trigram

This is a table of type trigram and their frequencies. Use it to search & browse the list to learn more about your study carrel.

trigram frequency
type i ifn468
type i interferon312
hepatitis c virus308
of type i280
i and mda258
innate immune response236
the activation of236
the innate immune218
the expression of212
been shown to201
as well as186
influenza a virus173
the induction of150
activation of the144
in response to140
innate immune responses137
the production of136
type i ifns133
the formation of129
the type i122
has been shown119
the role of118
respiratory syncytial virus117
respiratory syndrome coronavirus112
is essential for104
is required for103
of the rig103
involved in the103
interferon regulatory factor102
severe acute respiratory101
acute respiratory syndrome100
of the viral99
of innate immune94
e ubiquitin ligase92
i ifn production91
the presence of88
in addition to85
innate immune system85
tlr and tlr85
innate immune signaling82
the absence of80
ns and ns80
it has been79
have been shown78
the recognition of75
hek t cells74
and activation of74
of the ifn71
role in the69
in the cytoplasm69
was shown to69
west nile virus68
herpes simplex virus67
the interaction between67
in innate immunity66
antiviral innate immunity66
the interaction of65
of viral rna65
one of the64
the inhibition of64
pattern recognition receptors64
i ifn response64
the regulation of63
structural basis for63
antiviral innate immune63
in the cytosol63
mitochondrial antiviral signaling62
a variety of62
in order to61
production of type60
in the absence60
of the innate60
type i interferons60
has also been58
plasmacytoid dendritic cells57
a role in56
antiviral signaling protein56
shown to be56
cells infected with56
the level of56
to the nucleus56
virus ns protein56
i ifn signaling55
a number of55
induction of type55
strand rna viruses54
is involved in54
immune response to54
been found to53
regulation of the52
east respiratory syndrome52
middle east respiratory52
the activity of51
on the other51
in mammalian cells51
of hepatitis c51
i interferon production51
in the regulation51
leading to the51
porcine epidemic diarrhea51
ubiquitination of rig50
the importance of50
is associated with50
type i and49
the effect of49
in the nucleus49
innate antiviral response49
of the type48
antiviral response by48
found to be48
crystal structure of48
activation of nf48
kato et al48
in infected cells48
a virus ns47
the other hand47
induction of ifn47
members of the47
the development of47
resulting in the46
the cells were46
has been reported46
japanese encephalitis virus46
by hepatitis c46
in this review46
word w j46
epidemic diarrhea virus46
to interact with46
the ability of45
during viral infection45
of interferon regulatory45
is mediated by45
cd t cells45
such as the45
been reported to45
inducible gene i44
have also been44
an important role44
like receptors and44
stress granule formation44
host innate immune44
in contrast to43
the immune response43
is critical for43
tumor necrosis factor43
of the interferon43
structure of the43
member of the42
interacts with the42
is able to42
activation of rig42
also known as42
negative regulation of42
of the host42
are involved in42
activation of irf41
expression of the41
essential for rig41
results in the41
the number of41
by the innate41
recognition by the41
production of ifn41
acts as a40
innate and adaptive40
i ifn induction40
leads to the40
which in turn40
responsible for the40
the function of40
of influenza a40
of rna viruses40
the release of39
innate antiviral responses39
binds to the39
like receptor signaling39
of nucleic acid39
rna polymerase iii39
the rna helicase39
in the recognition38
important role in38
i interferon signaling38
interaction with the38
the meaning of38
associated molecular patterns38
the viral rna38
viral nucleic acids38
the ns protein38
have been identified38
i and iii38
the ubiquitin ligase38
in the activation37
viral replication and37
in the context37
to viral infection37
recognition of viral37
and characterization of37
activated protein kinase37
the context of37
mediated type i37
were transfected with37
rna recognition by37
category c k37
the phosphorylation of37
nucleic acid immunity36
the immune system36
mda and rig36
the recruitment of36
irf and irf36
c virus infection36
of irf and36
of innate immunity35
protein kinase pkr35
inhibits type i35
in the presence35
is responsible for35
the word w35
of the virus35
recognition of rna35
interferon production by35
the transcription of35
