This is a list of all the questions and their associated study carrel identifiers. One can learn a lot of the "aboutness" of a text simply by reading the questions.
| identifier | question |
|---|---|
| cord-002806-mu9jt1ul | reveals that transmissible gastroenteritis virus activates the JAK- STAT1 signaling pathway Lymphocyte- mediated immune cytotoxicity in dogs infected with virulent canine distemper virus To kill or be killed: viral evasion of apoptosis Dog distemper: imported into Europe from South America? |
| cord-002085-e7xwb03g | Frontiers in Microbiology| www.frontiersin.org Emergence of dengue virus type 4 genotype IIA in Malaysia Circulation of different lineages of dengue virus type 2 in Central America, their evolutionary time- scale and selection pressure analysis DENVirDB: a web portal of dengue virus sequence information on Asian isolates Dengue- quo tu et quo vadis? |
| cord-003045-r707jl16 | In TCGA Data Using Kraken And Centrifuge Translating RNA sequencing into clinical diagnostics: opportunities and challenges Clinical relevance and public health significance of hepatitis B virus genomic variations Available online at The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data Second- generation PLINK: rising to the challenge of larger and richer datasets VirusSeq: software to identify viruses and their integration sites using next- generation sequencing of human cancer tissue Analysis of Survival Data Next- generation sequencing in clinical virology: discovery of new viruses Human endogenous retrovirus K and cancer: innocent bystander or tumorigenic accomplice? |
| cord-032614-hp07ky6q | example of experimental evolution of parasites? |
| cord-000708-iuo2cw23 | These results indicate that, first of all, it is common for herpesviruses to incorporate cellular proteins into their viral particles and, secondly, that www.frontiersin.org? |
| cord-000708-iuo2cw23 | has multiple functions in gene regulation and cell cycle control and is a prime target for viral manipulation Viruses and the human DEAD- box helicase DDX3: inhibition or exploitation? |
| cord-264071-hg0qslyx | Categorization of the gut microbiota: enterotypes or gradients? |
| cord-276493-hoaxv5e0 | a casepopulation study Anti- HCV, nucleotide inhibitors, repurposing against COVID-19 Are patients with hypertension and diabetes mellitus at increased risk for COVID-19 infection? |
| cord-003207-ow3aez9v | Does the higher order structure of the influenza virus ribonucleoprotein guide sequence rearrangements in influenza viral RNA? |
| cord-284889-hth8nf5b | Premature stop codons in the G glycoprotein of human respiratory syncytial viruses resistant to neutralization by monoclonal antibodies Genetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70 A probable new human picornavirus associated with respiratory diseases Human metapneumovirus: lessons learned over the first decade Rhinovirus replication causes RANTES production in primary bronchial epithelial cells Dual infection of infants by human metapneumovirus and human respiratory syncytial virus is strongly associated with severe bronchiolitis Bronchiolitis- associated hospitalizations among US children Asthma and allergy patterns over 18 years after severe RSV bronchiolitis in the first year of life Asthma and immunoglobulin E antibodies after respiratory syncytial virus bronchiolitis: a prospective cohort study with matched controls Severe respiratory syncytial virus bronchiolitis in infancy and asthma and allergy at age 13 Proposals for the classification of human rhinovirus species C into genotypically assigned types Bronchiolitis to asthma: a review and call for studies of gene- virus interactions in asthma causation Human rhinovirus infection in young African children with acute wheezing Emerging respiratory agents: new viruses for old diseases? |
| cord-277731-thazunob | Can bioactive lipids inactivate coronavirus( COVID-19)? |
| cord-001933-rnjnxymc | Are the'core'proteins of the mitochondrial bc 1 complex evolutionary relics of a processing protease? |
| cord-001933-rnjnxymc | reveals a novel large double- stranded circular DNA virus Managing hytrosavirus infections in Glossina pallidipes colonies: feeding regime affects the prevalence of salivary gland hypertrophy syndrome Hytrosaviridae: a proposal for classification and nomenclature of a new insect virus family Dynamics of the salivary gland hypertrophy virus in laboratory colonies of Glossina pallidipes( Diptera: Glossinidae) Tsetse salivary gland hypertrophy virus: hope or hindrance for tsetse control? |
