bigram

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bigram frequency
sir model1032
social distancing270
transmission rate207
infected individuals202
infectious diseases202
reproduction number194
infectious disease154
granted medrxiv147
author funder147
infection rate135
differential equations132
copyright holder132
total number131
time series128
version posted126
infected people120
basic reproduction116
public health116
sir models113
epidemic threshold106
susceptible population91
infected population89
base location89
epidemic model88
model parameters87
final size87
susceptible individuals86
made available86
peer review86
power law85
confirmed cases84
international license82
initial conditions81
total population79
recovery rate78
epidemic models77
sis model76
monte carlo76
novel coronavirus75
coronavirus disease75
population size74
optimal control74
seir model73
cord uid72
doc id72
posted may67
active cases62
incubation period62
herd immunity61
plastic surgery61
epidemiological models60
outing restriction60
i i60
sir epidemic60
compartmental models57
mathematical models57
south korea56
social contacts56
space coordinates56
infectious period54
epidemic dynamics54
infected persons54
standard sir53
johns hopkins52
infectious individuals51
second wave51
machine learning51
growth rate50
medrxiv preprint50
per day50
ordinary differential50
contact rate49
complex networks49
nan doi49
infected cases49
testing policy48
reuse allowed48
without permission48
allowed without48
rights reserved48
phase space46
based models45
reproductive number45
disease transmission44
epidemic peak43
effective reproduction43
social networks43
mitigation measures43
differential equation43
effective distance43
infection rates43
recovered individuals42
death rate42
control measures42
initial condition41
en el41
epidemic spreading41
epidemiological model40
real data40
analytics package40
available data40
infected individual40
disease dynamics40
reported cases39
infectious cases39
seir models39
lockdown measures39
transmission dynamics38
respiratory syndrome38
law distribution38
negative binomial37
united states37
surveillance data36
stochastic sir36
vaccination uptake36
state space35
adomian decomposition35
mathematical theory35
new york35
peak infection34
acute respiratory34
classical sir34
reproduction rate34
memory effects33
exponential growth33
fatality rate33
inverse problem33
structural identifiability32
severe acute32
vital dynamics32
series data32
neural network32
control problem32
parameter values31
size formula31
basic sir31
time evolution31
transcritical bifurcation30
infected person30
influential nodes30
infection dynamics30
posted june29
van kampen29
early dynamics29
model structure29
limiting case29
critical point29
random variable29
mathematical model29
nan sha29
outbreak size29
hopkins data29
recovery rates28
benchmark case28
widely used28
density functional28
different countries28
sird model27
distancing measures27
mathematical modeling27
power spectrum27
functional theory27
reported data27
numerical simulations27
epidemic size27
time period26
transmission rates26
decomposition method26
susceptible individual26
isolation time26
per capita26
pharmaceutical interventions26
infectious population26
numerical results26
time dependent25
contact tracing25
large number25
theoretical predictions25
outbreak sizes25
early stage25
cases per25
agent i25
world health25
time step25
health organization24
growth rates24
markov chain24
many countries24
sir dynamics24
endemic equilibrium24
observed data24
epidemiological data24
disease spread24
asymptomatic infectives24
entire population24
hopkins university24
removed individuals24
become infected24
los datos23
utility function23
latent period23
first wave23
data points23
esir model23
health interventions23
average number23
new cases23
binomial distribution23
numerical threshold23
per unit23
optimization problem23
transition probability23
parameter estimation23
mathematical modelling23
mortality rate23
polynomial growth23
recovered cases22
different values22
ddft model22
epidemic spread22
removal rate22
susceptible people22
basic reproductive22
slow system22
discrete time22
unit time22
data analysis22
loss function22
randomly chosen22
type models22
critical transition22
information entropy22
leading indicators22
initial infected22
interaction rate21
risk score21
dynamical density21
simple sir21
disease control21
case fatality21
plastic surgeons21
early warning21
first case21
classic sir21
maximum number21
infected nodes21
numerical solution21
compartmental model21
disease spreading21
standard deviation21
cost function21
expected number21
health care21
cumulative number20
maximum likelihood20
endemic prevalence20
exponential decay20
panel data20
mean field20
time interval20
disease models20
second term20
case study20
main text20
control strategies20
space model20
intensive care20
compartment models20
initial values20
extended sir20
european countries20
jumping outside20
given time20
social network20
data collection20
confidence interval19
modeling infectious19
influential spreaders19
