This is a table of type bigram and their frequencies. Use it to search & browse the list to learn more about your study carrel.
bigram | frequency |
---|---|
genome sequence | 348 |
rna viruses | 244 |
human genome | 232 |
complete genome | 161 |
genome size | 132 |
genome sequences | 129 |
sequence accession | 129 |
genome sequencing | 126 |
viral genome | 113 |
rna virus | 105 |
viral genomes | 103 |
whole genome | 99 |
amino acid | 88 |
rna recombination | 86 |
mutation rates | 82 |
rna polymerase | 80 |
mutation rate | 80 |
gene expression | 77 |
influenza virus | 76 |
infectious disease | 74 |
genetic diversity | 73 |
virus genomes | 72 |
closely related | 64 |
infectious diseases | 63 |
viral rna | 61 |
sequence data | 61 |
yersinia pestis | 58 |
rna synthesis | 57 |
acute respiratory | 56 |
genome replication | 56 |
coronavirus hku | 54 |
draft genome | 54 |
virus genome | 53 |
reading frames | 53 |
respiratory syndrome | 52 |
public health | 52 |
nucleic acid | 50 |
doc id | 49 |
pallidum subsp | 49 |
cord uid | 49 |
nucleotide sequence | 49 |
comparative genomics | 49 |
genome project | 48 |
dna viruses | 48 |
immune response | 47 |
genetic variation | 47 |
escherichia coli | 47 |
poliovirus rna | 47 |
dna sequences | 47 |
open reading | 46 |
protein coding | 46 |
single nucleotide | 45 |
dependent rna | 45 |
viral proteins | 44 |
genome editing | 44 |
dna sequencing | 42 |
treponema pallidum | 42 |
genetic information | 42 |
gene therapy | 42 |
natural products | 42 |
phylogenetic analysis | 41 |
genome annotation | 41 |
high mutation | 39 |
strand rna | 39 |
rna editing | 39 |
dna sequence | 38 |
genome assembly | 38 |
reference genome | 38 |
additional file | 38 |
stem cells | 37 |
reverse transcriptase | 36 |
rna genomes | 36 |
stranded dna | 35 |
sequence analysis | 35 |
immunodeficiency virus | 35 |
viral replication | 35 |
severe acute | 35 |
disease virus | 35 |
amino acids | 34 |
replication fidelity | 34 |
coding region | 34 |
adenovirus type | 33 |
generation sequencing | 33 |
genome analysis | 33 |
virus type | 33 |
mitochondrial genome | 32 |
host cell | 32 |
gene transfer | 32 |
viral sequences | 32 |
may also | 32 |
sequence alignment | 31 |
coding genes | 31 |
respiratory disease | 31 |
large number | 31 |
genomic data | 31 |
mutation frequency | 30 |
genome patents | 30 |
host genome | 30 |
rna genome | 30 |
virus replication | 29 |
mouth disease | 29 |
reading frame | 29 |
structural proteins | 29 |
sequencing data | 28 |
cd pr | 28 |
human immunodeficiency | 28 |
th century | 28 |
template switching | 28 |
united states | 28 |
coding regions | 27 |
inserted sequences | 27 |
oligonucleotide arrays | 27 |
infl uenza | 27 |
human adenovirus | 27 |
important role | 26 |
defective interfering | 26 |
mitochondrial genomes | 26 |
capsid proteins | 26 |
data set | 26 |
supplementary file | 26 |
bacterial genomes | 26 |
host species | 26 |
viral pathogens | 25 |
recombination events | 25 |
mycobacterium tuberculosis | 25 |
data sets | 25 |
virus evolution | 25 |
crop improvement | 25 |
spectral density | 25 |
host range | 24 |
crispr cas | 24 |
error rate | 24 |
nucleotide sequences | 24 |
bacterial genome | 24 |
fatty acid | 24 |
rna replication | 24 |
drug resistance | 24 |
cell culture | 24 |
comparative analysis | 24 |
acid sequences | 24 |
genomic dna | 24 |
virus particles | 23 |
relative abundance | 23 |
sequencing technologies | 23 |
ancient pathogen | 23 |
mosaic virus | 23 |
genome sizes | 23 |
lethal mutagenesis | 23 |
scientific community | 23 |
genome type | 23 |
immune system | 23 |
staphylococcus aureus | 22 |
rna molecules | 22 |
plasmodium falciparum | 22 |
point mutations | 22 |
genetic recombination | 22 |
stranded rna | 22 |
homologous recombination | 22 |
synonymous mutations | 22 |
classifi cation | 22 |
widely used | 22 |
molecular evolution | 22 |
molecular biology | 22 |
foreign gene | 22 |
throughput sequencing | 22 |
gene finding | 21 |
base pairs | 21 |
evolutionary history | 21 |
genome tiling | 21 |
infected cells | 21 |
west nile | 21 |
highly conserved | 21 |
maximum likelihood | 21 |
quantitative trait | 21 |
hepatitis virus | 21 |
consensus sequence | 21 |
syndrome coronavirus | 21 |
cystic fibrosis | 21 |
pathogenicity islands | 21 |
accession jx | 21 |
secondary structure | 21 |
genetic material | 21 |
hz shx | 20 |
nile virus | 20 |
human health | 20 |
host cells | 20 |
reference strain | 20 |
sequencing projects | 20 |
accession cp | 20 |
human pathogens | 20 |
least one | 20 |
reverse transcription | 20 |
coding sequences | 20 |
common ancestor | 20 |
deleterious mutations | 20 |
ancient dna | 20 |
nucleic acids | 20 |
measles virus | 20 |
reference sequence | 20 |
years ago | 20 |
functional elements | 20 |
expression levels | 20 |
clinical microbiology | 20 |
causative agent | 19 |
comparative genomic | 19 |
genetic variability | 19 |
outer membrane | 19 |
tiling arrays | 19 |
completely sequenced | 19 |
spike protein | 19 |
inserted sequence | 19 |
molecular epidemiology | 19 |
viral genes | 19 |
molecular mechanisms | 18 |
vesicular stomatitis | 18 |
text text | 18 |
positive selection | 18 |
genome organization | 18 |
will also | 18 |
virus infection | 18 |
gene prediction | 18 |
complete genomes | 18 |
core genome | 18 |
black death | 18 |
genome length | 18 |
emerging infectious | 18 |
trans splicing | 18 |
genome evolution | 18 |
entry site | 18 |
pan subsp | 18 |
avian influenza | 18 |
virus particle | 17 |
human dna | 17 |
sequence repeats | 17 |
two different | 17 |
phylogenetic tree | 17 |
genome types | 17 |
sequence information | 17 |
frequency domain | 17 |
dna polymerase | 17 |
national center | 17 |
human host | 17 |
viral diversity | 17 |
coding sequence | 17 |
naturally occurring | 17 |
southern china | 17 |
trait loci | 17 |
molecular basis | 17 |
viral population | 17 |
disease research | 17 |
human disease | 17 |
agronomic traits | 17 |
stomatitis virus | 17 |
copying fidelity | 17 |
viral rnas | 17 |
type species | 17 |
gene families | 17 |
virus population | 17 |
codon usage | 17 |
bacterial species | 17 |
simple sequence | 17 |
gene sequences | 16 |
annotation pipeline | 16 |
salmonella enterica | 16 |
per nucleotide | 16 |
leukemia virus | 16 |
ribosomal entry | 16 |
immune responses | 16 |
viral dna | 16 |
single gene | 16 |
accession jq | 16 |
entire genome | 16 |
dna replication | 16 |
clinical trials | 16 |
genomic sequence | 16 |
nucleotide polymorphisms | 16 |
sars coronavirus | 16 |
high throughput | 16 |
gene products | 16 |
gene insertions | 16 |
nuclear transfer | 16 |
per genome | 16 |
microbial genome | 16 |
genome patenting | 16 |
bioinformatics tools | 16 |
related species | 16 |
infection cycle | 16 |
proteolytic processing | 15 |
arabidopsis thaliana | 15 |
mutant spectrum | 15 |
functional genomics | 15 |
viral infection | 15 |
human population | 15 |
accession number | 15 |
viral sequence | 15 |
also known | 15 |
model organisms | 15 |
wide range | 15 |
foxtail millet | 15 |
