This is a table of type trigram and their frequencies. Use it to search & browse the list to learn more about your study carrel.
trigram | frequency |
---|---|
the number of | 547 |
as well as | 514 |
the presence of | 479 |
in order to | 470 |
based on the | 366 |
one of the | 360 |
genome sequence of | 258 |
the development of | 255 |
the use of | 227 |
of the protein | 227 |
sequence of the | 220 |
analysis of the | 211 |
in this study | 211 |
can be used | 191 |
due to the | 188 |
a number of | 187 |
structure of the | 181 |
amino acid sequence | 177 |
a variety of | 176 |
it has been | 161 |
the synthesis of | 161 |
in the presence | 160 |
the amino acid | 155 |
a set of | 154 |
be used to | 152 |
in addition to | 149 |
part of the | 149 |
found to be | 146 |
the formation of | 145 |
of amino acids | 144 |
the human genome | 143 |
of dna sequences | 143 |
the role of | 142 |
in terms of | 134 |
each of the | 134 |
according to the | 133 |
involved in the | 133 |
of the human | 131 |
hepatitis c virus | 129 |
of a novel | 128 |
of the sequences | 127 |
the effect of | 127 |
that can be | 126 |
the structure of | 125 |
the case of | 125 |
such as the | 125 |
on the other | 123 |
a series of | 123 |
the other hand | 118 |
complete genome sequence | 116 |
in the case | 115 |
well as the | 115 |
to determine the | 115 |
large number of | 111 |
was used to | 111 |
graphical representation of | 111 |
some of the | 110 |
sequences of the | 109 |
of the most | 109 |
the sequence of | 108 |
in the present | 108 |
the analysis of | 108 |
amino acid sequences | 108 |
of the two | 106 |
of the genome | 106 |
in this work | 106 |
role in the | 105 |
of protein sequences | 104 |
the identification of | 104 |
there is a | 104 |
sequences in the | 103 |
most of the | 102 |
has been shown | 101 |
amino acid residues | 101 |
a total of | 100 |
of the sequence | 100 |
the present study | 100 |
been shown to | 99 |
found in the | 99 |
to that of | 99 |
d graphical representation | 99 |
the design of | 99 |
compared to the | 99 |
the results of | 98 |
present in the | 97 |
shown to be | 97 |
the absence of | 97 |
of the virus | 97 |
region of the | 97 |
to be a | 96 |
is based on | 95 |
with respect to | 95 |
of the peptide | 95 |
was found to | 94 |
used in the | 94 |
the fact that | 94 |
the importance of | 94 |
of a protein | 92 |
of amino acid | 92 |
as a result | 92 |
based on a | 91 |
end of the | 91 |
the effects of | 91 |
severe acute respiratory | 90 |
multiple sequence alignment | 89 |
acute respiratory syndrome | 89 |
is one of | 89 |
the ability to | 88 |
in the sequence | 87 |
associated with the | 87 |
in which the | 87 |
have shown that | 87 |
members of the | 85 |
a large number | 85 |
the active site | 84 |
in the same | 84 |
of the viral | 83 |
to investigate the | 83 |
the evolution of | 82 |
showed that the | 81 |
the expression of | 81 |
the mechanism of | 81 |
related to the | 79 |
to identify the | 78 |
the size of | 77 |
we found that | 77 |
understanding of the | 76 |
sequences based on | 76 |
to study the | 76 |
of hepatitis c | 76 |
and in the | 76 |
that of the | 75 |
of the same | 75 |
were found to | 75 |
nucleotide sequence of | 74 |
an important role | 74 |
a and b | 74 |
be used for | 74 |
changes in the | 74 |
the aim of | 73 |
the process of | 73 |
the basis of | 73 |
show that the | 73 |
of the three | 72 |
as shown in | 72 |
the production of | 72 |
the activity of | 72 |
it is possible | 71 |
the end of | 71 |
the discovery of | 71 |
properties of the | 71 |
the length of | 71 |
a combination of | 71 |
there is no | 70 |
of the first | 70 |
the detection of | 70 |
in this paper | 70 |
characterization of the | 69 |
the distribution of | 69 |
are involved in | 69 |
was carried out | 69 |
activity of the | 69 |
the set of | 68 |
in the absence | 68 |
the function of | 68 |
the sequences of | 68 |
sequence of a | 68 |
because of the | 68 |
suggest that the | 67 |
for the development | 67 |
the ability of | 67 |
function of the | 67 |
were used to | 67 |
representation of dna | 67 |
the study of | 66 |
derived from the | 66 |
number of sequences | 66 |
between the two | 65 |
size of the | 65 |
were able to | 65 |
important role in | 64 |
the application of | 64 |
the amount of | 64 |
responsible for the | 64 |
the rate of | 63 |
be involved in | 63 |
shown in fig | 63 |
known to be | 62 |
the genome of | 62 |
can be found | 62 |
similar to that | 62 |
revealed that the | 62 |
the binding of | 62 |
used as a | 62 |
of the p | 62 |
it can be | 62 |
length of the | 61 |
is used to | 61 |
on the basis | 61 |
the surface of | 61 |
the level of | 61 |
used for the | 61 |
all of the | 61 |
have been developed | 61 |
and characterization of | 61 |
to understand the | 60 |
genome sequences of | 60 |
parts of the | 60 |
the existence of | 60 |
are able to | 60 |
corresponding to the | 60 |
depending on the | 59 |
seems to be | 59 |
need to be | 59 |
of a new | 59 |
it is not | 59 |
member of the | 58 |
that have been | 58 |
the majority of | 58 |
wide range of | 58 |
of this study | 58 |
by means of | 58 |
the treatment of | 58 |
it is a | 58 |
on the surface | 57 |
in contrast to | 57 |
have been identified | 57 |
nature of the | 57 |
is shown in | 57 |
is the most | 57 |
identification of a | 57 |
in the first | 56 |
information about the | 56 |
phase peptide synthesis | 56 |
consistent with the | 56 |
the interaction of | 56 |
evolution of the | 56 |
we show that | 55 |
a range of | 55 |
results suggest that | 55 |
of the n | 55 |
representation of protein | 55 |
can also be | 55 |
at the same | 55 |
the phylogenetic tree | 55 |
expression of the | 54 |
have been used | 54 |
shown in figure | 54 |
the accuracy of | 54 |
in the database | 54 |
a role in | 53 |
of the proteins | 53 |
in the human | 53 |
presence of a | 53 |
the range of | 53 |
to be the | 53 |
are known to | 53 |
a wide range | 53 |
will be discussed | 53 |
the secondary structure | 52 |
we report the | 52 |
which is a | 52 |
as compared to | 52 |
results show that | 52 |
the degree of | 52 |
and it is | 52 |
open reading frames | 52 |
which is the | 51 |
and analysis of | 51 |
the fi rst | 51 |
the nature of | 51 |
some of these | 51 |
found that the | 50 |
was supported by | 50 |
the possibility of | 50 |
of a sequence | 50 |
is involved in | 50 |
which can be | 50 |
referred to as | 50 |
sequences can be | 50 |
of the sars | 50 |
a group of | 50 |
comparison of the | 50 |
located in the | 49 |
shown that the | 49 |
phylogenetic analysis of | 49 |
crystal structure of | 49 |
role of the | 49 |
could be used | 49 |
respiratory syndrome coronavirus | 49 |
is able to | 49 |
the regulation of | 49 |
closely related to | 49 |
in the protein | 48 |
x and y | 48 |
was used as | 48 |
been used to | 48 |
the genome sequence | 48 |
of the s | 48 |
sequence analysis of | 48 |
are shown in | 48 |
the most common | 48 |
has been used | 48 |
of the c | 48 |
in vitro and | 48 |
of the disease | 48 |
the performance of | 48 |
sequences that are | 47 |
the quality of | 47 |
use of the | 47 |
suggests that the | 47 |
be used as | 47 |
regions of the | 47 |
is known to | 47 |
of the four | 47 |
this study was | 47 |
of the data | 47 |
obtained from the | 47 |