system size19
i ic19
allows us19
different types19
dear sir19
publicly available19
early phase19
initial value19
value function19
modelling study19
epidemic outbreak19
early detection19
get infected19
stochastic differential19
optimal policy19
differential evolution19
change points19
epidemic processes19
steady state19
initial exponential19
dynamical systems19
restriction ratio19
healthcare system19
social media19
information diffusion19
population density19
population will19
state variables18
covid cases18
class i18
transmission coefficients18
sir system18
see appendix18
decision making18
confidence intervals18
infection numbers18
will also18
mathematical epidemic18
active infections18
based model18
free energy18
us consider18
quarantine efficiency18
lockdown period17
contact network17
infection cases17
probability distribution17
shortest path17
hcd model17
periphery structure17
model assumes17
first term17
short time17
compartment model17
removed cases17
lockdown policy17
upper bound17
containment measures17
di dt17
free equilibrium17
reopening phase17
immunity threshold17
infectious periods17
random variables17
present work17
epidemic outbreaks17
sample mean17
inflection point17
dynamic system17
social interactions17
infection fatality17
logistic growth17
model predictions17
effective reproductive17
large population17
tested positive16
continuous time16
free parameters16
epidemic disease16
two parameters16
modified sir16
reduce covid16
infection curves16
model predicts16
systematic review16
neural networks16
control input16
incidence rate16
first reported16
spatial heterogeneity16
reproduction numbers16
health system16
isolation control16
face masks16
effective transmission16
two different16
variability measure15
similar results15
dsir model15
central locations15
one may15
randomly selected15
reproduction ratio15
virus spread15
well known15
asymptomatic individuals15
published data15
infected node15
contact restrictions15
hand trauma15
size expansion15
small number15
network structure15
multiple locations15
death cases15
containment strategies15
results obtained15
special case15
critical transitions15
spreading rate15
probability density15
lancet infectious15
data set15
carlo simulations15
boundary conditions15
las curvas15
long time15
first two15
epidemic process15
sir epidemiological15
two groups15
tax policy15
healthcare demand15
model based15
diffusion patterns15
objective optimization15
syndrome coronavirus15
susceptible class14
hmf prediction14
reported rate14
disease outbreak14
mechanistic model14
least one14
global stability14
exact solution14
mean duration14
recorded data14
case data14
initial time14
results show14
vaccine administration14
disease systems14
urban environments14
free networks14
normal distribution14
varying parameters14
table shows14
true mean14
wound healing14
cases will14
brownian motion14
actual number14
following system14
mean square14
go back14
mechanistic models14
outbreak location14
quote tweets14
corona virus14
dynamics modelling14
deterministic sir14
likelihood function14
covid pandemic14
modelling approach14
individuals become14
tailed distribution14
limit case14
master equation14
exponentially distributed14
remains constant14
degree distribution14
small values14
data available14
time control13
coronavirus pandemic13
even though13
size distribution13
dynamical system13
infection curve13
quarantine measures13
single seed13
average time13
warning signals13
closest location13
periodic modulation13
south africa13
proportion i13
present study13
statistical analysis13
see also13
los valores13
hubei province13
affected countries13
percolation analysis13
economic impact13
peaking time13
quasiperiodic modulation13
susceptible compartment13
turning point13
objective function13
experimental data13
analytical solutions13
density function13
see text13
moral hazard13
control barrier13
average degree13
disease outbreaks13
total cases13
infectious individual13
mathematical epidemiology13
real time13
time delay13
human behavior13
arbitrarily distributed13
multiple seeds13
united kingdom13
function will13
infection growth13
network models13
situation report13
statistical modelling13
data model13
best fit12
day interval12
aggregated data12
allows users12
previous studies12
infectious stage12
coronavirus outbreak12
hand side12
different strategies12
individuals may12
first one12
analytical mechanics12
systematic reviews12
present paper12
time spent12
almost surely12
agents assigned12
sis epidemic12
daily data12
ongoing covid12
march th12
three states12
ebola virus12
initial phase12
early stages12
rate parameter12
cases data12
three compartments12
contact group12
least squares12
stochastic models12
posted september12
transition point12
carlo simulation12
interval estimations12
time dependence12
reopening policies12
different models12
epidemic growth12
newly infected12
moving window12
may also12
rate equations12
information cascades12
model will12
stability analysis12
critical value12
stochastic epidemic12
giant component12
closed population12
systems approaching12
optimal interaction12
initial number12