mediated antiviral responses35
role of the35
dependent on the35
the n protein35
the adaptor protein35
to type i34
in innate immune34
the ubiquitination of34
the category c34
of mda and34
of the rna34
the most informative34
was found to34
in the rig34
rna sensor rig34
innate immune sensor33
binding to the33
hornung et al33
of viral replication33
in type i33
vesicular stomatitis virus33
antiviral immune responses33
protein kinase r33
the binding of33
i interferon induction33
the ability to33
the replication of33
inhibition of the33
have shown that33
the use of33
are required for32
wang et al32
in cells infected32
associated with the32
well as the32
functions as a32
of the immune32
is activated by32
mhc class i32
due to the32
and degradation of32
were infected with32
play a role32
t cells were32
by the host32
is targeted by32
stranded rna and32
dexd h box32
of the antiviral32
influenza virus infection32
in this study32
ubiquitin ligase trim31
expression of type31
activation of ifn31
of viral infection31
negative regulator of31
by interacting with31
analysis of the31
into the nucleus31
ebola virus vp31
be activated by31
the degradation of31
is dependent on31
ifn production in31
words in the30
the cell surface30
reproductive and respiratory30
have been reported30
in antiviral innate30
rlr signaling pathway30
in the host30
immune responses to30
of innate antiviral30
ifn induction by30
nuclear translocation of30
linked polyubiquitination of30
the case of30
emcv and jev30
porcine reproductive and30
in the induction30
innate immune evasion30
activity of the30
the innate antiviral30
the ifn system30
identification and characterization29
viral rna sensor29
the e ubiquitin29
mediated antiviral signaling29
also been shown29
antiviral signaling by29
human immunodeficiency virus29
rna virus infection29
it is possible29
recognized by rig29
the viral genome29
the control of29
essential for the29
and respiratory syndrome29
most informative words28
the generation of28
mediated by the28
an essential function28
c virus ns28
immune response in28
immune responses in28
to inhibit the28
recognition by rig28
has not been28
degradation of the28
traf and traf28
the host innate28
based on the28
linked ubiquitination of28
components of the28
a member of28
a negative regulator28
in the case28
the ifn response28
the suppression of28
ifn production and27
the identification of27
innate immunity by27
a type i27
required for the27
i signaling by27
induced activation of27
been shown that27
respiratory syndrome virus27
appears to be27
cells were transfected27
of a word27
is possible that27
to induce ifn27
in hek t27
in the innate27
part of the27
mediated activation of27
innate immunity and27
c virus rna27
mda and lgp27
remains to be27
we found that27
addition to the27
and innate immunity27
structural basis of27
the host immune27
inhibition of rig27
to induce the26
yoneyama et al26
a critical role26
response to viral26
virus nonstructural protein26
function of the26
type lectin receptors26
immune response by26
basis for the26
of ns and26
the helicase domain26
to bind to26
some of the26
of the most26
newcastle disease virus26
required for virus26
the fact that26
hepatitis b virus26
interact with the26
be involved in26
dna and rna26
by rna viruses26
the severe acute26
has been demonstrated25
the nucleus and25
the detection of25
understanding of the25
suggesting that the25
to be a25
to the activation25
ligand for rig25
cov and mers25
the association of25
component of the25
a recent study25
of viral proteins25
is important for25
proteins have been25
infected with the25
insights into the25
viruses such as25
the host cell25
essential function in25
single nucleotide polymorphisms25
indicating that the25
regulation of rig25
its interaction with25
as shown in25
our understanding of24
has an essential24
t cells and24
mediated antiviral activity24
as a result24
krug et al24
an antiviral state24
activation of innate24
the antiviral response24
the synthesis of24
of stress granules24
induced innate antiviral24
binding of the24
to the category24
antiviral immune response24
human respiratory syncytial24
i has an24
by the viral24
expression of ifn24
for scientific texts24
activator of transcription24
interferon antiviral response24
rna helicase rig24
i ifn responses24
with the indicated24
for the activation24
the accumulation of24
the lack of24
regulation of innate24
spry domain of24
belongs to the24
and function of24
by binding to24
a series of24
allele of rs24
li et al24