supported by the | 46 |
we have developed | 46 |
at least one | 46 |
of a single | 46 |
residues in the | 46 |
appears to be | 46 |
many of the | 46 |
be found in | 46 |
distribution of the | 46 |
similar to the | 46 |
amino acids in | 46 |
of all the | 46 |
the most abundant | 46 |
of the target | 46 |
sequence in the | 46 |
the result of | 46 |
dependent on the | 45 |
in recent years | 45 |
the most important | 45 |
characterization of a | 45 |
for the first | 45 |
s and s | 45 |
results indicate that | 45 |
in this case | 45 |
position of the | 45 |
the viral genome | 45 |
is possible to | 45 |
for each of | 45 |
shown in table | 45 |
of the peptides | 45 |
in the development | 45 |
and can be | 44 |
were obtained from | 44 |
the complete genome | 44 |
is represented by | 44 |
and evolution of | 44 |
this work was | 44 |
led to the | 44 |
to each other | 44 |
the frequency of | 44 |
has not been | 44 |
study was to | 44 |
mutations in the | 44 |
a result of | 44 |
this is the | 44 |
the lack of | 44 |
presence of the | 44 |
immune repertoire classification | 44 |
the structure and | 43 |
sequences from the | 43 |
the goal of | 43 |
in response to | 43 |
a member of | 43 |
modern hopfield networks | 43 |
of the enzyme | 43 |
and in vivo | 43 |
a family of | 43 |
due to its | 43 |
indicate that the | 43 |
any of the | 43 |
close to the | 43 |
solid phase peptide | 43 |
amino acid composition | 43 |
increase in the | 43 |
structural and functional | 43 |
are used to | 42 |
total number of | 42 |
has also been | 42 |
structures of the | 42 |
de novo assembly | 42 |
the genomes of | 42 |
are based on | 42 |
to evaluate the | 42 |
in this section | 42 |
to form a | 42 |
of these peptides | 42 |
polymerase chain reaction | 42 |
a protein sequence | 42 |
the interaction between | 42 |
is the number | 41 |
information on the | 41 |
have been shown | 41 |
of the dna | 41 |
we have shown | 41 |
based on their | 41 |
considered to be | 41 |
in the past | 41 |
added to the | 41 |
the generation of | 41 |
national center for | 41 |
of the rna | 41 |
we have used | 41 |
the same time | 41 |
was used for | 41 |
is composed of | 41 |
is the first | 40 |
will be presented | 40 |
biological activity of | 40 |
the amino acids | 40 |
binding to the | 40 |
differences in the | 40 |
structure and function | 40 |
an example of | 40 |
dependent rna polymerase | 40 |
draft genome sequence | 40 |
vitro and in | 40 |
one or more | 40 |
observed in the | 40 |
a dna sequence | 40 |
to be involved | 40 |
to predict the | 40 |
insights into the | 40 |
to increase the | 39 |
was shown to | 39 |
our understanding of | 39 |
the introduction of | 39 |
domain of the | 39 |
the protein sequence | 39 |
structure of a | 39 |
due to their | 39 |
the characterization of | 39 |
be able to | 39 |
the course of | 39 |
in the following | 39 |
the context of | 39 |
that there is | 39 |
of the amino | 39 |
identified in the | 39 |
in a single | 39 |
the field of | 39 |
the construction of | 39 |
and amino acid | 39 |
protein structure prediction | 39 |
the present work | 39 |
complete genome sequences | 39 |
is present in | 39 |
it is also | 39 |
play an important | 39 |
protein secondary structure | 39 |
is an important | 39 |
in some cases | 38 |
alignment of the | 38 |
have been found | 38 |
in the last | 38 |
formation of a | 38 |
were carried out | 38 |
that it is | 38 |
been shown that | 38 |
open reading frame | 38 |
rest of the | 38 |
to assess the | 38 |
amino acids and | 38 |
intrinsically disordered proteins | 38 |
a list of | 38 |
we developed a | 38 |
from the same | 38 |
a database of | 38 |
is important to | 38 |
at the c | 38 |
center for biotechnology | 38 |
in this context | 38 |
we used the | 38 |
proteins in the | 37 |
human immunodeficiency virus | 37 |
needs to be | 37 |
is a key | 37 |
is likely to | 37 |
sequencing of the | 37 |
likely to be | 37 |
a pair of | 37 |
in combination with | 37 |
have also been | 37 |
focused on the | 37 |
have not been | 37 |
stability of the | 37 |
to find the | 37 |
and its application | 37 |
addition to the | 37 |
be used in | 37 |
than that of | 37 |
this type of | 37 |
the percentage of | 37 |
the position of | 36 |
is that the | 36 |
the probability of | 36 |
the potential to | 36 |
secondary structure of | 36 |
in case of | 36 |
at the n | 36 |
the rest of | 36 |
the location of | 36 |
quality of the | 36 |
isolated from a | 36 |
that there are | 36 |
the university of | 36 |
depends on the | 36 |
development of a | 36 |
aim of this | 36 |
to improve the | 36 |
the purpose of | 36 |
effect of the | 36 |
we conclude that | 36 |
and the other | 36 |
the total number | 36 |
acid sequence of | 36 |
to the same | 36 |
the emergence of | 36 |
respect to the | 35 |
the stability of | 35 |
nuclear magnetic resonance | 35 |
the activation of | 35 |
insight into the | 35 |
key role in | 35 |
belongs to the | 35 |
identification of the | 35 |
of the new | 35 |
mechanism of action | 35 |
to this end | 35 |
the dna sequence | 35 |
the utility of | 35 |
small number of | 35 |
dna sequences and | 35 |
of gene expression | 35 |
of a given | 35 |
work was supported | 35 |
to calculate the | 35 |
state of the | 35 |
the wild type | 35 |
active site of | 35 |
as a consequence | 35 |
they can be | 35 |
genome of the | 35 |
belong to the | 35 |
compared with the | 35 |
analysis based on | 34 |
we have found | 34 |
to determine whether | 34 |
i i i | 34 |
in the genome | 34 |
as in the | 34 |
for the detection | 34 |
have been proposed | 34 |
the relationship between | 34 |
it is important | 34 |
model of the | 34 |
there are many | 34 |
can be considered | 34 |
for the design | 34 |
we present the | 34 |
it is the | 34 |
complete nucleotide sequence | 34 |
of the major | 34 |
by using the | 34 |
in the literature | 34 |
high degree of | 34 |
can be applied | 34 |
is associated with | 34 |
were subjected to | 34 |
formation of the | 34 |
interaction with the | 34 |
we find that | 34 |
half of the | 34 |
for the synthesis | 34 |
the origin of | 33 |
of these proteins | 33 |
a key role | 33 |
appear to be | 33 |
of protein structure | 33 |
to those of | 33 |
of dna sequence | 33 |
change in the | 33 |
were identified in | 33 |
the united states | 33 |
in the n | 33 |
at the end | 33 |
and so on | 33 |
of the different | 33 |
in the range | 33 |
were synthesized by | 33 |
is characterized by | 33 |
have to be | 33 |
effect on the | 33 |
is essential for | 33 |
was performed using | 33 |
has been proposed | 33 |
the properties of | 33 |
for a given | 33 |
we are currently | 33 |
may not be | 33 |
the national center | 33 |
of influenza a | 33 |
the binding site | 33 |
it should be | 33 |
to be more | 33 |
shows that the | 33 |
is necessary to | 33 |
correspond to the | 33 |
determined by the | 33 |
it was shown | 33 |
development of new | 33 |
is responsible for | 33 |
the nucleotide sequence | 33 |
and of the | 33 |
the control of | 32 |
for biotechnology information | 32 |
high levels of | 32 |
which may be | 32 |
molecular dynamics simulations | 32 |
this suggests that | 32 |
knowledge of the | 32 |
available in the | 32 |
with an average | 32 |
similar to those | 32 |
followed by a | 32 |
of the gene | 32 |
