key: cord-0026207-wm39lgt4
authors: Girich, Elena V.; Rasin, Anton B.; Popov, Roman S.; Yurchenko, Ekaterina A.; Chingizova, Ekaterina A.; Trinh, Phan Thi Hoai; Ngoc, Ngo Thi Duy; Pivkin, Mikhail V.; Zhuravleva, Olesya I.; Yurchenko, Anton N.
title: New Tripeptide Derivatives Asperripeptides A–C from Vietnamese Mangrove-Derived Fungus Aspergillus terreus LM.5.2
date: 2022-01-17
journal: Mar Drugs
DOI: 10.3390/md20010077
sha: dab5de4272107988ed67b2b0eeab9223ad4be241
doc_id: 26207
cord_uid: wm39lgt4

Three new tripeptide derivatives asterripeptides A–C (1–3) were isolated from Vietnamese mangrove-derived fungus Aspergillus terreus LM.5.2. Structures of isolated compounds were determined by a combination of NMR and ESIMS techniques. The absolute configurations of all stereocenters were determined using the Murfey’s method. The isolated compounds 1–3 contain a rare fungi cinnamic acid residue. The cytotoxicity of isolated compounds against several cancer cell lines and inhibition ability of sortase A from Staphylococcus aureus of asterripeptides A–C were investigated.

The genus Aspergillus is a group of filamentous fungi, which today consists of more than 250 species. Moreover, this genus has been subdivided into several subgenera and sections based on morphology and genetics, such as subgenera Nidulantes, Circumdati, Fumigati, Terrei, Candidi, and so on. The section Terrei includes Aspergillus terreus along with its varieties, as well as A. niveus, A. carneus, A. niveus var. indicus, A. allahabadii, A. ambiguous, and A. microcysticus [1] . Fungi of the section Terrei are mainly characterized by the several metabolite classes such as butenolides [2] and other polyketides [3, 4] , sesquiterpenoids [5] [6] [7] , meroterpenoids [8] , and bisindolebenzoquinone alkaloids [9] .

Aspergillus terreus is a cosmopolite species with high biotechnological potential [10] . For instance, A. terreus NIH2624 contains 28 polyketide synthase (PKS) genes, 22 nonribosomal peptide synthetase (NRPS) genes, 1 hybrid PKS/NRPS gene, 2 PKS-like genes, and 15 NRPS-like genes [11] . Owing to the diversity of such synthase gene clusters, A. terreus produces a huge amount of secondary metabolites with very large structural variety. Marine environments have an additional effect on the structural features of A. terreus bioactive metabolites. Marine-derived A. terreus strains were described as producers of butyrolactones with anti-allergic, anti-inflammatory, and antiviral activities [2, 12] , an unusual antimicrobial N-phenyl-carbamic acid trimer [13] and a cytotoxic tetrapeptide [14] .

Peptide derivatives are a very rare type of A. terreus metabolite [14, 15] . Overall, lowweight marine fungal peptides are not as widespread as alkaloids, polyketides, and terpenoids, but they undoubtedly have pharmaceutical potential, thanks to their structural peculiarities and wide bioactivity spectrum [16] . Peptides of marine microorganisms, including fungi, can be biosynthetically produced by ribosomal and non-ribosomal peptidesynthase action, which can explain the presence of unique structural features, such as Damino acids, N-terminally attached fatty acid chains, N-and C-methylated residues, Nformylated residues, heterocyclic elements, and glycosylated amino acids, as well as phosphorylated residues, among others [17] . For example, peptaibols-antibiotic active peptide-derivative compounds produced mainly by fungal species of the genus Trichoderma [18] . Moreover, there are cytotoxic, antiviral, antidiabetic, and anti-inflammatory peptides originating from marine fungi [19] .

Previously, we reported a number of alkaloids, polyketides, and terpenoids from a Vietnamese mangrove-derived strain of Aspergillus terreus LM.5.2 [20] .