| cord-271557-xic32wxh | Is CD46 the cellular receptor for measles virus? |
| cord-297662-slmlhqnb | What Do We Know? |
| cord-260336-kwzo8puo | Probable sexual transmission of Zika virus from a vasectomised man Potential effect of Zika virus infection on human male fertility? |
| cord-260336-kwzo8puo | Zika virus: high infectious viral load in semen, a new sexually transmitted pathogen? |
| cord-278540-gy65bvot | The NLRP3 inflammasome: a sensor for metabolic danger? |
| cord-278540-gy65bvot | activation in bronchial cells Antioxidant properties of MitoTEMPOL and its hydroxylamine NLRP3 inflammasome activation: the convergence of multiple signalling pathways on ROS production? |
| cord-300379-db79kb5c | NS3 helicase inhibitors using nucleic acid binding assays Aurintricarboxylic acid inhibits the early stage of vaccinia virus replication by targeting both cellular and viral factors Pathogenesis and molecular mechanisms of zika virus A'furrytale'of zika virus infection: what have we learned from animal models? |
| cord-289623-7oc1ykds | ; Kraemer et al., 2019), leading to the main question for this study: are environmental Serratia species developing broad antimicrobial resistance activities? |
| cord-289623-7oc1ykds | Therefore, one central question arises from the lack of a complete mer operon in strain SRS-8-S-2018-what mechanism(s) render Hg resistance to Serratia marcescens strain SRS-8-S-2018? |
| cord-316537-f5rto51t | serology be abolished in favor of PCR for the diagnosis of Mycoplasma pneumoniae infections? |
| cord-290505-omszep7u | Is there a possibility to reduce the risk of progression from URI to LRI? |
| cord-290505-omszep7u | lower respiratory tract infections in hematopoietic cell transplant recipients DAS181 for treatment of parainfluenza virus infections in hematopoietic stem cell transplant recipients at a single center Evaluation of performance characteristics of panther fusion assays for detection of respiratory viruses from nasopharyngeal and lower respiratory tract specimens Disseminated bocavirus infection after stem cell transplant Timing and severity of community acquired respiratory virus infections after myeloablative versus non- myeloablative hematopoietic stem cell transplantation Human bocavirus: passenger or pathogen in acute respiratory tract infections? |
| cord-324651-8teb5jrn | Could the Inhibition of Endo- Lysosomal Two- Pore Channels( TPCs) by the Natural Flavonoid Naringenin Represent an Option to Fight SARS- CoV-2 Infection? |
| cord-336074-76ca1cfy | How is cathepsin B involved in the HIV-1 Env- induced cell fusion? |
| cord-331973-avjw4kx1 | Specimen requirements: selection, collection, transport, and processing Immunity to and frequency of reinfection with respiratory syncytial virus Specimen collection for the diagnosis of pediatric pneumonia Influence of antibiotics on the detection of bacteria by culturebased and culture- independent diagnostic tests in patients hospitalized with community- acquired pneumonia Traditional and modern cell culture in virus diagnosis Point: is the era of viral culture over in the clinical microbiology laboratory? |
| cord-353454-zq51hpjs | stands Purification, identification and activity of phomodione, a furandione from an endophytic Phoma species Who is in there? |
| cord-317499-mxt7stat | : a case- control study Picornavirus infections: a primer for the practitioner Interferon lambda genetic polymorphisms and viral infection: the tip of the iceberg? |
| cord-343132-qqhivgkq | cell- free culture supernatants modulate chicken macrophage activities Interaction of probiotics and pathogens- benefits to human health? |
| cord-314567-purplsjn | How Parkinson's disease meets nucleolar stress NF90 isoforms, a new family of cellular proteins involved in viral replication? |
| cord-314567-purplsjn | The nucleolus- a gateway to viral infection? |
| cord-295121-4xemmaqt | Can Zn be a critical element in COVID-19 treatment? |
| cord-295121-4xemmaqt | During the SARS- CoV2 Pandemic? |
| cord-295121-4xemmaqt | SARS- CoV-2, bacterial coinfections, and AMR: the deadly trio in COVID-19? |
| cord-298233-qqhgmqrg | ADP- ribose-1"-phosphate dephosphorylation by a conserved domain of nsP3 Assessment of the cross- protective capability of recombinant capsid proteins derived from pig, rat, and avian hepatitis E viruses( HEV) against challenge with a genotype 3 HEV in pigs Is hepatitis E virus an emerging problem in industrialized countries? |