it was found | 32 |
of this work | 32 |
in the second | 32 |
site of the | 32 |
belonging to the | 32 |
wide variety of | 32 |
each amino acid | 32 |
the prediction of | 32 |
in this way | 32 |
the influence of | 32 |
corresponds to the | 32 |
data with implanted | 32 |
of the corresponding | 32 |
suggesting that the | 32 |
of which are | 32 |
amino acids are | 32 |
is similar to | 32 |
an increase in | 32 |
features of the | 32 |
to analyze the | 32 |
included in the | 32 |
protein sequences based | 32 |
can lead to | 32 |
the target protein | 32 |
strand rna viruses | 31 |
amino acid identity | 31 |
to reduce the | 31 |
the need for | 31 |
of the model | 31 |
in most cases | 31 |
have been reported | 31 |
which has been | 31 |
of the resulting | 31 |
of the other | 31 |
in all the | 31 |
the efficiency of | 31 |
leads to the | 31 |
the problem of | 31 |
we note that | 31 |
we investigated the | 31 |
were used for | 31 |
resulted in a | 31 |
with the same | 31 |
be related to | 31 |
play a role | 31 |
the first time | 31 |
more than one | 31 |
determination of the | 31 |
we were able | 31 |
the creation of | 31 |
as an example | 31 |
we use the | 31 |
lead to the | 31 |
when compared to | 31 |
with that of | 31 |
central nervous system | 31 |
the s protein | 31 |
out of the | 31 |
of the number | 31 |
of the tree | 31 |
and that the | 31 |
a subset of | 31 |
be considered as | 31 |
a wide variety | 31 |
the query sequence | 31 |
was found in | 31 |
has been reported | 31 |
as a model | 31 |
to obtain the | 31 |
represented by a | 31 |
results in a | 31 |
rna secondary structures | 30 |
are present in | 30 |
a phylogenetic tree | 30 |
analysis of dna | 30 |
plays an important | 30 |
were shown to | 30 |
as described in | 30 |
to play a | 30 |
of intrinsic disorder | 30 |
human genome project | 30 |
that they are | 30 |
associated with a | 30 |
accuracy of the | 30 |
to estimate the | 30 |
in the context | 30 |
in other words | 30 |
thought to be | 30 |
the impact of | 30 |
of viral rna | 30 |
this study we | 30 |
located at the | 30 |
along with the | 30 |
tomato leaf curl | 30 |
was isolated from | 30 |
of the structure | 30 |
the crystal structure | 30 |
interact with the | 30 |
consists of a | 30 |
the search for | 30 |
of viral sequences | 30 |
results of the | 30 |
of a large | 30 |
the form of | 30 |
carried out by | 30 |
with implanted signals | 30 |
protein data bank | 30 |
to be used | 30 |
to obtain a | 30 |
used in this | 30 |
we have studied | 30 |
in agreement with | 29 |
the immune system | 29 |
is the only | 29 |
data not shown | 29 |
to characterize the | 29 |
of proteins and | 29 |
the target sequence | 29 |
in the s | 29 |
so as to | 29 |
a part of | 29 |
the preparation of | 29 |
large numbers of | 29 |
that could be | 29 |
the plasma membrane | 29 |
for the treatment | 29 |
machine learning methods | 29 |
number of instances | 29 |
listed in table | 29 |
part of a | 29 |
are associated with | 29 |
there is an | 29 |
and the number | 29 |
derived from a | 29 |
to test the | 29 |
a new method | 29 |
isolated from the | 29 |
here we present | 29 |
detected in the | 29 |
to the development | 29 |
of the samples | 29 |
we have also | 29 |
is required for | 29 |
binding of the | 29 |
we believe that | 29 |
the conformation of | 29 |
of at least | 29 |
basis of the | 29 |
of the family | 29 |
many of these | 28 |
the choice of | 28 |
portion of the | 28 |
the sequences are | 28 |
sequences and their | 28 |
as it is | 28 |
in the other | 28 |
the inhibition of | 28 |
to compare the | 28 |
intrinsic disorder in | 28 |
was determined by | 28 |
surface of the | 28 |
may be a | 28 |
in the viral | 28 |
multiple sequence alignments | 28 |
there has been | 28 |
here we report | 28 |
differences between the | 28 |
is defined as | 28 |
feline infectious peritonitis | 28 |
of protein sequence | 28 |
is a major | 28 |
to interact with | 28 |
these results suggest | 28 |
in a protein | 28 |
is consistent with | 28 |
the availability of | 28 |
our results show | 28 |
this is a | 28 |
for which the | 28 |
studies of the | 28 |
with the highest | 28 |
the action of | 28 |
contribute to the | 28 |
different types of | 28 |
in the two | 28 |
are found in | 28 |
the beginning of | 28 |
are the most | 28 |
of the cell | 28 |
expected to be | 28 |
used as the | 28 |
the order of | 28 |
well as in | 27 |
the first step | 27 |
be applied to | 27 |
as part of | 27 |
the concept of | 27 |
is due to | 27 |
the distance between | 27 |
was able to | 27 |
protein sequences and | 27 |
the signal sequence | 27 |
it may be | 27 |
those of the | 27 |
a novel coronavirus | 27 |
in a variety | 27 |
location of the | 27 |
is important for | 27 |
the spread of | 27 |
their ability to | 27 |
were used in | 27 |
broad range of | 27 |
because of their | 27 |
a function of | 27 |
only a small | 27 |
the synthesis and | 27 |
together with the | 27 |
in a sequence | 27 |
the sequence is | 27 |
is believed to | 27 |
identifi cation of | 27 |
contrast to the | 27 |
acid sequences of | 27 |
is related to | 27 |
to elucidate the | 27 |
have the same | 27 |
sequences with the | 27 |
sites of the | 27 |
been found to | 27 |
synthesis of a | 27 |
that the number | 27 |
tool for the | 27 |
note that the | 27 |
of rna viruses | 27 |
for the presence | 27 |
and function of | 27 |
are responsible for | 27 |
protein in the | 26 |
carried out using | 26 |
genes involved in | 26 |
dna sequences based | 26 |
carried out in | 26 |
the cost of | 26 |
can be seen | 26 |
is crucial for | 26 |
in the brain | 26 |
was found that | 26 |
two types of | 26 |
of the full | 26 |
in the field | 26 |
high affi nity | 26 |
methods have been | 26 |
protein structure and | 26 |
the biological activity | 26 |
are characterized by | 26 |
two or more | 26 |
we propose a | 26 |
the proposed method | 26 |
emerson et al | 26 |
demonstrated that the | 26 |
there are two | 26 |
be explained by | 26 |
bind to the | 26 |
proteins involved in | 26 |
there was a | 26 |
described in the | 26 |
virus variation resource | 26 |
surface plasmon resonance | 26 |
the hypothesis that | 26 |
in presence of | 26 |
analysis of a | 26 |
insertions and deletions | 26 |
similarity dissimilarity analysis | 26 |
the vast majority | 26 |
characterized by a | 26 |
comparative analysis of | 26 |
of the total | 26 |
a collection of | 26 |
to explore the | 26 |
can be easily | 26 |
it is known | 26 |
vast majority of | 26 |
in the process | 26 |
were tested for | 26 |
a consequence of | 26 |
identical to the | 26 |
a query sequence | 26 |
of the binding | 26 |
the potential of | 26 |
influenza a viruses | 26 |
c for min | 26 |
for all the | 26 |
results showed that | 26 |
position in the | 26 |
indicates that the | 25 |
was shown that | 25 |
to the protein | 25 |
caused by the | 25 |
of the molecular | 25 |
characteristics of the | 25 |
important for the | 25 |
the genbank database | 25 |
is in the | 25 |
one of these | 25 |
may be used | 25 |
for the study | 25 |
has been found | 25 |
were identified as | 25 |
terminus of the | 25 |
the value of | 25 |
be responsible for | 25 |
basic local alignment | 25 |
of the main | 25 |
but it is | 25 |
form of the | 25 |
we have synthesized | 25 |
in the regulation | 25 |