Herein, we described the isolation and structural elucidation of three peptide-derivative secondary metabolites (Figure 1 ) of the same Aspergillus terreus LM.5.2 strain. Moreover, their cytotoxic activity against a number of malignant human cancer cells and nonmalignant rat cardiomyocytes H9c2 cells, as well as inhibition of sortase A enzyme from Staphylococcus aureus, were investigated. 

The molecular formula of 1 was determined as C29H33N3O4 by the HRESIMS peak [M -H] − at m/z 486.2399 ( Figure S8 , Supplementary Material), which was confirmed by the 13 C NMR data. A thorough inspection of the 1 H and 13 C NMR data ( 

The molecular formula of 1 was determined as C 29 H 33 N 3 O 4 by the HRESIMS peak [M − H] − at m/z 486.2399 ( Figure S8 , Supplementary Material), which was confirmed by the 13 C NMR data. A thorough inspection of the 1 H and 13 C NMR data ( Detailed analysis of the HMBC and 1 H-1 H COSY and ROESY spectra ( Figure 2 , Figures S4-S7 , Supplementary Material) led to the identification of three amino acid residues, including isoleucine (Ile), proline (Pro), and phenylalanine (Phe). The HMBC correlations (Figure 2a ) from H-1 (δ H 5.57) to C-24 (δ C 58.2) and C-32 (δ C 168.2), from H-2 (δ H 2.54) to C-32, and from H-24 (δ H 5.57) to C-7 indicated the presence of a diketopiperazine ring formed from residues of isoleucine and phenylalanine. The HMBC correlations (Figure 2a ) from H-16 (δ H 6.73) to C-15 (δ C 164.6), C-17 (δ C 142.8), and C-18 (δ C 135.1); from H-17 (δ H 6.73) to C-16 (δ C 117.9), C-18, and C-19 (δ C 127.9); from H-19 (δ H 7.51) to C-17, C-21 (δ C 129.7), and C-23(δ C 127.9); from H-20 (δ H 7.36) to C-22 (δ C 128.8) and C-18; Figure S8 , Supplementary Material). This moiety was bound to the proline residue through the carboxyl group of the former and the amino group of the latter, as the ROESY spectrum contained correlations between H-13a (δ H 3.93) and H-16 (δ H 6.73), H-13b (δ H 3.79), and H-16, as well as between H-13a/b and H-17 (δ H 7.66). Thus, the planar structure of compound 1 was determined. The absolute configurations of all stereocenters in 1 were established by Marfey's method [21] . Analysis of L-FDAA derivatives of amino acid residues obtained by acid hydrolysis of compound 1 showed them to be derivatives of L-Ile, L-Pro, and D-Phe standard samples ( Figures S25-S28 , Supplementary Material). Thus, the configurations of chiral centers at C-2, C-10, and C-24 were determined as 2S, 10S, and 24R, respectively. Compound 1 was named asterripeptide A.

The molecular formula of 2 was suggested as C 29 H 33 N 3 O 4 by the HRESIMS data (the [M + Na] + peak at m/z 439.2367 ( Figure S16 , Supplementary Material)) and was confirmed by 13 C NMR spectra ( Figure S10 , Supplementary Material).

A detailed 1 H and 13 C NMR data comparison of 1 and 2 revealed a very close similarity with the exception of the signals in diketopiperazine moiety, namely C-3 (δ C 40.7), C-4 (δ C 24.4), C-5 (δ C 23.1), and C-6 (δ C 20.7), and a splitting pattern of the protons on these carbons ( Table 2 , Figures S9-S11, Supplementary Material). These data, along with HMBC correlations (Figure 3a , Figure S13 , Supplementary Material) from H-4 (δ H 2.07) to C-2 (δ C 52.6) and C-3, from H-5 (δ H 0.88) to C-2 and C-3, as well as from H-6 (δ H 0.70) to C-3, suggest the presence of leucine residue (Leu) in the diketopiperazine ring of 2, instead of Ile in 1. Thus, compound 2 was determined to be an isomer of 1. The absolute configurations of all stereocenters in 1 were established by Marfey's method [21] . Analysis of L-FDAA derivatives of amino acid residues obtained by acid hydrolysis of compound 1 showed them to be derivatives of L-Ile, L-Pro, and D-Phe standard samples ( Figures S25-S28 , Supplementary Material). Thus, the configurations of chiral centers at C-2, C-10, and C-24 were determined as 2S, 10S, and 24R, respectively. Compound 1 was named asterripeptide A.