| cord-298233-qqhgmqrg | Does chronic hepatitis E virus infection exist in immunocompetent patients? |
| cord-298233-qqhgmqrg | interacts with the Bbeta chain of fibrinogen resulting in decreased fibrinogen secretion from HuH-7 cells Subcellular localization of hepatitis E virus( HEV) replicase Molecular organization and replication of hepatitis E virus( HEV) Isolation of a cDNA from the virus responsible for enterically transmitted non- A, non- B hepatitis Structural characterization of recombinant hepatitis E virus ORF2 proteins in baculovirus- infected insect cells New models of hepatitis E virus replication in human and porcine hepatocyte cell lines Expression of the hepatitis E virus ORF1 Conservation of the putative methyltransferase domain: a hallmark of the'Sindbis- like'supergroup of positive- strand RNA viruses UK acquired hepatitis E- An emerging problem? |
| cord-344970-ud1lhkyi | Coronavirus replication complex formation utilizes components of cellular autophagy Regulation of cAMP- mediated signal transduction via interaction of caveolins with the catalytic subunit of protein kinase A Membrane rafts in host- pathogen interactions Statins: could an old friend help the fight against COVID-19? |
| cord-344970-ud1lhkyi | The role of lipid metabolism in COVID-19 virus infection and as a drug target Use of statins in patients with chronic Hepatitis C Natural small molecules as inhibitors of coronavirus lipiddependent attachment to host cells: a possible strategy for reducing SARS- COV-2 infectivity? |
| cord-343357-5nhyumxl | Presenting characteristics, comorbidities, and outcomes among 5700 patients hospitalized with COVID-19 in the New York city area Immunosuppression for hyperinflammation in COVID-19: a double- edged sword? |
| cord-343357-5nhyumxl | what can they teach us about the severe acute respiratory syndrome? |
| cord-302928-nnly9ju8 | cancer Assisted evolution enables HIV-1 to overcome a high TRIM5α- imposed genetic barrier to rhesus macaque tropism Editorial: endogenous viral elementslinks between autoimmunity and cancer? |
| cord-302928-nnly9ju8 | first? |
| cord-003327-pad65nww | Could bats have acquired phytoplasmas as part of their microbiome after their divergence into frugivorous and nectivorous bats? |
| cord-003327-pad65nww | Could bats have played a role in the spread of phytoplasmas? |
| cord-003327-pad65nww | Could this data set and the sampling methods established allow us to monitor bats as sentinels of plant pathogens? |
| cord-003327-pad65nww | The IUCN Red List of Threatened Species Candidatus Phytoplasma noviguineense', a novel taxon associated with Bogia coconut syndrome and banana wilt disease on the island of New Guinea Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs Bats and zoonotic viruses: can we confidently link bats with emerging deadly viruses? |
| cord-003327-pad65nww | characterization of the etiological agent of corn stunt disease Tissue distribution of the MERS- coronavirus receptor in bats Dampened STINGdependent interferon activation in bats Should'Candidatus Phytoplasma'be retained within the order Acholeplasmatales? |
| cord-351719-xqmir1ca | Can nanotechnology and materials science help the fight against SARS- CoV-2? |
| cord-351719-xqmir1ca | Consumers Asymptomatic cases in a family cluster with SARS- CoV-2 infection COVID-19, SARS and MERS: are they closely related? |
| cord-000914-d0bk9gu5 | ( b) Does it require the traditional CD36-regulated recruitment of Src- like kinases and subsequent phosphorylation of p38 and ERK MAPK? |
| cord-000914-d0bk9gu5 | A KSHV/ HHV-8 and HIV infection in Kaposi's sarcoma development Kaposi's sarcoma- associated herpesvirus infection promotes invasion of primary human umbilical vein endothelial cells by inducing matrix metalloproteinases Cooperative roles for emmprin and LYVE-1 in the regulation of chemoresistance for primary effusion lymphoma Direct activation of emmprin and associated pathogenesis by an oncogenic herpesvirus Lytic growth of Kaposi's sarcoma- associated herpesvirus( human herpesvirus 8) in culture High incidence of EMMPRIN expression in human tumors Superresolution dissection of coordinated events during malaria parasite invasion of the human erythrocyte Endemic Burkitt's lymphoma: a polymicrobial disease? |
| cord-000914-d0bk9gu5 | EBV ZTA) promoter(s)( e.g., see Figure 3)? |