the time of | 25 |
interaction of the | 25 |
alignment search tool | 25 |
of the d | 25 |
we propose that | 25 |
the assembly of | 25 |
applied to the | 25 |
example of a | 25 |
of sequences and | 25 |
do not have | 25 |
binding site of | 25 |
which could be | 25 |
of the a | 25 |
because it is | 25 |
also known as | 25 |
that has been | 25 |
the dna sequences | 25 |
of the complete | 25 |
the sum of | 25 |
expressed in e | 25 |
description of the | 25 |
except for the | 25 |
to the number | 25 |
may also be | 25 |
is expected to | 25 |
for this purpose | 25 |
indicating that the | 25 |
it is necessary | 25 |
been identified in | 25 |
be noted that | 25 |
of infectious diseases | 25 |
east respiratory syndrome | 25 |
is equal to | 25 |
different from the | 25 |
suggested that the | 25 |
the need to | 25 |
defined by the | 25 |
the spike protein | 25 |
activation of the | 25 |
values of the | 25 |
in each of | 25 |
west nile virus | 25 |
was observed in | 25 |
case of the | 25 |
is found in | 25 |
of sequence data | 25 |
the complexity of | 25 |
has been developed | 25 |
of the genus | 25 |
could not be | 25 |
of the ntp | 25 |
method for the | 24 |
serve as a | 24 |
is supported by | 24 |
majority of the | 24 |
seem to be | 24 |
middle east respiratory | 24 |
local alignment search | 24 |
to better understand | 24 |
this work we | 24 |
each of these | 24 |
allowed us to | 24 |
by a single | 24 |
of these sequences | 24 |
of these two | 24 |
component of the | 24 |
the incorporation of | 24 |
of the e | 24 |
we can see | 24 |
of the coronavirus | 24 |
of protein structures | 24 |
the influenza virus | 24 |
relative to the | 24 |
in the formation | 24 |
are consistent with | 24 |
the extent of | 24 |
this can be | 24 |
study of the | 24 |
is mediated by | 24 |
attached to the | 24 |
the sequences were | 24 |
in the design | 24 |
to address the | 24 |
limited number of | 24 |
to generate the | 24 |
such as those | 24 |
set of sequences | 24 |
essential for the | 24 |
the sequences in | 24 |
in the cell | 24 |
by the presence | 24 |
to bind to | 24 |
secondary structure prediction | 24 |
that do not | 24 |
the protein is | 24 |
the growth of | 24 |
the reference sequence | 24 |
leads to a | 24 |
amino acid residue | 24 |
a comparison of | 24 |
of the putative | 24 |
is identical to | 24 |
and has been | 24 |
influenza a virus | 24 |
is a very | 24 |
and for the | 24 |
background and aims | 24 |
based on these | 24 |
peptides and proteins | 24 |
the occurrence of | 24 |
two of the | 24 |
the addition of | 24 |
phylogenetic tree of | 24 |
the interaction with | 24 |
is not a | 24 |
proteins can be | 24 |
of the viruses | 24 |
linked to the | 24 |
we do not | 24 |
of severe acute | 24 |
in the genbank | 24 |
in section a | 24 |
we showed that | 24 |
the in silico | 24 |
to create a | 24 |
well as a | 23 |
p and p | 23 |
viruses in the | 23 |
of the present | 23 |
use of a | 23 |
development of the | 23 |
interaction between the | 23 |
as a function | 23 |
of the membrane | 23 |
studies have shown | 23 |
better understanding of | 23 |
a high degree | 23 |
to develop a | 23 |
properties of amino | 23 |
would like to | 23 |
the side chain | 23 |
the structural and | 23 |
provided by the | 23 |
have been described | 23 |
are likely to | 23 |
mechanism of the | 23 |
side of the | 23 |
the immune response | 23 |
of the native | 23 |
at least two | 23 |
only in the | 23 |
at the level | 23 |
represented by the | 23 |
been applied to | 23 |
the effectiveness of | 23 |
that may be | 23 |
the basis for | 23 |
number of clusters | 23 |
the similarity of | 23 |
led to a | 23 |
a sequence of | 23 |
the combination of | 23 |
that are not | 23 |
repetitive dna sequences | 23 |
the lengths of | 23 |
a class of | 23 |
generated by the | 23 |
none of the | 23 |
we present a | 23 |
when compared with | 23 |
amino acids with | 23 |
we used a | 23 |
in the form | 23 |
taken into account | 23 |
the method of | 23 |
are similar to | 23 |
of h n | 23 |
followed by the | 23 |
in the future | 23 |
results in the | 23 |
in the ncbi | 23 |
based on sequence | 23 |
an amino acid | 23 |
details of the | 23 |
of the l | 23 |
our results suggest | 23 |
can then be | 23 |
to generate a | 23 |
hrv and hev | 23 |
genes in the | 23 |
leading to the | 23 |
has to be | 23 |
next generation sequencing | 23 |
the classification of | 23 |
this approach is | 23 |
the h n | 23 |
is thought to | 22 |
also be used | 22 |
the graphical representation | 22 |
residues of the | 22 |
machine learning algorithms | 22 |
of the non | 22 |
were collected from | 22 |
of the known | 22 |
the determination of | 22 |
used to identify | 22 |
based sequence embedding | 22 |
prediction of protein | 22 |
can be viewed | 22 |
access to the | 22 |
used to generate | 22 |
be divided into | 22 |
we have identified | 22 |
this work is | 22 |
at the time | 22 |
sequences and the | 22 |
and development of | 22 |
been developed for | 22 |
so that the | 22 |
the inclusion of | 22 |
of sequences in | 22 |
the central nervous | 22 |
the loss of | 22 |
be associated with | 22 |
of the complex | 22 |
by using a | 22 |
for the analysis | 22 |
of the entire | 22 |
due to a | 22 |
the significance of | 22 |
synthesis of the | 22 |
the sensitivity of | 22 |
of the novel | 22 |
overview of the | 22 |
independent of the | 22 |
s s and | 22 |
the sars coronavirus | 22 |
for detection of | 22 |
indicated that the | 22 |
the sequence data | 22 |
in cell culture | 22 |
in the central | 22 |
the cmv dataset | 22 |
is possible that | 22 |
there are several | 22 |
simulated immunosequencing data | 22 |
hidden markov models | 22 |
are listed in | 22 |
representation of the | 22 |
there have been | 22 |
graphical representations of | 22 |
in our laboratory | 22 |
in the host | 22 |
a protein structure | 22 |
in the analysis | 22 |
to the sequence | 22 |
as a new | 22 |
resulted in the | 22 |
were found in | 22 |
secondary structure and | 22 |
than of the | 22 |
it was also | 22 |
of l oc | 22 |
of more than | 22 |
in the middle | 22 |
of them are | 22 |
relationship between the | 22 |
the ratio of | 22 |
components of the | 22 |
resulting in a | 22 |
the type of | 22 |
of action of | 22 |
characterized by the | 22 |
divided into two | 22 |
the release of | 22 |
and identification of | 21 |
mediated by the | 21 |
to measure the | 21 |
the frequencies of | 21 |
of the b | 21 |
its ability to | 21 |
this means that | 21 |
the understanding of | 21 |
considered as a | 21 |
required for the | 21 |
could also be | 21 |
orders of magnitude | 21 |
positions in the | 21 |
are given in | 21 |
result of the | 21 |
it is well | 21 |
molecular characterization of | 21 |
taking into account | 21 |
the viral rna | 21 |
the prevalence of | 21 |
difference between the | 21 |
studies on the | 21 |
for the identification | 21 |
conformation of the | 21 |
numerical characterization of | 21 |
with the exception | 21 |
as one of | 21 |
sequence and the | 21 |
the two sequences | 21 |
component spectral representation | 21 |
acts as a | 21 |
depend on the | 21 |
native chemical ligation | 21 |
of protein folding | 21 |
to detect the | 21 |
frequency of the | 21 |
of the proposed | 21 |
has been identified | 21 |