The molecular formula of 2 was suggested as C29H33N3O4 by the HRESIMS data (the [M + Na] + peak at m/z 439.2367 ( Figure S16 , Supplementary Material)) and was confirmed by 13 C NMR spectra ( Figure S10 , Supplementary Material).

A detailed 1 H and 13 C NMR data comparison of 1 and 2 revealed a very close similarity with the exception of the signals in diketopiperazine moiety, namely C-3 (δC 40.7), C-4 (δC 24.4), C-5 (δC 23.1), and C-6 (δC 20.7), and a splitting pattern of the protons on these carbons ( Table 2 , Figures S9-S11, Supplementary Material). These data, along with HMBC correlations (Figure 3a, Figure S13 , Supplementary Material) from H-4 (δH 2.07) to C-2 (δC 52.6) and C-3, from H-5 (δH 0.88) to C-2 and C-3, as well as from H-6 (δH 0.70) to C-3, suggest the presence of leucine residue (Leu) in the diketopiperazine ring of 2, instead of Ile in 1. Thus, compound 2 was determined to be an isomer of 1. The absolute configurations of all stereocenters in 2 were established by Marfey's method [21] . Analysis of L-FDAA derivatives of amino acid residues obtained by acid hydrolysis of compound 2 showed them to be derivatives of L-Leu, L-Pro, and D-Phe standard samples ( Figures S29-S32 , Supplementary Material). Thus, the configurations of chiral centers at C-2, C-10, and C-24 were determined to be 2S, 10S, and 24R respectively. Compound 2 was named asterripeptide B.

The The absolute configurations of all stereocenters in 2 were established by Marfey's method [21] . Analysis of L-FDAA derivatives of amino acid residues obtained by acid hydrolysis of compound 2 showed them to be derivatives of L-Leu, L-Pro, and D-Phe standard samples ( Figures S29-S32, Supplementary Material) . Thus, the configurations of chiral centers at C-2, C-10, and C-24 were determined to be 2S, 10S, and 24R respectively. The absolute configurations of all stereocenters in 3 were established in the same way as in compounds 1 and 2, by Marfey's method. An analysis of L-FDAA derivatives of amino acid residues obtained by acid hydrolysis of compound 3 showed them to be derivatives of L-Val, L-Pro, and D-Phe standard samples ( Figures S33-S36, Supplementary Material) . Thereby, the configurations of chiral centers at C-2, C-10, and C-24 were determined to be 2S, 10S, and 24R, respectively. Compound 3 was named asterripeptide C.

It should be noted that cinnamic acid and its derivatives are widespread among plant metabolites [22, 23] . However, these compounds were never reported as fragments of any fungal metabolites. Thus, this is the very first report of cinnamic acid containing compounds from marine microfilamentous fungus. We suggest that cinnamic acid was produced in the fungus from phenylalanine via phenylalanine-ammonia-lyase enzyme action, similar to its biosynthesis in plants [24] . A similar enzyme was earlier reported for Aspergillus orizae [25] . 