| cord-000914-d0bk9gu5 | However, our model also raises many significant questions:( a) Does CIDR1α- induced KSHV replication involve mechanisms that overlap with, or distinct from those that support CIDR1α- induced EBV replication( Chene et al., 2007)? |
| cord-000914-d0bk9gu5 | TSP-1? |
| cord-000914-d0bk9gu5 | a case- control study Is volcanic soil a cofactor for classic Kaposi's sarcoma? |
| cord-295240-76ee00i0 | Do you kiss your mother with that mouth? |
| cord-295240-76ee00i0 | In this project, I developed the initial research question of"how does the bacterial population vary between two snow samples from different locations on campus?"and provided several primary and secondary articles about microbiomes, microorganisms often found in snow, and bacterial abundance and diversity. |
| cord-295240-76ee00i0 | Students were also asked,"After completing this course, how has your interest in biological research changed? |
| cord-295240-76ee00i0 | † Big biological data: challenges and opportunities What is bioinformatics? |
| cord-296495-9v0sq8k6 | : what is the role of Mycoplasma pneumoniae? |
| cord-296495-9v0sq8k6 | Mycoplasma pneumoniae infections Mycoplasma pneumoniae CARDS toxin induces pulmonary eosinophilic and lymphocytic inflammation Antibody responses against galactocerebroside are potential stagespecific biomarkers in multiple sclerosis Survey of macrolide- resistant Mycoplasma pneumoniae in children with community- acquired pneumonia in Switzerland Fuchs syndrome associated with Mycoplasma pneumoniae( Stevens- Johnson syndrome without skin lesions) Mycoplasma pneumoniae and mucositis- part of the Stevens- Johnson syndrome spectrum Intrathecal anti- GalC antibodies in Bickerstaff brain stem encephalitis Antibody responses to Mycoplasma pneumoniae: role in pathogenesis and diagnosis of encephalitis? |
| cord-296495-9v0sq8k6 | pathogenetic mechanism Cross- reactive anti- galactocerebroside antibodies and Mycoplasma pneumoniae infections in Guillain- Barré syndrome Is asthma an infectious disease? |
| cord-333309-21czobqy | Another E3 ligase( E3?) |
| cord-333309-21czobqy | Early events during BK virus entry and disassembly The ER translocon and retrotranslocation: is the shift into reverse manual or automatic? |
| cord-333309-21czobqy | I molecules determine their susceptibility to human cytomegalovirus US11-mediated down- regulation Interactions among the major and minor coat proteins of polyomavirus ADAMs and protein disulfide isomerase: the key to regulated cell- surface protein ectodomain shedding? |
| cord-333309-21czobqy | a"molecular gearbox"in the ubiquitin pathway? |
| cord-003261-fz8ucwwm | Do they play non- redundant roles, or do they function in the same way but in different cell types? |
| cord-003261-fz8ucwwm | For example, what role does each of the proteins play and how do they work together mechanistically to activate MDA5? |
| cord-003261-fz8ucwwm | How might these pathways be stimulated pharmacologically? |
| cord-003261-fz8ucwwm | I IFN induction RIG- I- mediated antiviral responses to single- stranded RNA bearing 5'-phosphates Activation of MDA5 requires higher- order RNA structures generated during virus infection Who regulates whom? |
| cord-003261-fz8ucwwm | Is there a role for exosomes in this process? |
| cord-003261-fz8ucwwm | Which molecules might be important for release of viral RNA? |
| cord-330942-x238hq9b | Are the viruses acquired after discharge? |
| cord-330942-x238hq9b | Are these nosocomial acquired viruses, or were these virus already present and giving symptoms after a certain period of time? |
| cord-330942-x238hq9b | Does alloimmunity play a crucial role in lung toxicity? |
| cord-330942-x238hq9b | How do you diagnose progressive viral infection? |
| cord-330942-x238hq9b | Is the poor immune system associated with progressive infection? |
| cord-330942-x238hq9b | Too Little Defense or Harmful Immunity? |
| cord-277400-w7mvk3x4 | It was not detected in any other viral family beside Leviviridae( and only in 0.26% eukaryotic proteomes) and thus could be used to characterize Leviviruses( Leviviridae- like lineage? |
| cord-277400-w7mvk3x4 | Ninth Report of the International Committee on Taxonomy of Viruses Origins and evolution of viruses of eukaryotes: the ultimate modularity The ancient Virus World and evolution of cells Virus evolution: how far does the double beta- barrel viral lineage extend? |