sequence accession jx | 21 |
to the n | 21 |
have been studied | 21 |
the phylogenetic analysis | 21 |
a and a | 21 |
the aug codon | 21 |
of a gene | 21 |
for each sequence | 21 |
some of them | 21 |
and have been | 21 |
metagenomic analysis of | 21 |
of the signal | 21 |
been developed to | 21 |
was studied by | 21 |
we have investigated | 21 |
cleavage of the | 21 |
to have a | 21 |
of all possible | 21 |
wang et al | 21 |
solid phase synthesis | 21 |
in spite of | 21 |
version of the | 21 |
sequence and structure | 21 |
point of view | 21 |
has been demonstrated | 21 |
analysis of protein | 21 |
used to study | 21 |
agreement with the | 21 |
the numbers of | 21 |
in the number | 21 |
the differences between | 21 |
of the structural | 21 |
dna and rna | 21 |
they have been | 21 |
the center of | 21 |
it would be | 21 |
terminal part of | 21 |
of the original | 21 |
based on this | 21 |
an overview of | 21 |
proved to be | 21 |
can be divided | 20 |
methods such as | 20 |
is necessary for | 20 |
have developed a | 20 |
from patients with | 20 |
variants of the | 20 |
is a member | 20 |
of viral genome | 20 |
on the number | 20 |
sequence accession cp | 20 |
composition of the | 20 |
it will be | 20 |
is dependent on | 20 |
new method for | 20 |
the in vitro | 20 |
the peptides were | 20 |
amino acids were | 20 |
this study is | 20 |
in the tree | 20 |
in complex with | 20 |
because of its | 20 |
to the cell | 20 |
in the sample | 20 |
in the alignment | 20 |
is known that | 20 |
the attention mechanism | 20 |
on the same | 20 |
given in table | 20 |
sequence has been | 20 |
high level of | 20 |
dna primary sequences | 20 |
have been made | 20 |
a broad range | 20 |
could be a | 20 |
is known about | 20 |
emerging infectious diseases | 20 |
representation of proteins | 20 |
used in a | 20 |
used as an | 20 |
of infectious disease | 20 |
isothermal titration calorimetry | 20 |
size exclusion chromatography | 20 |
to the other | 20 |
are related to | 20 |
d structure of | 20 |
proteins of the | 20 |
of secondary structure | 20 |
from a single | 20 |
structural characterization of | 20 |
in the treatment | 20 |
are expected to | 20 |
method based on | 20 |
coding sequences of | 20 |
as determined by | 20 |
only a few | 20 |
been used for | 20 |
in the dataset | 20 |
in patients with | 20 |
of each of | 20 |
to compute the | 20 |
amino acid is | 20 |
may lead to | 20 |
the abundance of | 20 |
of biological sequences | 20 |
with those of | 20 |
of the query | 20 |
may play a | 20 |
proteins have been | 20 |
a tool for | 20 |
in the early | 20 |
we have previously | 20 |
were prepared by | 20 |
amino acid substitutions | 20 |
pair of sequences | 20 |
assigned to the | 20 |
the concentration of | 20 |
for use in | 20 |
beginning of the | 20 |
we demonstrate that | 20 |
was added to | 20 |
very similar to | 20 |
and the corresponding | 20 |
these results indicate | 20 |
the difference between | 20 |
the scientific community | 20 |
in comparison to | 20 |
a novel method | 20 |
of this protein | 20 |
importance of the | 20 |
orientation of the | 20 |
a small number | 20 |
free sequence comparison | 20 |
that in the | 20 |
at the beginning | 20 |
variability in the | 20 |
the de novo | 20 |
the induction of | 20 |
a length of | 20 |
were obtained by | 20 |
conflict of interest | 20 |
has been the | 20 |
physicochemical properties of | 20 |
into a single | 20 |
a mixture of | 20 |
to identify a | 20 |
in many cases | 20 |
but not in | 19 |
bound to the | 19 |
has led to | 19 |
the increase in | 19 |
translation of the | 19 |
in the evolution | 19 |
to describe the | 19 |
t cell receptor | 19 |
to examine the | 19 |
sequence can be | 19 |
li et al | 19 |
is used for | 19 |
the selection of | 19 |
was based on | 19 |
in aqueous solution | 19 |
the locations of | 19 |
all of these | 19 |
order to investigate | 19 |
of secondary structures | 19 |
the cell membrane | 19 |
mbkm with dmk | 19 |
in our study | 19 |
the auditory display | 19 |
distance between the | 19 |
for the sequence | 19 |
this is an | 19 |
has been studied | 19 |
investigation of the | 19 |
infl uence of | 19 |
sequence alignment and | 19 |
but also in | 19 |
identification and characterization | 19 |
in escherichia coli | 19 |
does not have | 19 |
be useful for | 19 |
the free energy | 19 |
of the results | 19 |
the protein structure | 19 |
the strength of | 19 |
the case for | 19 |
could be detected | 19 |
at room temperature | 19 |
the investigation of | 19 |
data suggest that | 19 |
is available in | 19 |
a model of | 19 |
the characteristics of | 19 |
aspects of similarity | 19 |
on a single | 19 |
defined as the | 19 |
designed and synthesized | 19 |
affi nity for | 19 |
we have recently | 19 |
is caused by | 19 |
new generation of | 19 |
it is likely | 19 |
with the aim | 19 |
to provide a | 19 |
codon usage bias | 19 |
of similarity dissimilarity | 19 |
the replication of | 19 |
to be highly | 19 |
i and ii | 19 |
predicted to be | 19 |
the task of | 19 |
that they have | 19 |
in a given | 19 |
is a new | 19 |
of viral proteins | 19 |
be important for | 19 |
the virus variation | 19 |
as described previously | 19 |
the host cell | 19 |
is used as | 19 |
been reported in | 19 |
to a particular | 19 |
have found that | 19 |
regions in the | 19 |
the first and | 19 |
the first one | 19 |
representations of dna | 19 |
similarity between the | 19 |
hepatitis b virus | 19 |
the exception of | 19 |
believed to be | 19 |
the authors declare | 19 |
in the previous | 19 |
modifi cation of | 19 |
a measure of | 19 |
by solid phase | 19 |
evaluation of the | 19 |
of the genetic | 19 |
the possibility that | 19 |
the a and | 19 |
used to predict | 19 |
a panel of | 19 |
according to their | 19 |
in the order | 19 |
graphical representation and | 19 |
to be an | 19 |
in the sequences | 19 |
by nmr spectroscopy | 19 |
to the high | 19 |
in the public | 19 |
been found in | 19 |
of thousands of | 19 |
and on the | 19 |
in which a | 19 |
were downloaded from | 19 |
of these viruses | 19 |
the genetic code | 19 |
randic et al | 19 |
and they are | 19 |
should be noted | 19 |
are used in | 19 |
different parts of | 19 |
with regard to | 19 |
expressed in the | 19 |
of dna primary | 18 |
for understanding the | 18 |
effects of the | 18 |
a protein is | 18 |
to the formation | 18 |
each of which | 18 |
serves as a | 18 |
of escherichia coli | 18 |
in the virus | 18 |
performance of the | 18 |
was confirmed by | 18 |
is also a | 18 |
light on the | 18 |
has been made | 18 |
we assume that | 18 |
a crucial role | 18 |
a lack of | 18 |
better understand the | 18 |
that the two | 18 |
taxonomy of viruses | 18 |
for min at | 18 |
in the united | 18 |
the protein data | 18 |
been made to | 18 |
evidence for the | 18 |
to show that | 18 |
affected by the | 18 |
the relevance of | 18 |
grid search over | 18 |
are located in | 18 |
fact that the | 18 |
search over hyperparameters | 18 |
the region of | 18 |
in table a | 18 |
to the membrane | 18 |
and in vitro | 18 |
in the latter | 18 |
of the individual | 18 |
development of fip | 18 |
a highly conserved | 18 |
of the spike | 18 |
i and j | 18 |
order to study | 18 |
are presented in | 18 |
recent advances in | 18 |
and the presence | 18 |