signal transducer and24
is a novel24
host innate immunity24
methylation of the23
end of the23
functions of the23
its ability to23
seems to be23
irf and nf23
transducer and activator23
pichlmair et al23
identified as a23
are responsible for23
according to the23
the meaning space23
the influenza a23
of influenza virus23
have been described23
antiviral responses to23
in patients with23
virus infection and23
of the signaling23
and activator of23
is one of23
response by targeting23
protein in the23
virus replication and23
stat and stat23
domain of trim23
showed that the22
laboratory of genetics22
by retinoic acid22
the mechanism of22
the nucleus to22
linked polyubiquitin chains22
the pathogenesis of22
an adaptor protein22
been identified as22
has been found22
to be the22
formation of the22
in vitro and22
viral rna replication22
of the first22
dependent innate immune22
antiviral activity of22
svv c pro22
it is also22
can be found22
strand rna virus22
repressor domain in22
i ifns and22
saito et al22
of genetics and22
genetics and physiology22
viral rna species22
cytokines and chemokines22
the majority of22
rna in the22
are associated with22
the crystal structure22
induce type i22
present in the22
are recognized by22
is an essential22
by interfering with22
as a negative22
the involvement of21
adaptive immune response21
and the activation21
interferon signaling by21
by type i21
mediated inhibition of21
can also be21
is important to21
translation initiation factor21
the loss of21
ubiquitin ligase is21
has been identified21
and mda signaling21
innate immune receptor21
regulator of rig21
k and k21
ifn production by21
mouth disease virus21
induces type i21
ligase is essential21
critical role in21
i interferon response21
be found in21
a positive regulator21
and nuclear translocation21
helicases in the21
space of meaning21
i ifn and21
and innate immune21
its role in21
in the ifn21
sensing of viral21
ifn regulatory factor21
but not in21
viruses have evolved21
of the ubiquitin21
the e ligase21
is crucial for21
differential roles of21
interaction between rig21
to note that21
mediated innate immune21
are essential for21
upon binding to20
plays a role20
in the antiviral20
of tlr and20
immune signaling by20
of words in20
mediated degradation of20
type iii ifn20
vitro and in20
for innate immune20
these results indicate20
the nlrp inflammasome20
self and non20
increase in the20
roles of mda20
i helicases in20
ring finger protein20
category rig matrix20
and is targeted20
bat cell lines20
ns protein of20
contribute to the20
oshiumi et al20
the cytosol of20
mediated recognition of20
which leads to20
was identified as20
structural and functional20
in which the20
activation and recruitment20
studies suggest that20
cells were lysed20
their ability to20
the ligand for20
the transcription factors20
positive regulator of20
to virus infection20
essential role of20
type iii ifns20
induced by rig20
of rnase l20
expression levels of20
the card domain20
located in the20
to play a20
by viral rna20
critical for the20
the endoplasmic reticulum20
the interferon antiviral20
interfere with the20
signaling pathway in20
of protein synthesis19
polyubiquitination of the19
immune sensing of19
of proinflammatory cytokines19
is necessary for19
recognition of double19
in the production19
adaptive immune responses19
viral infection and19
at the end19
is the ligand19
to be involved19
regulation of interferon19
alpha beta interferon19
the levels of19
and in vivo19
by the proteasome19
of viral nucleic19
induced type i19
virus ns targets19
antiviral responses by19
degradation of irf19
leads to a19
of the transcription19
host antiviral response19
in plasmacytoid dendritic19
signaling by the19
rna is the19
h box rna19
of tlr in19
of the trim19
triphosphate rna is19
the host antiviral19
of meaning for19
viral nucleic acid19
proteasomal degradation of19
the possibility that19
function in double19
known to be19
to the cytoplasm19
virus vp protein19
play an important19
targeted by hepatitis19
cells were infected19
the dexd h19
are able to19
mechanisms by which19
studies have shown19
of the rlr19
domain of the19
effect of ns19
the end of19
with or without19
i or mda19
distinction of self19
caspase activation and19
related to the19
innate antiviral immunity19
domain of rig19
inhibition of ifn19
and adaptive immunity19
yoneyama and fujita19
and type i19
by targeting rig19
cells transfected with18
phosphorylation of irf18
evade recognition by18
the ns a18
been demonstrated to18
protein that activates18