wide association | 15 |
density oligonucleotide | 15 |
dna synthesis | 15 |
viruses may | 15 |
sequencing reads | 15 |
insert stability | 15 |
cellular receptor | 15 |
human coronavirus | 15 |
genome segment | 15 |
human microbiome | 15 |
substitutions per | 15 |
pathogen genomes | 15 |
genome projects | 15 |
internal ribosomal | 15 |
gene clusters | 15 |
association mapping | 15 |
sequence similarity | 15 |
give rise | 15 |
takes place | 15 |
infectious agents | 15 |
nonreplicative recombination | 15 |
bronze age | 15 |
fidelity mutants | 14 |
sequence space | 14 |
will allow | 14 |
expressed genes | 14 |
even though | 14 |
vaccine candidates | 14 |
genomic regions | 14 |
foreign genes | 14 |
candidate genes | 14 |
complete nucleotide | 14 |
diarrhea virus | 14 |
genome duplication | 14 |
genomic sequences | 14 |
plant viruses | 14 |
porcine deltacoronavirus | 14 |
protein synthesis | 14 |
error catastrophe | 14 |
genomic selection | 14 |
acid sequence | 14 |
diversity within | 14 |
microbial genomes | 14 |
genome assemblies | 14 |
sequences within | 14 |
listeria monocytogenes | 14 |
nonstructural proteins | 14 |
related viruses | 14 |
oligonucleotide array | 14 |
web server | 14 |
ires elements | 14 |
secondary structures | 14 |
segment reassortment | 14 |
phylogenetic trees | 14 |
genomic rna | 14 |
novel coronavirus | 14 |
eukaryotic genomes | 14 |
population genetic | 14 |
cell lines | 14 |
association studies | 13 |
ssdna viruses | 13 |
binding protein | 13 |
genetic elements | 13 |
hong kong | 13 |
query sequence | 13 |
publicly available | 13 |
sequenced genomes | 13 |
rna polymerases | 13 |
influenza viruses | 13 |
acid substitutions | 13 |
protein content | 13 |
genomic diversity | 13 |
complete virions | 13 |
poliovirus genome | 13 |
high frequency | 13 |
vaccine development | 13 |
intergenic regions | 13 |
long time | 13 |
malaria parasite | 13 |
crossover sites | 13 |
physical genome | 13 |
virus rna | 13 |
capsid protein | 13 |
novo assembly | 13 |
nuclear genomes | 13 |
virus strain | 13 |
large population | 13 |
pallidum strains | 13 |
human herpesvirus | 13 |
different strains | 13 |
transcriptome map | 13 |
bacillus anthracis | 13 |
untranslated region | 13 |
multiple sequence | 13 |
small rnas | 13 |
genetically modified | 13 |
human ascaris | 13 |
genome structure | 13 |
cleavage sites | 13 |
live attenuated | 13 |
genetic engineering | 13 |
interfering particles | 13 |
polymerase fidelity | 13 |
phylogenetic analyses | 13 |
first time | 13 |
rna molecule | 13 |
virus species | 13 |
dna genomes | 13 |
biotechnology information | 13 |
genome data | 13 |
defective genomes | 13 |
ascaris suum | 13 |
will provide | 13 |
synthetic biology | 13 |
genomic analysis | 13 |
viral metagenomics | 13 |
anopheles gambiae | 13 |
sanger sequencing | 12 |
speed breeding | 12 |
lateral gene | 12 |
enterica serovar | 12 |
genome duplications | 12 |
penton base | 12 |
first step | 12 |
copy number | 12 |
see also | 12 |
different species | 12 |
ascaris spp | 12 |
qtl mapping | 12 |
genome segments | 12 |
cell types | 12 |
high levels | 12 |
rna sequences | 12 |
primary structure | 12 |
nonreplicative rna | 12 |
dsdna viruses | 12 |
rna fragments | 12 |
acid residues | 12 |
relative density | 12 |
human populations | 12 |
proteins involved | 12 |
protein domains | 12 |
molecular markers | 12 |
venereal syphilis | 12 |
mitochondrial dna | 12 |
protein sequences | 12 |
nasopharyngeal samples | 12 |
protein expression | 12 |
viral protein | 12 |
large dna | 12 |
two major | 12 |
wide variety | 12 |
rna interference | 12 |
fecal samples | 12 |
per base | 12 |
systems biology | 12 |
cov genomes | 12 |
microbial species | 12 |
ebola virus | 12 |
dna polymerases | 12 |
gene family | 12 |
scale sequencing | 12 |
disease resistance | 12 |
microbial genomics | 12 |
orf ab | 12 |
viral fitness | 12 |
virulence factors | 12 |
classifi ed | 12 |
clinical samples | 12 |
many genes | 12 |
population structure | 11 |
sequencing project | 11 |
plant virus | 11 |
pathogen interactions | 11 |
invertebrate vectors | 11 |
nascent strand | 11 |
error rates | 11 |
transcription factors | 11 |
vaccinia virus | 11 |
structural genomics | 11 |
human body | 11 |
pathogen dna | 11 |
nucleotide substitutions | 11 |
natural product | 11 |
two genes | 11 |
respiratory syncytial | 11 |
sequence typing | 11 |
vast majority | 11 |
biological entities | 11 |
antigenic determinants | 11 |
pathogen genome | 11 |
viral species | 11 |
antigenic sites | 11 |
structural protein | 11 |
many viruses | 11 |
streptococcus agalactiae | 11 |
porcine reproductive | 11 |
another example | 11 |
virus family | 11 |
described earlier | 11 |
genome wide | 11 |
cleavage site | 11 |
single base | 11 |
protein families | 11 |
human enterovirus | 11 |
ascaris lumbricoides | 11 |
new era | 11 |
uenza virus | 11 |
search tool | 11 |
core genes | 11 |
viral infections | 11 |
clinical isolates | 11 |
type iii | 11 |
herpes simplex | 11 |
immunodefi ciency | 11 |
virus polymerase | 11 |
coding rnas | 11 |
viral polymerase | 11 |
population genetics | 11 |
among different | 11 |
antimicrobial resistance | 11 |
drug targets | 11 |
ribosomal slippage | 11 |
reverse genetics | 11 |
protein sequence | 11 |
oryza sativa | 11 |
rna proofreading | 11 |
genomic region | 11 |
genetic basis | 11 |
vice versa | 11 |
subsp pertenue | 11 |
mutator phenotype | 11 |
saccharomyces cerevisiae | 11 |
horizontal gene | 11 |
yet another | 11 |
genome research | 11 |
host genes | 11 |
lateral transfer | 11 |
bioinformatics resource | 11 |
local alignment | 11 |
complete mitochondrial | 11 |
sequence diversity | 11 |
relationships among | 11 |
poliovirus polyprotein | 11 |
neutralization antigenic | 11 |
human viruses | 11 |
different viruses | 11 |
dna fragments | 11 |
viral particles | 11 |
gene regulation | 11 |
nucleotide substitution | 10 |
well known | 10 |
high rate | 10 |
fas ii | 10 |
comparative analyses | 10 |
endogenous retroviruses | 10 |
giant viruses | 10 |
hitting set | 10 |
shotgun sequencing | 10 |
distantly related | 10 |
strains isolated | 10 |
human influenza | 10 |
plant rna | 10 |
highly similar | 10 |
fatty acids | 10 |
biomedical research | 10 |
genomic stability | 10 |
hela cells | 10 |
two species | 10 |
genetic analysis | 10 |
may cause | 10 |
cell type | 10 |
next generation | 10 |
life cycle | 10 |
analysis reveals | 10 |
group ii | 10 |
syncytial virus | 10 |
type poliovirus | 10 |
population size | 10 |
active site | 10 |
sequences using | 10 |
viral populations | 10 |
one hand | 10 |
whole genomes | 10 |
new genome | 10 |
genetic heterogeneity | 10 |
gc content | 10 |
overlapping reading | 10 |
viral mutation | 10 |
respiratory tract | 10 |
host interactions | 10 |
sequencing technology | 10 |
molecular evidence | 10 |
sequence analyses | 10 |
like viruses | 10 |
sequence variation | 10 |
large genomes | 10 |
genetic variations | 10 |
emcv ires | 10 |
rna strand | 10 |
repetitive sequences | 10 |
stress tolerance | 10 |
repeat sequences | 10 |