in mammalian cells | 18 |
a new generation | 18 |
known as the | 18 |
a secondary structure | 18 |
be useful in | 18 |
the isolation of | 18 |
at the molecular | 18 |
of this family | 18 |
the similarity between | 18 |
terminal region of | 18 |
terms of the | 18 |
the kinetics of | 18 |
the observation that | 18 |
rna secondary structure | 18 |
the immune status | 18 |
and to the | 18 |
a library of | 18 |
dna sequence is | 18 |
amino acid substitution | 18 |
crystal structures of | 18 |
protein coding genes | 18 |
of a variety | 18 |
data on the | 18 |
design of new | 18 |
a protein of | 18 |
world data with | 18 |
genes that are | 18 |
the pathogenesis of | 18 |
be the most | 18 |
in the x | 18 |
is the major | 18 |
can be detected | 18 |
were used as | 18 |
immunodeficiency virus type | 18 |
of which is | 18 |
crucial role in | 18 |
was applied to | 18 |
than those of | 18 |
sequences for the | 18 |
the complete nucleotide | 18 |
a powerful tool | 18 |
the positive class | 18 |
the international committee | 18 |
the input sequences | 18 |
downloaded from the | 18 |
are indicated by | 18 |
binds to the | 18 |
of novel coronavirus | 18 |
within the same | 18 |
of antimicrobial peptides | 18 |
infectious bronchitis virus | 18 |
the advantage of | 18 |
of the standard | 18 |
purpose of this | 18 |
to the c | 18 |
the fraction of | 18 |
convolutional neural network | 18 |
leading to a | 18 |
the list of | 18 |
the last decade | 18 |
of avian influenza | 18 |
demonstrate that the | 18 |
the definition of | 18 |
will be used | 18 |
n is the | 18 |
the usefulness of | 18 |
sequences have been | 18 |
little is known | 18 |
the side chains | 18 |
of the distribution | 18 |
protein sequence and | 18 |
of a particular | 18 |
of dna and | 18 |
in the c | 18 |
with more than | 18 |
is widely used | 18 |
instead of the | 18 |
can see that | 18 |
be due to | 18 |
of the active | 18 |
the coding regions | 18 |
into account the | 18 |
was used in | 18 |
encoded by the | 18 |
have led to | 18 |
the appearance of | 18 |
than in the | 18 |
the folding of | 18 |
in comparison with | 18 |
is applied to | 18 |
histone h coding | 18 |
structures in the | 18 |
mhc class i | 18 |
been identified as | 18 |
number of different | 18 |
these sequences are | 18 |
the template structure | 18 |
of influenza virus | 18 |
were detected in | 18 |
allow us to | 18 |
instances per bag | 18 |
in the nucleus | 18 |
of proteins in | 18 |
web server for | 18 |
of the information | 18 |
it appears that | 18 |
efficiency of the | 18 |
to understand how | 18 |
to our knowledge | 18 |
basis for the | 18 |
were characterized by | 18 |
in a large | 18 |
and at the | 18 |
the p protein | 18 |
of the h | 17 |
relies on the | 17 |
used to calculate | 17 |
such as a | 17 |
a d graphical | 17 |
crucial for the | 17 |
peptides derived from | 17 |
huang et al | 17 |
example of the | 17 |
levels of the | 17 |
this may be | 17 |
evolutionary history of | 17 |
the method is | 17 |
and biological activity | 17 |
focus on the | 17 |
of the world | 17 |
may be the | 17 |
a very high | 17 |
to be important | 17 |
of the genes | 17 |
of viruses in | 17 |
the sequence and | 17 |
diseases such as | 17 |
was performed by | 17 |
deposited in the | 17 |
we examined the | 17 |
on the use | 17 |
to overcome this | 17 |
to ensure that | 17 |
of length n | 17 |
was detected in | 17 |
to inhibit the | 17 |
even in the | 17 |
may have been | 17 |
of nucleic acid | 17 |
then used to | 17 |
found in all | 17 |
sequence of human | 17 |
molecular weight of | 17 |
can be obtained | 17 |
spread of the | 17 |
is not clear | 17 |
in the coding | 17 |
presence of an | 17 |
some of which | 17 |
patterns in the | 17 |
the source of | 17 |
could lead to | 17 |
the specificity of | 17 |
distance between two | 17 |
in the current | 17 |
and protein sequences | 17 |
of the time | 17 |
with each other | 17 |
the full length | 17 |
in vivo and | 17 |
as previously described | 17 |
dynamic light scattering | 17 |
of modern hopfield | 17 |
the bat transcriptome | 17 |
can be a | 17 |
we aim to | 17 |
causative agent of | 17 |
of our method | 17 |
correlation between the | 17 |
goal of this | 17 |
the molecular level | 17 |
in silico sensitivity | 17 |
used to determine | 17 |
have studied the | 17 |
we describe the | 17 |
were performed using | 17 |
completion of the | 17 |
of the orf | 17 |
its interaction with | 17 |
to the target | 17 |
the similarity dissimilarity | 17 |
and structure of | 17 |
assembly of the | 17 |
order to understand | 17 |
is known as | 17 |
necessary for the | 17 |
appeared to be | 17 |
and s s | 17 |
nucleotide sequences of | 17 |
coronavirus associated with | 17 |
c and c | 17 |
are closely related | 17 |
in a number | 17 |
analyses of the | 17 |
performed using the | 17 |
a new approach | 17 |
the capsid protein | 17 |
standard genetic code | 17 |
number of possible | 17 |
terminal domain of | 17 |
deduced amino acid | 17 |
be attributed to | 17 |
in the template | 17 |
and the c | 17 |
to be very | 17 |
to monitor the | 17 |
is expressed in | 17 |
number of the | 17 |
are important for | 17 |
present in a | 17 |
of instances per | 17 |
we compared the | 17 |
in the original | 17 |
interactions between the | 17 |
has shown that | 17 |
there are no | 17 |
proportional to the | 17 |
inspection of the | 17 |
and from the | 17 |
of the graph | 17 |
peptides were synthesized | 17 |
present study was | 17 |
number of protein | 17 |
has been described | 17 |
gene of the | 17 |
on the presence | 17 |
it does not | 17 |
protein with a | 17 |
seen in the | 17 |
genome sequence data | 17 |
we studied the | 17 |
has been applied | 17 |
discovery of novel | 17 |
exon c ds | 17 |
is not known | 17 |
to produce a | 17 |
to one of | 17 |
to search for | 17 |
the x chromosome | 17 |
convolutional neural networks | 17 |
the first aug | 17 |
supported by a | 17 |
sequence similarity to | 17 |
the s s | 17 |
sequence alignment of | 17 |
for the discovery | 17 |
positions of the | 17 |
have investigated the | 17 |
for the production | 17 |
the most frequent | 17 |
of the database | 17 |
with a high | 17 |
been isolated from | 17 |
the standard genetic | 17 |
university of california | 17 |
is a powerful | 17 |
recurrent neural networks | 17 |
of sequences with | 16 |
of the second | 16 |
higher than the | 16 |
sensitivity and specificity | 16 |
on the sequence | 16 |
is well known | 16 |
proteins that are | 16 |
the idea of | 16 |
were determined by | 16 |
there are a | 16 |
allows us to | 16 |
of the method | 16 |
results of this | 16 |
ramsauer et al | 16 |
representation of a | 16 |
of intrinsically disordered | 16 |
to explain the | 16 |
can be identified | 16 |
the most widely | 16 |
of the genomes | 16 |
binding domain of | 16 |
structure and the | 16 |
were isolated from | 16 |
b and c | 16 |
euclidean distance between | 16 |
the start of | 16 |
by use of | 16 |
are thought to | 16 |
downstream of the | 16 |
of the mrna | 16 |
the comparison of | 16 |
the correlation between | 16 |
goal is to | 16 |
a and c | 16 |
genes and genomes | 16 |
lengths of the | 16 |
of the molecule | 16 |
the dynamics of | 16 |
a basis for | 16 |
it possible to | 16 |
the composition of | 16 |