act as a18
a mitochondrial antiviral18
most of the18
activation of pkr18
acting as a18
characterization of mavs18
lead to the18
been reported that18
in the text18
rna recognition and18
phosphorylation of the18
of traf and18
meaning of a18
for the development18
has been described18
the influenza virus18
results showed that18
line of defense18
c virus replication18
activation of type18
been implicated in18
in a cells18
cellular antiviral response18
negatively regulates the18
stranded rna bearing18
antiviral signal activation18
of ube l18
schlee et al18
responses to single18
signaling protein that18
degradation by the18
host immune response18
for viral replication18
a novel mechanism18
on the cell18
o methylation of18
need to be18
irie et al18
a role for18
rna viruses in18
to evade recognition18
is a negative18
innate immunity the18
of the n18
activation of interferon18
to activate rig18
of rlr signaling18
it is important18
results indicate that18
that activates nf18
mechanism by which18
in the formation18
recognition of single18
different types of18
antiviral response through18
cells were seeded18
is an adaptor18
of isg and18
plays an important18
by western blotting18
cell lysates were18
e ligase activity18
for the induction18
virus ns a18
the rna sensor17
meaning for scientific17
first line of17
molecular mechanism of17
of cytokine signaling17
inhibition of interferon17
the course of17
mediated cleavage of17
h n virus17
cd t cell17
the spry domain17
the inhibitory effect17
the distinction of17
of the human17
of the nf17
of protein kinase17
data suggest that17
of the two17
kappab and irf17
informational space of17
signal activation by17
implicated in the17
of beta interferon17
infected with iav17
and melanoma differentiation17
belong to the17
the cleavage of17
cellular and viral17
in t cells17
conflict of interest17
the authors declare17
ubiquitination and degradation17
the cytoplasm of17
to interfere with17
the interferon response17
a family of17
as described above17
to the c17
i and lgp17
box rna helicase17
structural insights into17
mediated induction of17
virus replication by17
immune response and17
the structure of17
proteins involved in17
consistent with the17
the assembly of17
rna viruses to17
foreign nucleic acids17
and iii ifns17
the hepatitis c17
to determine the17
pathway and is17
of transcription factors17
in the c17
semliki forest virus17
rna viruses and17
is induced by17
an essential role17
are known to17
ligase trim to17
inhibitory effect of17
the roles of17
and dendritic cells17
in vitro transcription17
the antiviral activity17
found that the17
i like receptors17
it is not17
by blocking the16
by innate immune16
unanchored polyubiquitin chains16
an adaptor triggering16
the discovery of16
polymorphisms of genes16
and the host16
viral mrna cap16
upon viral infection16
an innate immune16
and adaptive immune16
immune receptor rig16
has been proposed16
immune signaling pathways16
similar to the16
important roles in16
replication and spread16
i activation by16
will be discussed16
the viral mrna16
the card domains16
of the cellular16
in line with16
cardif is an16
of ifn production16
viral and cellular16
results in a16
in the cell16
found in the16
induction of an16
mouse hepatitis virus16
of the irf16
contributes to the16
in a dose16
induced by the16
antiviral pathway and16
of a novel16
in the pathogenesis16
also involved in16
at h p16
rna helicase lgp16
the host viral16
trim to evade16
the transcription factor16
of trim in16
i interferon and16
appear to be16
isg and its16
to suppress the16
in the immune16
recruitment of the16
also been found16
of genes encoding16
adaptor protein in16
early phase of16
thought to be16
acid inducible gene16
serves as a16
phosphorylation of stat16
innate immune recognition16
immune response against16
suppression of rig16
i antiviral pathway16
the signaling cascade16
targets the ubiquitin16
of retinoic acid16
ns targets the16
adaptor triggering rig16
the rna sensors16
is also a16
of the word16
of trims in16
in the human16
suppressor of cytokine16
host viral rna16
expression level of16
to negatively regulate16
in vitro transcribed16
characterization of the16
of the toll16
of the cards16
feedback regulation of16
is the first16
bind to the16
proteins that are16
recognized by the16
were found to16
in viral replication16
modulation of the16
influenza b virus16
pathogen recognition and16
encoded by the16
versus the iav16
terminal domain of15
of nucleic acids15
of positive selection15