library preparation | 10 |
protein interactions | 10 |
exon mutator | 10 |
murine leukemia | 10 |
conserved sequences | 10 |
lateral transfers | 10 |
complementary dna | 10 |
junk dna | 10 |
may affect | 10 |
tissue tropism | 10 |
human immunodefi | 10 |
hidden markov | 10 |
gene function | 10 |
evolutionary relationships | 10 |
data generated | 10 |
germ cells | 10 |
parainfluenza virus | 10 |
massively parallel | 10 |
disease outbreaks | 10 |
genome rna | 10 |
craig venter | 10 |
different types | 10 |
recent years | 10 |
near future | 10 |
reference genomes | 10 |
hot spots | 10 |
genome database | 10 |
principal component | 10 |
rna sequence | 10 |
data collection | 10 |
nonstructural protein | 10 |
research institute | 10 |
nucleotide polymorphism | 10 |
genetically engineered | 10 |
simplex virus | 10 |
drug discovery | 10 |
proteins encoded | 10 |
respiratory infections | 10 |
products discovery | 10 |
novel viruses | 10 |
genes present | 10 |
mutational analysis | 10 |
cell line | 10 |
rna structures | 9 |
genome segmentation | 9 |
animal viruses | 9 |
antibiotic resistance | 9 |
dna microarray | 9 |
genes encoding | 9 |
global distribution | 9 |
acid synthesis | 9 |
better understand | 9 |
first two | 9 |
hadv pathogens | 9 |
genetic variants | 9 |
circular dna | 9 |
dpav genome | 9 |
will discuss | 9 |
selection pressure | 9 |
modern day | 9 |
negative selection | 9 |
syndrome virus | 9 |
protective immune | 9 |
multilocus sequence | 9 |
recombination rate | 9 |
human respiratory | 9 |
alignment search | 9 |
linkage analysis | 9 |
minimum hitting | 9 |
population sizes | 9 |
genomes using | 9 |
two strains | 9 |
evolutionary analysis | 9 |
sample metadata | 9 |
powerful tool | 9 |
low frequency | 9 |
two proteins | 9 |
expression vectors | 9 |
recombination event | 9 |
disease informatics | 9 |
binding sites | 9 |
genes responsible | 9 |
sequenced genome | 9 |
wild type | 9 |
mouse hepatitis | 9 |
basic local | 9 |
sequence conservation | 9 |
noncoding sequences | 9 |
window length | 9 |
china complete | 9 |
human adenoviruses | 9 |
bovine viral | 9 |
proviral dna | 9 |
genes related | 9 |
mosquito vector | 9 |
drought tolerance | 9 |
small genome | 9 |
uenza viruses | 9 |
viral gene | 9 |
sense ssrna | 9 |
high fidelity | 9 |
dna microarrays | 9 |
known viruses | 9 |
using genome | 9 |
genome will | 9 |
picornavirus proteins | 9 |
unpublished results | 9 |
eukaryotic viruses | 9 |
known viral | 9 |
point mutation | 9 |
genes involved | 9 |
hepatitis delta | 9 |
sabin strains | 9 |
determine whether | 9 |
repeat unit | 9 |
genome consists | 9 |
noncoding region | 9 |
influenza genome | 9 |
nonhomologous recombination | 9 |
plague pandemic | 9 |
correlation function | 9 |
fi rst | 9 |
type virus | 9 |
pseudomonas aeruginosa | 9 |
rea patterns | 9 |
base pair | 9 |
large numbers | 9 |
uncorrelated background | 9 |
primers lpw | 9 |
sequence alignments | 9 |
polymerase error | 9 |
neisseria meningitidis | 9 |
model organism | 9 |
stem cell | 9 |
group i | 9 |
also found | 9 |
cause disease | 9 |
will enable | 9 |
sequence comparison | 9 |
cov genome | 9 |
reverse transcriptases | 9 |
important roles | 9 |
expression vector | 9 |
different mechanisms | 9 |
di particles | 9 |
synonymous substitutions | 9 |
like virus | 9 |
also possible | 9 |
regulatory elements | 9 |
sindbis virus | 9 |
protein level | 9 |
messenger rna | 9 |
sample preparation | 9 |
streptococcus pneumoniae | 9 |
viral diarrhea | 8 |
different genome | 8 |
hexon genes | 8 |
identified novel | 8 |
conserved regions | 8 |
biological function | 8 |
sequence reads | 8 |
nascent rna | 8 |
available data | 8 |
prediction programs | 8 |
brome mosaic | 8 |
national human | 8 |
target cell | 8 |
poliovirus ires | 8 |
public domain | 8 |
grain protein | 8 |
bacterial pan | 8 |
subsp pallidum | 8 |
caenorhabditis elegans | 8 |
ii system | 8 |
human parainfluenza | 8 |
rice genome | 8 |
picornavirus genome | 8 |
viral communities | 8 |
conserved noncoding | 8 |
ncbi genbank | 8 |
delta virus | 8 |
kb sliding | 8 |
two main | 8 |
will probably | 8 |
data analysis | 8 |
sequencing centers | 8 |
transposable elements | 8 |
progeny virus | 8 |
strand synthesis | 8 |
two sequences | 8 |
evolutionary dynamics | 8 |
iii secretion | 8 |
sequence stability | 8 |
replication machinery | 8 |
dna chips | 8 |
hidden states | 8 |
new opportunities | 8 |
sliding windows | 8 |
antigenic variation | 8 |
cellular dna | 8 |
newly synthesized | 8 |
new viral | 8 |
original variables | 8 |
prior knowledge | 8 |
insect viruses | 8 |
corynebacterium pseudotuberculosis | 8 |
key role | 8 |
comparative sequence | 8 |
recombinant proteins | 8 |
secondary metabolites | 8 |
computational analysis | 8 |
two distinct | 8 |
mutations may | 8 |
spinal cord | 8 |
virus mutation | 8 |
lpw lpw | 8 |
protein vpg | 8 |
animal virus | 8 |
mass spectrometry | 8 |
bronchitis virus | 8 |
encephalomyelitis virus | 8 |
genomes containing | 8 |
worms collected | 8 |
genome mining | 8 |
virus diversity | 8 |
gene duplication | 8 |
dna strands | 8 |
eukaryote genomes | 8 |
haemophilus influenzae | 8 |
sequence length | 8 |
type genome | 8 |
viral vector | 8 |
performed using | 8 |
virus populations | 8 |
bovine respiratory | 8 |
new host | 8 |
porcine circovirus | 8 |
new environment | 8 |
chromosomal dna | 8 |
genetic modification | 8 |
sequence homology | 8 |
genetic robustness | 8 |
rice grain | 8 |
equine rhinovirus | 8 |
infectious cycle | 8 |
molecular cloning | 8 |
unique sequence | 8 |
north america | 8 |
hemorrhagic fever | 8 |
microbial sequencing | 8 |
round primers | 8 |
encephalitis virus | 8 |
east respiratory | 8 |
decision support | 8 |
genomic science | 8 |
specific genes | 8 |
among virus | 8 |
polymerase chain | 8 |
first round | 8 |
dna molecules | 8 |
expressed regions | 8 |
research groups | 8 |
operon structures | 8 |
viral discovery | 8 |
based methods | 8 |
authors declare | 8 |
environmental conditions | 8 |
viral families | 8 |
gene order | 8 |
analysis using | 8 |
vaccine strain | 8 |
may lead | 8 |
species transmission | 8 |
homologous genes | 8 |
infectious bronchitis | 8 |
important factor | 8 |
genbank submission | 8 |
rna secondary | 8 |
also provides | 8 |
research community | 8 |
virus families | 8 |
new data | 8 |
bacterial pathogens | 8 |
noncoding regions | 8 |
murine hepatitis | 8 |
genbank accession | 8 |
small number | 8 |
middle east | 8 |
rapidly lost | 8 |
homologous rna | 8 |
cultured cells | 8 |
human parvovirus | 8 |
international committee | 8 |
subcellular localization | 8 |
three major | 8 |
highly contagious | 8 |
fold increase | 8 |
vibrio cholerae | 8 |
sense rna | 8 |
gel electrophoresis | 8 |
genetic studies | 8 |
big data | 8 |
parental genomes | 8 |
molecular dating | 8 |
complete viral | 8 |
many cases | 8 |
one species | 8 |
host organism | 8 |
better understanding | 8 |
evolutionary process | 8 |
several studies | 8 |
exposed antigens | 8 |
large scale | 8 |
molecular level | 8 |
play important | 8 |