the contribution of | 16 |
we have to | 16 |
we have designed | 16 |
of the sgc | 16 |
section a we | 16 |
only of the | 16 |
of genes and | 16 |
the levenshtein distance | 16 |
at the protein | 16 |
it is interesting | 16 |
starting point for | 16 |
amino acid changes | 16 |
prediction of the | 16 |
in the model | 16 |
dna sequences of | 16 |
represented sequences in | 16 |
novo assembly of | 16 |
that are used | 16 |
origin of the | 16 |
to construct a | 16 |
the cell surface | 16 |
most of them | 16 |
in the world | 16 |
application of the | 16 |
in the mouse | 16 |
at a time | 16 |
to the next | 16 |
of the latter | 16 |
the nucleotide sequences | 16 |
and y chromosomes | 16 |
biologically active peptides | 16 |
result in a | 16 |
multiple instance learning | 16 |
a way that | 16 |
activity in the | 16 |
is that it | 16 |
yet to be | 16 |
during the last | 16 |
may be useful | 16 |
regulation of the | 16 |
of this enzyme | 16 |
to the presence | 16 |
sequences derived from | 16 |
its application to | 16 |
the endoplasmic reticulum | 16 |
a decrease in | 16 |
for the s | 16 |
represented in the | 16 |
de novo design | 16 |
sequences that were | 16 |
for sequence comparison | 16 |
in the identification | 16 |
be useful to | 16 |
in the amino | 16 |
sequences were identified | 16 |
by the following | 16 |
the structures of | 16 |
order to find | 16 |
conclude that the | 16 |
the evaluation of | 16 |
for analysis of | 16 |
this indicates that | 16 |
step in the | 16 |
among the most | 16 |
in the active | 16 |
activity of a | 16 |
over the last | 16 |
of a human | 16 |
in the region | 16 |
the number and | 16 |
are considered to | 16 |
proteins such as | 16 |
are expressed in | 16 |
inhibition of the | 16 |
in relation to | 16 |
existence of a | 16 |
of novel viruses | 16 |
to the human | 16 |
affi nity and | 16 |
the success of | 16 |
the conversion of | 16 |
and with the | 16 |
for identification of | 16 |
not yet been | 16 |
the pattern of | 16 |
was performed in | 16 |
from each of | 16 |
aspects of the | 16 |
the s gene | 16 |
impact on the | 16 |
immunosequencing data with | 16 |
amino acid in | 16 |
the consensus sequence | 16 |
order to determine | 16 |
proven to be | 16 |
real time pcr | 16 |
of the whole | 16 |
analysis showed that | 16 |
extracted from the | 16 |
because they are | 16 |
which have been | 16 |
a phylogenetic analysis | 16 |
studies showed that | 16 |
analysis of similarity | 16 |
is determined by | 16 |
complexity of the | 16 |
h and h | 16 |
choice of the | 16 |
approaches have been | 16 |
is given by | 16 |
of the host | 16 |
methods based on | 16 |
data in the | 16 |
to perform the | 16 |
is to use | 16 |
the alignment methods | 16 |
in all cases | 16 |
the interactions of | 16 |
increasing number of | 16 |
work is to | 16 |
sequence accession jq | 16 |
are required to | 16 |
a web server | 16 |
sites in the | 16 |
genetic diversity of | 16 |
l and l | 16 |
with high accuracy | 16 |
shown in the | 16 |
an attempt to | 16 |
were identified by | 16 |
were observed in | 16 |
xu et ai | 16 |
the fi nal | 16 |
d graphical representations | 16 |
the orf a | 15 |
the site of | 15 |
in the interaction | 15 |
the most recent | 15 |
tools such as | 15 |
be viewed as | 15 |
which is not | 15 |
coding regions of | 15 |
the diversity of | 15 |
composed of a | 15 |
that the n | 15 |
as a single | 15 |
and some of | 15 |
of the coding | 15 |
and standard deviation | 15 |
two sets of | 15 |
was studied in | 15 |
of the national | 15 |
is the same | 15 |
of the natural | 15 |
is a novel | 15 |
linear and cyclic | 15 |
in the membrane | 15 |
revealed the presence | 15 |
on the structure | 15 |
of the input | 15 |
is likely that | 15 |
new class of | 15 |
result of a | 15 |
has been suggested | 15 |
production of a | 15 |
over the past | 15 |
in the rat | 15 |
the human body | 15 |
in the table | 15 |
of this paper | 15 |
the p signal | 15 |
coding sequence of | 15 |
the specifi c | 15 |
have the potential | 15 |
as for the | 15 |
and found that | 15 |
was obtained from | 15 |
we are able | 15 |
the values of | 15 |
we show the | 15 |
stages of the | 15 |
for this reason | 15 |
random dna sequences | 15 |
mechanism by which | 15 |
sequences of different | 15 |
of viral genomes | 15 |
we want to | 15 |
primer and probe | 15 |
standard amino acids | 15 |
means that the | 15 |
at this position | 15 |
and secondary structure | 15 |
and molecular dynamics | 15 |
a multiple sequence | 15 |
acids in the | 15 |
a better understanding | 15 |
tend to be | 15 |
as a template | 15 |
human and animal | 15 |
be detected by | 15 |
of a series | 15 |
an understanding of | 15 |
side chains of | 15 |
analysis revealed that | 15 |
the department of | 15 |
of our approach | 15 |
the types of | 15 |
of the interaction | 15 |
broad spectrum of | 15 |
mouse hepatitis virus | 15 |
a size of | 15 |
the details of | 15 |
of some of | 15 |
of the polyprotein | 15 |
the alignment of | 15 |
protein can be | 15 |
as a reference | 15 |
peptides have been | 15 |
of the receptor | 15 |
molecular evolution of | 15 |
or more sequences | 15 |
other members of | 15 |
obtained by the | 15 |
the last years | 15 |
similarity to the | 15 |
the family of | 15 |
a change in | 15 |
of proteins with | 15 |
the molecular mechanisms | 15 |
to note that | 15 |
international committee on | 15 |
protein fold recognition | 15 |
of the following | 15 |
diversity of the | 15 |
have been successfully | 15 |
a review of | 15 |
the information about | 15 |
according to our | 15 |
of the five | 15 |
a tree decomposition | 15 |
in the l | 15 |
more than of | 15 |
have already been | 15 |
combined with the | 15 |
in silico validation | 15 |
the results show | 15 |
was determined in | 15 |
are difficult to | 15 |
to demonstrate the | 15 |
in both cases | 15 |
phylogenetic analysis based | 15 |
the genetic diversity | 15 |
is critical for | 15 |
identified as the | 15 |
using a combination | 15 |
the distance matrix | 15 |
different aspects of | 15 |
nucleotide and amino | 15 |
contained in the | 15 |
in the laboratory | 15 |
to form the | 15 |
a limited number | 15 |
in the binding | 15 |
the innate immune | 15 |
of phylogenetic trees | 15 |
a critical role | 15 |
the large number | 15 |
of the core | 15 |
similarity dissimilarity of | 15 |
s s s | 15 |
of sequence space | 15 |
that is not | 15 |
shape of the | 15 |
the causative agent | 15 |
are in the | 15 |
we have been | 15 |
is located in | 15 |
strength of the | 15 |
to use the | 15 |
with and without | 15 |
that the p | 15 |
sequences and its | 15 |
of a set | 15 |
to as the | 15 |
the accumulation of | 15 |
conserved in the | 15 |
can be classified | 15 |
a amino acid | 15 |
we observed that | 15 |
value of the | 15 |
the template and | 15 |
with the sequence | 15 |
for the preparation | 15 |
amino acids to | 15 |
noted that the | 15 |
amino acids into | 15 |
lead to a | 15 |
structural studies of | 15 |
of the genomic | 15 |
also in the | 15 |
structure and dynamics | 15 |
the coding sequences | 15 |
we have isolated | 15 |
the sequence length | 15 |
the area of | 15 |
find that the | 15 |
site in the | 15 |
of up to | 15 |
which leads to | 15 |
formed by the | 15 |
viral genome sequences | 15 |