and a c15
led to the15
expression of rig15
mavs signaling pathway15
it is likely15
associated with a15
has recently been15
of porcine epidemic15
activity of trim15
ubiquitin ligase rnf15
suggests that the15
is recognized by15
the downstream signaling15
be explained by15
induction by the15
antiviral immunity in15
regulation of antiviral15
finger e ubiquitin15
eukaryotic translation initiation15
not required for15
tbk and ikk15
lu et al15
shown that the15
formation of a15
words in categories15
as described previously15
innate immune sensors15
downstream of the15
is the most15
an e ubiquitin15
replication and transcription15
and or ns15
as found in15
is an important15
viral replication by15
depending on the15
myeloid dendritic cells15
the response to15
and dna viruses15
the site of15
chronic hepatitis c15
informative words in15
structure and function15
the mitochondrial membrane15
reviewed in ref15
by the ubiquitin15
to activate the15
viral genomic rna15
of gene expression15
for activation of15
assembly of the15
activation of tbk15
and inhibition of15
the protein kinase15
mediated signaling by15
shown to inhibit15
response to infection15
virus rna replication15
ablasser et al15
sitosterol on the15
as an antiviral15
stranded rna viruses15
of isg in15
of viral dsrna15
a conformational change15
was reported to15
to that of15
innate antiviral immune15
as a novel15
and tlr are15
recognition receptors and15
translocate to the15
due to its15
i and mavs15
and cell death15
a virus infection15
effector functions of15
in the past15
the phosphorylation and15
yet to be15
interaction of the15
expression of isgs15
be responsible for15
viral rna to15
is represented by15
can be activated15
the evolution of15
is independent of15
induce the expression15
of the influenza15
an immune response15
the observation that15
stranded rna in15
kim et al15
dependent recognition of15
gack et al15
roles in the15
immune responses and15
of severe acute15
is regulated by15
of the text15
shown to bind15
of the protein15
identified as an15
and recruitment domains15
dependent protein kinase15
which is a15
recognition receptors in15
to determine whether15
innate immune pattern15
antiviral defenses through15
a word is15
a vector of14
to rna virus14
signaling role of14
function as a14
host and viral14
of the ctd14
rna and dna14
interaction between trim14
cytosolic dna and14
and the c14
the sensing of14
the word in14
to induce type14
and stress granule14
nucleic acid sensors14
iav control group14
which can be14
stranded rna as14
for each word14
can act as14
production and signaling14
or infected with14
to activate ifn14
functions as an14
not yet been14
beta interferon production14
by the ns14
during virus infection14
in this section14
rna sensor mda14
trim interacts with14
text belongs to14
or absence of14
interaction with mavs14
human dendritic cells14
activation of stat14
dependent innate immunity14
were treated with14
ubiquitination of the14
identified as the14
the adaptive immune14
of cytosolic dna14
production induced by14
binding oligomerization domain14
results suggest that14
positive and negative14
recognition of the14
is a positive14
but not the14
inflammatory cytokines and14
absence of the14
takahasi et al14
a cells were14
of the mammalian14
to inhibit ifn14
resulting in a14
retinoic acid inducible14
syncytial virus nonstructural14
by the influenza14
there is no14
to the production14
supported by the14
are capable of14
of an antiviral14
rna sensors rig14
a set of14
demonstrated that the14
and proinflammatory cytokines14
is sufficient to14
are targeted by14
ectopic expression of14
between trim and14
the viral replication14
a ring finger14
cys and his14
of the ns14
shown to play14
are important for14
by viruses to14
of the cell14
ns and or14
the amount of14
to activate and14
gitlin et al14
followed by the14
more susceptible to14
i interferon pathway14
tbk and irf14
is inhibited by14
of the three14
the early phase14
in human cells14
and it is14
finger antiviral protein14
can be used14
h n influenza14
an increase in14
region of the14
and laboratory of14
an overview of14
of self and14
ifit and ifit14
yang et al14
to evade innate14
to be determined14
innate antiviral defenses14
in complex with14
were shown to14
supplementary figure s14
explained by the14
on the rna14
protein interacts with14
protein has been14
dependent rna polymerase14
helicase domain and14
induction of isg14
it was shown14
the first line14
regulatory factor activation14
interfering with trim14