ciency virus | 8 |
alv genome | 8 |
different levels | 8 |
jx usa | 8 |
closest relatives | 7 |
national institutes | 7 |
host genomes | 7 |
similar genome | 7 |
genome engineering | 7 |
junk dnas | 7 |
multicellular organisms | 7 |
dsrna viruses | 7 |
virus variant | 7 |
three serotypes | 7 |
without prior | 7 |
viral nucleic | 7 |
protein gene | 7 |
markov models | 7 |
recent study | 7 |
genetic analyses | 7 |
sequencing costs | 7 |
quality control | 7 |
recombination frequencies | 7 |
limited number | 7 |
genome model | 7 |
early stages | 7 |
will help | 7 |
endemic syphilis | 7 |
plant species | 7 |
genome using | 7 |
biosynthetic gene | 7 |
dna repair | 7 |
selective breeding | 7 |
poliovirus type | 7 |
associated herpesvirus | 7 |
host population | 7 |
linked protein | 7 |
genomic sequencing | 7 |
stationary state | 7 |
new genes | 7 |
host interaction | 7 |
coronavirus genome | 7 |
leader sequence | 7 |
protein structure | 7 |
recombinant viruses | 7 |
pelosinus fermentans | 7 |
constructed using | 7 |
dmid genomes | 7 |
expression data | 7 |
gene duplications | 7 |
start codons | 7 |
high accuracy | 7 |
deletion mutants | 7 |
nonhomologous rna | 7 |
may contain | 7 |
genetic traits | 7 |
vaccine strains | 7 |
living organism | 7 |
based drug | 7 |
two decades | 7 |
virion proteins | 7 |
natural history | 7 |
high resolution | 7 |
pathogenic bacteria | 7 |
pathogen discovery | 7 |
unique features | 7 |
microbiome project | 7 |
important human | 7 |
viral diseases | 7 |
genome level | 7 |
currently available | 7 |
mutant viruses | 7 |
high level | 7 |
data integration | 7 |
virus types | 7 |
mutational robustness | 7 |
nervous system | 7 |
regulatory regions | 7 |
newly identified | 7 |
host mirnas | 7 |
mycobacterium massiliense | 7 |
often used | 7 |
structural annotation | 7 |
panarray algorithm | 7 |
rapid evolution | 7 |
multiple times | 7 |
total number | 7 |
sequence identity | 7 |
prokaryotic genomes | 7 |
recurrent mutations | 7 |
epidemiological studies | 7 |
viral genomic | 7 |
dna elimination | 7 |
regulatory sequences | 7 |
ssrs relative | 7 |
selective pressures | 7 |
prone replication | 7 |
gene silencing | 7 |
competing interests | 7 |
temporal signal | 7 |
histone modifications | 7 |
disease diagnosis | 7 |
new drugs | 7 |
genomic islands | 7 |
functional annotation | 7 |
probe targets | 7 |
virus biology | 7 |
type i | 7 |
highly variable | 7 |
mammalian cells | 7 |
cell tropism | 7 |
applied biosystems | 7 |
nt long | 7 |
encephalomyocarditis virus | 7 |
ssrs content | 7 |
viral family | 7 |
texttext text | 7 |
data sharing | 7 |
based approaches | 7 |
must also | 7 |
high genetic | 7 |
mycoplasma genitalium | 7 |
genome dna | 7 |
stop codons | 7 |
vaccine design | 7 |
one probe | 7 |
negative strand | 7 |
human genes | 7 |
intellectual property | 7 |
usa proc | 7 |
microarray data | 7 |
related virus | 7 |
text texttext | 7 |
mapping population | 7 |
rna genes | 7 |
genome identification | 7 |
ascaris genome | 7 |
one genome | 7 |
viral metagenomes | 7 |
growth properties | 7 |
antiviral drugs | 7 |
genomic era | 7 |
immune evasion | 7 |
new technologies | 7 |
will lead | 7 |
commonly used | 7 |
population dynamics | 7 |
neutralizing antibodies | 7 |
vector biology | 7 |
random sequencing | 7 |
phylogenetic placement | 7 |
low rate | 7 |
advantageous mutations | 7 |
cellular life | 7 |
global health | 7 |
north american | 7 |
exonuclease activity | 7 |
sequencing consortium | 7 |
tobacco mosaic | 7 |
several genes | 7 |
see chap | 7 |
circulating strains | 7 |
year old | 7 |
per day | 7 |
coding potential | 7 |
gene sequence | 7 |
conserved domains | 7 |
genome browser | 7 |
genome plasticity | 7 |
common cold | 7 |
serovar typhi | 7 |
climate change | 7 |
drosophila melanogaster | 7 |
polymerase ii | 7 |
deep sequencing | 7 |
acid substitution | 7 |
free system | 7 |
avian infectious | 7 |
attenuated virus | 7 |
genomic features | 7 |
multiple genome | 7 |
genomic resources | 7 |
freely available | 7 |
dengue virus | 7 |
much smaller | 7 |
per year | 7 |
neutral mutations | 7 |
coverage depth | 7 |
world health | 7 |
genetic stability | 7 |
pestis genomes | 7 |
fourier spectral | 7 |
capsid precursor | 7 |
two groups | 7 |
cellular factors | 7 |
enveloping curve | 7 |
three genes | 7 |
expression profiles | 7 |
ribosomal protein | 7 |
viral rdrp | 7 |
candidate gene | 7 |
nsp exon | 7 |
hidden state | 7 |
ht sequencing | 7 |
molecular breeding | 7 |
transgenic animal | 7 |
ribosome entry | 7 |
two genera | 7 |
innate immunity | 7 |
genome structures | 7 |
virus taxonomy | 7 |
relatively small | 7 |
genome comparisons | 7 |
among viruses | 7 |
provides insights | 7 |
human gene | 7 |
genomes sequenced | 7 |
broad institute | 7 |
exon activity | 7 |
recombinant dna | 7 |
public databases | 7 |
uncultivated viruses | 7 |
internal ribosome | 7 |
reference sequences | 7 |
segmented genomes | 7 |
given rise | 7 |
probe length | 7 |
least two | 7 |
wide analysis | 7 |
endoparasitic wasps | 7 |
gov dmid | 7 |
stochastic fluctuations | 7 |
much larger | 7 |
clinically relevant | 7 |
strain dg | 7 |
somni genome | 7 |
genome stability | 7 |
diversity across | 7 |
somatic cell | 7 |
drug development | 7 |
com proj | 7 |
respiratory samples | 7 |
data will | 7 |
phylogenetic relationships | 7 |
innate immune | 7 |
computational gene | 7 |
trna genes | 7 |
plague foci | 6 |
genbank database | 6 |
sonfela circovirus | 6 |
reference database | 6 |
passive lateral | 6 |
zoster virus | 6 |
may provide | 6 |
inserted gene | 6 |
pallidum subspecies | 6 |
binding domain | 6 |
genomic loci | 6 |
early studies | 6 |
reads per | 6 |
crop species | 6 |
experimental evolution | 6 |
genes may | 6 |
well understood | 6 |
associated coronavirus | 6 |
current study | 6 |
accession jn | 6 |
avian coronavirus | 6 |
small insertions | 6 |
gene editing | 6 |
array design | 6 |
current genome | 6 |
authors thank | 6 |
bubonic plague | 6 |
cis elements | 6 |
considered agents | 6 |
parainfl uenza | 6 |
resource centers | 6 |
host dna | 6 |
biological systems | 6 |
ascovirus origin | 6 |
evolutionary origins | 6 |
disease genomics | 6 |
epidemic diarrhea | 6 |
drug design | 6 |
membrane protein | 6 |
nucleotide positions | 6 |
prokaryotic genome | 6 |
infectious virus | 6 |
new viruses | 6 |
length genome | 6 |
etiological agent | 6 |
cellular proteins | 6 |
gene transfers | 6 |
structural relationships | 6 |
ssrs abundance | 6 |
cell surface | 6 |
ssr markers | 6 |
rnadependent rna | 6 |
knowledge base | 6 |
cooperative interactions | 6 |
resource center | 6 |
mathematical model | 6 |
also contains | 6 |
recombinant virus | 6 |
infected host | 6 |
fasta file | 6 |
random drift | 6 |
highly repetitive | 6 |
analysis tools | 6 |
new genomic | 6 |
central nervous | 6 |
wgs data | 6 |
monoclonal antibody | 6 |
different viral | 6 |
mutations per | 6 |
coding gene | 6 |
oligonucleotide probes | 6 |
short sequences | 6 |
genome patent | 6 |
quasispecies diversity | 6 |
dating analysis | 6 |