peripheral locations12
phase ii12
using data12
model using12
forecasting covid12
phase transition12
susceptible state12
percolation transition12
supplementary materials11
numerical identification11
th may11
indigenous populations11
world networks11
approaching elimination11
data sources11
decomposition methods11
moment closure11
mitigation efforts11
spreading rates11
infectious fraction11
infected i11
dependent sir11
numerical solutions11
influenza pandemic11
authors declare11
stochastic control11
journal club11
control strategy11
peak number11
reported case11
new infections11
several countries11
normalized data11
planck equation11
standard errors11
global health11
simple model11
data repository11
rate per11
breast reconstruction11
first derivative11
different time11
two nodes11
infected case11
systems science11
epidemic parameters11
virus disease11
pandemic data11
actual data11
extreme values11
become susceptible11
lockdown policies11
cases reported11
infectious stages11
gaussian filtering11
health policy11
deep learning11
low level11
maximum value11
isolation term11
disease model11
john hopkins11
model used11
diffusion process11
pged regime11
positive cases11
sexually transmitted11
individual countries11
whole population11
infectious state11
reply tweets11
facial masks11
primary cases11
lv system11
death rates11
homogeneous mixing11
birth rate11
population sizes11
significant difference11
secondary cases11
average infectious11
human mobility11
current covid11
constant population11
different locations11
initial outbreak10
among others10
bifurcation delay10
nuclear fusion10
epidemic control10
disease will10
los infectados10
dependent transmission10
imperial college10
change point10
asymptomatic cases10
autofluorescence imaging10
daily basis10
random walk10
infected class10
poisson model10
disease emergence10
stage durations10
analytical expressions10
effective containment10
health systems10
hamiltonian structure10
real networks10
sufficiently large10
parameter space10
para el10
data collected10
per one10
proposed model10
exponential distribution10
coronavirus covid10
time steps10
phase separation10
table presents10
simulation results10
binomial distributions10
large set10
time scale10
large values10
time increment10
mainland china10
en esta10
sir type10
central areas10
jacobian matrix10
cruise ship10
reproductive ratio10
models date10
three countries10
transmission coefficient10
extended phase10
strict lockdown10
one another10
one week10
constant transmission10
effective population10
statistical computing10
using sir10
also observed10
i max10
removed compartment10
large systems10
roc curves10
log i10
selected nodes10
strict social10
see table10
small time10
fractional derivatives10
el tiempo10
currently infected10
modelo sir10
pged model10
emerging infectious10
surge periods10
excess degree10
constant value10
north america10
lagrange multiplier10
bond percolation10
obtained using10
fractional order10
law distributions10
travel restrictions10
density forecasts10
accurate predictions10
different times10
susceptible nodes10
influence maximization10
infect others10
statistical model10
order differential10
benchmark methods10
people will10
first order10
policy makers10
three classes10
blue line10
linear regression10
long term10
statistical methods10
break model10
statistical mechanics10
running cost10
late group10
two weeks10
next section10
world network10
covid epidemic10
every day10
epidemic data10
stochastic processes10
larger number10
solved numerically10
susceptibility measure10
growth curve10
population i9
infection period9
likelihood estimation9
simulation study9
much higher9
barrier functions9
phase i9
unknown inputs9
state configuration9
new coronavirus9
interactive web9
se considera9
chain monte9
previous section9
lyapunov exponent9
important role9
positive correlation9
sample size9
recovered population9
exponential increase9
parameterized sir9
home orders9
risk level9
new jersey9
early transmission9
data used9
series forecasts9
second derivative9
already mentioned9
th percentile9
various countries9
equilibrium state9
fat pad9
model versions9
confirmed covid9
may vary9
networks identifying9
recovered agents9
infectados activos9
stock price9
covid spread9
el modelo9
daily changes9
models used9
time derivative9
webinar series9
phase transitions9
commonly used9
model given9
isolation ratio9
optimal contact9
time markov9
numerical experiments9
considered time9
por lo9
model also9
extended state9
active intervention9
recovery time9
mponce covid9
sierra leone9
unknown parameters9
first moment9
higher values9
high risk9
countries like9
will lead9
lyapunov exponents9
two equations9
interval forecasts9
yp yp9
short period9
numerical method9
infectious compartment9
recovered data9
current number9
epidemic wave9
model equation9
diamond princess9
disease spreads9
data using9
middle east9
existing models9
arrival time9
may th9
stochastic model9
susceptible persons9
table i9
online social9
pandemic will9
slightly different9
esair model9
parameters used9
nonpharmaceutical interventions9
removal rates9
model describes9