regulator of the14
like receptor and14
of hundreds of14
shown to induce14
in dendritic cells14
diebold et al14
binding to dsrna14
unfolded protein response14
expression of trim14
suggest that the14
ifn response in14
critical role of14
expression of ns14
is capable of13
involvement of rig13
the rlr pathway13
crucial role in13
rna as contained13
is a key13
role of tlr13
the ifn signaling13
presence or absence13
these data suggest13
of cd t13
in the word13
and regulation of13
interaction between the13
requires short blunt13
specific recognition of13
influenza a viruses13
defenses through a13
of defense against13
proteins in the13
protein is a13
in a cell13
and activates the13
to the n13
these results suggest13
in each category13
activation in the13
a shared repressor13
domain in rig13
the ns proteins13
interferon induction and13
localized in the13
innate immune signalling13
simplex virus type13
triphosphate by rig13
new insights into13
to suppress rig13
into the cytoplasm13
of the adaptor13
rnase l in13
may also be13
be due to13
and viral rna13
word in the13
i and melanoma13
is supported by13
to antagonize ifn13
interacting with the13
seneca valley virus13
the contribution of13
virus c protein13
as a viral13
linked to the13
reported to be13
innate immune receptors13
and type iii13
i ubiquitination and13
of sendai virus13
were seeded in13
induction of the13
and mda are13
s j and13
is expressed in13
trim in the13
cytosolic dna sensor13
ifit family members13
used by viruses13
and in the13
is known to13
as a strategy13
host gene expression13
level of isg13
for type i13
induces the expression13
the impact of13
important for the13
of rna recognition13
the expression levels13
dependent activation of13
of pattern recognition13
ubiquitin e ligase13
serve as a13
c k w13
that can be13
of antiviral innate13
study showed that13
arms race between13
viral rna by13
identification of the13
observed in the13
genes in the13
contained in panhandle13
during viral replication13
i ifn in13
activated by the13
of virus replication13
and cellular antiviral13
shared repressor domain13
during the early13
interferon regulatory factors13
as contained in13
i helicase requires13
with tetratricopeptide repeats13
through a shared13
with the card13
has been recently13
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panhandle of negative13
hemmi et al13
molecular mechanisms of13
translocation of irf13
c protease cleaves13
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a and b13
were incubated with13
virus kato et13
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ifn responses to13
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yellow fever virus13
innate immune sensing13
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viral rna recognition13
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have demonstrated that12
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gao et al12
levels of ifn12
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n protein inhibits12
chen et al12
trim is a12
revealed that the12
eif a phosphorylation12
rna virus replication12
jak stat pathway12
of infected cells12
k w j12
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of herpes simplex12
the present study12
heil et al12
cells in the12
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of antiviral immune12
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kawai et al12
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pattern recognition receptor12
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marques et al11
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irf transcription factor11
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lung epithelial cells11
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weber et al11
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zhao et al11
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alexopoulou et al11
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jiang et al11
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kumar et al11
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liu et al10
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xu et al10
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baum et al10
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wu et al10
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chiu et al10
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honda et al10
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