natural host | 6 |
best adapted | 6 |
genome program | 6 |
poliovirus vaccine | 6 |
novel expressed | 6 |
two genomes | 6 |
animal mitochondrial | 6 |
replication strategies | 6 |
well suited | 6 |
two nasopharyngeal | 6 |
relatively large | 6 |
genetic changes | 6 |
genomic segments | 6 |
homozygous snps | 6 |
fitness cost | 6 |
century ce | 6 |
endemic regions | 6 |
barr virus | 6 |
selective advantage | 6 |
tract infections | 6 |
based genome | 6 |
two parental | 6 |
canine distemper | 6 |
see methods | 6 |
present study | 6 |
natural selection | 6 |
complex genomes | 6 |
virus proteins | 6 |
genome comparison | 6 |
genetic factors | 6 |
different regions | 6 |
durum wheat | 6 |
human diseases | 6 |
viral evolution | 6 |
pathogenicity island | 6 |
ribosomal rna | 6 |
ssrs length | 6 |
vertebrate genomes | 6 |
association study | 6 |
coronavirus genomes | 6 |
computational analyses | 6 |
repeated sequences | 6 |
insertions will | 6 |
membrane proteins | 6 |
viruses also | 6 |
merkel cell | 6 |
recombination rates | 6 |
year plan | 6 |
replicative ability | 6 |
san diego | 6 |
metagenomic analysis | 6 |
bulk metagenomes | 6 |
malaria genome | 6 |
national institute | 6 |
repetitive dna | 6 |
increased fidelity | 6 |
experimental data | 6 |
south america | 6 |
substitution rate | 6 |
animal models | 6 |
virus genetic | 6 |
human rhinovirus | 6 |
pathogen screening | 6 |
genetic organization | 6 |
picornavirus genomes | 6 |
niaid category | 6 |
picornavirus infections | 6 |
machine learning | 6 |
individual genes | 6 |
previously unknown | 6 |
alu elements | 6 |
expressed sequence | 6 |
relational database | 6 |
switch recombination | 6 |
automated annotation | 6 |
resequencing arrays | 6 |
hku strains | 6 |
coronavirus rna | 6 |
federal agencies | 6 |
default parameters | 6 |
germline cells | 6 |
various types | 6 |
many different | 6 |
acid biosynthesis | 6 |
genetic structure | 6 |
molecular marker | 6 |
enzymatic activities | 6 |
ichnovirus genomes | 6 |
integration sites | 6 |
another template | 6 |
porcine epidemic | 6 |
polioviral rna | 6 |
human metapneumovirus | 6 |
progeny genomes | 6 |
may allow | 6 |
tandem repeats | 6 |
quantitative traits | 6 |
transmission events | 6 |
error threshold | 6 |
population diversity | 6 |
ancient human | 6 |
animal genomes | 6 |
new insights | 6 |
viral disease | 6 |
microbial pan | 6 |
analyzed viruses | 6 |
viable genomes | 6 |
vesicle vaccine | 6 |
scale sequence | 6 |
gua hc | 6 |
genetics analysis | 6 |
streptococcus mutans | 6 |
throughput genotyping | 6 |
surface proteins | 6 |
poliovirus replication | 6 |
disease caused | 6 |
genetic code | 6 |
mutation frequencies | 6 |
genome array | 6 |
organisms including | 6 |
relatively recent | 6 |
genetic data | 6 |
genomic fragments | 6 |
shed light | 6 |
proofreading mechanisms | 6 |
assisted breeding | 6 |
cell epitopes | 6 |
species may | 6 |
complete dataset | 6 |
wide data | 6 |
growth rate | 6 |
mammalian viruses | 6 |
chain reaction | 6 |
correct reference | 6 |
probe reuse | 6 |
trait discovery | 6 |
viral origin | 6 |
spontaneous mutation | 6 |
one gene | 6 |
identify novel | 6 |
trypanosoma brucei | 6 |
three different | 6 |
rna segments | 6 |
many species | 6 |
pathogenic properties | 6 |
complementary strand | 6 |
homoplasic sites | 6 |
usa ak | 6 |
variant sites | 6 |
venter institute | 6 |
horizontal transfer | 6 |
pathogenic potential | 6 |
developing new | 6 |
guangdong province | 6 |
large genome | 6 |
malaria control | 6 |
computational methods | 6 |
ascovirus genomes | 6 |
tiling array | 6 |
transcription factor | 6 |
seq based | 6 |
cell factories | 6 |
gastrointestinal tract | 6 |
hybridization signal | 6 |
disease progression | 6 |
influenza sequence | 6 |
protein structures | 6 |
yeast genome | 6 |
ancient microbial | 6 |
fusion protein | 6 |
strain diversity | 6 |
mrna editing | 6 |
computational biology | 6 |
read sequencing | 6 |
may result | 6 |
domestic cats | 6 |
short time | 6 |
new world | 6 |
within species | 6 |
sequences inserted | 6 |
inserted genes | 6 |
nuclear genome | 6 |
virus variants | 6 |
silico rea | 6 |
novel genes | 6 |
will focus | 6 |
pseudotuberculosis strain | 6 |
foreign dna | 6 |
different geographical | 6 |
initial sequencing | 6 |
term evolution | 6 |
global burden | 6 |
biological information | 6 |
draft sequence | 6 |
small genomes | 6 |
minimum number | 6 |
snp genotyping | 6 |
rna structure | 6 |
significantly higher | 6 |
nucleotide incorporation | 6 |
help us | 6 |
dna genome | 6 |
small rna | 6 |
cluster coxsackieviruses | 6 |
mapped onto | 6 |
pairwise alignment | 6 |
setaria italica | 6 |
regions within | 6 |
pathogenic phenotype | 6 |
somni strain | 6 |
population expansion | 6 |
viruses whose | 6 |
roslin institute | 6 |
pilot project | 6 |
omics alv | 6 |
physical model | 6 |
sequencing methods | 6 |
studies using | 6 |
single reference | 6 |
replicative module | 6 |
highly sensitive | 6 |
genome amplification | 6 |
genome science | 6 |
lower respiratory | 6 |
online version | 6 |
genetic drift | 6 |
artemisinin resistance | 6 |
primary sequence | 6 |
primordial germ | 6 |
emerging diseases | 6 |
raw sequencing | 6 |
embryonic stem | 6 |
novel human | 6 |
using high | 6 |
expression level | 6 |
extended table | 6 |
oligonucleotide microarrays | 6 |
single amino | 6 |
new virus | 6 |
power law | 6 |
viral mrna | 6 |
time series | 6 |
evolutionary genomics | 6 |
molecular clock | 6 |
two segments | 6 |
pcr products | 6 |
references therein | 6 |
germline genome | 6 |
viral polymerases | 6 |
virion rna | 6 |
parasite plasmodium | 6 |
studies suggest | 6 |
critical role | 5 |
invertebrate vector | 5 |
nearly identical | 5 |
type hadv | 5 |
polymerase slippage | 5 |
genetic polymorphisms | 5 |
evolutionary genetics | 5 |
genetic selection | 5 |
chapter discusses | 5 |
partial genome | 5 |
sequence context | 5 |
novel sequence | 5 |
template switch | 5 |
poliovirus serotypes | 5 |
replication complex | 5 |
dicistronic virus | 5 |
animal species | 5 |
density arrays | 5 |
gene region | 5 |
genomic information | 5 |
massiliense strain | 5 |
biological functions | 5 |
completed genome | 5 |
rna replicases | 5 |
analysis showed | 5 |
genome characterization | 5 |
jx tw | 5 |
predicted using | 5 |
raw sequence | 5 |
one example | 5 |
abiotic stress | 5 |
high quality | 5 |
three poliovirus | 5 |
analyzed virus | 5 |
five years | 5 |
new population | 5 |
basic research | 5 |
genetic marker | 5 |
breast cancer | 5 |
plaque passage | 5 |
shared ancestry | 5 |
alternative splicing | 5 |
conserved non | 5 |
future research | 5 |
protein family | 5 |
structural analysis | 5 |
virus vaccines | 5 |
selective pressure | 5 |
ascaris genomes | 5 |
fold higher | 5 |
fitness decrease | 5 |
subgenomic dnas | 5 |
complex traits | 5 |
related strains | 5 |
gene product | 5 |
gene content | 5 |
pathogenic isolates | 5 |
gene cluster | 5 |
genome may | 5 |
almost every | 5 |
sequencing library | 5 |
viruses might | 5 |
distemper virus | 5 |
current status | 5 |
