptor CXCR3 (REF. 53) . A pathological role for several chemokines and chemokine receptors (including CXCchemokine ligand 4 (CXCL4), CXCL10 and CXCR3) is well recognized in experimental cerebral malaria 116 , but the study discussed above 53 highlights how the specific role for chemokines in cerebral malaria might differ depending on the tissue and organ environment. Extended MRI studies using sensitive contrast reagents have further confirmed these findings and have shown that micro-haemorrhages originate in the olfactory Lacteals Small lymphatic capillaries located in the villi of the small intestine. Vessels with a structure similar to capillaries but that have larger diameters and porous endothelial cells, which allow for permeability and exchange of materials; they are located in bone marrow, liver and spleen. bulb together with oedema, but that the oedema further spreads along the rostral migratory stream, similar to the migration route of immune cells and neuroblasts 76 , and may reach the brainstem 98 . Moreover, the glymphatic system may play a key role in the rapid inflammatory spread of cerebral malaria from the olfactory bulb and rostral migratory stream axis to deeper brain areas such as perivascular spaces 76 . It is also possible that these events that occur in the olfactory bulb during cerebral malaria may block the drainage of CSF into nasal lymphatics and aggravate brain oedema (FIG. 3c) . Clearly, the role of the olfactory bulb in cerebral malaria in humans warrants further research. Tissue pathology within the gut Gastrointestinal symptoms such as abdominal pain, vomiting and diarrhoea are common symptoms during malaria infection. Autopsies of human patients who died from severe malaria have shown that sequestration of iRBCs occurs in the gastrointestinal tract (including in the colon, jejunum, ileum and stomach) 13 , suggesting that gastrointestinal bleeding occurs during malaria. The presence of Plasmodium DNA in faeces additionally supports the occurrence of intestinal bleeding during infection 117 ; however, how parasites interact with other cells in gut tissue is a research area that has only recently gained attention. Recent studies have confirmed that pathological changes (including detachment of epithelia and shortening of villi and the colon) occur in the intestinal tract during malaria 118 ; such changes may cause increased intestinal permeability, ruptures and leakage of infected erythrocytes into the lumen, causing dysbiosis of the intestinal microbiota, which may also contribute to disease severity 118 . Moreover, there is a close correlation between malaria infection and increased rates of infection with other gut pathogens (for example, nontyphoidal Salmonella and helminths), possibly owing to an impairment of intestinal barrier function during malaria [119] [120] [121] . Several factors may have a role in this, such as increased histamine release from mast cells in the gut 122 or the modulation of intestinal inflammation and immune responses via an increase in the number of exhausted neutrophils 45 or an increase in the levels of IL-10 family cytokines, including IL-10 and IL-22, in the intestinal tissues during malaria infection, as these factors may ameliorate responses to secondary bacterial infections [123] [124] [125] . However, it should be kept in mind that the composition of the gut microbiota has a clear impact on the severity of malaria disease [126] [127] [128] , suggesting that there is a bidirectional relation between the gut and Plasmodium parasites that is not well understood and requires further investigation. Nevertheless, a close look at the intestinal tissues may give some clues for understanding gut-Plasmodium interactions (FIG. 4a) . The blood capillaries carrying iRBCs reach the lamina propria of the intestinal mucosa and possibly come into close proximity with lacteals, which are specialized lymphatic vessels of intestinal villi that play a key role in nutrient absorption and in gut immune responses, such as the transport of microbial antigens and APCs to the mesenteric lymph nodes, where antigen presentation by APCs promotes the induction of T cells with gut-homing properties 129 . There is a gut-vascular barrier comprising endothelial cells, enteric pericytes and enteric glial cells that is very similar to the barriers found in other parts of the body (such as the BBB) and that actively blocks bacterial dissemination from the gut epithelium to the blood 130 . Therefore, it is reasonable to hypothesize that intestinal bleeding may occur as a result of malaria-mediated immune responses that directly affect lacteals. It is possible that lacteals with disturbed remodelling have impaired survival and villi length 118 , and this may have knock-on effects on immune cell composition and on the microbiota of the gut tissue. Tissue pathology within bone Bone tissue is a mineralized connective tissue supporting the whole body and it houses the bone marrow, which comprises specialized niches that maintain and regulate haematopoiesis, erythropoiesis and bone remodelling (FIG. 4b) . Arteries in the bone marrow unite and become specialized vessels called bone marrow sinusoids, which allow cells to pass between the circulation and bone marrow 131 . Without any cyto adherence, Plasmodium parasites can invade and multiply in nucleated erythroblasts located in extravascular spaces of the bone marrow [132] [133] [134] . The parasites can survive and hide in these erythroid precursors and develop into gametocyte stages [135] [136] [137] , likely assisting in the continuous success of malaria transmission to mosquitoes. However, it is still not known why Plasmodium parasites preferentially differentiate into gametocytes in the bone marrow and whether a specific bone marrow niche is required to support the development of gametocytes. Unlike haematopoietic niches, which are located adjacent to sinusoids, erythroid niches are found throughout the bone marrow and are generally located away from the sinusoids, although they move closer to the sinusoids as they mature 138 . This may suggest a major role for the erythroid niche in Plasmodium gametocyte development. From an immunological point of view, it has recently been shown that CD8 + T cells produce IFNγ in response to infected MHC class I-expressing erythroblasts residing in the bone marrow; by contrast, mature erythrocytes residing in the blood circulation lack any MHC molecules and cannot present antigens to CD8 + T cells 132, 139 . Activated CD8 + T cells promote the exposure of phosphatidylserine on infected erythro blasts, and this enhances the susceptibility of the infected cells to phagocytosis by macrophages 132 , suggesting a protective role of CD8 + T cells against malaria. However, whether bone marrow erythroid cells contribute to the expansion of pathological populations of CD8 + T cells that can drive cerebral malaria has not been investigated. Despite the growing body of