The cytotoxic activities of isolated compounds 1-3 are presented in Table 4 . Each one showed a weak cytotoxic activity toward non-malignant cardiomyocyte H9c2 cells as well as human colorectal DLD-1 and breast cancer MCF-7 cells. The cytotoxic effect of compounds 1-3 against human prostate cancer PC-3 cells was not great either, but it was observed at lesser concentrations. Asterripeptide A (1) half-maximal decreased the viability of MCF-7 and DLD-1 cells at 96.8 and 87.7 µM, respectively, whereas it decreased the viability of PC-3 cells at the concentration of 64.6 µM. Asterripeptide B (2) half-maximally decreased the viability of MCF-7 and DLD-1 cells at a concentration larger than 100 µM, whereas it decreased the viability of PC-3 cells at the concentration of 75.5 µM. Finally, asterripeptide C (3) decreased the viability of MCF-7 and DLD-1 cells by 50% at 96.6 and 84.9 µM, respectively, whereas it decreased the viability of PC-3 cells at the concentration of 58.3 µM. Thus, cytotoxicity of asterripeptides A-C (1-3) was not great, but some selectivity of these compounds for prostate cancer cells may be of particular interest.

To determine antibacterial properties, the possibility of isolated compounds inhibiting enzymatic activity of the sortase A was investigated. The membrane-associated sortase A enzyme (EC 3.4.22.70) is one of the key enzymes for Staphylococcus aureus virulence, and its inhibitors are considered as potential anti-bacterial agents [26] . Thus, asterripeptides B (2) and C (3) inhibited sortase A activity by more than 20% at the concentration of 80 µM and asterripeptide A (1) was inactive in this assay ( Figure 5 ). Earlier bicyclic peptides with Leu-Pro-Pro motive were identified as potent and selective inhibitors of sortase A via binding to the enzyme's active site, owing to structural mimicking of the Leu-Pro-Xaa-Thr-Gly region of natural substrate of sortase A [27] . Presumably, the presence of the terminal ethyl group in isoLeu is the main reason for the inactivity of asterripeptide A, and the Leu-Pro fragment in the structure of asterripeptide B (2) as well as the Val-Pro region in the structure of asterripeptide C (3) play a role in their sortase A inhibitory effect. Thus, asterripeptides B and C are worthy of note as promising anti-Staphylococcal agents, and their antibacterial activity will be investigated in detail in the future.

NMR spectra were recorded in CDCl3 on a Bruker DPX-500 (Bruker BioSpin GmbH, Rheinstetten, Germany) and a Bruker DRX-700 (Bruker BioSpin GmbH, Rheinstetten, Germany) spectrometer, using TMS as an internal standard. HRESIMS spectra were measured on a Maxis Impact mass spectrometer (Bruker Daltonics GmbH, Rheinstetten, Germany).

Low-pressure liquid column chromatography was performed using silica gel (50/100 µm, Imid Ltd., Krasnodar, Russia). Plates (4.5 cm × 6.0 cm) precoated with silica gel (5-17 µm, Imid Ltd.) were used for thin-layer chromatography. Preparative HPLC was carried out on a Shimadzu LC-20 chromatograph (Shimadzu USA Manufacturing, Canby, OR, USA) using a YMC ODS-AM (YMC Co., Ishikawa, Japan) (5 µm, 10 mm × 250 mm) and Earlier bicyclic peptides with Leu-Pro-Pro motive were identified as potent and selective inhibitors of sortase A via binding to the enzyme's active site, owing to structural mimicking of the Leu-Pro-Xaa-Thr-Gly region of natural substrate of sortase A [27] . Presumably, the presence of the terminal ethyl group in isoLeu is the main reason for the inactivity of asterripeptide A, and the Leu-Pro fragment in the structure of asterripeptide B (2) as well as the Val-Pro region in the structure of asterripeptide C (3) play a role in their sortase A inhibitory effect. Thus, asterripeptides B and C are worthy of note as promising anti-Staphylococcal agents, and their antibacterial activity will be investigated in detail in the future.

NMR spectra were recorded in CDCl 3 on a Bruker DPX-500 (Bruker BioSpin GmbH, Rheinstetten, Germany) and a Bruker DRX-700 (Bruker BioSpin GmbH, Rheinstetten, Germany) spectrometer, using TMS as an internal standard. HRESIMS spectra were measured on a Maxis Impact mass spectrometer (Bruker Daltonics GmbH, Rheinstetten, Germany).