di rnas | 5 |
noncoding sequence | 5 |
highly fragmented | 5 |
conserved within | 5 |
ssrs occurrence | 5 |
nipah virus | 5 |
genetic content | 5 |
command line | 5 |
alignment tool | 5 |
transmission chains | 5 |
rna transcription | 5 |
candida species | 5 |
srna sequences | 5 |
genetic bottleneck | 5 |
larger genome | 5 |
human serum | 5 |
computer science | 5 |
capsular polysaccharides | 5 |
flea vector | 5 |
junk rnas | 5 |
shannon entropy | 5 |
genomes contain | 5 |
subgenomic mrnas | 5 |
african bovine | 5 |
higher mortality | 5 |
hiv aids | 5 |
using rna | 5 |
nucleotide database | 5 |
evidence suggests | 5 |
tissue culture | 5 |
automated sequencing | 5 |
genomes within | 5 |
molecular evolutionary | 5 |
viruses belonging | 5 |
broad range | 5 |
genomic research | 5 |
menb vaccine | 5 |
one template | 5 |
molecular characterization | 5 |
human remains | 5 |
value paradox | 5 |
genomic studies | 5 |
clinical disease | 5 |
four genera | 5 |
metabolic pathways | 5 |
virus genotypes | 5 |
paralytic poliomyelitis | 5 |
putative surface | 5 |
wide identity | 5 |
fever virus | 5 |
plant breeding | 5 |
viral insertions | 5 |
also provide | 5 |
functionally relevant | 5 |
acid synthase | 5 |
read length | 5 |
genomes genome | 5 |
human chromosome | 5 |
viruses use | 5 |
emerging pathogens | 5 |
marker genes | 5 |
particular strain | 5 |
pigs lacking | 5 |
sabin type | 5 |
rubella virus | 5 |
covalently linked | 5 |
raw data | 5 |
cell receptor | 5 |
microsatellite markers | 5 |
zinc finger | 5 |
viral proliferation | 5 |
nucleotide level | 5 |
bioinformatics analysis | 5 |
limited genetic | 5 |
pestis strains | 5 |
dna regions | 5 |
viral subtypes | 5 |
human genetic | 5 |
oligonucleotide probe | 5 |
blast search | 5 |
sequence fragments | 5 |
see text | 5 |
will determine | 5 |
resistance genes | 5 |
strain identification | 5 |
nobel prizes | 5 |
human gut | 5 |
two types | 5 |
short read | 5 |
hox genes | 5 |
error prone | 5 |
replicative machinery | 5 |
become available | 5 |
cell cultures | 5 |
genomic markers | 5 |
ichnovirus genome | 5 |
correct nucleotide | 5 |
tbl asn | 5 |
rna ligases | 5 |
chagas disease | 5 |
host immune | 5 |
different genotypes | 5 |
plaque isolates | 5 |
genome identity | 5 |
determined using | 5 |
dna strand | 5 |
will tend | 5 |
sample processing | 5 |
enabled us | 5 |
genetic relationships | 5 |
single molecule | 5 |
clinical outcomes | 5 |
sra dataset | 5 |
promising target | 5 |
cellular environment | 5 |
transmission cycle | 5 |
viruses infecting | 5 |
second round | 5 |
bioinformatics approach | 5 |
sequence variants | 5 |
target genes | 5 |
antigenic drift | 5 |
mutational load | 5 |
virus sequence | 5 |
multiple strains | 5 |
serial passages | 5 |
genomic rearrangements | 5 |
matrix protein | 5 |
genomic sciences | 5 |
clock model | 5 |
data using | 5 |
different ways | 5 |
average genome | 5 |
may differ | 5 |
cov replication | 5 |
genomic variation | 5 |
pulmonary fibrosis | 5 |
resistant mutants | 5 |
dark matter | 5 |
genome fragments | 5 |
well established | 5 |
much higher | 5 |
experimental conditions | 5 |
dna virus | 5 |
ancient specimens | 5 |
likelihood tree | 5 |
coding dna | 5 |
elucidating genetic | 5 |
large amounts | 5 |
fitness landscape | 5 |
domestic cat | 5 |
genetic complex | 5 |
extremely high | 5 |
biochemical studies | 5 |
genomes project | 5 |
real time | 5 |
genetic maps | 5 |
patent applications | 5 |
human transmission | 5 |
southwestern china | 5 |
vary inversely | 5 |
adaptive value | 5 |
sequencing efforts | 5 |
genomic context | 5 |
genome sciences | 5 |
mammalian species | 5 |
sequences available | 5 |
triticum aestivum | 5 |
foreign orf | 5 |
genome diversity | 5 |
one another | 5 |
tandem repeat | 5 |
highly effective | 5 |
well adapted | 5 |
genome variation | 5 |
second template | 5 |
will become | 5 |
viral integration | 5 |
related traits | 5 |
mutations involved | 5 |
human hosts | 5 |
environmental factors | 5 |
disease control | 5 |
genome editors | 5 |
template copying | 5 |
malaria mosquito | 5 |
identified using | 5 |
murine encephalomyelitis | 5 |
genome structural | 5 |
steps involved | 5 |
functional genomic | 5 |
years later | 5 |
genetic disease | 5 |
highly plastic | 5 |
fever syndromes | 5 |
hendra virus | 5 |
developing countries | 5 |
repeat classes | 5 |
conserved genes | 5 |
bovine adenovirus | 5 |
coding rna | 5 |
regulatory networks | 5 |
recombination within | 5 |
viruses must | 5 |
tw tw | 5 |
corrector activities | 5 |
etiologic agent | 5 |
gene coding | 5 |
rabies virus | 5 |
one strain | 5 |
see table | 5 |
molecular methods | 5 |
common human | 5 |
heart disease | 5 |
endogenous viral | 5 |
dna patents | 5 |
major challenge | 5 |
bacterial pathogen | 5 |
made possible | 5 |
receptor specificity | 5 |
mosquito anopheles | 5 |
computational tools | 5 |
cdna clones | 5 |
moorei entomopoxvirus | 5 |
may occur | 5 |
neutral network | 5 |
fitness values | 5 |
early evolution | 5 |
computational prediction | 5 |
microbial data | 5 |
linkage disequilibrium | 5 |
high probability | 5 |
lorentzian function | 5 |
gut microbiome | 5 |
nucleotide resolution | 5 |
larger genomes | 5 |
attenuated vaccines | 5 |
men endez | 5 |
per gene | 5 |
global population | 5 |
long stretches | 5 |
based approach | 5 |
recombination analysis | 5 |
primer design | 5 |
susceptible host | 5 |
mycobacterium leprae | 5 |
sexual reproduction | 5 |
fruit fly | 5 |
mortality rates | 5 |
recent work | 5 |
health organization | 5 |
species human | 5 |
rna viral | 5 |
research council | 5 |
based gene | 5 |
distance matrix | 5 |
secretion system | 5 |
swine fever | 5 |
virus discovery | 5 |
anopheline mosquitoes | 5 |
protein database | 5 |
coronavirus nonstructural | 5 |
rna strands | 5 |
cell nucleus | 5 |
genetic map | 5 |
results showed | 5 |
identifying potential | 5 |
protein genes | 5 |
finding algorithms | 5 |
neurological disease | 5 |
small fraction | 5 |
mutation may | 5 |
probe set | 5 |
sequence databases | 5 |
simian virus | 5 |
short sequence | 5 |
genomes may | 5 |
will depend | 5 |
attenuation phenotype | 5 |
mainland china | 5 |
bacteriophage phi | 5 |
single probe | 5 |
evolutionary relatedness | 5 |
genetic resistance | 5 |
web site | 5 |
natural conditions | 5 |
available evidence | 5 |
maturation cleavage | 5 |
spike glycoprotein | 5 |
origin influenza | 5 |
regulatory functions | 5 |
experimental approaches | 5 |
rna sequencing | 5 |
enterococcus faecalis | 5 |
poliovirus defective | 5 |
million years | 5 |
family members | 5 |
fiber gene | 5 |
block storage | 5 |
cloverleaf cdpr | 5 |
life forms | 5 |
evolutionary events | 5 |
generation time | 5 |
genetic determinants | 5 |
sequencing machine | 5 |
genomic approaches | 5 |
pathogen database | 5 |
incorrect nucleotide | 5 |
numerous studies | 5 |
improve human | 5 |
engineered virus | 5 |
bacterial fatty | 5 |
genetic diseases | 5 |
dna extraction | 5 |
replication complexes | 5 |
interaction networks | 5 |
programmed dna | 5 |
es cells | 5 |