information on how bone marrow niches are manipulated by Plasmodium parasites, very little is known about the potential outcomes of interactions between Plasmodium parasites and bone tissue. In bone marrow, haematopoietic stem cells give rise to blood cells and bone-resident osteoclasts, whereas mesenchymal stem cells give rise to osteoblasts, adipocytes and stromal cells. A very recent study has suggested that during Plasmodium infection, parasites and their products -mainly haemozoin -continuously accumulate in bone marrow and cause acute as well as chronic bone loss 27 . Although it is not precisely known how Plasmodium products are retained long term in the bone marrow, it is possible that engulfment by macrophages or other phagocytic cells, such as bone-resident osteoclasts, or trapping by extracellular matrix in the bone marrow contributes to this phenomenon 27 . Chronic bone loss during malaria infection is mediated by over-activation of osteoclast resorption activity. The osteoclasts are activated by the key osteoclastogenic cytokine RANKL (also known as TNFSF11), which is upregulated in osteoblasts through MYD88-dependent signalling triggered by the persistence of parasite products in the bone marrow 27 . These findings highlight how, not only during acute malaria infection but also after recovery from infection, Plasmodium products continue to interact with tissueresident cells, including bone cells, osteoclasts and osteoblasts, and how they can cause long-term effects in the host, such as bone loss and growth problems. The molecular and immunological pathways underlying the interaction between Plasmodium spp. and the niches of various bone marrow cells and the effect of these interactions on the immune system 140, 141 need to be addressed in the future. Malaria is a serious disease with acute life-threatening and long-term complications, all of which can be attributed to local but specific organs in which Plasmodium Figure 4 | Infected red blood cells in gut and bone marrow niches. a | The intestinal tract is made up of several tissue layers. The villous mucosa is covered by mucus that is secreted by the goblet cells of the epithelium. It lies on a connective tissue, the lamina propria, which is an environment rich in blood vessels, lymphatics, nerves and immune cells. It also contains Peyer's patches and is lined by smooth muscle tissue (muscularis mucosa). Blood capillaries that are carrying infected red blood cells (iRBCs) reach the lamina propria of the intestinal tract and can come into close proximity with lacteals at this location. b | Bone tissue supports the whole body and is home to bone cells, blood vessels, nerves and endothelium, as well as containing the bone marrow niches. The bone marrow is composed of haematopoetic and mesenchymal stem cells that are involved in both haematopoiesis and bone remodelling, such as osteoclasts and osteoblasts. Cells and iRBCs pass through the circulation and bone marrow via specialized venules called bone marrow sinusoids. Plasmodium parasites can invade erythroblasts, the erythrocyte precursors, and preferentially form gametocytes in the bone marrow erythroblastic niche. Released Plasmodium products including haemozoin can be engulfed by osteoclasts and activate osteoblasts and osteoclast precursors. HSC, haematopoietic stem cell; MSC, mesenchymal stem cell; OSB, osteoblast. Haemozoin A unique by-product of Plasmodium parasites that accumulates in several organs, including spleen, liver and bone marrow, even after the infection resolves. parasites and their products or iRBCs interact with the tissue, causing an imbalance in the specific tissue environ ment. Here, we have attempted to summarize the recent progress of research focusing on the tissue environment in a few example organs, such as the brain, gut and bone, where Plasmodium parasites reach the tissue via the blood. However, the lungs 142 , kidneys 143 and placenta 144 represent other organs that are seriously affected during malaria infection, and these tissues should also be examined more closely in future studies. Here, our aim has been to show that the influence of malarial parasites reaches beyond erythrocytes and may vary depending on, and be tightly regulated by, the vessel-specific and/or tissue-specific microenvironment. On the basis of the available data, we suggest that the brain pathology caused by Plasmodium parasites is not homogeneously controlled by parasite sequestration but is rather controlled by the local, specific and unique anatomical structure of vessels, parenchyma and lymphatics, which closely interact with each other during both homeostasis and infection. This concept is in accordance with the recent understanding that the vascular and epithelial barriers do cooperate in an organ-specific manner in homeostatic and diseased conditions 130 . We additionally emphasize that parasite-derived products can continue to stay in the body, interact with tissues and cause chronic pathologies even long after recovery from infection, particularly in the case of bone tissue. The gut pathology caused by malaria, which has recently been recognized, was summarized, and the possible anatomical interaction between blood tissues and special gut lymphatics has been introduced. There are multiple benefits of understanding malaria-related pathologies in various tissues. For instance, understanding the reaction of microglia and astrocytes to iRBCs will be beneficial for generating intervention strategies that block these interactions to prevent cerebral malaria and/or related long-term sequelae. Supporting the gut microbiota during and after Plasmodium infection might help to protect against and promote recovery from secondary infections. Similarly, additional therapies like vitamin D 3 supplementation to support the bone environment affected during and after malaria might help the growth of children or support bone health in elderly people. The search for a full understanding of malaria-related pathologies is important for ensuring that malaria is one day a curable and/or preventable disease. Towards this goal, novel approaches should be investigated to analyse unknown or overlooked anatomical -as well as immunological -host-parasite interactions at various tissue levels of each organ, not only during infection but also long after clearance of the initial infection by the parasite. By doing so, we will be able to prevent the disease, diagnose and treat patients, predict prognoses and allow patients to receive appropriate medical care through the use of effective vaccines, diagnostic tools, adjunct therapies and antimalarials in a cost-effective and timely manner in the near future. 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C.C. wrote the manuscript; all authors contributed to researching data, discussing the content and reviewing and editing the manuscript. The authors declare no competing interests. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.