Low-pressure liquid column chromatography was performed using silica gel (50/100 µm, Imid Ltd., Krasnodar, Russia). Plates (4.5 cm × 6.0 cm) precoated with silica gel (5-17 µm, Imid Ltd.) were used for thin-layer chromatography. Preparative HPLC was carried out on a Shimadzu LC-20 chromatograph (Shimadzu USA Manufacturing, Canby, OR, USA) using a YMC ODS-AM (YMC Co., Ishikawa, Japan) (5 µm, 10 mm × 250 mm) and YMC SIL (YMC Co., Ishikawa, Japan) (5 µm, 10 mm × 250 mm) columns with a Shimadzu RID-20A refractometer (Shimadzu Corporation, Kyoto, Japan). Analysis of amino acids' stereo configurations was performed on an Agilent 1100 chromatograph using YMC C-18 Pro column (YMC Co., Ishikawa, Japan) (5 µm, 4.6 mm × 250 mm).

The strain was isolated from mangrove tree leaves Kandelia candel (coast of Khanh Hoa province, Vietnam, South China Sea) on malt extract agar, and identified based on morphological and molecular features. For DNA extraction, the culture was grown on malt extract agar under 28 • C for 7 days. DNA extraction was performed with the HiPurA TM Plant DNA Isolation kit (CTAB Method) (HiMedia Laboratories Pvt. Ltd., Mumbai, India) according to the manufacturer's instructions. Fragments containing the ITS regions were amplified using ITS1 and ITS4 primers. The newly obtained sequences were checked visually and compared to available sequences in the GenBank database (https://www.ncbi. nlm.nih.gov/genbank, accessed on 16 December 2021). According to BLAST analysis of the ITS1-5.8S-ITS2 sequence, the strain LM.1.5 had 98.06% similarity with Aspergillus terreus DTO 403-C9 (sequence number in GenBank database-MT316343.1). The sequences were deposited in the GenBank nucleotide sequence database under MN788658.1.

The fungus was cultured at 28 • C for three weeks in 40 × 500 mL Erlenmeyer flasks, each containing rice (20.0 g), yeast extract (20.0 mg), KH 2 PO 4 (10 mg), and natural sea water (40 mL).

The fungal mycelia with the medium were extracted for 24 h with 12 L of EtOAc. Evaporation of the solvent under reduced pressure gave a dark red-brown oil (6.50 g), to which 250 mL H 2 O-EtOH (4:1) was added, and the mixture was thoroughly stirred to yield a suspension. It was extracted successively with hexane (100 mL × 3), EtOAc (150 mL × 3), and n-BuOH (150 mL × 2). After evaporation of the EtOAc layer, the residual material (4.00 g) was passed through a silica gel column (11 cm × 4 cm, 75 g), which was eluted first with n-hexane (1.0 L), followed by a step gradient from 5% to 100% EtOAc in n-hexane (total volume 25 L). Fractions of 250 mL each were collected and combined based on the TLC results (silica gel and toluene-2-propanol, 6:1 and 3:1, v/v).

The AT-1-40 (470.08 mg) fraction eluted by the n-hexan-EtOAc system (85:15) was separated by an LH-20 column (80 cm × 2 cm, 50 g) with CHCI 3 to yield subfraction AT-27-1 (50.62 mg). Subfraction AT-27-1 was purified by HPLC on a YMC-SIL column, eluting with n-hexan-EtOAc (50:50) to yield compounds 1 (7.94 mg) and 2 (4.63 mg). The AT-101-69 (154 mg) fraction eluted by n-hexan-EtOAc system (75:25) was separated by LH-20 column (80 cm × 2 cm, 50 g) with CHCI 3 to yield subfraction AT-103- 13 