bacterial gene | 5 |
markov model | 5 |
edited pigs | 5 |
genetic improvement | 5 |
poliovirus receptor | 5 |
like supergroup | 5 |
suum reference | 5 |
developmental stages | 5 |
vaccine candidate | 5 |
amsacta moorei | 5 |
eukaryotic gene | 5 |
genetic change | 5 |
high similarity | 5 |
ii intron | 5 |
viral quasispecies | 5 |
recent advances | 5 |
cleavage products | 5 |
recombination might | 5 |
sendai virus | 5 |
early stage | 5 |
gene encoding | 5 |
large amount | 5 |
transcriptome analysis | 5 |
population passages | 5 |
encoding genes | 5 |
strand template | 5 |
genomic analyses | 5 |
different rna | 5 |
gene discovery | 5 |
nm diameter | 5 |
fungal genome | 5 |
laboratory conditions | 5 |
interfering rnas | 5 |
crystal structure | 5 |
novel protein | 5 |
fidelity mutant | 5 |
three years | 5 |
human pathogen | 5 |
microorganisms considered | 5 |
civ orf | 5 |
severe symptoms | 5 |
virulence genes | 5 |
host factors | 5 |
host defence | 5 |
different groups | 5 |
study describes | 5 |
persistent infection | 5 |
biological research | 5 |
gene organization | 5 |
now available | 5 |
analytical tools | 5 |
microbial diagnostics | 5 |
new tools | 5 |
virus capsid | 5 |
information provided | 5 |
founder genomes | 5 |
associated circoviruses | 5 |
nucleotide identity | 5 |
authors read | 5 |
variable regions | 5 |
functional characterization | 5 |
segmented genome | 5 |
new drug | 5 |
bacterium isolated | 5 |
human infections | 5 |
improvement programmes | 5 |
special case | 5 |
dna rna | 5 |
illumina reads | 5 |
also identified | 5 |
differentially expressed | 5 |
work queue | 5 |
fitness loss | 5 |
genetic loci | 5 |
gene number | 5 |
causative agents | 5 |
multiple alignment | 5 |
heterozygous snps | 5 |
virus rdrp | 5 |
many animal | 5 |
stress resistance | 5 |
expression profiling | 5 |
cancer research | 5 |
genomic material | 5 |
visual inspection | 5 |
human malaria | 5 |
specific mutation | 5 |
salmonella typhimurium | 5 |
biology network | 5 |
microbial evolution | 5 |
cellular enzymes | 5 |
constant rate | 5 |
phylogenetic inference | 5 |
genome contains | 5 |
poliovirus recombinants | 5 |
bovine rotaviruses | 5 |
gave rise | 5 |
human genomes | 5 |
acid composition | 5 |
intergenic region | 5 |
modencode project | 5 |
edited animals | 5 |
single virus | 5 |
kda protein | 5 |
picornavirus rna | 5 |
human cell | 5 |
gene identification | 5 |
also suggested | 5 |
land plants | 5 |
pathogen identification | 5 |
cytoplasmic membrane | 5 |
wellcome trust | 5 |
genome shotgun | 5 |
best match | 5 |
chemical synthesis | 5 |
technological advances | 5 |
annotation transfer | 5 |
worm specimens | 5 |
rdrp gene | 5 |
different modes | 5 |
adaptive immune | 5 |
individual viral | 5 |
polymorphic sites | 5 |
receptor binding | 5 |
dna arrays | 5 |
illumina sequencing | 5 |
influenza pandemic | 5 |
viral annotation | 5 |
multiple viral | 5 |
high density | 5 |
virus serotype | 5 |
epitope prediction | 5 |
based transcriptome | 5 |
demographic conditions | 5 |
start codon | 5 |
coronavirus associated | 5 |
using either | 5 |
conserved sequence | 5 |
one viral | 4 |
prediction methods | 4 |
doublestranded rna | 4 |
environmental changes | 4 |
structural similarities | 4 |
particular disease | 4 |
type ii | 4 |
virus resource | 4 |
pandemic virus | 4 |
based snp | 4 |
replicative capacity | 4 |
transmission dynamics | 4 |
disease symptoms | 4 |
nucleotide alignment | 4 |
mutant spectra | 4 |
human immune | 4 |
francis collins | 4 |
novel proteins | 4 |
genome date | 4 |
final manuscript | 4 |
might therefore | 4 |
heritage foundation | 4 |
malaria parasites | 4 |
recurrent infections | 4 |
made available | 4 |
molecular genetics | 4 |
still unknown | 4 |
viral sirna | 4 |
recurrent selection | 4 |
identifying genetic | 4 |
nodamura virus | 4 |
cause several | 4 |
hemorrhagic conjunctivitis | 4 |
tobacco etch | 4 |
vaccines consisting | 4 |
dispensable genome | 4 |
bone marrow | 4 |
genomic forms | 4 |
leukosis virus | 4 |
clinical sample | 4 |
residual coverage | 4 |
one location | 4 |
klebsiella pneumoniae | 4 |
chn gz | 4 |
proteolytic cleavage | 4 |
data repositories | 4 |
editing reagents | 4 |
disease transmission | 4 |
genome institute | 4 |
successfully expressed | 4 |
variants may | 4 |
serological characterization | 4 |
maximum parsimony | 4 |
inbred lines | 4 |
available genome | 4 |
breeding cycle | 4 |
intertypic poliovirus | 4 |
ph gradient | 4 |
based detection | 4 |
individual nucleotide | 4 |
complete human | 4 |
nonhuman primates | 4 |
species whose | 4 |
develop new | 4 |
disease syndromes | 4 |
also include | 4 |
syphilis spirochete | 4 |
previously reported | 4 |
global perspective | 4 |
segmented rna | 4 |
bootstrap value | 4 |
provide insights | 4 |
low levels | 4 |
dna content | 4 |
biotic stress | 4 |
rapidly growing | 4 |
ab initio | 4 |
ancient genome | 4 |
three groups | 4 |
also revealed | 4 |
lethal mutations | 4 |
virus will | 4 |
particular genome | 4 |
human infection | 4 |
like genes | 4 |
viruses exist | 4 |
different host | 4 |
purifying selection | 4 |
one health | 4 |
becoming increasingly | 4 |
recent common | 4 |
adenosine deaminase | 4 |
replication cycle | 4 |
dimensional structures | 4 |
nonsynonymous mutations | 4 |
data obtained | 4 |
incoming nucleotide | 4 |
production traits | 4 |
signifi cant | 4 |
respiratory pathogen | 4 |
arabidopsis genome | 4 |
target genome | 4 |
targeted enrichment | 4 |
new family | 4 |
electron microscopic | 4 |
genetically stable | 4 |
simple sequences | 4 |
burkholderia cenocepacia | 4 |
data types | 4 |
icosahedral capsids | 4 |
genome composition | 4 |
results indicated | 4 |
will often | 4 |
gene loss | 4 |
range correlations | 4 |
hku may | 4 |
pcr using | 4 |
population level | 4 |
replication machineries | 4 |
rapid identification | 4 |
international human | 4 |
general features | 4 |
biological properties | 4 |
metadata file | 4 |
plasmid prsb | 4 |
etch virus | 4 |
fetal fibroblasts | 4 |
sequence evolution | 4 |
incomplete nascent | 4 |
multiple copies | 4 |
microarray based | 4 |
identified srnas | 4 |
bat coronaviruses | 4 |
capillary electrophoresis | 4 |
wt virus | 4 |
also responsible | 4 |
genes shared | 4 |
error correction | 4 |
proteins vp | 4 |
gene insertion | 4 |
blast results | 4 |
rcs vapid | 4 |
lazy evaluation | 4 |
template rna | 4 |
dna barcoding | 4 |
shigella flexneri | 4 |
eastern europe | 4 |
academic research | 4 |
statistically significant | 4 |
defi ne | 4 |
spanish influenza | 4 |
tools available | 4 |
several variants | 4 |
vaccine vectors | 4 |
hexanucleotide ssrs | 4 |
start sites | 4 |
technological improvements | 4 |
last two | 4 |
rrna gene | 4 |
one million | 4 |
transmissible gastroenteritis | 4 |
human cells | 4 |
mutans gs | 4 |
assisted backcrossing | 4 |
rich repeat | 4 |
often difficult | 4 |
genetic complementation | 4 |
differential gene | 4 |
noncoding rnas | 4 |
approaches based | 4 |
terminal half | 4 |
canine circovirus | 4 |
fastq format | 4 |