| cord-277400-w7mvk3x4 | Second, only a qualitative assessment of viral diversity( e.g., whether retrotranscribing viruses are likely to be present in samples or not?) seems possible utilizing capsid as taxonomic marker. |
| cord-277400-w7mvk3x4 | Structural comparison of the plant satellite viruses National center for biotechnology information viral genomes project Crystal structure of the top domain of African horse sickness virus VP7: comparisons with bluetongue virus VP7 Does common architecture reveal a viral lineage spanning all three domains of life? |
| cord-277400-w7mvk3x4 | Therefore, more work is required to establish if the capsids from retrotranscribing viruses form independent lineages or just one( i.e., Retrotranscribing- like lineage?). |
| cord-277400-w7mvk3x4 | Together, the major and minor coat proteins( negligible presence in cellular proteomes, Table 1) can perhaps characterize inoviruses( i.e., Inovirus- like lineage?). |
| cord-277400-w7mvk3x4 | What does structure tell us about virus evolution? |
| cord-277400-w7mvk3x4 | new developments Distant mimivirus relative with a larger genome highlights the fundamental features of Megaviridae Common ancestry of herpesviruses and tailed DNA bacteriophages Expression of animal virus genomes Do viruses form lineages across different domains of life? |
| cord-277400-w7mvk3x4 | the concept of the viral'self,"'in Emerging Topics in Physical Virology Structure unifies the viral universe Are viruses a source of new protein folds for organisms? |
| cord-281836-j1r771nq | ( Ace) networks for a Pseudomonas aeruginosa model Antibiotic cycling and antibiotic mixing: which one best mitigates antibiotic resistance? |
| cord-281836-j1r771nq | A global view of antibiotic resistance Is El Nino a long- distance corridor for waterborne disease? |
| cord-281836-j1r771nq | A new antibiotic kills pathogens without detectable resistance Oxford: University of Oxford in Michaelmas term 1832/ by Individual freedom versus collective responsibility: too many rights make a wrong? |
| cord-281836-j1r771nq | Covid-19? |
| cord-281836-j1r771nq | Do we need to put society first? |
| cord-281836-j1r771nq | Present- day mercury resistance transposons are common in bacteria preserved in permafrost grounds since the Upper Pleistocene Wastewater bacterial communities bring together broad- host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes Limited dissemination of the wastewater treatment plant core resistome Could bacteriophages transfer antibiotic resistance genes from environmental bacteria to humanbody associated bacterial populations? |
| cord-281836-j1r771nq | The biological cost of mutational antibiotic resistance: any practical conclusions? |
| cord-281836-j1r771nq | The role of natural environments in the evolution of resistance traits in pathogenic bacteria Natural antibiotic resistance and contamination by antibiotic resistance determinants: the two ages in the evolution of resistance to antimicrobials General principles of antibiotic resistance in bacteria Interactions among strategies associated with bacterial infection: pathogenicity, epidemicity, and antibiotic resistance Predicting antibiotic resistance Beyond serial passages: new methods for predicting the emergence of resistance to novel antibiotics What is a resistance gene? |
| cord-281836-j1r771nq | What and how should we tell travellers about antimicrobial resistance? |
| cord-281836-j1r771nq | a united states perspective Chemical- genetic profiling reveals limited cross- resistance between antimicrobial peptides with different modes of action Global increase and geographic convergence in antibiotic consumption between Extended- spectrum betalactamase- producing Escherichia coli from retail chicken meat and humans: comparison of strains, plasmids, resistance genes, and virulence factors Towards a common definition of global health Abiotic gene transfer: rare or rampant? |
| cord-281836-j1r771nq | integrons and gene cassettes between bacterial species Does the recent growth of aquaculture create antibiotic resistance threats different from those associated with land animal production in agriculture? |
| cord-281836-j1r771nq | the widespread Pseudomonas aeruginosa Sequence Type 175 international high- risk clone through whole- genome sequencing Hospital effluent: a reservoir for carbapenemase- producing Enterobacterales? |
| cord-281836-j1r771nq | turning evolutionary principles into clinical reality Antibiotic resistance and its cost: is it possible to reverse resistance? |
| cord-281836-j1r771nq | what's new? |