northern italy9
statistical models9
one thousand9
may help9
spanish flu9
traditional sir9
epidemic thresholds9
mean number9
incubation time9
contagious individuals9
el panel9
exact analytical9
confirmed case9
harris county9
infectious people9
optimization problems9
prediction intervals9
different ways9
quarantine control9
certain time9
may become9
spreading ability9
un modelo9
much larger9
clinical features9
free network9
growth phase9
model shows9
transmitted diseases9
see section9
control variable9
general public8
time unit8
epidemiology models8
partial differential8
space models8
time horizon8
memoryless system8
global outbreak8
reconstructive surgery8
data sets8
new information8
third phase8
larger radii8
getting infected8
cases reaches8
second equation8
negative correlation8
outbreak prediction8
removed nodes8
numerical methods8
disease prevention8
mean infectious8
individuals will8
infected state8
different scenarios8
mad cow8
tail distribution8
identifying influential8
rates per8
quote tweet8
thousand inhabitants8
coupled ordinary8
single infected8
also consider8
posterior distribution8
delayed sir8
en los8
poisson process8
death toll8
vaccination strategies8
gamma distributions8
geographical locations8
calculations used8
time varying8
epidemic evolution8
geographic distance8
daily fluxes8
finite time8
symplectic matrix8
waiting time8
emergent infectious8
performed using8
compartmental epidemiological8
based approach8
geographical location8
cumulative infection8
data driven8
nodes selected8
model fitting8
plastic surgeon8
one location8
urban areas8
restriction control8
ordinary time8
epidemiological outcomes8
different initial8
bone dust8
will always8
infected compartment8
hybrid machine8
legendre transformation8
confirmed infections8
long history8
fractional differential8
genomics data8
th march8
per location8
epidemic curve8
transportation network8
entre el8
economic activity8
recovered state8
model consists8
es una8
forecast model8
known infectives8
peripheral ones8
starting point8
evolution equation8
york times8
ppe equipment8
exit strategies8
will consider8
early group8
open source8
agent problem8
network model8
temporal evolution8
contact function8
actual covid8
make predictions8
pandemic influenza8
epidemic modeling8
rate function8
icu patients8
hidden model8
extreme sses8
including memory8
bayesian approach8
personal protective8
multiplicative compartments8
social distances8
wear masks8
new virus8
care workers8
scatter plot8
spatial migration8
multiple attractors8
secondary infections8
infection levels8
original tweet8
hospital staff8
slowly changing8
new infection8
tailed distributions8
varying transmission8
daily reported8
main results8
independent cascade8
system approaching8
outlet compartments8
markov process8
i will8
sis models8
sample sizes8
accurately predict8
wide interventions8
epidemiological parameters8
gives rise8
daily number8
much smaller8
los casos8
distribution function8
health measures8
many cases8
contagion probability8
become infectious8
rapid spread8
also show8
recovered people8
initially inside8
statistical inference8
total infections8
second order8
exponential outbreak8
algebraic equations8
equations describing8
day rule8
contact rates8
second phase8
generating function8
using eq8
government interventions8
varying sir8
models based8
model may8
one needs8
take place8
hong kong8
gamma distribution8
previous work8
infection probability8
late dynamics8
intervention strategies8
sir process8
wide range8
com mponce8
may lead8
model described8
del modelo8
references therein8
selected countries8
individuals i8
may occur8
posted april8
infectious time8
will use8
locally tree8
makes sense8
short term8
el valor8
constant rate8
level data8
objective optimal8
model fits7
consider two7
may take7
per time7
left panel7
two cases7
bayesian estimation7
periodic boundary7
spatial interaction7
two distinct7
dimensional model7
model allows7
succeeding text7
universality class7
percolation problem7
pandemic evolution7
global epidemic7
first week7
series solution7
general solution7
required isolation7
contact networks7
sis system7
fit data7
spread parameter7
modified seir7
curve i7
protective equipment7
among individuals7
square displacement7
por el7
las medidas7
sir equations7
among indigenous7
small fraction7
previously described7
around april7
risk assessment7
infections will7
modelling framework7
quarantine policies7
del sistema7
high values7
fixed point7
risk factors7
optimal transmission7
measures implemented7
highly infectious7
dynamical processes7
learning models7
possible options7
bayesian inference7
chemical reactions7
type i7
health services7
sir systems7
affected scale7
becoming infected7
diseases spread7
kinetic model7
prior distributions7
recent covid7
population dynamics7
right panels7
forcing term7
trajectory length7
population biology7
seasonal influenza7
health authorities7
rd may7
field theory7
reporting rate7
social interaction7
much better7
last day7
british association7
trauma clinic7
parameter estimates7
also known7
reported confirmed7
coverage frequency7