evolutionary consequences | 4 |
new species | 4 |
high proportion | 4 |
best hit | 4 |
genomes mscs | 4 |
giving rise | 4 |
luciferase gene | 4 |
cold spring | 4 |
viruses recombination | 4 |
exogenous fatty | 4 |
genomics analysis | 4 |
dynamic nature | 4 |
putative rna | 4 |
fusion proteins | 4 |
new ways | 4 |
small non | 4 |
another study | 4 |
wasp genomes | 4 |
congeneric species | 4 |
scale genotyping | 4 |
cd gene | 4 |
genome browsers | 4 |
three single | 4 |
cell entry | 4 |
overlapping probes | 4 |
long way | 4 |
nt database | 4 |
microbial pathogen | 4 |
average length | 4 |
bacterial dna | 4 |
coronavirus transcription | 4 |
pr cleavage | 4 |
mutant virus | 4 |
lineage iii | 4 |
may reflect | 4 |
will require | 4 |
clinical decision | 4 |
haplotype network | 4 |
generic tools | 4 |
color hues | 4 |
domestic pig | 4 |
human herpesviruses | 4 |
uncharacterized strains | 4 |
sequence capture | 4 |
quality traits | 4 |
typical example | 4 |
largest scaffolds | 4 |
virus survival | 4 |
plant genomes | 4 |
biological material | 4 |
previous study | 4 |
acting elements | 4 |
provide evidence | 4 |
selective disadvantage | 4 |
epitope database | 4 |
repair activity | 4 |
convergent evolution | 4 |
distinct species | 4 |
relatively little | 4 |
prediction software | 4 |
van voorhis | 4 |
oil content | 4 |
national academy | 4 |
progeny viruses | 4 |
endonuclease analysis | 4 |
diversity determines | 4 |
viruses evolve | 4 |
mutator viruses | 4 |
microbial strain | 4 |
strains cq | 4 |
proviral genome | 4 |
diversity analysis | 4 |
economically important | 4 |
parallel sequencing | 4 |
human endogenous | 4 |
abundance among | 4 |
may represent | 4 |
human micrornas | 4 |
genome analyses | 4 |
correlation coefficient | 4 |
chemical properties | 4 |
genomes revealed | 4 |
virulence gene | 4 |
rna silencing | 4 |
internal initiation | 4 |
dicistronic poliovirus | 4 |
including mouse | 4 |
close proximity | 4 |
repeat sequence | 4 |
circular genome | 4 |
population growth | 4 |
data management | 4 |
gene ontology | 4 |
scale analysis | 4 |
sequence heterogeneity | 4 |
unique sequences | 4 |
chemical mutagenesis | 4 |
major clades | 4 |
sequences may | 4 |
related organisms | 4 |
draft genomes | 4 |
ascaris worm | 4 |
relaxed clock | 4 |
complete genomic | 4 |
selection might | 4 |
host pairs | 4 |
predicted genes | 4 |
taxonomic label | 4 |
scat samples | 4 |
tandemly repeated | 4 |
electron microscopy | 4 |
average number | 4 |
insert size | 4 |
double helix | 4 |
insights gained | 4 |
distributed throughout | 4 |
growth conditions | 4 |
rapidly evolving | 4 |
virus dna | 4 |
proteins produced | 4 |
two rna | 4 |
will serve | 4 |
antigenic shift | 4 |
ababaian serratus | 4 |
foreign sequences | 4 |
genomes often | 4 |
basal lineage | 4 |
influenza reveals | 4 |
genomics data | 4 |
dna technology | 4 |
projects may | 4 |
virus may | 4 |
ancient pathogens | 4 |
experimental observations | 4 |
replication rate | 4 |
epidemic keratoconjunctivitis | 4 |
noncoding dna | 4 |
great potential | 4 |
first successful | 4 |
field gel | 4 |
equine encephalitis | 4 |
viral dynamics | 4 |
microsatellite instability | 4 |
poliovirus protein | 4 |
transcriptional activity | 4 |
swine influenza | 4 |
kb group | 4 |
viral mirna | 4 |
disease syndrome | 4 |
biol doi | 4 |
gov genbank | 4 |
joined together | 4 |
protein function | 4 |
replication competent | 4 |
random integration | 4 |
genome alignments | 4 |
genomics approaches | 4 |
highly productive | 4 |
enteric infections | 4 |
many gene | 4 |
seasonal influenza | 4 |
large fraction | 4 |
agrobacterium tumefaciens | 4 |
strain collections | 4 |
pathogenic features | 4 |
biological agent | 4 |
francisella tularensis | 4 |
long ssrs | 4 |
different bacterial | 4 |
genome initiative | 4 |
relatively short | 4 |
cells derived | 4 |
analysis revealed | 4 |
different research | 4 |
reverse vaccinology | 4 |
microarray technologies | 4 |
one mutation | 4 |
replication events | 4 |
motor neurons | 4 |
phylo genetic | 4 |
defense mechanism | 4 |
determines pathogenesis | 4 |
lymphocytic choriomeningitis | 4 |
direct molecular | 4 |
nucleotide change | 4 |
transition probabilities | 4 |
genomes become | 4 |
multiple pathogenic | 4 |
hela cell | 4 |
parental viruses | 4 |
approximately million | 4 |
genetic distance | 4 |
genetic bottlenecks | 4 |
anterior horn | 4 |
single stranded | 4 |
acute hemorrhagic | 4 |
rrna genes | 4 |
publicly accessible | 4 |
may contribute | 4 |
viruses replicate | 4 |
mammalian genomes | 4 |
recombinant forms | 4 |
sequence tags | 4 |
regulatory sequence | 4 |
pathogenic treponemes | 4 |
ancient remains | 4 |
four nucleotides | 4 |
mumps virus | 4 |
ongoing genome | 4 |
bat species | 4 |
artificial chromosomes | 4 |
coding capacity | 4 |
cancer cells | 4 |
sequencing errors | 4 |
recombination frequency | 4 |
cell rnas | 4 |
high performance | 4 |
small sample | 4 |
genomes assembled | 4 |
epigenomic information | 4 |
read archive | 4 |
whose genomes | 4 |
among others | 4 |
large phylogenies | 4 |
high recombination | 4 |
becomes clear | 4 |
new gene | 4 |
cell factory | 4 |
stable transformation | 4 |
property rights | 4 |
selective fabf | 4 |
stop codon | 4 |
polynucleotide chain | 4 |
less likely | 4 |
epithelial cells | 4 |
higher resolution | 4 |
hadv types | 4 |
set problem | 4 |
identify genes | 4 |
copy choice | 4 |
array technology | 4 |
repeat units | 4 |
new hosts | 4 |
current state | 4 |
nested pcr | 4 |
siphophage mp | 4 |
mutation types | 4 |
eukaryotic genome | 4 |
ribosomal proteins | 4 |
several passages | 4 |
latent infection | 4 |
influenzae rd | 4 |
novel circoviruses | 4 |
protein complexes | 4 |
based dna | 4 |
promoter regions | 4 |
dpav orf | 4 |
envelope studded | 4 |
short reads | 4 |
previously described | 4 |
enzymatic activity | 4 |
two adjacent | 4 |
variation among | 4 |
variola virus | 4 |
species including | 4 |
amr genes | 4 |
desirable traits | 4 |
array platform | 4 |
health approach | 4 |
two novel | 4 |
fisheries management | 4 |
study provides | 4 |
genes associated | 4 |
accessory proteins | 4 |
donor cells | 4 |
experimental studies | 4 |
higher levels | 4 |
projects will | 4 |
microarray hybridization | 4 |
drug target | 4 |
effective vaccines | 4 |
global eradication | 4 |
joint genome | 4 |
nsp exoribonuclease | 4 |
studies showed | 4 |
subfamily paramyxovirinae | 4 |
small interfering | 4 |
organ systems | 4 |
new sequencing | 4 |
evolutionary studies | 4 |
synonymous codons | 4 |
antiviral host | 4 |
ncbi taxonomy | 4 |
cov contigs | 4 |
microscope slide | 4 |
high confidence | 4 |
new types | 4 |
microbial world | 4 |
viral system | 4 |
made use | 4 |
metagenomic data | 4 |
data derived | 4 |
vertebrate hosts | 4 |
similar methods | 4 |
genome encodes | 4 |
cytosine residues | 4 |
high morbidity | 4 |
fitness value | 4 |
within viral | 4 |
menb strains | 4 |
like elements | 4 |
antimicrobial agent | 4 |
human chromosomes | 4 |
previous studies | 4 |
genome organizations | 4 |
aedes aegypti | 4 |