the four bases | 15 |
and the results | 15 |
genomic analysis of | 15 |
plays a key | 15 |
the evolution and | 15 |
effects on the | 15 |
has recently been | 15 |
primary and secondary | 15 |
molecular basis of | 15 |
as a tool | 15 |
a given sequence | 15 |
p signal sequence | 15 |
peptides and their | 15 |
the samples were | 15 |
of the reference | 15 |
can be performed | 15 |
history of the | 15 |
the interactions between | 15 |
challenge stock virus | 15 |
we are now | 15 |
the middle of | 15 |
whole genome sequencing | 15 |
to a single | 15 |
of base pairs | 15 |
in this review | 15 |
members of this | 15 |
the challenge stock | 15 |
the virus in | 15 |
gene expression in | 15 |
in the data | 15 |
to support the | 15 |
the primary structure | 15 |
for treatment of | 14 |
to infer the | 14 |
the genome size | 14 |
processes such as | 14 |
which has a | 14 |
located on the | 14 |
herpes simplex virus | 14 |
types of data | 14 |
in table s | 14 |
the euclidean distance | 14 |
to be in | 14 |
not only in | 14 |
be assigned to | 14 |
caused by a | 14 |
be present in | 14 |
gene and protein | 14 |
the initiation of | 14 |
which in turn | 14 |
of these new | 14 |
protein structure modeling | 14 |
that all the | 14 |
this class of | 14 |
to build a | 14 |
known that the | 14 |
has been widely | 14 |
rise to a | 14 |
results demonstrate that | 14 |
of human immunodeficiency | 14 |
of these genes | 14 |
sequences with a | 14 |
can help to | 14 |
or amino acid | 14 |
and stability of | 14 |
has become a | 14 |
the er membrane | 14 |
protein of the | 14 |
the onset of | 14 |
of the hiv | 14 |
to a specific | 14 |
binding affi nity | 14 |
in the study | 14 |
see that the | 14 |
before and after | 14 |
fcov zu and | 14 |
the infl uence | 14 |
are used as | 14 |
that some of | 14 |
the replacement of | 14 |
have demonstrated that | 14 |
sequences were obtained | 14 |
feature extraction method | 14 |
all the sequences | 14 |
is an essential | 14 |
table shows the | 14 |
total rna was | 14 |
avian infectious bronchitis | 14 |
single amino acid | 14 |
the molecular biology | 14 |
results will be | 14 |
results of our | 14 |
reduction to specific | 14 |
and characterized by | 14 |
of the above | 14 |
an effi cient | 14 |
powerful tool to | 14 |
discovery of new | 14 |
the hepatitis c | 14 |
of in vitro | 14 |
for binding to | 14 |
immune receptor sequences | 14 |
incomplete purifying selection | 14 |
homology to the | 14 |
the possibility to | 14 |
is a good | 14 |
and sequencing of | 14 |
aim is to | 14 |
used to compute | 14 |
of the population | 14 |
the power of | 14 |
involved in a | 14 |
phase synthesis of | 14 |
to control the | 14 |
affinity of the | 14 |
they do not | 14 |
was to determine | 14 |
to contribute to | 14 |
has been a | 14 |
developed a new | 14 |
with reduction to | 14 |
that cannot be | 14 |
they are not | 14 |
to the virus | 14 |
have focused on | 14 |
expressed in a | 14 |
the result is | 14 |
that the protein | 14 |
of the compounds | 14 |
identity with the | 14 |
the most active | 14 |
on taxonomy of | 14 |
proteins based on | 14 |
and phylogenetic analysis | 14 |
the completion of | 14 |
the validity of | 14 |
we focus on | 14 |
in the area | 14 |
impact of the | 14 |
in the input | 14 |
similarity analysis of | 14 |
primer or probe | 14 |
dna sequence and | 14 |
protein folding and | 14 |
the nucleocapsid protein | 14 |
sequence identity with | 14 |
the results are | 14 |
major role in | 14 |
share a common | 14 |
expression of a | 14 |
in the immune | 14 |
that the virus | 14 |
in the pdb | 14 |
synthesized by the | 14 |
shed light on | 14 |
to define the | 14 |
sequence with the | 14 |
positive and negative | 14 |
was designed to | 14 |
the propagation of | 14 |
for immune repertoire | 14 |
of peptides and | 14 |
in the positive | 14 |
to provide the | 14 |
of a virus | 14 |
these peptides are | 14 |
since it is | 14 |
unnatural amino acids | 14 |
and there is | 14 |
from the other | 14 |
modification of the | 14 |
hyperparameters with reduction | 14 |
there are some | 14 |
the input object | 14 |
been used in | 14 |
an increase of | 14 |
we will present | 14 |
for the same | 14 |
as they are | 14 |
the interpretation of | 14 |
the entire genome | 14 |
are one of | 14 |
can be done | 14 |
the intrinsically disordered | 14 |
that the sequence | 14 |
the modulation of | 14 |
the limitations of | 14 |
an effort to | 14 |
number of genes | 14 |
of the sample | 14 |
of these compounds | 14 |
a small fraction | 14 |
of human influenza | 14 |
in the phylogenetic | 14 |
present study we | 14 |
is encoded by | 14 |
a major role | 14 |
expressed sequence tags | 14 |
has its own | 14 |
in figure a | 14 |
and it can | 14 |
previous studies have | 14 |
is not the | 14 |
functional analysis of | 14 |
are needed to | 14 |
during the first | 14 |
of dengue virus | 14 |
what is the | 14 |
up to the | 14 |
increase of the | 14 |
sequences in a | 14 |
that the presence | 14 |
of a small | 14 |
the bloom filter | 14 |
dna sequences with | 14 |
head and tail | 14 |
order to identify | 14 |
the user to | 14 |
rational design of | 14 |
a method for | 14 |
another example of | 14 |
interactions with the | 14 |
the biology of | 14 |
the core of | 14 |
of the experimental | 14 |
h n avian | 14 |
carried out on | 14 |
average length of | 14 |
evidence for a | 14 |
we would like | 14 |
protein intrinsic disorder | 14 |
in this article | 14 |
of molecular biology | 14 |
degree of similarity | 14 |
the update rule | 14 |
comparable to that | 14 |
construction of the | 14 |
aim of the | 14 |
of the available | 14 |
template and target | 14 |
we introduce a | 14 |
here we describe | 14 |
with the number | 14 |
solution structure of | 14 |
sequence and a | 14 |
the history of | 14 |
over hyperparameters with | 14 |
as an alternative | 14 |
have been isolated | 14 |
nucleic acid sequence | 14 |
has been determined | 14 |
the difference in | 14 |
comparative modeling and | 14 |
in this experiment | 14 |
an average of | 14 |
of rna secondary | 14 |
have been introduced | 14 |
the joint model | 14 |
is derived from | 14 |
is located at | 14 |
consisting of the | 14 |
at least in | 14 |
these results are | 14 |
calculated using the | 14 |
it is often | 14 |
the same as | 14 |
the burden test | 14 |
nucleotide sequences were | 14 |
accumulated natural vector | 14 |
is essential to | 14 |
been proposed that | 14 |
the molecular basis | 14 |
the behaviour of | 14 |
one of its | 14 |
are essential for | 14 |
the severe acute | 14 |
the advent of | 14 |
c virus in | 14 |
in the putative | 14 |
the changes in | 14 |
the novel coronavirus | 14 |
contributes to the | 14 |
of sequences that | 14 |
to the reference | 14 |
first aug codon | 14 |
are capable of | 14 |
compared to other | 14 |
by binding to | 14 |
linked to a | 14 |
observed that the | 14 |
protein sequences are | 14 |
committee on taxonomy | 14 |
elements in the | 14 |
this process is | 14 |
in most of | 14 |
carried out to | 14 |
of the primary | 14 |
of which were | 14 |
presence or absence | 14 |
protein has been | 14 |
were treated with | 14 |
that this is | 14 |
of the biological | 14 |
are available for | 13 |
gives rise to | 13 |
in the different | 13 |
interest in the | 13 |