simple mathematical7
epidemiological forecast7
pged phase7
order approximation7
th century7
skin cancer7
relatively short7
cow disease7
also note7
stochastic version7
hmf theory7
trauma service7
full sir7
two types7
better understanding7
leading order7
april th7
model provides7
million people7
boundary condition7
distributed infectious7
planar space7
excess free7
population may7
cases i7
certain period7
disease elimination7
cohort study7
small sample7
recovered count7
takes place7
fat tails7
rainforest enclaves7
respiratory disease7
generalized coordinates7
daily contacts7
linear function7
preventive measures7
mass index7
las soluciones7
virus spreads7
healthcare systems7
reported deaths7
starting value7
final affected7
health policies7
time scales7
standard formula7
dimensional phase7
epidemics trend7
mathematical biology7
el caso7
infinite variance7
epidemic diseases7
blue dots7
uncertainty quantification7
right panel7
within days7
containment explains7
semianalytical solutions7
roc curve7
models using7
far away7
world data7
less dense7
guarantee safety7
data function7
threshold point7
gamma distributed7
mean estimates7
step discretisation7
standard expectations7
ar leaflets7
text model7
prior distribution7
hjb equation7
disease data7
coexisting attractors7
high number7
estimated values7
mean squared7
optimal solution7
demographic stochasticity7
las ecuaciones7
across different7
expected value7
second one7
compartmental modeling7
continuous function7
much lower7
local infection7
parametrization model7
panel approach7
first equation7
forecast origin7
exponential phase7
becomes infected7
unique solution7
proposed method7
infected pneumonia7
larger radius7
active infected7
complex models7
visual inspection7
community transmission7
covid analytics7
usual final7
temporal network7
optimal tax7
future infection7
part i7
data dated7
two terms7
final number7
count data7
starting values7
make use7
cellular automata7
lagrange equations7
panel forecasts7
section ii7
right column7
will see7
first step7
optimal effort7
without immigration7
remain constant7
many people7
aggregate infection7
clustering coefficient7
world population7
also shows7
sin embargo7
stochastic sis7
may include7
curves represent7
high level7
control parameter7
column matrix7
phase sensitivity7
spreading process7
birth rates7
lattice site7
squared error7
will occur7
proposed algorithm7
higher compared7
cumulative cases7
population remains7
reusable respirators7
us covid7
finite variance7
data published7
time frame7
mitigation policies7
equal death7
minimal phase7
recovered case7
predictive distribution7
one hand7
hospitalized patients7
first phase7
east respiratory7
early outbreak7
fatality rates7
models fitting7
three different7
also called7
concave function7
closure scheme7
future work7
base locations7
epidemic analysis7
directly measured7
sars coronavirus7
dimensional state7
kinetic equations7
disease modelling7
quadratic program6
sir case6
becomes infectious6
infection starts6
el sistema6
risk groups6
del sur6
fluctuation variance6
current situation6
susceptible node6
time points6
field approximation6
recent studies6
sampling schemes6
optimization process6
data may6
performed tests6
patient information6
software assessing6
accurate prediction6
central limit6
rapidly evolving6
sir rate6
dynamic programming6
will focus6
various phases6
demographic dynamics6
indigenous tribe6
assessing interventions6
kampen detrending6
college covid6
lockdown started6
explicit form6
good choice6
greedy method6
high population6
bayesian framework6
peak covid6
explicit solution6
tribe population6
particularly important6
infected agents6
budding infectious6
european centre6
disease modeler6
los angeles6
multilayer networks6
extensively used6
hygiene measures6
every individual6
model considers6
similar trends6
princess cruise6
also developed6
mean value6
i target6
un tiempo6
prediction uncertainty6
time shift6
models include6
large enough6
prediction models6
like covid6
february th6
track covid6
describes well6
corea del6
interactive figures6
graphs indicate6
chosen initial6
mitigation strategies6
strange nonchaotic6
fractional calculus6
inflection points6
posterior distributions6
deaths per6
optimal controls6
th april6
several studies6
evolution time6
control policy6
political decisions6
lower limb6
carlo methods6
mortality rates6
time moment6
people infected6
normal random6
one important6
inference system6
learning methods6
fusion research6
disease free6
known cases6
equilibrium point6
also allow6
individuals within6
spreading speed6
total mortality6
geo loc6
finite dimensional6
summary statistics6
daily cases6
per country6
green line6
analytics dashboard6
el segundo6
four different6
expected values6
selected node6
will continue6
general case6
possible explanation6
susceptible compartments6
incidence rates6
confidence bands6
initial population6
expected days6
three equations6
results presented6
like environment6
severe cases6
uniform distribution6
second shutdown6
observable states6
one month6
will introduce6
rate increases6
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