The compounds (0.2 mg each) were placed in glass ampoules and dissolved in 6N HCl (0.4 mL). Solutions in ampoules were frozen in liquid nitrogen, then vacuumed, sealed, and heated at 105 • C for 24 h. Then, the cooled reaction mixture was diluted by distilled water and concentrated in vacuo [21] . The obtained hydrolysates of compounds 1-3 and standard amino acids of the Land D-configurations (0.2 mg each) were dissolved in 0.1 mL of distilled water, then 0.4 mL of 1M NaHCO 3 and 0.2 mL of a 1% solution of Marfey's reagent in acetone were added. The reaction mixtures were kept at 37 • C for 75 min and 0.05 mL of 1M HCl was added. Then, obtained L-FDDA derivatives were analyzed by HPLC-UV in gradient of MeCN-H 2 O from 25:75 to 65:35 over 40 min at 20 • C using YMC C-18 Pro column.

The enzymatic activity of sortase A from Staphylococcus aureus was determined using SensoLyte 520 Sortase A Activity Assay Kit * Fluorimetric * (AnaSpec AS-72229, AnaSpec, San Jose, CA, USA) in accordance with the manufacturer's instructions. DMSO at a concentration of 0.8% was used as a control. Fluorescence was measured with the plate reader PHERAStar FS (BMG Labtech, Offenburg, Germany) for 60 min with a time interval of 5 min. The data were processed by MARS Data Analysis v. 3.01R2 (BMG Labtech, Offen-burg, Germany). The results were presented as relative fluorescent units (RFUs) and percentage of the control data [28] .

The human prostate cancer PC-3, human breast cancer MCF-7, and human colorectal cancer DLD-1 cells were purchased from ATCC. The rat cardiomyocytes H9c2 line cells were kindly provided by Prof. Dr. Gunhild von Amsberg from Martini-Klinik Prostate Cancer Center, University Hospital Hamburg-Eppendorf, Hamburg, Germany. The cells were cultured in DMEM medium (Biolot, St. Petersburg, Russia) containing 10% fetal bovine serum (Biolot, St. Petersburg, Russia) and 1% penicillin/streptomycin (Invitrogen, Carlsbad, CA, USA) at 37 • C in a humidified atmosphere with 5% (v/v) CO 2 . Initially, cells were incubated in cultural flasks until sub-confluent (~80%). For testing, the cells were seeded at concentrations of 5 × 10 3 cells/well (MCF-7, DLD-1, and PC-3 cells) or 1 × 10 3 cells/well (H9c2 cells), and experiments were started after 24 h (MCF-7, DLD-1, and PC-3 cells) or 48 h (H9c2 cells).

The in vitro cytotoxicity of individual substances was determined by the MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) method, according to the manufacturer's instructions (Sigma-Aldrich, St. Louis, MO, USA).

Investigated compounds were dissolved in DMSO at a concentration of 10 mM. This solution was used to obtain the required concentration of compounds in the cell suspension, so that the concentration of DMSO in the cell suspension would not exceed 1%.

The cells were treated with the investigated compounds for 24 h, and MTT reagent was added to each well of the plate. The vehicle with DMSO at the concentration of 1% was used as a control. The absorbance of formed formazan was measured at λ = 570 nm, using a Multiskan FC microplate photometer (Thermo Scientific, Waltham, MA, USA) and expressed in optical units (o.u.). The results were calculated as % of viable cells to vehicle data.

All results were given as a mean ± standard error of the mean (SEM). General statistical analysis was performed using Student's t-test, employed with the aid of SigmaPlot 14.0 (Systat Software Inc., San Jose, CA, USA). Differences were considered statistically significant at p < 0.05.

The following supporting information can be downloaded at: https: //www.mdpi.com/article/10.3390/md20010077/s1, Figures S1-S7, S9-S15 and S17-S23: NMR spectra of compounds 1-3; Figures S8, S16 and S24: MS data for compounds 1-3; Figures 

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The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript; or in the decision to publish the results.